GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:28:18

Sequence gi568815588f:114838254_115075376 : 237123 bp : 39.98% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4680   4973  294  2  0   70   76   189 0.779  12.18
 1.02 Intr +   5488   5684  197  0  2   58   86    71 0.863   1.19
 1.03 Intr +   7114   7228  115  1  1   93   76    83 0.989   7.13
 1.04 Intr +   7760   7836   77  1  2   60   92    70 0.998   1.99
 1.05 Intr +   7922   8114  193  2  1   66   99   157 0.998  13.17
 1.06 Intr +   8306   8475  170  1  2   63   84   105 0.999   5.42
 1.07 Intr +   8837   8980  144  2  0    5   95   130 0.936   3.88
 1.08 Intr +  10394  10484   91  2  1   36   96    85 0.974   3.18
 1.09 Intr +  16944  17087  144  2  0  124   90     0 0.851   3.36
 1.10 Intr +  22978  23081  104  0  2   77   92   155 0.798  12.85
 1.11 Intr +  23182  23231   50  1  2   86   56    49 0.231  -1.09
 1.12 Intr +  29921  29998   78  0  0  111  105    99 0.352  12.50
 1.13 Intr +  36854  36986  133  0  1   33    5   143 0.346  -0.72
 1.14 Intr +  37976  38246  271  2  1   99   53   138 0.762   8.02
 1.15 Term +  38785  39141  357  0  0   50   43   254 0.594  10.63
 1.16 PlyA +  41185  41190    6                               1.05

 2.00 Prom +  46252  46291   40                              -4.75
 2.01 Init +  47617  47619    3  0  0  109  101     0 0.701   3.45
 2.02 Term +  61237  61368  132  0  0  123   46    91 0.618   5.51
 2.03 PlyA +  61546  61551    6                               1.05

 3.03 PlyA -  61769  61764    6                              -0.45
 3.02 Term -  63118  62813  306  1  0   31   43   275 0.419  11.43
 3.01 Init -  77700  77482  219  0  0   35   91   131 0.290   6.78
 3.00 Prom -  93427  93388   40                              -3.65

 4.00 Prom +  95615  95654   40                              -7.15
 4.01 Init +  99859  99913   55  0  1   82   60    58 0.621   3.90
 4.02 Intr +  99984 100286  303  1  0   31   84   394 0.472  28.94
 4.03 Intr + 104392 104490   99  2  0  100   86    91 0.852   9.26
 4.04 Intr + 112841 112896   56  0  2   69  116    26 0.322   1.28
 4.05 Intr + 121473 121554   82  2  1  116   72    87 0.946   8.19
 4.06 Intr + 132115 132187   73  2  1   56   95    70 0.571   2.05
 4.07 Intr + 136038 136132   95  0  2    4  121    97 0.436   3.29
 4.08 Term + 136870 137126  257  2  2   78   50   233 0.990  13.26
 4.09 PlyA + 139399 139404    6                               1.05

 5.00 Prom + 148692 148731   40                              -2.35
 5.01 Init + 165573 165816  244  2  1   55   28   212 0.238   9.84
 5.02 Intr + 180306 180570  265  1  1   56   80   137 0.011   5.35
 5.03 Intr + 187208 187402  195  2  0   66   38   101 0.023   0.51
 5.04 Intr + 198088 198137   50  1  2   88  100    61 0.079   4.71
 5.05 Term + 200927 201549  623  0  2   85   32   238 0.236  11.49
 5.06 PlyA + 201847 201852    6                              -0.45

 6.05 PlyA - 203155 203150    6                               1.05
 6.04 Term - 204335 204145  191  0  2   41   49   133 0.121   1.33
 6.03 Intr - 204587 204446  142  2  1   77  101   141 0.093  13.31
 6.02 Intr - 209747 209685   63  2  0   27  116    60 0.057   0.70
 6.01 Init - 230368 230288   81  1  0   70   84    63 0.332   5.12

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:114838254_115075376|GENSCAN_predicted_peptide_1|805_aa
NKMKSLASKGVPNVISEDTLKGQDSLSTDTGQSRQPEELSGATGMEQTELEDEPPHQMDH
LSTSLDNLSVTSLPEASVVCPNQDYNLVNSLLNLTRSPDGRIAVKACEGLMLLVSLPEPA
AAKCLTQSTCLCELLTDRLASLYKALPQSVDPLDIETVEAINWGLDSYSHKEDASAFPGK
RALISFLSWFDYCDQLIKEAQKTAAVALAKAVHERFFIGVMEPQLMQTSEMGILTSTALL
HRIVRQVTSDVLLQEMVFFILGEQREPETLAEISRHPLRHRLIEHCDHISDEISIMTLRM
FEHLLQKPNEHILYNLVLRNLEERNYTEYKPLCPEDKDVVENGLIAGAVDLEEDPLFTDI
SPENTLPNQEWLSSSPPATPDHPKNDGKTEVHKIVNSFLCLVPDDAKSSYHVEGTGYDTY
LRDAHRQFRDYCAICLRWEWPGSPKALEKCNLEAAFFEGHFLKVLFDRMGRILDQVVGDL
MLRIQRIQDFTPKLLLVRKRLLGLEPEGPIIDHITLLEGVIVLEEFFQGSPNPRATDQYQ
SVAGWELGCIAGGTAGRSAALDGLSSEGRKAAGGGSAVLQKDCCAAEGLLWILTADGENR
RSPRSAVDQACRSTSSLVLLRPLALSLLMQDLACSCDSSPSSPATGYCSPDSITAQLWCF
RHPTSPPRASVSLSVKWGWYQLPQRVVLRTRLKFCSVYASKRVADTSGQGQTYNELKGAF
TGWNGLRAPLFLEEQSMGSKGVPRPLNSSRVLSLEGDVSKQSLSPLGTAPPEGSGQARVS
KFIQLVGQLEPMQLLQKSRKIWIRY

>gi568815588f:114838254_115075376|GENSCAN_predicted_CDS_1|2418_bp
aataagatgaaatcattggcttccaaaggagtaccaaatgtaatttcagaagatacatta
aaaggtcaggattccttgtcaacagatacaggacagtcccgtcaaccagaggaactatct
ggtgctactggaatggagcaaacagaattggaagatgagcctcctcatcagatggatcac
ctgtccacaagcttggataacctcagtgtcacctcactgccagaggcctcggttgtttgt
ccaaatcaggattacaatttagtgaattctttgttaaatcttactagaagtcctgatggc
agaatagctgtgaaggcatgtgaaggcttgatgctgttagtaagtttgccagagcctgcg
gctgcaaagtgccttacacagagcacttgcttgtgtgaactactgacagacagacttgcc
tccctgtacaaggccctacctcagtcagtggatccgttagatattgaaaccgtggaagca
attaactggggcttggactcatatagtcataaagaagatgcttcagcatttccaggaaaa
cgagccttaatttcatttctttcctggtttgattattgtgatcagctcattaaggaagcc
caaaagactgctgctgttgctcttgccaaagctgttcatgaaagatttttcattggtgtt
atggaacctcaattaatgcaaacttctgagatgggtattctcacatccactgctctgctt
catcgcatcgttcggcaagtgacctctgatgttttgcttcaagaaatggtgttttttatc
cttggagaacagagggaaccagaaactctggcagaaatcagcagacatcctttaaggcat
aggttaattgaacattgtgatcacatatctgatgagataagcataatgacattacgaatg
tttgaacatcttttacaaaaacccaatgagcacattctttacaacttggtcttgagaaat
cttgaagaaagaaattatacagaatataaacctttgtgcccagaagataaagatgtggta
gaaaatggattgatagcaggagcagtagatctggaagaagatccattatttactgacatt
tcaccagaaaacactttgccaaaccaagagtggcttagttcttcacctcctgctactcca
gaccaccccaaaaatgatggaaaaactgaagttcataaaattgtaaatagttttctctgt
ctggtaccggatgacgcaaaatcctcctaccatgttgagggcacaggatatgacacttac
ctccgagacgctcataggcagttccgagactactgtgctatctgcttaagatgggagtgg
cctgggtctccaaaagcattggaaaagtgcaatttagaagctgctttctttgaaggtcat
tttttgaaagtgctgttcgacagaatgggaagaattcttgatcaggttgttggagacctt
atgcttcgaatccagcgtattcaagactttactcccaagcttctgttagtcagaaagcgg
ttacttggtttggaacctgaaggccctattattgaccacatcacactgctagagggtgtg
attgtgttagaagagttctttcaggggtcccccaacccccgggccacagaccagtaccag
tccgtggccggttgggaactgggctgcatagcaggagggactgcaggccgctctgcagcc
ctggatgggctcagttccgagggaaggaaggcggccggcggaggcagtgctgtgctgcag
aaggactgctgtgctgcggaaggactgctgtggattctgactgcagacggggagaacaga
aggtccccaaggagcgctgtggaccaggcatgcaggtccacgtcatctctggtcctgctc
cgacctttggcactgagcctcctaatgcaggatttggcttgttcctgtgacagctccccc
tcatcgcccgcaacagggtactgcagtccagactccatcactgctcagctctggtgcttt
aggcaccccacatcacctccccgagcctcagtttccttatctgtaaaatggggatggtac
caactaccacagagggttgttttaagaacacgtctgaagttttgttctgtttatgcctcc
aagcgtgttgccgacacatccgggcaaggacaaacgtacaacgaactcaagggagctttc
acaggctggaacgggctcagagcacccctgttcttagaggaacaatcaatgggaagcaaa
ggtgtacccaggcctctcaacagttcccgagtgctgtcactggagggcgatgtctccaaa
cagtctctttccccactgggaacggcgccgcccgagggttcaggtcaagcacgagtttcc
aaattcattcaattagtagggcaactggaacccatgcagctccttcagaaatcccgcaaa
atatggatacgctattaa

>gi568815588f:114838254_115075376|GENSCAN_predicted_peptide_2|44_aa
MADVAFMVVRGIPESLMSSKLQAQPKESRWFPQKILGLGSTAHP

>gi568815588f:114838254_115075376|GENSCAN_predicted_CDS_2|135_bp
atggcagacgttgccttcatggtggtaagagggattccagagtctcttatgtcctcaaag
cttcaagctcagccaaaagaatctcgatggtttccacaaaaaatcttgggccttggatca
actgcccacccttga

>gi568815588f:114838254_115075376|GENSCAN_predicted_peptide_3|174_aa
MLLNTLQCIGQPPEQNYPGQNTGTVTAEKLCTSQTVLSEGRIRNFNLLITAQSVISGFKV
IFKPGLLIHQIKQEGILQTLLISAVTVELESIVSSPRCTARTTNSVVELMALSKATALLA
CRCQPTHLPVLVDWFGDPLGVRISSDGFMEWINEDNLRKFVCGIFTNPVRIQDS

>gi568815588f:114838254_115075376|GENSCAN_predicted_CDS_3|525_bp
atgctgctaaacaccttgcaatgcataggacagccccctgaacagaattacccaggccaa
aacaccggtactgttactgctgagaaactgtgcactagtcaaacagtactcagtgaaggg
agaattaggaactttaacctgctaataacagcccaatccgttatttcgggcttcaaagta
atatttaaacctggcctgttgattcatcaaattaagcaggaaggaattttacaaacttta
cttatatcagcagtaacggtggagctggagagtattgtgtcttctccacgctgcacggcg
agaaccaccaacagtgtggtggaacttatggccctttccaaggccacggctcttttggcc
tgcagatgtcagcccacacatctccctgtgcttgtggattggtttggtgatccactgggt
gtcaggatttcttccgatggctttatggaatggatcaatgaggataacctcagaaaattt
gtatgtggaatcttcaccaacccagtaagaattcaggactcttag

>gi568815588f:114838254_115075376|GENSCAN_predicted_peptide_4|339_aa
MDYNSHKSVRPLRSAQLRGLGYKSMAASEAAVVSSPSLKTDTSPVLETAGTVAAMAATPS
ARAAAAVVAAAARTGSEARVSKAALATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAE
AGMPSPEWTKRKKQTLKIGHGGTLDSAARGVLVVGIGSGTKMLTSMLSGSKRYTAIGELG
KATDTLDSTGRVTEEKPYDKITQEDIEGILQKFTGNIMQVPPLRLAIYYVTVNIPDVECG
GGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDIAQSLEHCSSL
FPAELALKKSKPESNEQVLSCEYITLNEPKREDDVIKTC

>gi568815588f:114838254_115075376|GENSCAN_predicted_CDS_4|1020_bp
atggactacaattcccacaagtccgtgcgacctctccgttctgcgcagcttcgcggtctg
ggctacaaaagtatggccgcttctgaggcggcggtggtgtcttcgccgtctttgaaaaca
gacacatcccctgtccttgaaactgcaggaacggtcgcagcaatggctgcgaccccgtca
gcaagggctgcagccgcggtggttgcggccgcggccaggaccggatccgaagccagggtc
tccaaggccgctttggctaccaagctgctgtccttgagcggcgtgttcgccgtgcacaag
cccaaagggcccacttcagccgagctgctgaatcggttgaaggagaagctgctggcagaa
gctggaatgccttctccagaatggaccaagaggaaaaagcagactttgaaaattgggcat
ggagggactctagacagcgcagcccgaggagttctggttgttggaattggaagcggaaca
aaaatgttgaccagtatgttgtcagggtccaagagatatactgccattggagaactgggg
aaagctactgatacactagattctacggggagggtaacagaagaaaaaccttacgataaa
ataacacaagaagatattgaaggcattctacagaaatttactggaaatataatgcaagtg
ccccccctgaggttagcaatttactatgtcactgttaacattccagatgttgaatgtgga
ggaggtttttatatcagaagcttggtcagtgacattggaaaagaactatcttcctgtgcc
aatgtgctagagctgacccgaaccaaacagggaccatttacgctagaagaacatgccctt
cctgaagacaaatggacaattgatgacattgcacagtctcttgagcattgctcatctctt
ttcccagcagagttggcacttaaaaaatcaaaacctgagtctaatgaacaggttttgagc
tgtgaatatataactctaaatgagccaaagagagaagatgatgtaattaagacgtgttga

>gi568815588f:114838254_115075376|GENSCAN_predicted_peptide_5|458_aa
MEELCLMKLHPRGGGGGCSCKNSELPYPDQGPGRAFWRKQPLNCQLIEELYLNSSGSPGL
LFHVHLLALKFEYLQGPESLPAWWPQGSGLCIVAEGFAAEYSSKQSGSCIASYDPTLEST
QHHFRVFYGLKSHKNQPVSRRRNRDHISQLEKGQSHIVIRAYGIRSIAVSQFLRVTIEER
VEMEFRSRSHRSECDIVLKVSTCQCGVSHAVVNHHLSPIMEDLLWASCHMHYKDVVMTAF
PEAKLLVQGKAKGNKQRNLQRTTKTPGLSVMSPSSCSGGGEFGPTQVHVPFSLSDLKQIK
ADQGKLSDDPDRYTDVLQGLGQTFNLTWRDVMLLLDQTLAFNLKNVALATAREFGDTWYL
SQVNDRMTAGERDKVSPGQQAIPSVDPHWDLDSDHWDWSRKHLLTCVLERLRRIRKEPMN
YSMMSTITQEKEESLAFLEWLQEALRKYTPLSPNSLKG

>gi568815588f:114838254_115075376|GENSCAN_predicted_CDS_5|1377_bp
atggaagagctgtgcctaatgaaacttcatccacgtggaggtggaggaggctgcagctgc
aagaactcagagctgccttacccagaccagggaccagggagggctttctggaggaaacag
cctctgaactgccagctgatagaggagctctacctcaactcttctggttccccagggctg
cttttccacgtccatttattggcactgaagtttgaataccttcaggggcccgaaagcctg
ccagcatggtggcctcagggcagtggactctgcatagtggctgaaggcttcgcagctgag
tattccagcaagcaaagtgggagctgtattgcctcatatgacccaaccttggaatccaca
cagcatcacttccgtgtattctacgggttgaaaagtcacaaaaaccaaccagtttcaagg
agaaggaacagagatcacatttctcaattggagaagggtcaaagtcacattgtaatcaga
gcctatgggatacgaagtattgcggtcagccagtttctgagggtgacaatagaggaaagg
gtggagatggagttcaggtccagaagccatagaagcgagtgtgacattgtgctcaaggtc
agcacatgtcagtgtggggtgtcacatgctgttgtgaaccatcatttatcaccaattatg
gaagacctcctatgggcatcttgccatatgcattataaagatgtagtgatgactgccttc
cctgaagcaaagcttctggttcaaggaaaggccaaaggaaacaagcaaagaaatctccaa
aggaccacaaaaacccctgggctatcggttatgtccccttcaagctgtagcgggggaggg
gaatttggcccaacccaggtacatgtccccttctccctctctgatttaaagcagatcaag
gcagaccaggggaagctttcagatgatcctgataggtatacagatgtcctacagggtcta
gggcaaaccttcaatctcacttggagagatgtcatgctattgttagatcaaaccctggcc
tttaatttaaagaatgtggctttagccacagcccgagagtttggagatacctggtatctt
agtcaagtaaatgatagaatgacagctggggaaagggacaaagtctctcccggtcagcaa
gccatccctagtgtggatccccactgggacctagactcagatcattgggactggagtcgc
aaacatctgttgacctgtgttctagaaagactaaggagaattaggaaagagcctatgaat
tattcaatgatgtccaccataactcaggaaaaggaagaaagtcttgccttccttgagtgg
ctacaggaggccttaagaaaatatactcccctgtcacccaactcactcaagggttaa

>gi568815588f:114838254_115075376|GENSCAN_predicted_peptide_6|158_aa
MHLHTTTTATTTTNNNNNNNNNSIEWQLADKSRFLSLGQNLDCGKLTKAAMETSMTGVTL
KATDQKYRFPTVSGICSFRWVLGLADFKNEATDPCGVKLQSFAVSVTALKGSTSGVLCSF
QWVRGLLTSGMKPQTLAVSVTAHKGSVDTKNEQQQDLL

>gi568815588f:114838254_115075376|GENSCAN_predicted_CDS_6|477_bp
atgcatcttcatacaacaactactgctactactactaccaataataataacaacaacaac
aataatagcattgagtggcagcttgctgacaaatccaggtttctaagtctaggtcagaac
ctggactgtggtaaattaacaaaggctgcaatggagacttcaatgactggagtaaccctg
aaagccacagatcaaaaatacagatttcctactgtgtctggaatttgttccttccggtgg
gttcttggtcttgctgacttcaagaatgaagccacagacccttgcggagtgaagctgcag
agcttcgcagtgagtgttacagctcttaaaggcagcacatcgggagttctttgttccttc
cagtgggttcgtggtctgttgacttcaggaatgaagccacagaccctcgcagtgagtgtt
acagctcataaaggtagtgtggacacaaagaatgagcagcagcaagatttattgtga