GENSCAN 1.0	Date run:  5-Nov-116	Time: 07:39:24

Sequence gi568815580f:58571644_58847839 : 276196 bp : 43.21% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 Intr -   8905   7171 1735  0  1   77  110   580 0.158  46.42
 1.02 Intr -  35796  35679  118  1  1   76  111    72 0.429   7.82
 1.01 Init -  42527  42488   40  2  1   91  103    -6 0.310   1.55
 1.00 Prom -  44010  43971   40                              -7.16

 2.07 PlyA -  44584  44579    6                               1.05
 2.06 Term -  47226  47176   51  0  0  117   55    72 0.168   4.23
 2.05 Intr -  59956  59733  224  2  2   43   95    78 0.011   1.85
 2.04 Intr -  70886  70752  135  0  0   69  105    39 0.200   4.24
 2.03 Intr -  74620  74552   69  2  0   68  102    30 0.026   1.55
 2.02 Intr -  88471  88417   55  1  1   58  115    39 0.029   2.15
 2.01 Init -  90852  90772   81  0  0   81   94    11 0.048   1.07
 2.00 Prom -  91089  91050   40                              -4.26

 3.00 Prom +  93997  94036   40                              -4.96
 3.01 Init + 100001 100209  209  1  2   78   99   351 0.998  31.49
 3.02 Intr + 109527 109693  167  0  2  103   96    83 0.993  10.20
 3.03 Intr + 118693 118889  197  2  2   22   28   117 0.226  -1.77
 3.04 Intr + 119554 119803  250  0  1   82   -6   258 0.012  12.81
 3.05 Intr + 124723 124844  122  2  2  134   76   -27 0.975   0.91
 3.06 Intr + 128262 128345   84  2  0   91   62    33 0.506   1.02
 3.07 Intr + 128798 128948  151  1  1   91   89   109 0.862  11.04
 3.08 Intr + 142440 142466   27  1  0   96  105     4 0.094   0.99
 3.09 Intr + 151405 151608  204  2  0   85   95   160 0.200  15.57
 3.10 Intr + 161754 161931  178  1  1  124  115    25 0.980   7.78
 3.11 Intr + 162664 162738   75  1  0   69   76   116 0.993   7.13
 3.12 Intr + 163559 163686  128  2  2  111   93   101 0.999  13.22
 3.13 Intr + 170222 170371  150  0  0   90   64    62 0.849   4.13
 3.14 Intr + 172695 172852  158  1  2   94   70    48 0.904   3.33
 3.15 Intr + 174023 174085   63  1  0  116   -3    76 0.252   0.21
 3.16 Intr + 175762 175882  121  0  1  125   20    55 0.355   2.47
 3.17 Term + 189487 189584   98  2  2   72   36    88 0.040   0.13
 3.18 PlyA + 190241 190246    6                               1.05

 4.04 PlyA - 192702 192697    6                               1.05
 4.03 Term - 197359 197144  216  1  0   56   55    95 0.070   0.14
 4.02 Intr - 217307 217164  144  2  0   81   61    67 0.131   3.78
 4.01 Init - 236050 235862  189  1  0   48   49   123 0.238   3.41
 4.00 Prom - 238351 238312   40                              -6.66

 5.00 Prom + 240129 240168   40                              -5.06
 5.01 Sngl + 255574 256062  489  0  0   60   49   228 0.475  10.63
 5.02 PlyA + 257119 257124    6                               1.05

 6.02 PlyA - 257894 257889    6                               1.05
 6.01 Term - 271932 271739  194  1  2   32   42   146 0.390   1.98

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  66886  67069  184  1  1   94   49    93 0.803   3.02
S.002 Term + 119554 119832  279  0  0   82   42   230 0.926  13.25
S.003 Init + 124487 124520   34  1  1   91  108    29 0.951   5.23


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580f:58571644_58847839|GENSCAN_predicted_peptide_1|631_aa
MSLLQHYGSFHPSCQPKPEVTWYKNGQAIDGSGIISNYEFFENQYIHVLHLSCCTKNDAA
VYQISAKNSFGMICCSASVEVECSSENPQLSPNLEDDRDRGWKHETGTHEEERANQIDEK
EHPYKEEESISPGTPRSADSSPSKSNHSLSLQSLGNLDISVSSSENPLGVKGTRHTGEAY
DPSNTEEIANGLLFLNSSHIYEKQDRCCHKTVHSMASKFTDGDLNNDGPHDEGLRSSQQN
PKVQKYISFSLPLSEATAHIYPGDSAVANKQPSPQLSSEDSDSDYELCPEITLTYTEEFS
DDDLEYLECSDVMTDYSNAVWQRNLLGTEHVFLLESDDEEMEFGEHCLGGCEHFLSGMGC
GSRVSGDAGPMVATAGFCGHHSQPQEVGVRSSRVSKHGPSSPQTGMTLILGPHQDGTSSV
TEQGRYKLPTAPEAAENDYPGIQGETRDSHQAREEFASDNLLNMDESVRETEMKLLSGES
ENSGMSQCWETAADKRVGGKDLWSKRGSRKSARVRQPGMKGNPKKPNANLRESTTEGTLH
LCSAKESAEPPLTQSDKRETSHTTAAATGRSSHADARECAISTQAEQEAKTLQTSTDSVS
KEGNTNCKGEGMQVNTLFETSQVPDWSDPPQ

>gi568815580f:58571644_58847839|GENSCAN_predicted_CDS_1|1893_bp
atgtcacttcttcaacattacggctctttccacccatcatgtcagcccaagccagaggta
acttggtataagaatggtcaggccatcgatgggagtggcattatttccaactatgaattc
tttgagaatcagtatattcatgtgttacatctctcttgctgtaccaaaaatgatgctgct
gtctatcaaatctcggctaaaaactcttttggaatgatctgttgttctgcttccgttgag
gttgagtgctcatcagagaacccacaattgtctcctaacctggaagatgacagggacagg
ggttggaaacatgaaacagggacacatgaagaagaaagggcaaatcagattgatgagaag
gaacatccttataaggaagaagaaagcatctccccgggcactcccaggtcagctgactcc
tccccctccaaatccaaccattcactctccctccagtcattgggcaatcttgacattagt
gtgtccagttctgaaaatcctttgggtgttaaaggaacaaggcacactggagaggcttat
gatccaagtaacacagaagaaattgcaaatgggttgctttttcttaattcaagtcatatt
tatgaaaaacaagacagatgttgccacaagacagtgcattccatggcatcaaagttcacg
gatggtgacctgaacaatgatggtcctcatgatgaaggcttacgctctagtcagcaaaat
cccaaagtacagaaatacattagcttcagcctcccgctatctgaggcaactgcacacatt
tacccaggtgacagtgccgtggccaacaaacaacccagcccacagctttccagtgaagac
tctgacagtgactatgaactttgcccagagataaccctaacctacaccgaggagttttca
gatgatgacctggagtatctggaatgttctgatgttatgacggattactctaatgcagtt
tggcaaaggaacctgctggggactgagcatgtttttttattagaaagcgatgacgaagag
atggaattcggtgagcattgcctgggtgggtgtgagcatttcctcagtggaatgggttgt
gggtctcgggtgtcgggtgacgctgggcctatggttgccactgctggcttctgtggtcat
cactcacaaccccaagaagttggggtgaggagcagcagagtctccaagcacggtccctca
tccccacaaacagggatgactctcattttgggacctcaccaggatggaacgtcttcagtg
acagaacaggggagatataaactccccactgctcccgaggctgctgaaaatgattatcca
ggaattcaaggagaaaccagagacagccaccaagcaagagaggaatttgccagtgacaat
ctgctcaacatggatgaatcagtaagagagacagagatgaagctcttgtctggtgagtca
gaaaactcagggatgagccagtgttgggagacggcagctgacaagagagtggggggaaag
gacttatggagcaagaggggttcaaggaaatctgccagggtgaggcagccgggaatgaag
ggaaatcccaagaagccgaatgccaacctgagagaaagtacaacagaaggtacccttcat
ctctgctctgccaaagaatctgctgagcccccactaacccagagtgataaaagagagact
tctcacaccacagcagcagcgactggtcggagttcccatgctgatgcaagagaatgtgct
atttcaacccaggcagagcaagaagcaaaaacccttcaaacttcaacagactcagtctcc
aaagaaggcaacacaaattgcaagggagaaggcatgcaagttaatactctatttgaaaca
agccaggttccagactggagtgatcctcctcag

>gi568815580f:58571644_58847839|GENSCAN_predicted_peptide_2|204_aa
MKKFWGWLYTLQTDLRPLICTLKNSSKFKCDNHDHSRLISTLPFAGDPPMTSGPQTKQPK
EHLTNFKSDIIPQFGLPTSIQSDNGLAFISQITQAVSQALGIQWLLVLPQTATQISDFNK
RLLANNVDGEVRMHSSRLTTEAPCSTLDHVLFVTTNSANGIQVLSISPHFVNLEPLLFLS
KETEFSTDLTASFLVTAAMRLADY

>gi568815580f:58571644_58847839|GENSCAN_predicted_CDS_2|615_bp
atgaagaagttctggggatggctgtacacactgcaaacggacttaaggccactgatttgc
acactcaaaaatagttcaaagtttaaatgtgacaaccatgatcattctcggttaatatcg
acattaccctttgcaggagatccacctatgacctcaggtcctcagaccaaacagcccaaa
gaacatctcaccaatttcaaatcggacataattcctcagtttggccttcctacctctata
cagtctgataacggactggcctttattagtcaaatcacccaagcagtttctcaggctctt
ggtattcagtggctcctggttttacctcaaaccgccacccaaatttcagatttcaacaaa
agactcctggctaacaatgttgatggggaagtgcgcatgcacagctctcgtcttacaaca
gaagccccgtgcagcaccctggatcatgttctgtttgtgactacaaatagtgccaatggt
atccaggtcctttctatttccccacactttgtcaacctggagcctcttcttttcctttct
aaggagactgaattctccactgatctgacagcaagctttttggtgacagcagccatgcga
cttgctgactattga

>gi568815580f:58571644_58847839|GENSCAN_predicted_peptide_3|793_aa
MSLLGDPLQALPPSAAPTGPLLAPPAGATLNRLREPLLRRLSELLDQAPEGRGWRRLAEL
AGSRGRLRLSCLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQ
LLSPPDQISMVLADQYGAARQALTSSRQLNLGSFGAPRGGACEWGMHSMWKPEPPPLDGV
YEIPGPEPIPSECNVSDVKDDTGFWEGYPYPYLHILHFLEKADLQPHSLQPDQLWAKMIL
FAFGIALAQAQLLCGNDTKISEQPVVVQSTCTDGRIKITVNPESKAVLAGQFVKLCCRAT
GHPFVQYQWFKMNKETLKEIGYCLVKEFILLQNFADQKVRGLKIPNGNTSELIFNAVHVK
DAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQNELNNLGHPAKDKVALLIGNMNYREHP
KLKAPLVDVYELTNLLRQLDFKVVSLLDLTEYEMRNAVDEFLLLLDKGVYGLLYYAGHGY
ENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQEKETGLNVFLLDMCRKRNDYDDTIPIL
DALKVTANIVFGYATCQGAEAFEIQHSGLANGIFMKFLKDRLLEDKKITVLLDEVAEDMG
KCHLTKGKQALEIRSSLSEKRALTDPIQGTEYSAESLVRNLQWAKAHELPESMCLKFDCG
VQIQLGFAAEFSNVMIIYTSIVYKPPEIIMCDAYVTDFPLDLDIDPKDANKGTPEETGSY
LEHLVFTVCLSYQYSGLEDTVEDKQEVNVGKPLIAKLDMHREFKLAPLMILLPAAIAYSD
VRAAIPMENGMES

>gi568815580f:58571644_58847839|GENSCAN_predicted_CDS_3|2382_bp
atgtcgctgttgggggacccgctacaggccctgccgccctcggccgcccccacggggccg
ctgctcgcccctccggccggcgcgaccctcaaccgcctgcgggagccgctgctgcggagg
ctcagcgagctcctggatcaggcgcccgagggccggggctggaggagactggcggagctg
gcggggagtcgcgggcgcctccgcctcagttgcctagacctggagcagtgttctcttaag
gtactggagcctgaaggaagccccagcctgtgtctgctgaagttaatgggtgaaaaaggt
tgcacagtcacagaattgagtgatttcctgcaggctatggaacacactgaagttcttcag
cttctcagccccccagaccagatcagtatggtgttggcagatcagtatggtgccgctagg
caggcactgactagctccaggcagctcaaccttgggagcttcggggccccgagaggtgga
gcctgtgagtggggcatgcactccatgtggaagccagagcctcctcccctggatggagtg
tacgagatccctggaccggagcccatcccctctgaatgcaatgtttctgatgtgaaagat
gacacaggattctgggagggctatccttacccctatctccatatcctgcacttcctggag
aaagccgatttgcaaccacatagccttcaaccagatcagctgtgggccaagatgatcctg
tttgcttttggcattgccctggctcaggcccagctcctctgtggcaatgacaccaagatc
tcggagcagcccgtggttgtgcagagtacatgcacagacggacgaataaagattactgta
aacccagagtcaaaggcagtcttggctggacagtttgtgaaactgtgttgccgggcaact
ggacatccttttgttcaatatcagtggttcaaaatgaataaagagaccttgaaggagatt
ggatattgtttggttaaggagtttatcctcttacagaattttgcagatcagaaggtccgg
ggtctcaagattccaaatggaaatacatcagagcttatttttaatgcagtgcatgtaaaa
gatgcaggcttttatgtctgtcgagttaataacaatttcacctttgaattcagccagtgg
tcacagctggatgtttgcgacatcccagagagcttccagaatgaattaaataatcttggt
catcctgcgaaggacaaggttgcccttttgataggaaatatgaattaccgggagcacccc
aagctcaaagctcctttggtggatgtgtacgaattgactaacttactgagacagctggac
ttcaaagtggtttcactgttggatcttactgaatatgagatgcgtaatgctgtggatgag
tttttactccttttagacaagggagtatatgggttattatattatgcaggacatggttat
gaaaattttgggaacagcttcatggtccccgttgatgctccaaatccatataggtctgaa
aattgtctgtgtgtacaaaatatactgaaattgatgcaagaaaaagaaactggacttaat
gtgttcttattggatatgtgtaggaaaagaaatgactacgatgataccattccaatcttg
gatgcactaaaagtcaccgccaatattgtgtttggatatgccacgtgtcaaggagcagaa
gcttttgaaatccagcattctggattggcaaatggaatctttatgaaatttttaaaagac
agattattagaagataagaaaatcactgtgttactggatgaagttgcagaagatatgggt
aagtgtcaccttaccaaaggcaaacaggctctagagattcgaagtagtttatctgagaag
agagcacttactgatccaatacagggaacagaatattctgctgaatctcttgtgcggaat
ctacagtgggccaaggctcatgaacttccagaaagtatgtgtcttaagtttgactgtggt
gttcagattcaattaggatttgcagctgagttttccaatgtcatgatcatctatacaagt
atagtttacaaaccaccggagataataatgtgtgatgcctacgttactgattttccactt
gatctagatattgatccaaaagatgcaaataaaggcacacctgaagaaactggcagctac
ttggaacatctagtcttcacagtatgtttatcatatcagtactcaggattggaagatact
gtagaggacaagcaggaagtgaatgttgggaaacctctcattgctaaattagacatgcat
cgagagttcaaactcgcacctttgatgatactgcttcctgctgccattgcctattctgat
gtcagagcagccattcccatggaaaatggaatggaaagctaa

>gi568815580f:58571644_58847839|GENSCAN_predicted_peptide_4|182_aa
MLQTRRDSPPITVVAHRQNEPDKTSTFQALDEADLDSVHSQKMLVAALLRQSLLCLSVFW
IELKDPADMLWEVPKPPGKSKWSTIEAPGPWYQLNSQPIAPSHQLRVIHMEGPQMGIWLT
VLKAGASLPGDSVELFDISLPFGSITGMGMGEEGAGHLSWPVDACPSLAVIPAALAAVPR
SS

>gi568815580f:58571644_58847839|GENSCAN_predicted_CDS_4|549_bp
atgctacagacccgtagggactcaccacccataacagtagttgcccatcggcaaaatgag
cctgacaaaacgtccactttccaagctcttgatgaagctgacttggacagtgttcacagt
cagaagatgttggtcgcagcccttctccgtcagagcctcctctgtctctcagtgttctgg
attgaactgaaagacccagctgacatgctatgggaagtccctaagccacctggaaagtcc
aagtggagtacaattgaggctccaggaccatggtaccagctgaactcccagccaatagca
ccaagtcaccaactccgagtgatccacatggaggggccccagatgggtatctggttgact
gttctcaaggcaggggcctccctcccaggagattcggtggagctttttgatatttctctg
ccctttggcagcatcacaggcatgggcatgggagaggagggagccggccacttgtcctgg
cctgttgatgcatgcccgagtctggctgtcatcccagccgcgctggctgctgtccctcgg
tcttcctga

>gi568815580f:58571644_58847839|GENSCAN_predicted_peptide_5|162_aa
MKPWTLAVSVQFLKMVCPEFVPSDVQMCPEFPPSGGFVVSLTSGMKLQTFTVGLTALKSS
TSGVVHSFQWVVLLASGVKLQTFTVLQFTKAARTQRVSSGKIYHKEQKNKTHTLQKRTQA
SCHRWFRQLAFIPSSGPTHILLIGPLYRELIGPFYRELIGLF

>gi568815580f:58571644_58847839|GENSCAN_predicted_CDS_5|489_bp
atgaagccgtggaccctcgcggtgagtgtacagttcttaaagatggtgtgtccggagttt
gttccttcagatgttcagatgtgtccagagtttcctccttctggtgggttcgtggtctca
ctgacttcaggaatgaagctgcaaaccttcacagtgggccttacagctcttaaaagcagt
acatctggagttgttcattccttccagtgggtggtcttgctggcttcaggagtgaagctg
cagaccttcacagtgttacagttcacaaaggcagcaaggactcaaagagtgagcagcggc
aagatttatcacaaagagcaaaagaacaaaactcacacactgcagaagcggacccaagcc
agttgccaccgctggttccggcagcttgcttttattccctcatctggccccacccacata
ctgctgattggtccactttacagagagctgattggtccattttacagagagctgattggc
ctgttttga

>gi568815580f:58571644_58847839|GENSCAN_predicted_peptide_6|64_aa
XLRRPGGVGSSAKDSSEGLEYLCTTELLETSTVAQAALNQQLPGNADPSYFEAGDTKAYD
CHPD

>gi568815580f:58571644_58847839|GENSCAN_predicted_CDS_6|195_bp
nagctcagaaggcctgggggagtaggcagttcagccaaggacagttccgagggtttggaa
tacctctgcacaacagagctcctggagacctcgacagttgcgcaggcagccctgaatcag
cagctcccaggcaacgctgacccgagctattttgaagctggtgacactaaagcctatgac
tgtcacccggattaa