Result of FASTA (ccds) for pF1KB5673
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5673, 550 aa
  1>>>pF1KB5673 550 - 550 aa - 550 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4459+/- 0.001; mu= 17.8842+/- 0.060
 mean_var=66.7565+/-13.945, 0's: 0 Z-trim(103.7): 35  B-trim: 0 in 0/49
 Lambda= 0.156974
 statistics sampled from 7520 (7537) to 7520 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.589), E-opt: 0.2 (0.232), width:  16
 Scan time:  3.170

The best scores are:                                      opt bits E(32554)
CCDS1330.1 SOAT1 gene_id:6646|Hs108|chr1           ( 550) 3753 859.2       0
CCDS58047.1 SOAT1 gene_id:6646|Hs108|chr1          ( 492) 3385 775.9       0
CCDS58048.1 SOAT1 gene_id:6646|Hs108|chr1          ( 485) 3342 766.1       0
CCDS8847.1 SOAT2 gene_id:8435|Hs108|chr12          ( 522) 1711 396.8 3.4e-110
CCDS6420.1 DGAT1 gene_id:8694|Hs108|chr8           ( 488)  405 101.0 3.4e-21


>>CCDS1330.1 SOAT1 gene_id:6646|Hs108|chr1                (550 aa)
 initn: 3753 init1: 3753 opt: 3753  Z-score: 4590.8  bits: 859.2 E(32554):    0
Smith-Waterman score: 3753; 100.0% identity (100.0% similar) in 550 aa overlap (1-550:1-550)

               10        20        30        40        50        60
pF1KB5 MVGEEKMSLRNRLSKSRENPEEDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAEAEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MVGEEKMSLRNRLSKSRENPEEDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAEAEE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 LKPFFMKEVGSHFDDFVTNLIEKSASLDNGGCALTTFSVLEGEKNNHRAKDLRAPPEQGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LKPFFMKEVGSHFDDFVTNLIEKSASLDNGGCALTTFSVLEGEKNNHRAKDLRAPPEQGK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 IFIARRSLLDELLEVDHIRTIYHMFIALLILFILSTLVVDYIDEGRLVLEFSLLSYAFGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 IFIARRSLLDELLEVDHIRTIYHMFIALLILFILSTLVVDYIDEGRLVLEFSLLSYAFGK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 FPTVVWTWWIMFLSTFSVPYFLFQHWATGYSKSSHPLIRSLFHGFLFMIFQIGVLGFGPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 FPTVVWTWWIMFLSTFSVPYFLFQHWATGYSKSSHPLIRSLFHGFLFMIFQIGVLGFGPT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 YVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVPRVLNSAKEKSSTVPIPTVNQYLYF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVPRVLNSAKEKSSTVPIPTVNQYLYF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 LFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFFYVYYIFERLCAPLFRNIKQEPFSAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFFYVYYIFERLCAPLFRNIKQEPFSAR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 VLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEMLRFGDRMFYKDWWNSTSYSNYYRTW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEMLRFGDRMFYKDWWNSTSYSNYYRTW
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 NVVVHDWLYYYAYKDFLWFFSKRFKSAAMLAVFAVSAVVHEYALAVCLSFFYPVLFVLFM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NVVVHDWLYYYAYKDFLWFFSKRFKSAAMLAVFAVSAVVHEYALAVCLSFFYPVLFVLFM
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB5 FFGMAFNFIVNDSRKKPIWNVLMWTSLFLGNGVLLCFYSQEWYARQHCPLKNPTFLDYVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 FFGMAFNFIVNDSRKKPIWNVLMWTSLFLGNGVLLCFYSQEWYARQHCPLKNPTFLDYVR
              490       500       510       520       530       540

              550
pF1KB5 PRSWTCRYVF
       ::::::::::
CCDS13 PRSWTCRYVF
              550

>>CCDS58047.1 SOAT1 gene_id:6646|Hs108|chr1               (492 aa)
 initn: 3385 init1: 3385 opt: 3385  Z-score: 4141.2  bits: 775.9 E(32554):    0
Smith-Waterman score: 3385; 100.0% identity (100.0% similar) in 491 aa overlap (60-550:2-492)

      30        40        50        60        70        80         
pF1KB5 AKESLETPSNGRIDIKQLIAKKIKLTAEAEELKPFFMKEVGSHFDDFVTNLIEKSASLDN
                                     ::::::::::::::::::::::::::::::
CCDS58                              MELKPFFMKEVGSHFDDFVTNLIEKSASLDN
                                            10        20        30 

      90       100       110       120       130       140         
pF1KB5 GGCALTTFSVLEGEKNNHRAKDLRAPPEQGKIFIARRSLLDELLEVDHIRTIYHMFIALL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GGCALTTFSVLEGEKNNHRAKDLRAPPEQGKIFIARRSLLDELLEVDHIRTIYHMFIALL
              40        50        60        70        80        90 

     150       160       170       180       190       200         
pF1KB5 ILFILSTLVVDYIDEGRLVLEFSLLSYAFGKFPTVVWTWWIMFLSTFSVPYFLFQHWATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ILFILSTLVVDYIDEGRLVLEFSLLSYAFGKFPTVVWTWWIMFLSTFSVPYFLFQHWATG
             100       110       120       130       140       150 

     210       220       230       240       250       260         
pF1KB5 YSKSSHPLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRFIIIFEQIRFVMKAHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 YSKSSHPLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRFIIIFEQIRFVMKAHS
             160       170       180       190       200       210 

     270       280       290       300       310       320         
pF1KB5 FVRENVPRVLNSAKEKSSTVPIPTVNQYLYFLFAPTLIYRDSYPRNPTVRWGYVAMKFAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FVRENVPRVLNSAKEKSSTVPIPTVNQYLYFLFAPTLIYRDSYPRNPTVRWGYVAMKFAQ
             220       230       240       250       260       270 

     330       340       350       360       370       380         
pF1KB5 VFGCFFYVYYIFERLCAPLFRNIKQEPFSARVLVLCVFNSILPGVLILFLTFFAFLHCWL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VFGCFFYVYYIFERLCAPLFRNIKQEPFSARVLVLCVFNSILPGVLILFLTFFAFLHCWL
             280       290       300       310       320       330 

     390       400       410       420       430       440         
pF1KB5 NAFAEMLRFGDRMFYKDWWNSTSYSNYYRTWNVVVHDWLYYYAYKDFLWFFSKRFKSAAM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NAFAEMLRFGDRMFYKDWWNSTSYSNYYRTWNVVVHDWLYYYAYKDFLWFFSKRFKSAAM
             340       350       360       370       380       390 

     450       460       470       480       490       500         
pF1KB5 LAVFAVSAVVHEYALAVCLSFFYPVLFVLFMFFGMAFNFIVNDSRKKPIWNVLMWTSLFL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LAVFAVSAVVHEYALAVCLSFFYPVLFVLFMFFGMAFNFIVNDSRKKPIWNVLMWTSLFL
             400       410       420       430       440       450 

     510       520       530       540       550
pF1KB5 GNGVLLCFYSQEWYARQHCPLKNPTFLDYVRPRSWTCRYVF
       :::::::::::::::::::::::::::::::::::::::::
CCDS58 GNGVLLCFYSQEWYARQHCPLKNPTFLDYVRPRSWTCRYVF
             460       470       480       490  

>>CCDS58048.1 SOAT1 gene_id:6646|Hs108|chr1               (485 aa)
 initn: 3342 init1: 3342 opt: 3342  Z-score: 4088.6  bits: 766.1 E(32554):    0
Smith-Waterman score: 3342; 100.0% identity (100.0% similar) in 485 aa overlap (66-550:1-485)

          40        50        60        70        80        90     
pF1KB5 TPSNGRIDIKQLIAKKIKLTAEAEELKPFFMKEVGSHFDDFVTNLIEKSASLDNGGCALT
                                     ::::::::::::::::::::::::::::::
CCDS58                               MKEVGSHFDDFVTNLIEKSASLDNGGCALT
                                             10        20        30

         100       110       120       130       140       150     
pF1KB5 TFSVLEGEKNNHRAKDLRAPPEQGKIFIARRSLLDELLEVDHIRTIYHMFIALLILFILS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TFSVLEGEKNNHRAKDLRAPPEQGKIFIARRSLLDELLEVDHIRTIYHMFIALLILFILS
               40        50        60        70        80        90

         160       170       180       190       200       210     
pF1KB5 TLVVDYIDEGRLVLEFSLLSYAFGKFPTVVWTWWIMFLSTFSVPYFLFQHWATGYSKSSH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TLVVDYIDEGRLVLEFSLLSYAFGKFPTVVWTWWIMFLSTFSVPYFLFQHWATGYSKSSH
              100       110       120       130       140       150

         220       230       240       250       260       270     
pF1KB5 PLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENV
              160       170       180       190       200       210

         280       290       300       310       320       330     
pF1KB5 PRVLNSAKEKSSTVPIPTVNQYLYFLFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PRVLNSAKEKSSTVPIPTVNQYLYFLFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFF
              220       230       240       250       260       270

         340       350       360       370       380       390     
pF1KB5 YVYYIFERLCAPLFRNIKQEPFSARVLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 YVYYIFERLCAPLFRNIKQEPFSARVLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEM
              280       290       300       310       320       330

         400       410       420       430       440       450     
pF1KB5 LRFGDRMFYKDWWNSTSYSNYYRTWNVVVHDWLYYYAYKDFLWFFSKRFKSAAMLAVFAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LRFGDRMFYKDWWNSTSYSNYYRTWNVVVHDWLYYYAYKDFLWFFSKRFKSAAMLAVFAV
              340       350       360       370       380       390

         460       470       480       490       500       510     
pF1KB5 SAVVHEYALAVCLSFFYPVLFVLFMFFGMAFNFIVNDSRKKPIWNVLMWTSLFLGNGVLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SAVVHEYALAVCLSFFYPVLFVLFMFFGMAFNFIVNDSRKKPIWNVLMWTSLFLGNGVLL
              400       410       420       430       440       450

         520       530       540       550
pF1KB5 CFYSQEWYARQHCPLKNPTFLDYVRPRSWTCRYVF
       :::::::::::::::::::::::::::::::::::
CCDS58 CFYSQEWYARQHCPLKNPTFLDYVRPRSWTCRYVF
              460       470       480     

>>CCDS8847.1 SOAT2 gene_id:8435|Hs108|chr12               (522 aa)
 initn: 1748 init1: 1196 opt: 1711  Z-score: 2091.9  bits: 396.8 E(32554): 3.4e-110
Smith-Waterman score: 1711; 55.7% identity (80.1% similar) in 433 aa overlap (116-546:96-520)

          90       100       110       120         130       140   
pF1KB5 SLDNGGCALTTFSVLEGEKNNHRAKDLRAPPEQGK--IFIARRSLLDELLEVDHIRTIYH
                                     :  ::  .:: :.::::::.::.:.:::::
CCDS88 RAMREAIQSYPSQDKPLPPPPPGSLSRTQEPSLGKQKVFIIRKSLLDELMEVQHFRTIYH
          70        80        90       100       110       120     

           150       160       170       180       190       200   
pF1KB5 MFIALLILFILSTLVVDYIDEGRLVLEFSLLSYAFGKFPTVVWTWWIMFLSTFSVPYFLF
       :::: : .::.:::..:.::::::.:::.:: ..::..: .. ::  :::::. .::  .
CCDS88 MFIAGLCVFIISTLAIDFIDEGRLLLEFDLLIFSFGQLPLALVTWVPMFLSTLLAPYQAL
         130       140       150       160       170       180     

           210       220       230       240       250       260   
pF1KB5 QHWATGYSKSSHPLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRFIIIFEQIRF
       . :: :   ..  :      :  ..  .  ::   :..:.. . :::::: ...:::.::
CCDS88 RLWARGTWTQATGL------GCALLAAHAVVLCALPVHVAVEHQLPPASRCVLVFEQVRF
         190             200       210       220       230         

           270       280       290       300       310       320   
pF1KB5 VMKAHSFVRENVPRVLNSAKEKSSTVPIPTVNQYLYFLFAPTLIYRDSYPRNPTVRWGYV
       .::..::.:: :: .: .  ...  .  :. ..:::::: ::::::..:::.: :::.::
CCDS88 LMKSYSFLREAVPGTLRA--RRGEGIQAPSFSSYLYFLFCPTLIYRETYPRTPYVRWNYV
     240       250         260       270       280       290       

           330       340       350       360       370       380   
pF1KB5 AMKFAQVFGCFFYVYYIFERLCAPLFRNIKQEPFSARVLVLCVFNSILPGVLILFLTFFA
       : .:::..:: .:. .:. :::.:.: :...::::.:.::: .... :::...:.: :::
CCDS88 AKNFAQALGCVLYACFILGRLCVPVFANMSREPFSTRALVLSILHATLPGIFMLLLIFFA
       300       310       320       330       340       350       

           390       400       410       420       430       440   
pF1KB5 FLHCWLNAFAEMLRFGDRMFYKDWWNSTSYSNYYRTWNVVVHDWLYYYAYKDFLWFFSKR
       :::::::::::::::::::::.:::::::.:::::::::::::::: :.:.: : ... :
CCDS88 FLHCWLNAFAEMLRFGDRMFYRDWWNSTSFSNYYRTWNVVVHDWLYSYVYQDGLRLLGAR
       360       370       380       390       400       410       

           450       460       470       480       490       500   
pF1KB5 FKSAAMLAVFAVSAVVHEYALAVCLSFFYPVLFVLFMFFGMAFNFIVNDSRKKPIWNVLM
        ...:::.:: ::::.::: .   :.:::::...::. .:  .::...:.:  : :::::
CCDS88 ARGVAMLGVFLVSAVAHEYIFCFVLGFFYPVMLILFLVIGGMLNFMMHDQRTGPAWNVLM
       420       430       440       450       460       470       

           510       520       530       540       550
pF1KB5 WTSLFLGNGVLLCFYSQEWYARQHCPLKNPTFLDYVRPRSWTCRYVF
       :: ::::.:. . .: ::::::.:::: . ::   : ::::.:    
CCDS88 WTMLFLGQGIQVSLYCQEWYARRHCPLPQATFWGLVTPRSWSCHT  
       480       490       500       510       520    

>>CCDS6420.1 DGAT1 gene_id:8694|Hs108|chr8                (488 aa)
 initn: 358 init1: 231 opt: 405  Z-score: 493.9  bits: 101.0 E(32554): 3.4e-21
Smith-Waterman score: 446; 26.6% identity (56.0% similar) in 448 aa overlap (110-523:53-477)

      80        90       100       110       120       130         
pF1KB5 LIEKSASLDNGGCALTTFSVLEGEKNNHRAKDLRAPPEQGKIFIARRSLLDELLEVD---
                                     ::  :   .:.  .  . : : :.  :   
CCDS64 GPAAAEEEVRDAAAGPDVGAAGDAPAPAPNKDGDAGVGSGHWELRCHRLQDSLFSSDSGF
             30        40        50        60        70        80  

         140       150       160       170       180           190 
pF1KB5 -HIRTIYHMFIALLILFILSTLVVDYIDEGRLVLEFSLLSYAFGKFPTVVWTW----WIM
        . : : .  ...:::     .. . :  : ::  ....:  : : :   ..:     ..
CCDS64 SNYRGILNWCVVMLILSNARLFLENLIKYGILVDPIQVVSL-FLKDP---YSWPAPCLVI
             90       100       110       120           130        

             200        210       220       230        240         
pF1KB5 FLSTFSVPYF-LFQHWATGYSKSSHPLIRSLFHGFLFMIFQIG-VLGFGPTYVVLAYTLP
         ..:.:  : . .. :.:    .         :.:. . ... .: :  . :.:. .. 
CCDS64 AANVFAVAAFQVEKRLAVGALTEQA--------GLLLHVANLATILCFPAAVVLLVESIT
      140       150       160               170       180       190

     250             260       270       280            290        
pF1KB5 PASRFI------IIFEQIRFVMKAHSFVRENVPRVLNSAKEKSS-----TVPIP---TVN
       :.. ..      :.: ..     ..:. :.   .. ...:. ::     ::  :   :  
CCDS64 PVGSLLALMAHTILFLKLFSYRDVNSWCRRARAKAASAGKKASSAAAPHTVSYPDNLTYR
              200       210       220       230       240       250

         300       310       320       330       340         350   
pF1KB5 QYLYFLFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFFYVYYI--FERLCAPLFRNIK
       .  :::::::: :. ..::.: .:  ..  .. ...  ::    .  ...  .: ..: .
CCDS64 DLYYFLFAPTLCYELNFPRSPRIRKRFLLRRILEML--FFTQLQVGLIQQWMVPTIQN-S
              260       270       280         290       300        

               360       370       380       390       400         
pF1KB5 QEPFS----ARVLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEMLRFGDRMFYKDWWN
       ..::.    .:. .  ...  .:. :: .. :. ..:  ::: ::...:::: ::.::::
CCDS64 MKPFKDMDYSRI-IERLLKLAVPNHLIWLIFFYWLFHSCLNAVAELMQFGDREFYRDWWN
       310        320       330       340       350       360      

     410       420       430       440       450       460         
pF1KB5 STSYSNYYRTWNVVVHDWLYYYAYKDFLWFFSKRFKSAAMLAVFAVSAVVHEYALAVCLS
       : : . ....::. :: :   . :: .:   :...   :  .:: .::  ::: ..: : 
CCDS64 SESVTYFWQNWNIPVHKWCIRHFYKPMLRRGSSKW--MARTGVFLASAFFHEYLVSVPLR
        370       380       390       400         410       420    

     470       480           490       500       510       520     
pF1KB5 FFYPVLFVLFMFFGMA----FNFIVNDSRKKPIWNVLMWTSLFLGNGVLLCFYSQEWYAR
            .: :. : ::     . ..:.   .    :. .: ::..:. . . .: ...:  
CCDS64 -----MFRLWAFTGMMAQIPLAWFVGRFFQGNYGNAAVWLSLIIGQPIAVLMYVHDYYVL
               430       440       450       460       470         

         530       540       550
pF1KB5 QHCPLKNPTFLDYVRPRSWTCRYVF
                                
CCDS64 NYEAPAAEA                
     480                        




550 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 13:12:15 2016 done: Sat Nov  5 13:12:16 2016
 Total Scan time:  3.170 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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