GENSCAN 1.0	Date run:  8-Nov-116	Time: 09:31:19

Sequence gi568815590f:94925009_95134069 : 209061 bp : 42.65% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    985    980    6                               1.05
 1.05 Term -   5720   5471  250  1  1  105   38   157 0.893   6.59
 1.04 Intr -  11545  11351  195  0  0   49   81   112 0.352   4.21
 1.03 Intr -  15212  14852  361  0  1   -4   98   238 0.372   8.95
 1.02 Intr -  15924  15822  103  0  1   48   82   148 0.057   9.03
 1.01 Init -  19627  19571   57  1  0   60   81    55 0.212   1.37
 1.00 Prom -  22423  22384   40                              -7.55

 2.09 PlyA -  23241  23236    6                               1.05
 2.08 Term -  23818  23544  275  2  2   29   46   252 0.982   9.75
 2.07 Intr -  24577  24442  136  1  1  115   36    39 0.549   0.62
 2.06 Intr -  25026  24965   62  1  2   81   75    47 0.318   0.23
 2.05 Intr -  33120  32921  200  2  2   64   89   118 0.411   7.57
 2.04 Intr -  35722  35632   91  2  1   68   81    51 0.121   0.53
 2.03 Intr -  38741  38558  184  2  1   79   37   108 0.276   3.24
 2.02 Intr -  59131  59016  116  2  2   38  100    86 0.005   4.05
 2.01 Init -  78679  78595   85  1  1   20   90    68 0.126   1.23
 2.00 Prom -  80526  80487   40                              -5.15

 3.00 Prom +  95449  95488   40                              -4.05
 3.01 Init + 100001 100197  197  1  2  109   89   198 0.043  18.45
 3.02 Intr + 106987 107090  104  1  2  112   27    86 0.007   3.80
 3.03 Intr + 109383 109399   17  1  2   69   72    17 0.028  -7.46
 3.04 Intr + 110446 110568  123  0  0   65   93   122 0.974  10.26
 3.05 Intr + 116562 116618   57  2  0  101   70    53 0.837   2.96
 3.06 Intr + 123449 123550  102  1  0   67  103    79 0.966   6.75
 3.07 Intr + 127166 127222   57  1  0  120  127    23 0.959   7.56
 3.08 Term + 132056 132157  102  1  0   79   42    78 0.478  -0.40
 3.09 PlyA + 132178 132183    6                               1.05

 4.11 PlyA - 133037 133032    6                               1.05
 4.10 Term - 138020 137799  222  2  0  106   39    39 0.066  -3.27
 4.09 Intr - 142251 142157   95  1  2  110   84    43 0.115   4.86
 4.08 Intr - 145028 144966   63  0  0  110   32    57 0.080   0.07
 4.07 Intr - 146597 146476  122  1  2   55   89    58 0.276   1.82
 4.06 Intr - 146899 146738  162  0  0   72   38   102 0.259   1.77
 4.05 Intr - 148320 147709  612  2  0   80   94   417 0.304  32.07
 4.04 Intr - 159832 159786   47  1  2   50   80    53 0.016  -3.01
 4.03 Intr - 161155 161027  129  1  0   68   94    15 0.429   0.07
 4.02 Intr - 161270 161232   39  2  0   78   97    42 0.684   1.60
 4.01 Init - 163234 162956  279  1  0   93   57   235 0.604  16.21
 4.00 Prom - 166019 165980   40                              -6.85

 5.00 Prom + 166328 166367   40                              -5.45
 5.01 Init + 170283 170500  218  2  2   86   66   138 0.454   9.61
 5.02 Intr + 177526 177664  139  1  1   12  107    48 0.281  -1.35
 5.03 Intr + 177968 178003   36  1  0  118   64    34 0.113   1.54
 5.04 Intr + 184736 184845  110  1  2   95  109    54 0.948   6.36
 5.05 Term + 189327 189507  181  0  1   50   32   158 0.548   2.50
 5.06 PlyA + 191804 191809    6                               1.05

 6.03 PlyA - 193427 193422    6                               1.05
 6.02 Term - 198851 198726  126  2  0   98   44   115 0.783   5.40
 6.01 Intr - 208951 208832  120  1  0   42   62   107 0.223   3.27

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 182325 182474  150  2  0   74   41    82 0.872   2.19


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:94925009_95134069|GENSCAN_predicted_peptide_1|321_aa
MKDELLPHLAGLLSTLSPKRLNKMFVGEVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFS
AEEEEEEEDISEESPTEHPSVFSCLPASLECLADTSDSCFLQFESCPMEESWFITPPPCF
TAGGLTTIKVETSPMENLLIEHPSMSVYAVHNSCPGLSEATRGTDELHSPSSPRKTACSS
AHRADLFLPSLIKVASFQTRCCLFTLELPSTTKQLFVSQLRAIGSVESSSSHSSRVSPRV
EAQNEMGQHIHCYVAALAAHTTFLEQPKSFRPSQWIKEHSERQPLNRNSLRRQNLTRDCH
PRQVKHNGWVVHQPCPRQYNY

>gi568815590f:94925009_95134069|GENSCAN_predicted_CDS_1|966_bp
atgaaggatgagctcctccctcacttggctgggcttctgagcactctgtcgcccaagagg
ctgaataaaatgtttgtgggtgaagtcagttcttcctccaaccaagaaccagaattcaat
gagaaagaagatgatgaatggattcttgttgacttcatagatacttgcactggtttctca
gcagaagaagaagaagaagaggaggacatcagtgaagagtcacctactgagcacccttca
gtcttttcctgtttaccggcatctcttgagtgcttggctgatacaagtgattcctgcttt
ctccagtttgagtcatgtccaatggaggagagctggtttatcaccccacccccatgtttt
actgcaggtggattaaccactatcaaggtggaaacaagtcctatggaaaaccttctcatt
gaacatcccagcatgtctgtctatgctgtgcataactcctgccctggtctcagtgaggcc
acccgtgggactgatgaattacatagcccaagtagtcccaggaaaacagcgtgcagttca
gcccacagagccgatttgtttttaccttctttgatcaaagtagcatccttccaaacaaga
tgctgtctgttcacgttggaactgccatccacaaccaagcagctctttgtcagtcagttg
agagctattggcagtgtggaatccagctcctcacacagttccagagtcagtccaagagtg
gaagctcaaaatgaaatggggcagcatattcattgttatgttgcagctcttgctgctcat
acaacttttctggaacaacccaagagctttcgcccttcccagtggataaaagaacacagt
gaaagacagcctcttaacagaaatagccttcgtcgccaaaatcttaccagggattgccac
cctcggcaagtcaagcacaatggctgggttgttcatcagccctgcccgcgtcagtacaat
tactaa

>gi568815590f:94925009_95134069|GENSCAN_predicted_peptide_2|382_aa
MLRKVNKNSLARTRQWKDGSEARHKVLKGPLVSASARKELGSPFYLNSNYKAGQAEKSTT
LLAPVRKTCCHGYLPTFTISHLVLWTFEFPEVGSAGSLGFGILYYLVRCLATALVPTRLQ
LSQPLALKGGFHERKEDINIHGLKTNTLEDTEMEHLAESQDSMATNHSSRTACAEVTTDH
HLLCWTPADSSRAGTMSERPKKRPGDNKRDIGFVGWIYKQGWSNGGRRNPERAASPAGSR
WRFLQQAFTLSSRFLLPGLVSELSAPPAGRQVTCVGDNLSQGGPGAPAPPIAWLVFLAAA
GPPPLTPPHSPPLLLLRLLSAVGWGRPFGTRRRGSRGHPRDASPKTAALGLVARRSVPAL
RSRPLRLPSEFRRPCGYGEPAP

>gi568815590f:94925009_95134069|GENSCAN_predicted_CDS_2|1149_bp
atgttaagaaaggtgaacaagaactccttagcaagaactcgccaatggaaagatggtagt
gaagccagacacaaagtgttgaagggacctctggtttctgcttctgcacgtaaggagctt
ggaagtccattctatcttaacagcaactacaaagctggacaggctgaaaaatcaacaact
cttcttgcacctgtaagaaagacctgctgtcatgggtatttgccaaccttcacaatttcc
cacctggttctttggacttttgagtttcctgaagttggctctgcaggcagcttgggtttt
ggaatcctctattacctagttagatgtctggctacggcccttgttccaacccgtctccag
ctgagccagcctctggccctcaagggtggtttccatgagaggaaagaggacataaacata
catggtctcaaaacaaacactttggaggatactgaaatggagcatttagcagaaagtcag
gactccatggccaccaaccactcctcacgaactgcctgtgccgaagtcaccactgaccac
catctgttgtgctggactcctgctgactccagtagggctggcaccatgtcagaaaggccg
aagaagagacctggagacaacaaacgagacatagggtttgttggatggatttacaaacag
ggatggtccaatggcggcaggcggaatccagagcgtgcagcaagcccggccggctctcgg
tggcggtttctacagcaggccttcacgctcagctcccggtttttgttgcccgggcttgtt
tcggagctgagcgcgccgccggccgggcgccaggtcacgtgcgttggtgacaacctctcg
cagggcggccccggggcccccgcaccgccgattgcgtggcttgttttcttggccgcggcg
ggacctcctcctctcacccctcctcactcccctccactcctcctcctccgcctgctctcg
gccgttggatggggccgccccttcgggactcggcgtcggggctcccgcggccacccccgg
gacgcatctccgaagacagcggcgcttgggcttgtggcccggcgctctgtccccgccctg
cgatcccgtcccctgcgcctgccctccgagttccggaggccctgcggctatggggaacct
gctccgtga

>gi568815590f:94925009_95134069|GENSCAN_predicted_peptide_3|252_aa
MAASAHGSVWGPLRLGIPGLCCRRPPLGLYARMRRLPGPEVSGRSVAAASGPGAWGTDHY
CLELLRKRDYEGYLCSLLLPAESRSSVFALRAFNVELAQAVFSNDPVKDSVSEKTIGLMR
MQFWKKTVEDIYCDNPPHQPVAIELWKAVKRHNLTKRWLMKIVDERHGVSQEDFLRRNQD
KNVRDVIYDIASQAHLHLKHARSFHKTVPVKAFPAFLQTVLCRRTLGGAAYVDEEVSCRL
ERWSTKLSDLPV

>gi568815590f:94925009_95134069|GENSCAN_predicted_CDS_3|759_bp
atggcggcctccgcgcacggctctgtctgggggccgttgcggcttggcatccccggcctg
tgctgccgccggccgcctctgggtctgtacgcgcgcatgcggcggctgcccgggccggag
gtgtctgggcggagcgtggctgcggccagcggaccgggcgcctggggcactgaccactac
tgcctggagctgctgcggaaacgggattatgaaggttatttatgctccctgctgctccct
gcagaatcccgaagctctgtttttgcactgagggcctttaatgtggaactggctcaggct
gttttctcaaatgacccagttaaagactcagtctctgagaaaacaattggactgatgcga
atgcagttttggaaaaaaactgtggaagatatatactgtgacaatccaccacatcagcct
gtggccattgaactatggaaggctgttaaaagacataatctgactaaaagatggcttatg
aaaatcgtcgatgaaagacatggtgtttcacaagaggactttctacggaggaaccaagat
aaaaatgtgagagatgtaatatatgacattgccagtcaagcacacttgcacctaaagcat
gctaggtcctttcacaaaactgttcctgtgaaagcatttcctgcttttcttcagacggtt
ctgtgccgcagaactctagggggcgctgcttatgtggacgaggaggtctcgtgccgctta
gaaaggtggagcacaaaactaagtgacctgcctgtttaa

>gi568815590f:94925009_95134069|GENSCAN_predicted_peptide_4|589_aa
MGIAVAEVRGSLWEAVSPGGHLVLIAMRFAGSASSITAAAVQAPGCGQPHGGGEQVAQGA
RASMASAGSASLQCCQEEFMSCLSSATRKQPDGLALPVAILTARLKSPVLAMGRQDVILD
SHHNPGWSRGSYENIAYRCKEVCRSSCCWFYLWESLVAKAKSYDSGFWHPQRKKRGDPLW
PQEAQKHCPGCARKGENLGDPPKAPLGLSTELAQLRAATRDAASFRPVGALLALSASIPS
FGPRSHISNDTLADSPASLAASLQRADASPEVVRKGGKAGQPRGSPQPWRSGAEEIVEVG
LLPLTPRALLFPQVPTALPAVYHFLAACEGICPHSCAAPSMIELWDFLIQQHQPEKAVAC
TTTHIPGLRISALNKHRAWGGTDDDVAASEMPLGAAGAEPWDWNDFCPLPSKFPQATPLP
PLGVQVPEALREAAKVTGVGSGATADLLAPTAGVGTSRTACGGGTQFMSEGAPGVMNNGS
PDWSSTQFMSEGAPGVMNNGSPDWSSNLSQPQPMHLLYLTTWFLERPMCCPDTTALTQTL
PVPSFSYPVCTSHIRQNPHLHFLRAPSPHYTTACSFEPQRFLEQQQDLL

>gi568815590f:94925009_95134069|GENSCAN_predicted_CDS_4|1770_bp
atgggcatagctgtggcagaggtgagaggcagcctgtgggaggctgtgagcccaggtggc
cacctggtccttatagccatgaggtttgcaggcagtgcctcaagcatcacagcagctgca
gtgcaggcacctggctgtggacaacctcatgggggtggcgagcaggtggcccaaggtgcc
agggccagcatggcatccgcagggtcagctagtcttcagtgctgccaagaagagtttatg
agctgcctctcctctgctaccaggaaacagcctgatgggttggcattacctgtcgctatc
ctcacagcccgattaaagtcccctgttttggccatgggtagacaggacgttattctggat
tctcaccataacccaggctggtctagaggcagttatgagaacatagcctatagatgcaag
gaagtttgtcgctcttcctgttgctggttctatttgtgggaaagtttggttgcaaaagct
aaatcctacgacagtggcttttggcatccccagaggaaaaaacggggagacccgctttgg
cctcaggaagcgcagaaacactgtcctggctgcgcgcgcaagggcgagaacctaggggac
ccgcctaaagcgccgttggggctgagcaccgaactcgcacagctccgggcagcgacccgc
gatgcggcatccttccgtccggtcggagccctcctagccctcagcgcgtctattcctagc
ttcggtccccgcagccatataagcaatgacaccctcgccgactcgcctgccagcttggcc
gcctccctgcagagggctgacgcttctccagaagttgtaagaaaaggagggaaagcaggc
caacctcgaggatctccccagccttggcgttcaggtgctgaggagatcgtcgaggttggc
ctgcttcccctcactcctcgggccttgctcttcccccaggtgcccactgccctccctgct
gtgtaccactttcttgctgcctgtgaaggtatttgtcctcactcttgtgctgctccttca
atgatagaactttgggactttctcatccagcagcaccagcctgaaaaagcagtggcttgc
accaccacacacatacctggtctcaggatctcagccctaaacaagcacagggcgtggggt
ggtacagatgatgatgtagctgcttctgagatgcccctgggcgctgctggagctgagccc
tgggactggaatgacttttgcccgctgccctcaaaattcccacaggccacaccgctacca
cctcttggggtgcaggtccctgaagccctcagggaagctgcaaaggttactggggtcggc
tctggggcaacagctgacctcttagctcccactgcaggcgtaggaacctccaggacagcc
tgtgggggtggtacacagttcatgagtgaaggagctcctggagtcatgaataatggaagt
ccagattggtcaagtacacagttcatgagtgaaggagctcctggagtcatgaataatgga
agtccagattggtcaagtaacttgtcccagccccagcccatgcatctgctgtacttaaca
acctggtttcttgaacgtcccatgtgttgcccagacaccacagctttgacacagactctt
ccagttccatctttctcatatccagtttgtacttcacacatcagacagaatccccattta
catttcctgagagcccccagcccacattatactacagcatgttcattcgaaccacaaaga
tttttggagcagcaacaggatctactttag

>gi568815590f:94925009_95134069|GENSCAN_predicted_peptide_5|227_aa
MGVKLAEKIVTLVLLEKEGCEGLVDTVIRMGSRSLILGRSLCPVASSQPRCKLKAIHPEP
QGGVQGNPAHVGRGVAVMQCQWNLLEIYSLELAGNSSLGCSGKQFMGKYFPWVPEGGALA
LQSHVPYDDKMDLCDYIGSPRLAPACFADKETEIQIGKVKMTYPRSCRQVEVNVREAHRT
AKAAGAVSSPVSDFPVISPLIPKAMFAESQWHFLELPMEVYFTGTFK

>gi568815590f:94925009_95134069|GENSCAN_predicted_CDS_5|684_bp
atgggggtgaagctagctgagaagatagtcaccttagtactgctggagaaggaaggatgt
gagggtttggtggacacagtcatccgaatgggatccaggtcattaatccttggccgctct
ctgtgcccagtggcctcctctcaaccaaggtgcaaactaaaggcaattcaccctgaaccc
cagggtggagtgcaggggaatccagcacacgtgggaagaggagttgctgttatgcagtgt
cagtggaacttgctagaaatctattccctggaacttgctggaaattcatctctaggatgc
tcaggaaagcaattcatgggaaagtatttcccatgggtacctgagggaggtgccctggct
ctacagtctcatgtaccttatgacgacaagatggacctttgtgattacattgggtcacct
agactagcccctgcctgctttgctgataaggaaactgaaattcagattggtaaagtgaaa
atgacttatccgagatcatgcaggcaggtggaggtgaatgtgagggaggcccacaggacc
gcaaaagcagctggtgctgtgagttcaccagtaagtgactttcctgtgatttccccgctt
ataccaaaagccatgtttgctgaaagtcaatggcattttctggaactgcctatggaggtg
tacttcacaggaacttttaaataa

>gi568815590f:94925009_95134069|GENSCAN_predicted_peptide_6|81_aa
GADSARSPPGPSRVCAVRSPAQPARSRRGGRAGRQRSRSQAEHHMEAATAWGFHPLKPQP
ELYIGPFQPWLEWLEYKAPSP

>gi568815590f:94925009_95134069|GENSCAN_predicted_CDS_6|246_bp
ggcgcggactctgcccgttccccgccggggccttccagggtgtgtgctgtccgcagcccc
gcgcagccggcgcgatccagacgcggtgggcgggctggccgccagcgcagccgctcgcag
gctgaacaccacatggaagctgccacagcttggggcttccaccctctgaagccacagccc
gagctctacattggcccctttcagccatggctggagtggctggaatacaaggcaccaagt
ccctag