GENSCAN 1.0	Date run:  7-Nov-116	Time: 00:21:46

Sequence gi568815587f:117886468_118099638 : 213171 bp : 47.20% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.18 PlyA -    906    901    6                               1.05
 1.17 Term -  15397  15176  222  1  0   61   50   144 0.929   4.82
 1.16 Intr -  17340  17188  153  0  0  115   94   123 0.995  15.87
 1.15 Intr -  17634  17492  143  1  2   28   94    97 0.914   4.37
 1.14 Intr -  19269  19171   99  1  0   62   95    26 0.564   0.78
 1.13 Intr -  22317  22145  173  2  2  112   93   419 0.998  44.39
 1.12 Intr -  23501  23339  163  0  1   89   86   114 0.965  10.33
 1.11 Intr -  24283  24240   44  0  2  139   68   -11 0.461  -0.12
 1.10 Intr -  25393  25301   93  0  0  106   80    25 0.836   2.58
 1.09 Intr -  27439  27310  130  2  1  114   76   119 0.999  13.05
 1.08 Intr -  28047  27925  123  1  0  130   91   156 0.996  20.66
 1.07 Intr -  30807  30703  105  1  0  115   65   137 0.599  14.29
 1.06 Intr -  31354  31248  107  0  2  108   59   -29 0.919  -3.94
 1.05 Intr -  31979  31942   38  2  2   51  110    47 0.580   0.26
 1.04 Intr -  32371  32070  302  2  2   73   76   229 0.877  16.65
 1.03 Intr -  39644  39529  116  1  2  111   69    75 0.150   7.99
 1.02 Intr -  39818  39703  116  2  2  112   89   -13 0.100   0.45
 1.01 Init -  42840  42820   21  0  0  100   84     6 0.052   1.16
 1.00 Prom -  44304  44265   40                              -6.46

 2.00 Prom +  48648  48687   40                              -6.36
 2.01 Init +  51882  51931   50  2  2   86   57    50 0.318   2.12
 2.02 Intr +  55893  55944   52  0  1  112   98   -53 0.248  -2.99
 2.03 Intr +  59885  59974   90  1  0  113   79   215 0.851  23.29
 2.04 Intr +  63859  64015  157  0  1   34   37   142 0.918   3.28
 2.05 Intr +  91186  91263   78  2  0   78  101    23 0.119   2.12
 2.06 Term +  91935  92713  779  1  2   75   40   214 0.102   8.83
 2.07 PlyA +  94548  94553    6                               1.05

 3.00 Prom +  98931  98970   40                              -4.96
 3.01 Init + 100001 100067   67  1  1   72   91   147 0.999  12.63
 3.02 Intr + 101915 102035  121  0  1  107   78    52 0.888   5.65
 3.03 Intr + 102975 103153  179  0  2   76   44   288 0.987  22.76
 3.04 Intr + 106774 106943  170  2  2   33   68   263 0.874  18.47
 3.05 Intr + 107532 107682  151  2  1   83   65    39 0.900   0.84
 3.06 Intr + 109122 109243  122  1  2   64  105   230 0.953  22.51
 3.07 Term + 112248 113174  927  2  0  132   41   624 0.591  54.26
 3.08 PlyA + 114993 114998    6                               1.05

 4.05 PlyA - 117186 117181    6                               1.05
 4.04 Term - 127413 127314  100  2  1   76   44   176 0.958   9.60
 4.03 Intr - 128274 128241   34  1  1  105  117    -2 0.965   1.68
 4.02 Intr - 129342 129226  117  1  0   68   96   173 0.969  16.54
 4.01 Init - 131281 131272   10  1  1   85   74    16 0.711  -0.37
 4.00 Prom - 132624 132585   40                              -3.86

 5.03 PlyA - 133999 133994    6                               1.05
 5.02 Term - 150870 150634  237  0  0   90   54   201 0.940  13.07
 5.01 Init - 165281 165237   45  2  0   79   91    33 0.113   1.43
 5.00 Prom - 168256 168217   40                              -3.76

 6.00 Prom + 183049 183088   40                              -2.66
 6.01 Init + 188529 188590   62  2  2   93  103    45 0.249   5.74
 6.02 Intr + 199046 199073   28  2  1   71   87    27 0.023  -0.98
 6.03 Intr + 208355 208388   34  1  1  142  123    16 0.966   8.30
 6.04 Intr + 212518 212631  114  2  0  113   89   115 0.938  14.52

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  69335  69471  137  0  2   52   48   114 0.890   1.98


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:117886468_118099638|GENSCAN_predicted_peptide_1|715_aa
MERDSHGVCSPHLVLQGPWHLPYASAGVHPSPRPPRTLAPALCPCRCASLTSSSKDPGTC
PMPLQVCSLHLVLQGPWYLPCAPAECISSKNTFSWSISSPGISSWDTSRPGISSPGISSP
GISSWDTSGPGISSPGISSWYTSRPGISRPGISSPGISSPGISSPGISGSGITFQVLIRQ
VIIRQVSTSNQGHQGEPRIQTVPTTTIHTGLDDTWLWRITRSLGPIPQPCPLQGTSLPKF
TWREGQKQLPLIGCVLLLIALVVSLIILFQFWQGHTGIRYKEQRESCPKHAVRCDGVVDC
KLKSDELGCVRFDWDKSLLKIYSGSSHQWLPICSSNWNDSYSEKTCQQLGFESAHRTTEV
AHRDFANSFSILRYNSTIQESLHRSECPSQRYISLQCSHCGLRAMTGRIVGGALASDSKW
PWQVSLHFGTTHICGGTLIDAQWVLTAAHCFFVTREKVLEGWKVYAGTSNLHQLPEAASI
AEIIINSNYTDEEDDYDIALMRLSKPLTLSAHIHPACLPMHGQTFSLNETCWITGFGKTR
ETDDKTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGGRDSCQGDSGGPLVC
EQNNRWYLAGVTSWGTGCGQRNKPGVYTKVTEVLPWIYSKMETSPVWADASGPGGAIAVL
GWIVGFGGCSFPGPGPSSVKSCSRWLYEHQVLTQTPCWCRGCHQSDCAVANQADN

>gi568815587f:117886468_118099638|GENSCAN_predicted_CDS_1|2148_bp
atggagagggacagccacggggtgtgtagccctcacctcgtcctccaaggaccctggcac
ctgccctatgcctctgcaggtgtgcatccctcacctcgtcctccaaggaccctggcacct
gccctatgcccctgcaggtgtgcatccctcacctcgtcctccaaggaccctggcacctgc
cctatgcccctgcaggtgtgcagccttcacctcgtcctccaaggaccctggtacctgccc
tgtgcccctgcagaatgcatctccagcaagaacaccttcagctggagcatctccagccca
ggcatctccagctgggacacctccaggccgggcatctccagcccaggcatctccagccca
ggcatctccagctgggacacctccgggccgggcatctccagcccaggcatctccagctgg
tacacctccaggccgggcatctccaggccgggcatctccagcccaggcatctccagccca
ggcatctccagcccgggcatctccggctctggcatcactttccaggtcctcatccggcag
gtcatcatccgccaggtcagcaccagcaaccagggccaccagggagagcccagaattcag
actgtccccaccaccacaatacacacaggcctggatgatacgtggctttggaggatcact
cgaagtttggggcccatcccacagccttgccctctccagggtacgagcctgcccaagttc
acctggcgggagggccagaagcagctaccgctcatcgggtgcgtgctcctcctcattgcc
ctggtggtttcgctcatcatcctcttccagttctggcagggccacacagggatcaggtac
aaggagcagagggagagctgtcccaagcacgctgttcgctgtgacggggtggtggactgc
aagctgaagagtgacgagctgggctgcgtgaggtttgactgggacaagtctctgcttaaa
atctactctgggtcctcccatcagtggcttcccatctgtagcagcaactggaatgactcc
tactcagagaagacctgccagcagctgggtttcgagagtgctcaccggacaaccgaggtt
gcccacagggattttgccaacagcttctcaatcttgagatacaactccaccatccaggaa
agcctccacaggtctgaatgcccttcccagcggtatatctctctccagtgttcccactgc
ggactgagggccatgaccgggcggatcgtgggaggggcgctggcctcggatagcaagtgg
ccttggcaagtgagtctgcacttcggcaccacccacatctgtggaggcacgctcattgac
gcccagtgggtgctcactgccgcccactgcttcttcgtgacccgggagaaggtcctggag
ggctggaaggtgtacgcgggcaccagcaacctgcaccagttgcctgaggcagcctccatt
gccgagatcatcatcaacagcaattacaccgatgaggaggacgactatgacatcgccctc
atgcggctgtccaagcccctgaccctgtccgctcacatccaccctgcttgcctccccatg
catggacagacctttagcctcaatgagacctgctggatcacaggctttggcaagaccagg
gagacagatgacaagacatcccccttcctccgggaggtgcaggtcaatctcatcgacttc
aagaaatgcaatgactacttggtctatgacagttaccttaccccaaggatgatgtgtgct
ggggaccttcgtgggggcagagactcctgccagggagacagcggggggcctcttgtctgt
gagcagaacaaccgctggtacctggcaggtgtcaccagctggggcacaggctgtggccag
agaaacaaacctggtgtgtacaccaaagtgacagaagttcttccctggatttacagcaag
atggagactagcccagtgtgggcagatgccagcggcccaggtggcgccattgctgtcctg
ggatggatcgtgggttttggtggatgcagcttcccagggcctggaccgtcttcggtgaaa
agctgctcccgttggctttatgagcatcaagtcctcacccagaccccctgctggtgccgt
ggatgtcaccagtcggactgtgctgtggctaaccaggctgacaactga

>gi568815587f:117886468_118099638|GENSCAN_predicted_peptide_2|401_aa
MAYAQPWVGYSPEVEPCPILPRGQPLRLESLFSKMAHGFIIIIIIIIIIIIIMIRSSLNI
LMSKTFLVVTTSGEECRWHQLDRGQDTANNPKMHKTALHENYPDKNVTNVEAEKPSDLTP
SCVRNWWVLGLTDFKNEAADPRDSGAQLASPNGSRTGASGGAACQSCAVRSHSSALGWSM
GLGALEQGVVLHGEARASEEPMEWVGGSGMAGCRSRALPRGKAAKARQEIEHSAGGPALL
GDPVHPPQPLARVLSPSLPGASRAGWLFRVRGPPSPRPPGTPAGPQAPHAAPVAAGASPS
TPPCKLREWAPALANPERGSHSAVGGLKGSSNAAKVGAQAGEVPRASEGSEDCQQAVTSH
SHLRSHYQLPEHFVSGFTTAQIPILPTANRAKGTGSRVHDW

>gi568815587f:117886468_118099638|GENSCAN_predicted_CDS_2|1206_bp
atggcctacgcccagccctgggttggctactccccagaagtggaaccttgtcccattctc
ccccgaggccagccgttgagactggaatccctcttttccaagatggcccacggattcatc
atcatcatcatcatcatcatcatcatcatcatcatcatgatcagatcttcactgaacatc
ctaatgtccaagacatttttggttgtcacaactagtggtgaggaatgccgctggcatcaa
ttggatcgaggccaggacactgctaacaaccccaaaatgcacaagacagccctccacgag
aattacccagacaaaaatgtcacaaatgttgaggctgagaaaccctccgacctcactccc
tcttgtgtccggaattggtgggttcttggtctcactgacttcaagaatgaagctgcggac
cctcgcgactcaggagcccagctggcttcacctaatggatcccgcaccggggcttcaggt
ggagctgcctgccagtcctgcgccgtgcgctcgcattcctcagcccttgggtggtcgatg
ggactgggcgccttggagcagggggtggtgctccacggggaggctcgggcctcagaggag
cccatggagtgggtgggtggctcaggcatggcgggctgcaggtcccgagccctgccccgc
gggaaggcagctaaggcccggcaagaaatcgagcacagcgccggtgggccggcactgctg
ggggacccagtacaccctccgcagccactggcccgggtgctaagtccctcattgcccggg
gccagcagggctggctggctgttccgagtgcggggcccgccaagcccacgcccacccgga
actccagctggcccgcaagcgccgcacgcagccccggttgccgctggagcctctccctcc
acacctccctgcaagctgagggagtgggctccagccttggccaacccagaaaggggctcc
cacagtgcagtgggggggctgaagggctcctcaaatgccgccaaagtgggagcccaggca
ggggaggtgccgagagcaagcgagggctctgaggactgccagcaggctgtcacctctcac
tctcacttgagaagccattatcagttaccagaacactttgtgtctggctttacaacagcc
cagattccaatcttgccaacagctaatagagccaaagggaccggttccagggtgcacgac
tggtag

>gi568815587f:117886468_118099638|GENSCAN_predicted_peptide_3|578_aa
MLPCLVVLLAALLSLRLGSDAHGTELPSPPSVWFEAEFFHHILHWTPIPNQSESTCYEVA
LLRYGIESWNSISNCSQTLSYDLTAVTLDLYHSNGYRARVRAVDGSRHSNWTVTNTRFSV
DEVTLTVGSVNLEIHNGFILGKIQLPRPKMAPANDTYESIFSHFREYEIAIRKVPGNFTF
THKKVKHENFSLLTSGEVGEFCVQVKPSVASRSNKGMWSKEECISLTRQYFTVTNVIIFF
AFVLLLSGALAYCLALQLYVRRRKKLPSVLLFKKPSPFIFISQRPSPETQDTIHPLDEEA
FLKVSPELKNLDLHGSTDSGFGSTKPSLQTEEPQFLLPDPHPQADRTLGNREPPVLGDSC
SSGSSNSTDSGICLQEPSLSPSTGPTWEQQVGSNSRGQDDSGIDLVQNSEGRAGDTQGGS
ALGHHSPPEPEVPGEEDPAAVAFQGYLRQTRCAEEKATKTGCLEEESPLTDGLGPKFGRC
LVDEAGLHPPALAKGYLKQDPLEMTLASSGAPTGQWNQPTEEWSLLALSSCSDLGISDWS
FAHDLAPLGCVAAPGGLLGSFNSDLVTLPLISSLQSSE

>gi568815587f:117886468_118099638|GENSCAN_predicted_CDS_3|1737_bp
atgctgccgtgcctcgtagtgctgctggcggcgctcctcagcctccgtcttggctcagac
gctcatgggacagagctgcccagccctccgtctgtgtggtttgaagcagaatttttccac
cacatcctccactggacacccatcccaaatcagtctgaaagtacctgctatgaagtggcg
ctcctgaggtatggaatagagtcctggaactccatctccaactgtagccagaccctgtcc
tatgaccttaccgcagtgaccttggacctgtaccacagcaatggctaccgggccagagtg
cgggctgtggacggcagccggcactccaactggaccgtcaccaacacccgcttctctgtg
gatgaagtgactctgacagttggcagtgtgaacctagagatccacaatggcttcatcctc
gggaagattcagctacccaggcccaagatggcccccgcaaatgacacatatgaaagcatc
ttcagtcacttccgagagtatgagattgccattcgcaaggtgccgggaaacttcacgttc
acacacaagaaagtaaaacatgaaaacttcagcctcctaacctctggagaagtgggagag
ttctgtgtccaggtgaaaccatctgtcgcttcccgaagtaacaaggggatgtggtctaaa
gaggagtgcatctccctcaccaggcagtatttcaccgtgaccaacgtcatcatcttcttt
gcctttgtcctgctgctctccggagccctcgcctactgcctggccctccagctgtatgtg
cggcgccgaaagaagctacccagtgtcctgctcttcaagaagcccagccccttcatcttc
atcagccagcgtccctccccagagacccaagacaccatccacccgcttgatgaggaggcc
tttttgaaggtgtccccagagctgaagaacttggacctgcacggcagcacagacagtggc
tttggcagcaccaagccatccctgcagactgaagagccccagttcctcctccctgaccct
cacccccaggctgacagaacgctgggaaacagggagccccctgtgctgggggacagctgc
agtagtggcagcagcaatagcacagacagcgggatctgcctgcaggagcccagcctgagc
cccagcacagggcccacctgggagcaacaggtggggagcaacagcaggggccaggatgac
agtggcattgacttagttcaaaactctgagggccgggctggggacacacagggtggctcg
gccttgggccaccacagtcccccggagcctgaggtgcctggggaagaagacccagctgct
gtggcattccagggttacctgaggcagaccagatgtgctgaagagaaggcaaccaagaca
ggctgcctggaggaagaatcgcccttgacagatggccttggccccaaattcgggagatgc
ctggttgatgaggcaggcttgcatccaccagccctggccaagggctatttgaaacaggat
cctctagaaatgactctggcttcctcaggggccccaacgggacagtggaaccagcccact
gaggaatggtcactcctggccttgagcagctgcagtgacctgggaatatctgactggagc
tttgcccatgaccttgcccctctaggctgtgtggcagccccaggtggtctcctgggcagc
tttaactcagacctggtcaccctgcccctcatctctagcctgcagtcaagtgagtga

>gi568815587f:117886468_118099638|GENSCAN_predicted_peptide_4|86_aa
MLNCEDSISTLGLILGVGLLLLLVSILGYSLAKWYQRGYCWEGPNFVFNLYQIRNLKDLE
MGPPFTISGHISSTDGGYMKFSNGLV

>gi568815587f:117886468_118099638|GENSCAN_predicted_CDS_4|261_bp
atgctgaactgtgaggactccatcagcaccttgggcctgatccttggcgtggggctcttg
ctgctgctcgtgtccatcctcggctacagcctggccaagtggtaccagcgcgggtactgc
tgggaggggcctaattttgtcttcaacttatatcaaatccggaacctgaaggatctggag
atgggtccacccttcaccatcagtggtcacatcagcagcacagatggtggctacatgaag
ttctccaacgggctagtctga

>gi568815587f:117886468_118099638|GENSCAN_predicted_peptide_5|93_aa
MAGFVILPFLWCVLMNQSCKATNGSSNGAPDAVHGPLDRPASLCSDVNDIEGILLRKSQL
HNRYYTPVQQEAVRVVAGQPPQQHLGFPVERGD

>gi568815587f:117886468_118099638|GENSCAN_predicted_CDS_5|282_bp
atggctggctttgttattctccccttcctgtggtgtgttttgatgaatcaaagctgtaaa
gctacaaatggttcttcaaatggagccccagatgcagtccatggacccctggaccggcct
gctagcctatgctctgatgttaatgacatcgaaggcatcctcctgagaaaatctcaactg
cacaaccgctactacaccccagttcagcaggaagcagttagagtggtcgctggccaacct
ccccaacagcacttgggttttcctgttgagaggggggactga

>gi568815587f:117886468_118099638|GENSCAN_predicted_peptide_6|80_aa
MPSSLHAQTAASFLVHHLSTSLKDNSGQAKDPDSDQPLNSLDVKPLRKPRIPMETFRKVG
IPIIIALLSLASIIIVVVLX

>gi568815587f:117886468_118099638|GENSCAN_predicted_CDS_6|240_bp
atgcccagcagccttcatgcccagacagctgcctctttcctggttcatcacctgagcacc
agtttaaaggacaactcaggacaagcaaaagatcctgacagtgatcaacctctgaacagc
ctcgatgtcaaacccctgcgcaaaccccgtatccccatggagaccttcagaaaggtgggg
atccccatcatcatagcactactgagcctggcgagtatcatcattgtggttgtcctcann