GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:27:43

Sequence gi568815590r:85228563_85441635 : 213073 bp : 38.64% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1483   1548   66  0  0   58   90    44 0.505   2.72
 1.02 Intr +  16324  16532  209  0  2   45   94    81 0.106   1.35
 1.03 Intr +  17233  17303   71  1  2   93  101     2 0.121  -0.09
 1.04 Intr +  22178  22375  198  0  0   53   52   239 0.989  15.20
 1.05 Intr +  30859  30977  119  2  2   33   99   123 0.910   7.16
 1.06 Term +  31992  32003   12  2  0  121   44     8 0.381  -3.07
 1.07 PlyA +  32088  32093    6                               1.05

 2.11 PlyA -  32556  32551    6                               1.05
 2.10 Term -  37601  37465  137  0  2   39   49   105 0.269  -1.10
 2.09 Intr -  38811  38629  183  1  0   98   78    93 0.309   8.14
 2.08 Intr -  46365  46023  343  0  1   26  115   165 0.432   7.08
 2.07 Intr -  47142  46895  248  1  2   33   85   165 0.942   6.96
 2.06 Intr -  47485  47206  280  1  1   75  -28   236 0.935   6.83
 2.05 Intr -  48501  48425   77  1  2   68   30    71 0.782  -2.38
 2.04 Intr -  48719  48588  132  0  0   38   20   143 0.465   2.20
 2.03 Intr -  49025  48933   93  0  0   69  101    58 0.155   4.22
 2.02 Intr -  61160  60955  206  1  2   73   84   107 0.762   6.72
 2.01 Init -  63006  62936   71  0  2   64   70    83 0.868   2.67
 2.00 Prom -  67360  67321   40                              -6.95

 3.12 PlyA -  68187  68182    6                               1.05
 3.11 Term -  68773  68727   47  2  2  127   48    73 0.911   3.59
 3.10 Intr -  69380  69264  117  0  0  102   97    66 0.574   8.42
 3.09 Intr -  70280  70181  100  2  1  100   55    34 0.099   0.06
 3.08 Intr - 100114 100016   99  1  0   79   42   113 0.387   5.19
 3.07 Intr - 101282 101127  156  2  0  110   80    88 0.996   9.49
 3.06 Intr - 103990 103928   63  1  0   88   92    33 0.764   1.70
 3.05 Intr - 105058 104963   96  1  0   41  113   123 0.993   9.39
 3.04 Intr - 108501 108383  119  1  2  101   80    56 0.706   5.36
 3.03 Intr - 109887 109690  198  1  0   83   99   149 0.996  13.90
 3.02 Intr - 123689 123563  127  2  1   74   77    30 0.045  -0.17
 3.01 Init - 129724 129602  123  1  0   64   89   145 0.989  12.42
 3.00 Prom - 140723 140684   40                              -3.45

 4.00 Prom + 142230 142269   40                              -5.65
 4.01 Init + 143594 143806  213  1  0   74   48   125 0.746   5.89
 4.02 Intr + 144544 144662  119  0  2   37   55   134 0.800   3.34
 4.03 Intr + 154392 154513  122  0  2   85   54    93 0.482   4.82
 4.04 Term + 156720 156778   59  1  2  119   37    65 0.567   1.37
 4.05 PlyA + 157234 157239    6                               1.05

 5.02 PlyA - 158393 158388    6                               1.05
 5.01 Sngl - 192546 191746  801  0  0   42   46   423 0.941  29.08
 5.00 Prom - 193992 193953   40                              -6.15

 6.02 PlyA - 194161 194156    6                               1.05
 6.01 Sngl - 194957 194658  300  2  0   51   42   244 0.839  11.64
 6.00 Prom - 200946 200907   40                              -3.85

 7.00 Prom + 202818 202857   40                              -5.85
 7.01 Init + 210348 210381   34  2  1  116  113    44 0.777   9.79
 7.02 Intr + 211150 211347  198  2  0   79  108   160 0.809  15.50

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:85228563_85441635|GENSCAN_predicted_peptide_1|224_aa
MQQNKQDPPPFSLGQIPGNIWRNIHDSRPEIQDSAASSDSSPRVTSPPRIQGRCPENPSC
GVRRAAEFWDQISTTGFGFLTHQATSLQSEKSHIFLFLPPRGTMSRLSWGYREHNGPIHW
KEFFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPSSAKIISNSGHSFNVDFDDTENK
SVLRGGPLTGSYRLRQVHLHWGSADDHGSEHIVDGVSYAAEVFI

>gi568815590r:85228563_85441635|GENSCAN_predicted_CDS_1|675_bp
atgcagcagaataaacaggatccaccacctttctctctaggtcaaattcctggaaatatc
tggaggaacattcacgactccaggccagaaattcaagactctgcagctagttctgactcc
agtcctagggtaacaagcccaccaagaatccagggcagatgtcctgaaaacccttcttgc
ggggtcaggagggcagcagaattttgggaccaaatctcaacaactggttttggtttcctc
actcaccaagccacaagcctgcagagtgagaagagtcacatctttctcttccttccaccc
cgagggaccatgtcgaggctcagctggggataccgcgagcacaacggtcctattcactgg
aaggaatttttccctattgctgatggtgatcagcaatctccaattgagattaaaaccaaa
gaagtgaaatatgactcttccctccgaccacttagtatcaagtatgacccaagctcagct
aaaatcatcagcaacagcggccattccttcaatgttgactttgatgacacagagaacaaa
tcagttctgcgtggtggtcctctcactggaagctacaggttacggcaggttcaccttcac
tgggggtccgctgatgaccacggctccgagcacatagtagatggagtgagctatgctgca
gaggttttcatctga

>gi568815590r:85228563_85441635|GENSCAN_predicted_peptide_2|589_aa
MTRSRLTATSASPVQAILLPQPPRVFNKYFLNHLQGQGTVNSRHDHSVLVARQVQRRLRQ
MRMKSNRHVSAVLELERGQQQTGHNAQNPVSTSAPLSCFECYCVRNWWVLGLTDFKNEAV
DPRGVKLQTFAVSVAAHKRSVDPKSEQQQDLLQRGKEQSFHGVEEDLKSRVVYFDRALIG
AFTIPELDTKVLQQPEGAGSGLGQPRKGPPQCSGGLKGSSSAAKVGAQAEEALRASKGCE
DCQHAVTSHYQSFHYGGKIQQSFTYHTYIEKSCYGTLIEECVESGKSKQWLCFTTIGQWG
VKTQVLEDTKREQIIAKTKANNSPPKSPVAFPSLYTKLQADVSLPKAGKNLFVDLGERIA
LTMNVSNCQAGNTLGVPVYDNLTREKRSLEVEGSQRWQEDEWRLQHIIEYYGPATWAEDG
SWGYCTSTYRLNRTIRLPAVLKIITNQTASALEMLSQQNQMLAAIFQNRLPLDYLLAEEG
GVYGDLNLPEGFKAPGSCRNHPYLVSKGKELLPSVKHSLFMSYNTWRVWGVTKGHTYKNV
EAEGAPSALTNSSYCSQVTGGSSRPSTDETAMEQPQIKSRLAVKSMEEG

>gi568815590r:85228563_85441635|GENSCAN_predicted_CDS_2|1770_bp
atgacgcgatcacggctcactgcaacctccgcctccccggttcaagcgattctcctgcct
cagcctcccagggttttcaacaaatacttcttgaaccacctgcaaggacaaggtactgtg
aatagcaggcatgatcattccgtgctggttgctagacaagttcaaagaaggctaagacag
atgaggatgaaatctaacagacatgtctctgccgtcttggaacttgagagaggccagcaa
cagacaggccacaatgctcagaacccagtgtccacatcagcccctctgagctgttttgag
tgttattgtgtccggaattggtgggttcttggtctcactgacttcaagaatgaagctgtg
gaccctcgcggagtgaagctgcagacctttgcagtgagtgttgcagctcataaacgcagt
gtggacccaaagagtgagcagcagcaagatttattgcaaagagggaaagaacagagcttc
cacggtgtggaagaagacctcaagagccgagtggtctattttgacagggcgctgattggt
gcgtttacaatccctgagctagacacaaaggttctccagcaacctgagggagccggctcc
ggccttggccagcccagaaaggggcccccacagtgcagcggcgggctgaagggctcctca
agtgccgccaaagtgggagcccaggcagaggaggcgctgagagcgagcaagggctgcgag
gactgccagcacgctgtcacctctcattatcagtctttccactacggaggaaaaatacaa
caatcctttacttaccatacttatatagaaaaatcctgttatggaaccttgatcgaggaa
tgtgttgaatcggggaaaagtaagcagtggctttgcttcaccacaattggacaatgggga
gtaaaaactcaagtgctagaggatacaaagagagaacagattatagccaaaacaaaagcc
aacaactcccctccaaaatcacccgtggcatttccatccctttatacaaaactacaagca
gacgtatcgcttcccaaggcaggaaaaaacctgtttgtagatctaggagaacgcatcgcc
cttaccatgaatgtgtccaattgccaggcaggcaacaccctcggagtccctgtgtatgat
aacctaaccagagaaaaacgatccttggaggtagaagggagccaaagatggcaagaggac
gagtggcgtctgcaacacatcatcgaatattacggtcctgccacttgggctgaggatggt
tcatggggttattgcacttccacatataggctaaatagaacaattagactaccagctgtt
ctaaagataatcactaaccaaaccgcctcagccctagaaatgctctcgcaacaaaaccaa
atgcttgcggcaatttttcaaaacaggctaccactagactacttattagcagaagaaggt
ggggtctatggtgatctgaatctacctgaaggttttaaagcacccggatcctgccgcaac
cacccctacttggtgtccaaaggcaaggaattgttgccatccgtgaagcattctctgttc
atgagttacaacacatggagagtatggggtgtgacaaaggggcacacctacaagaatgtg
gaggcagagggagccccttcagccctaacaaactccagctattgctcccaagtaactgga
ggctcctccaggccttccacagatgagactgcaatggagcagcctcaaatcaaatcccgg
ctggcagtaaagtccatggaagagggctga

>gi568815590r:85228563_85441635|GENSCAN_predicted_peptide_3|414_aa
MALHLKAGDEKAQQRGVTEEECSGHTSTLVMAVLSPLAFLLCCLAQILHPKKPWIIEFKT
YFLHPPLEVRLNDLDADLVFQETGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPIS
VSYNPATAKEIINVGHSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHT
VDGVKYSAELHVAHWNSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIK
TKGKRAPFTNFDPSTLLPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRS
LLSNVEGDNAVPMQHNNRPTQPLKGRTVRISTSLMATAPNLNLKICGKSCSYWAIGDSVV
AAAKARPSGFSLGPRGLTMPRAGGRAAPTGNGGQVMHLEACCSGRQGARNEETT

>gi568815590r:85228563_85441635|GENSCAN_predicted_CDS_3|1245_bp
atggcactccatctaaaagctggtgatgagaaagcacagcagcgaggtgtcacagaggag
gagtgttctggccatacctcaaccttggtcatggctgtcctgtctcctcttgccttcctc
ctttgctgtctagcccaaattttacaccctaagaagccatggatcattgagttcaaaaca
tactttctccatccaccccttgaggttaggttgaatgatttggatgcagacctggtgttt
caggagacaggtcctgaacaatggagcaagctgtatcccattgccaatggaaataaccag
tcccctgttgatattaaaaccagtgaaaccaaacatgacacctctctgaaacctattagt
gtctcctacaacccagccacagccaaagaaattatcaatgtggggcattccttccatgta
aattttgaggacaacgataaccgatcagtgctgaaaggtggtcctttctctgacagctac
aggctctttcagttccattttcactggggcagtacaaatgagcatggttcagaacataca
gtggatggagtcaaatattctgccgagcttcacgtagctcactggaattctgcaaagtac
tccagccttgctgaagctgcctcaaaggctgatggtttggcagttattggtgttttgatg
aaggttggtgaggccaacccaaagctgcagaaagtacttgatgccctccaagcaattaaa
accaagggcaaacgagccccattcacaaattttgacccctctactctccttccttcatcc
ctggatttctggacctaccctggctctctgactcatcctcctctttatgagagtgtaact
tggatcatctgtaaggagagcatcagtgtcagctcagagcagctggcacaattccgcagc
cttctatcaaatgttgaaggtgataacgctgtccccatgcagcacaacaaccgcccaacc
caacctctgaagggcagaacagtgagaattagtacttctctcatggccactgcccctaat
ctaaatctaaaaatatgcggaaagtcatgctcatattgggccataggtgattcagttgtg
gcagcagcaaaagcaaggcccagtggattcagtttgggacccagaggattaacaatgccc
agagcaggtggcagagctgctcccacagggaatggtggccaagtgatgcacctggaagcg
tgttgttctggaagacaaggtgcccgtaatgaagagactacctga

>gi568815590r:85228563_85441635|GENSCAN_predicted_peptide_4|170_aa
MDDGPYAMVELKFRREHREDPGFWEALFKKECTLYSSDGYYETKRKPTRQKYSRKQVLAM
MWRNENPCAFLVIVKEEKEIRASVGVATQTVKVTATVQDGCFVKTEKTLNGNVDTERLGN
HRQAQQHQLNCSSPTGSSYIPSCAGVGLEPMSPLPRMLEKEFIELDRELD

>gi568815590r:85228563_85441635|GENSCAN_predicted_CDS_4|513_bp
atggacgatggaccatatgccatggtagaactaaagttcagacgcgagcacagagaagac
ccaggtttttgggaggccctctttaaaaaagaatgcactttgtactcatcagacggctac
tatgaaacaaaaagaaaaccaaccagacaaaaatacagcagaaaacaagtgttggcgatg
atgtggagaaatgagaacccttgtgcatttctggtaattgtgaaggaggaaaaagaaatt
cgtgctagtgttggtgttgcaactcaaactgtaaaagttacagctacagtgcaagatggg
tgtttcgttaagacggaaaagacattaaatgggaatgtggatacggagagacttggcaac
caccggcaggcacagcagcaccagctaaattgcagctcaccaacaggcagcagttacatc
cctagttgtgctggtgtgggtctggagccaatgagcccccttccacgaatgctagagaaa
gaatttattgaattagatagagagttggactag

>gi568815590r:85228563_85441635|GENSCAN_predicted_peptide_5|266_aa
MIISIDAEKTFDKIQQPFVLKTLNKLSIDRTYLKIIRATYDKPTANIILNGQKLEAFPLQ
TGTRQGCPLSPLLFDIVLEVLARAIGQEKEIKGIQLGKEEVKLSLFADDMIEYLENPVAS
AQNLLKLISNCSKVSGYKINVQKSQAFLCATNRQTESQIMSELPFTIASKRIEYLGIQLT
GDVKDLFKEDYKPLLHEIKEDENKWKNIPCSRIGRINIVKIAILPKVIYRFNAIPIKLPM
TFFTELEKLLQNSHGTKNEPALPRRS

>gi568815590r:85228563_85441635|GENSCAN_predicted_CDS_5|801_bp
atgattatctcaatagatgcagaaaagacctttgacaaaattcaacagcccttcgttcta
aaaaccctcaataagttaagtattgataggacgtatctcaaaataatacgagctacttat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgcaa
actggcacaagacagggatgccctctctcaccactcctatttgacatagtgttggaagtt
ctggccagggcaatcgggcaggagaaagaaataaagggtattcaattagggaaagaggaa
gtcaaattgtccctgtttgcagatgacatgattgaatatttagaaaaccccgtcgcctca
gcccaaaatctcctcaagctgataagcaactgcagcaaagtctcaggatacaaaatcaat
gtgcaaaaatcacaagcattcttatgcgccactaacagacaaacagagagccaaatcatg
agtgaactcccattcacaattgcttcaaagagaatagaatacctaggaatccaacttaca
ggtgatgtgaaggacctcttcaaggaggactacaaaccactgctccatgaaataaaagag
gacgaaaacaaatggaagaacattccatgctcacggataggaagaatcaatatcgtgaaa
atagccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatg
actttcttcacagagttggaaaaactccttcaaaattcacatggaaccaaaaacgagccc
gcattgccaagacgatcctaa

>gi568815590r:85228563_85441635|GENSCAN_predicted_peptide_6|99_aa
MGLWKRPNLRLIGVPESDRENGTKLENTLQDIIQENFPNLARQANIQIQEIQRIPQRYSS
RRATPRHIIVRFTKVEMKEKTLRAAREKGQVTHKGSPSD

>gi568815590r:85228563_85441635|GENSCAN_predicted_CDS_6|300_bp
atgggactatggaaaagaccaaatctgcgtctgattggtgtacctgaaagtgacagggag
aatggaaccaagctggaaaacactctgcaggatattatccaggaaaacttccccaatcta
gcaaggcaggcgaacattcaaattcaggaaatacagagaataccacaaagatactcctcg
agaagagcaactccaagacacataattgtcagattcaccaaagtggaaatgaaggaaaaa
acgttaagggcagccagagagaaaggtcaagttacccacaaaggaagcccatcagactaa

>gi568815590r:85228563_85441635|GENSCAN_predicted_peptide_7|78_aa
MAKEWGYASHNGPDHWHELFPNAKGENQSPVELHTKDIRHDPSLQPWSVSYDGGSAKTIL
NNGKTCRVVFDDTYDRSX

>gi568815590r:85228563_85441635|GENSCAN_predicted_CDS_7|234_bp
atggccaaggagtggggctacgccagtcacaacggtcctgaccactggcatgaacttttc
ccaaatgccaagggggaaaaccagtcgcccgttgagctgcatactaaagacatcaggcat
gacccttctctgcagccatggtctgtgtcttatgatggtggctctgccaagaccatcctg
aataatgggaagacctgccgagttgtatttgatgatacttatgataggtcaann