GENSCAN 1.0	Date run:  7-Nov-116	Time: 00:33:25

Sequence gi568815595f:108730667_108953874 : 223208 bp : 38.52% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -   2403   2398    6                               1.05
 1.04 Term -   6493   6299  195  1  0   83   49   174 0.653   9.43
 1.03 Intr -  11582  11312  271  1  1   10   84   141 0.254   2.52
 1.02 Intr -  12825  12738   88  1  1   68  109    71 0.329   5.31
 1.01 Init -  15202  15136   67  1  1   60   87    46 0.144   2.99
 1.00 Prom -  15709  15670   40                              -8.45

 2.00 Prom +  17159  17198   40                              -9.95
 2.01 Sngl +  19634  20650 1017  1  0   88   43   766 0.998  68.87
 2.02 PlyA +  20668  20673    6                              -4.04

 3.00 Prom +  20750  20789   40                              -5.25
 3.01 Sngl +  21008  23290 2283  1  0   44   35   868 0.654  69.98
 3.02 PlyA +  23510  23515    6                               1.05

 4.08 PlyA -  24307  24302    6                               1.05
 4.07 Term -  25239  25112  128  1  2   78   48   143 0.629   6.76
 4.06 Intr -  25922  25842   81  0  0   86  105     6 0.380   0.79
 4.05 Intr -  26471  26393   79  2  1  109   61    96 0.013   7.21
 4.04 Intr -  43708  43675   34  0  1  115   84    13 0.245   0.91
 4.03 Intr -  47861  47691  171  1  0   79   66   131 0.443   8.14
 4.02 Intr -  49760  49664   97  0  1   92   56    41 0.574  -0.55
 4.01 Init -  53858  53825   34  2  1   66  110    40 0.632   4.08
 4.00 Prom -  81283  81244   40                              -3.05

 5.00 Prom +  85369  85408   40                              -5.05
 5.01 Init +  88367  88415   49  1  1   63  116    13 0.156   2.76
 5.02 Intr + 100004 100114  111  0  0   90  116    56 0.807   8.03
 5.03 Intr + 112048 112138   91  2  1   98   56    35 0.360  -0.57
 5.04 Intr + 116402 116463   62  2  2   77  111    46 0.619   3.26
 5.05 Intr + 118500 118588   89  1  2   41  109   109 0.670   7.07
 5.06 Term + 122954 123211  258  1  0   76   37   221 0.999  10.37
 5.07 PlyA + 123601 123606    6                               1.05

 6.02 PlyA - 123934 123929    6                               1.05
 6.01 Sngl - 125411 125241  171  2  0   83   48   164 0.986   6.48
 6.00 Prom - 125845 125806   40                              -4.15

 7.00 Prom + 127650 127689   40                              -1.45
 7.01 Init + 134980 135012   33  0  0   81  101    59 0.411   6.42
 7.02 Term + 138675 138749   75  2  0  121   39    13 0.269  -3.44
 7.03 PlyA + 139034 139039    6                               1.05

 8.11 PlyA - 139211 139206    6                               1.05
 8.10 Term - 145667 145584   84  2  0   62   39   125 0.129   1.67
 8.09 Intr - 161065 160906  160  0  1  125   86    38 0.167   6.37
 8.08 Intr - 175560 175418  143  0  2  104   -3   123 0.365   3.03
 8.07 Intr - 177543 177371  173  1  2   94   62   136 0.909  10.34
 8.06 Intr - 185548 185461   88  1  1  110   50   106 0.464   7.62
 8.05 Intr - 189919 189770  150  1  0   96  115   110 0.991  13.94
 8.04 Intr - 192301 192166  136  0  1   79   53    70 0.104   2.25
 8.03 Intr - 199090 199035   56  1  2   57   65   103 0.017   1.76
 8.02 Intr - 212012 211914   99  2  0   51  110    43 0.067   2.19
 8.01 Init - 223096 222893  204  1  0   97  116   173 0.998  19.90

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  26519  26393  127  2  1   67   61   176 0.985  11.17


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:108730667_108953874|GENSCAN_predicted_peptide_1|206_aa
MHPQLAALSMPFGTLRTNGNGIESGTGSSNDVIRPELYSPRNHVVKYSRKHSCLHSQNKS
RQKNVEKLDWLSLLASIFLPCRTLPALEHRTSSSSALGLLDLQPQTEGCTDGFPTFQVLG
LGLASLLLSLQMVCCGTLPCNHPLSRLPALAAATCTLTAALPGLQGGDSPLQSQQLNPFS
LWEQAVCTASTRQLYLLQTIVTQKQV

>gi568815595f:108730667_108953874|GENSCAN_predicted_CDS_1|621_bp
atgcatcctcaacttgctgccctctctatgccttttgggactcttagaaccaatggcaat
ggcattgaatctggaaccggatcctctaatgatgtcataagacctgagctgtattcacct
aggaatcatgttgtaaaatactcaagaaagcacagctgcctgcacagccagaataaaagc
aggcagaagaacgtggaaaaactagactggctgagtcttctggcctccatctttctccca
tgccggacacttcctgccctcgaacatcggacctcaagttcttcagctttgggactcttg
gaccttcaaccacagactgaaggctgcactgacggcttccctacttttcaggttttggga
ctcggactagcttccttgctcctcagcttgcagatggtctgctgtgggactttgccttgt
aatcatcctttgtctcggctgcctgctctggctgctgccacctgcacgcttacagctgca
ctccctggcctgcaaggaggtgactctcccttacagagtcagcagcttaaccctttctct
ctgtgggagcaagctgtatgtacagcatcaacaaggcagttatacctgttacagacaata
gtgactcagaagcaagtatga

>gi568815595f:108730667_108953874|GENSCAN_predicted_peptide_2|338_aa
MGKKQNRKTGNSKTQSASPPPKERSSSPATEQSWMENDSDELREEGFRRSNYSELREDIQ
TKGKEVENFEKNLEECITRITNTEKCLKELMELKTKARELREECRSLRSRCDQLEERVSA
IEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDVENGTKLENTLQD
IIQENFPNLARQANVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREEGWV
TLKGKPIRLTADLSAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDK
QMLRDFVTTRPALKELLKEALNMERNNRYQPLQNHAKM

>gi568815595f:108730667_108953874|GENSCAN_predicted_CDS_2|1017_bp
atggggaaaaaacagaacagaaaaactggaaactctaaaacgcagagcgcctctcctcct
ccaaaggaacgcagttcctcaccagcaacagaacaaagctggatggagaatgattctgac
gagctgagagaagaaggcttcagacgatcaaattactctgagctacgggaggacattcaa
accaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaacta
cgtgaagaatgcagaagcctcaggagccgatgcgatcaactggaagaaagggtatcagca
atagaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctg
attggtgtacctgaaagtgatgtggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacgttcagattcaggaaata
cagagaacgccacaaagatactcctcgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagaggaaggttgggtt
accctcaaaggaaagcccatcagactaacagcggatctctcagcagaaaccctacaagcc
agaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatt
tcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttatagacaag
caaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctgaaggaagcg
ctaaacatggaaaggaacaaccggtaccagccgctgcaaaatcatgccaaaatgtaa

>gi568815595f:108730667_108953874|GENSCAN_predicted_peptide_3|760_aa
MVKGSIQQEELTILNIYAPNTGAPRFIKQVLSDLQRDLDSHTLIMGDFNTPLSTLDRSTR
QKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSKIDHIVGSKALLSKCK
RTDIITNYLSDHSAIKLELRIKNLTQSRSTTWKLNNLLLNDYWVHNEMKAEIKMFFETNE
NKDTTYQNLWDAFKAVCRGKFIALNAYKRKQERSKIDTLTSQLKELEKQEQTHSKASRRQ
EITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLASLIKKKREKNQIDTIKNDKG
DITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLNQEEVESLNRPITGSEI
VAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILIP
KPGRDTTKKENFRPISLMNIDAKILNKILASRIQQHIKKLIHHDQVGFIPGMQGWFNIRK
SINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPT
ANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLS
LFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELP
FTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAIL
PKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAK

>gi568815595f:108730667_108953874|GENSCAN_predicted_CDS_3|2283_bp
atggtaaagggatcaattcaacaagaggagctaactatcctaaatatttatgcacccaat
acaggagcacccagattcataaagcaagtcctgagtgacctacaaagagacttagactcc
cacacattaataatgggagactttaacaccccactgtcaacattagacagatcaacgaga
cagaaagtcaacaaggatacccaggaattgaactcagctctgcaccaagcagacctaata
gacatctacagaactctccaccccaaatcaacagaatatacatttttttcagcaccacac
cacacctattccaaaattgaccacatagttggaagtaaagctctcctcagcaaatgtaaa
agaacagacattataacaaactatctctcagaccacagtgcaatcaaactagaactcagg
attaagaatctcactcaaagccgctcaactacatggaaactgaacaacctgctcctgaat
gactactgggtacataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgag
aacaaagacaccacataccagaatctctgggacgcattcaaagcagtgtgtagagggaaa
tttatagcactaaatgcctacaagagaaagcaggaaagatccaaaattgacaccctaaca
tcacaattaaaagaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaa
gaaataactaaaatcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaa
atcaatgaatccaggagctggttttttgaaaggatcaacaaaattgatagaccgctagca
agcctaataaagaaaaaaagagagaagaatcaaatagacacaataaaaaatgataaaggg
gatatcaccaccgatcccacagaaatacaaactaccatcagagaatactacaaacacctc
tacgcaaataaactagaaaatctagaagaaatggatacattcctcgacacatacactctc
ccaagactaaaccaggaagaagttgaatctctgaatagaccaataacaggctctgaaatt
gtggcaataatcaatagtttaccaaccaaaaagagtccaggaccagatggattcacagcc
gaattctaccagaggtacaaggaggaactggtaccattccttctgaaactattccaatca
atagaaaaagagggaatcctccctaactcattttatgaggccagcatcattctgatacca
aagccgggcagagacacaaccaaaaaagagaattttagaccaatatccttgatgaacatt
gatgcaaaaatcctcaataaaatactggcaagccgaatccagcagcacatcaaaaagctt
atccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaatatacgcaaa
tcaataaatgtaatccagcatataaacagagccaaagacaaaaaccacatgattatctca
atagatgcagaaaaagcctttgacaaaattcaacaacccttcatgctaaaaactctcaat
aaattaggtattgatgggacgtatttcaaaataataagagctatctatgacaaacccaca
gccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaactggcacaaga
cagggatgccctctctcaccactcctattcaacatagtgttggaagttctggccagggca
attaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtcc
ctgtttgcagacgacatgattgtgtatctagaaaaccccatcgtctcagcccaaaatctc
cttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatca
caagcattcttatacaccaacaacagacaaacagagagccaaatcatgagtgaactccca
ttcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaag
gacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggacacaaacaaa
tggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactg
cccaaggtaatttacagattcaatgccatccccatcaagctaccaatgactttcttcaca
gaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccgcatcgccaag
taa

>gi568815595f:108730667_108953874|GENSCAN_predicted_peptide_4|207_aa
MWFIVEYVPRPGAAVRLSSAGSQLPQHSSWEVGVGGHTSNHIGIEVGGTTTAEEQIKDRP
QGVVLEEPRPDQRILNQLGLDLMTRSGFGADKTLEVIVFCICSLFLCDNEKSLINPGSTQ
CSLDSVMDKKIKDVLNSLEYSPSPISKKLSCASVKSQGRPSSCPAGMAVTGCACGYGCGS
WDVQLETTCHCQCSVVDWTTARCCHLT

>gi568815595f:108730667_108953874|GENSCAN_predicted_CDS_4|624_bp
atgtggttcattgtggaatatgttccacgtccaggtgcagcagtgcggctgagctcagct
ggttctcagttgccacaacacagctcctgggaagtgggtgtgggtgggcacacttcgaac
cacattggcatagaggttggtgggacaaccacagcagaggagcagataaaggaccgtccc
caaggagttgtgctcgaagaaccacgcccagaccaaagaatccttaaccaattgggactt
gatctcatgacaagatctggatttggagctgataagactttggaagtaattgtattttgc
atatgttcactgtttctttgtgacaatgagaaatctctgatcaacccggggagtactcag
tgttccttagactccgttatggataagaagatcaaggatgttctcaacagtctagagtac
agtccctctcctataagcaagaagctctcgtgtgctagtgtcaaaagccaaggcagaccg
tcctcctgccctgctgggatggctgtcactggctgtgcttgtggctatggctgtggttcg
tgggatgttcagctggaaaccacctgccactgccagtgcagtgtggtggactggaccact
gcccgctgctgccacctgacctga

>gi568815595f:108730667_108953874|GENSCAN_predicted_peptide_5|219_aa
MVSSSKPVPKCQRRPEGISGCPFFLWGLLALLGLALVISLIFNISHYVEKQRQEIVMLAV
LSSILSAKLWRKTLLFKCSKALAMVDEYYIEDTPIYGNLDDMISEPMDENCYEQMKARPE
KSVNKMQEATPSAQATNETQMCYASLDHSVKGKRRKPRKQNTHFSDKDGDEQLHAIDASV
SKTTLVDSFSPESQAVEENIHDDPIRLFGLIRAKREPIN

>gi568815595f:108730667_108953874|GENSCAN_predicted_CDS_5|660_bp
atggtgtcctcaagtaagccagtccctaaatgtcagaggaggccagaaggaatctctggg
tgcccctttttcctctggggacttctagcattgttgggcttggctttggttatatcactg
atcttcaatatttcccactatgtggaaaagcaacgacaagaaattgtcatgctggcagtt
ctttccagtatcctttccgccaaactttggcgaaagacccttcttttcaagtgctctaaa
gcactggcaatggttgatgagtattatattgaagacacaccaatttatggtaacttagat
gatatgatttcagaaccaatggatgaaaattgctatgaacaaatgaaagcccgaccagag
aaatctgtaaataagatgcaggaagccaccccatctgcacaggcaaccaatgaaacacag
atgtgctacgcctcacttgatcacagcgttaaggggaagcgtagaaagcccaggaaacag
aatactcatttctcagacaaggatggagatgagcaactacatgcaatagatgccagcgtt
tctaagaccaccttagtagacagtttctccccagaaagccaggcagtagaggaaaacatt
catgatgatcccatcagactgtttggattgatccgtgctaagagagaacctataaactag

>gi568815595f:108730667_108953874|GENSCAN_predicted_peptide_6|56_aa
MELQVKRSQKGRILERRELRVEKTLEICEESPSSIQLSTGQCTQVTKLPELGEKPT

>gi568815595f:108730667_108953874|GENSCAN_predicted_CDS_6|171_bp
atggagctccaggtcaagagaagtcaaaaaggcagaatactggagagaagagagctgcgt
gtagagaaaactctggagatatgtgaagagtcgccgtcaagtattcagttaagtactggt
cagtgcacgcaagtgacaaaactacccgaacttggggaaaaacccacctga

>gi568815595f:108730667_108953874|GENSCAN_predicted_peptide_7|35_aa
MIVRLPQTRGNEIFGNVWRHFVYTGTTCGGDASGI

>gi568815595f:108730667_108953874|GENSCAN_predicted_CDS_7|108_bp
atgattgtgaggcttccccagacgcgtggaaatgagatatttggtaacgtctggagacat
tttgtgtatacaggcacaacctgtggtggggatgctagtggcatctag

>gi568815595f:108730667_108953874|GENSCAN_predicted_peptide_8|430_aa
MGNGKSIAGDQKAVPTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQV
YNTFDTNKVPNGPMVLRAAFKPGNMVKGPLGEFFNPIPAGQKRTKSEEIQKKKGIEEVQW
DMDEAGNHHSQQTNTGTENQTPHVLTHKWELNNENTWTQGGACRRDGFVDFLEFIAAVNL
IMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKID
INNDGELTLEEFINGMAKDQDLLEIVYKSFDFSNVLRVICNGKQPDMETDSSKSPDKAGL
GKDSTTSAHPTQRKEKEMMGECKEEVGTLAGTADSKLEYKRRAWESGKPGASSGHLLPVE
TSFVKIKKKEQLFFINHFFLKPGENISLTTASSALMASPDSLKGYKFLKNKTPTRLAASI
REQCSSANHC

>gi568815595f:108730667_108953874|GENSCAN_predicted_CDS_8|1293_bp
atggggaatggcaaatctatagctggtgatcagaaagcagttcctacacaagagacccat
gtgtggtacagaacatttatgatggaatatccatccggcctgcaaacactacatgaattt
aagacacttttgggtctgcaaggtctgaatcagaaggccaataaacatattgatcaagtt
tataatacctttgacacgaacaaggttccaaatggacccatggtgttaagggctgctttt
aaacctggtaatatggtgaagggtcccctaggggaattcttcaatcccatcccagcaggg
cagaagaggacaaaatctgaagaaattcagaagaagaaaggcattgaagaagttcagtgg
gacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaa
acacctcatgttctcactcataagtgggagttgaacaatgagaacacatggacacaggga
ggggcctgtcggcgggatggatttgttgactttttggagtttattgctgctgtaaatcta
atcatgcaagaaaaaatggagcaaaaattaaaatggtattttaagctgtatgatgctgat
ggaaatggttctattgacaaaaatgaactactggacatgttcatggcggtacaagccctc
aatggccagcaaactctgagtcctgaagaattcatcaacttggtgttccataagatcgat
ataaacaatgatggggaattgactttagaagaatttatcaatggcatggcaaaagatcag
gatctcctggagattgtttacaagagcttcgacttctccaatgtgctgagagtaatctgt
aatgggaagcagccagacatggagacagactcctccaaatctcctgacaaggctggtcta
gggaaggactcaaccacctccgcacaccccactcagaggaaagagaaggagatgatggga
gagtgcaaggaggaagttgggacactggcaggaacagcagacagcaagttggaatacaag
agaagggcttgggagtcaggcaagcctggggcatcctcagggcatttgcttccagtagag
accagcttcgtcaaaattaaaaagaaggagcagctttttttcatcaatcactttttttta
aaaccaggggaaaatatttccctcacaactgcttcgtctgcactcatggcttcaccagat
agcttaaagggctataaatttctgaaaaataaaacaccaactcgcctagcagccagcatc
cgagaacaatgtagctctgccaaccactgctaa