GENSCAN 1.0	Date run:  8-Nov-116	Time: 09:41:02

Sequence gi568815597f:110351217_110556348 : 205132 bp : 46.56% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -  14124  14086   39  0  0   90   81    48 0.179   2.72
 1.05 Intr -  25945  25734  212  2  2   48  105   182 0.992  14.53
 1.04 Intr -  28140  27637  504  1  0   81  110    89 0.687   3.35
 1.03 Intr -  29927  29766  162  0  0   90   98    48 0.969   5.95
 1.02 Intr -  30579  30436  144  1  0   82  117    17 0.940   4.25
 1.01 Init -  31729  31618  112  1  1   59   75    63 0.473   2.47
 1.00 Prom -  34598  34559   40                              -6.36

 2.00 Prom +  38869  38908   40                              -3.06
 2.01 Init +  45232  45307   76  0  1   98   68    96 0.602   8.03
 2.02 Term +  45349  45455  107  2  2   90   37    51 0.535  -1.23
 2.03 PlyA +  45935  45940    6                               1.05

 3.05 PlyA -  46193  46188    6                               1.05
 3.04 Term -  50367  50307   61  2  1   98   44    63 0.620   0.18
 3.03 Intr -  52820  52703  118  0  1   96   92    49 0.672   5.62
 3.02 Intr -  55163  55102   62  1  2   45   81    42 0.512  -2.42
 3.01 Init -  56650  56370  281  1  2  104   94    71 0.604   5.79
 3.00 Prom -  85725  85686   40                              -3.86

 4.00 Prom +  99550  99589   40                              -4.26
 4.01 Init + 100001 100072   72  1  0   78   98    37 0.630   3.32
 4.02 Intr + 102745 102870  126  0  0  130   73   146 0.991  18.18
 4.03 Term + 105016 105135  120  0  0  107   48   123 0.996   8.67
 4.04 PlyA + 106120 106125    6                               1.05

 5.06 PlyA - 106829 106824    6                              -0.45
 5.05 Term - 107478 107173  306  0  0   66   43   131 0.484   1.52
 5.04 Intr - 112507 112345  163  0  1   81   99     2 0.203   0.58
 5.03 Intr - 113152 112984  169  2  1   64   69   137 0.489   8.40
 5.02 Intr - 115153 115055   99  2  0   54  109    78 0.715   6.58
 5.01 Init - 117478 117421   58  1  1   84   95    53 0.984   7.07
 5.00 Prom - 125407 125368   40                              -1.96

 6.00 Prom + 129489 129528   40                              -3.96
 6.01 Init + 129550 129611   62  0  2   72  109    33 0.984   4.68
 6.02 Intr + 131559 131709  151  0  1   92   76   152 0.995  14.56
 6.03 Intr + 132698 132815  118  1  1   97   72   144 0.976  13.74
 6.04 Intr + 133490 133728  239  0  2   -2  103   151 0.434   4.93
 6.05 Intr + 135640 135794  155  0  2   99   12   217 0.905  14.07
 6.06 Intr + 137286 137418  133  0  1   42   94   100 0.198   6.65
 6.07 Intr + 138158 138355  198  1  0  -85   78   317 0.837  12.95
 6.08 Intr + 138956 139054   99  1  0   19   80   189 0.999  11.51
 6.09 Term + 139818 139955  138  2  0  107   38   132 0.886   8.06
 6.10 PlyA + 140034 140039    6                               1.05

 7.04 PlyA - 142332 142327    6                              -0.45
 7.03 Term - 143024 142893  132  2  0   98   35    73 0.137   1.09
 7.02 Intr - 150599 150405  195  2  0   78   47    94 0.206   3.91
 7.01 Init - 153211 153110  102  1  0   64   50    56 0.085  -0.36
 7.00 Prom - 158985 158946   40                              -4.16

 8.07 PlyA - 160116 160111    6                               1.05
 8.06 Term - 167572 166036 1537  0  1   99   43  1872 0.068 173.75
 8.05 Intr - 179109 178990  120  2  0   76   47    73 0.024   1.61
 8.04 Intr - 182240 182180   61  0  1   85   64    67 0.032   1.79
 8.03 Intr - 197675 197601   75  0  0   26   95   127 0.405   6.69
 8.02 Intr - 198218 198140   79  2  1   45   75    49 0.163  -1.58
 8.01 Intr - 200009 199956   54  2  0   97   75    30 0.056   1.78

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:110351217_110556348|GENSCAN_predicted_peptide_1|391_aa
MTKTFAIFFVVFQEEFEGTSEQIGWIGSIMSSLRFCAGPLVAIICDILGEKTTSILGAFV
VTGGYLISSWATSIPFLCVTMGLLPGLGSAFLYQVAAVVTTKYFKKRLALSTAIARSGMG
LTFLLAPFTKFLIDLYDWTGALILFGAIALNLVPSSMLLRPIHIKSENNSGIKDKGSSLS
AHGPEAHATETHCHETEESTIKDSTTQKAGLPSKNLTVSQNQSEEFYNGPNRNRLLLKSD
EESDKVISWSCKQLFDISLFRNPFFYIFTWSFLLSQLAYFIPTFHLVARAKTLGIDIMDA
SYLVSVAGILETVSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYT
ICFAIFAGGYLALILPVLNKEEMKQADQKKK

>gi568815597f:110351217_110556348|GENSCAN_predicted_CDS_1|1173_bp
atgaccaagacttttgcaattttctttgtggtctttcaagaagagtttgaaggcacctca
gagcaaattggttggattggatccatcatgtcatctcttcgtttttgtgcaggtcccctg
gttgctattatttgtgacatacttggagagaaaactacctccattcttggggctttcgtt
gttactggtggatatctgatcagcagctgggccacaagtattccttttctttgtgtgact
atgggacttctacccggtttgggttctgctttcttataccaagtggctgctgtggtaact
accaaatacttcaaaaaacgattggctctttctacagctattgcccgttctgggatggga
ctgacttttcttttggcaccctttacaaaattcctgatagatctgtatgactggacagga
gcccttatattatttggagctatcgcattgaatttggtgccttctagtatgctcttaaga
cccatccatatcaaaagtgagaacaattctggtattaaagataaaggcagcagtttgtct
gcacatggtccagaggcacatgcaacagaaacacactgccatgagacagaagagtctacc
atcaaggacagtactacgcagaaggctggactacctagcaaaaatttaacagtctcacaa
aatcaaagtgaagagttctacaatgggcctaacaggaacagactgttattaaagagtgat
gaagaaagtgataaggttatttcgtggagctgcaaacaactgtttgacatttctctcttt
agaaatcctttcttctacatatttacttggtcttttctcctcagtcagttagcatacttc
atccctacctttcacctggtagccagagccaaaacactggggattgacatcatggatgcc
tcttaccttgtttctgtagcaggtatccttgagacggtcagtcagattatttctggatgg
gttgctgatcaaaactggattaagaagtatcattaccacaagtcttacctcatcctctgc
ggcatcactaacctgcttgctcctttagccaccacatttccactacttatgacctacacc
atctgctttgccatctttgctggtggttacctggcattgatactgcctgtactgaacaaa
gaggagatgaaacaagcagaccagaagaaaaag

>gi568815597f:110351217_110556348|GENSCAN_predicted_peptide_2|60_aa
MAGCRFQALPCGEAAKAWREIERSAAAGLGAKPLTARGRQGWRASLSECGARQAHTHPEL

>gi568815597f:110351217_110556348|GENSCAN_predicted_CDS_2|183_bp
atggcgggctgcaggttccaagccctgccctgcggggaggcagctaaggcctggcgagaa
atcgagcgcagcgccgctgctggcctgggtgctaagcccctcactgcccggggccggcag
ggctggcgggccagcctctccgagtgcggggcccgccaagcccacacccacccggaactc
tag

>gi568815597f:110351217_110556348|GENSCAN_predicted_peptide_3|173_aa
MEPGAGHLDGHRAGSPSLRQALCDGSAVMFSSKERGRCTVINFVPLEAPLRSTPRSRQVT
EACGGEGRAVPLGSEPEWSVGGMEATLEQHLEDTMKNPSIVGVLCTDSQGLNLGCRGTLS
DEHAGVISVLAQQAAKLTSDPTDIPVVCLESDNGNIMIQKHDGITVAVHKMAS

>gi568815597f:110351217_110556348|GENSCAN_predicted_CDS_3|522_bp
atggagccaggtgcaggtcacctcgacggtcaccgcgcggggagcccaagccttcgtcag
gctctgtgcgacggaagcgcagtgatgttttccagtaaagaacgcggacgttgcaccgtg
atcaattttgtccctttggaggcgccgttacggtccacgccccgctcgcgtcaagtgact
gaggcctgtggtggagaaggacgtgccgtgccgctgggttctgagccggagtggtcggtg
ggtgggatggaggcgaccttggagcagcacttggaagacacaatgaagaatccctccatt
gttggagtcctgtgcacagattcacaaggacttaatctgggttgccgcgggaccctgtca
gatgagcatgctggagtgatatctgttctagcccagcaagcagctaagctaacctctgac
cccactgatattcctgtggtgtgtctagaatcagataatgggaacattatgatccagaaa
cacgatggcatcacggtggcagtgcacaaaatggcctcttga

>gi568815597f:110351217_110556348|GENSCAN_predicted_peptide_4|105_aa
MRGATRVSIMLLLVTVSDCAVITGACERDVQCGAGTCCAISLWLRGLRMCTPLGREGEEC
HPGSHKVPFFRKRKHHTCPCLPNLLCSRFPDGRYRCSMDLKNINF

>gi568815597f:110351217_110556348|GENSCAN_predicted_CDS_4|318_bp
atgagaggtgccacgcgagtctcaatcatgctcctcctagtaactgtgtctgactgtgct
gtgatcacaggggcctgtgagcgggatgtccagtgtggggcaggcacctgctgtgccatc
agcctgtggcttcgagggctgcggatgtgcaccccgctggggcgggaaggcgaggagtgc
caccccggcagccacaaggtccccttcttcaggaaacgcaagcaccacacctgtccttgc
ttgcccaacctgctgtgctccaggttcccggacggcaggtaccgctgctccatggacttg
aagaacatcaatttttag

>gi568815597f:110351217_110556348|GENSCAN_predicted_peptide_5|264_aa
MRLSDIGKGESPDDHRGQAAAKTLACQTSSPEIQIQWLWDAAQDPGYFTSTPASGELKHI
REKIVRSFLDILLVYLTEEIPPGNASVVCWLQHVGAIFIIAIVQMGKLRYTETNMSVTDA
QQSLSSRQGAETGKDLLDKRTINHILPVTWTKWSSQDPSTAPQGGSQFRKGSTKVHQAAV
NGTSRKAMNVKGQAMVKMESWTWKGTLYPGPEPETKGESDSRAARRSQVTTAGDNVRKRR
QKQKQKQTKKGPCGGLAWLKWVLE

>gi568815597f:110351217_110556348|GENSCAN_predicted_CDS_5|795_bp
atgaggctcagtgacattggcaagggtgaaagcccagatgaccacaggggccaggcagct
gctaaaactctagcttgccagacttcctctccagaaatccagatccagtggctctgggat
gcggcacaggaccctgggtacttcacaagcaccccagcttctggggaattgaagcacatc
cgagaaaagattgttcgttccttcctggacatcttattggtttacctcactgaagagatc
cctccaggtaatgctagtgtggtgtgctggttacaacacgtaggtgctatttttattatt
gccattgtacagatggggaaactgaggtacacagaaacaaatatgtctgtgactgacgcg
cagcagagtctatcgagtaggcagggggctgagacaggaaaggatcttttggacaaaagg
accataaatcatatccttcctgtgacctggaccaagtggtcttcccaagacccaagcact
gcccctcagggagggtcacaatttagaaagggctccacaaaagtccaccaggcagcagtc
aatggtacctcgagaaaagctatgaatgtcaaaggacaagccatggtcaaaatggaatcc
tggacgtggaagggaactttatatccaggacctgagcctgaaaccaagggagaaagcgac
tcaagggctgcaagaaggtcccaagtcaccacagcaggtgacaatgtccgtaaaaggaga
caaaaacaaaaacaaaaacaaacaaagaaaggaccctgtgggggcctggcctggcttaag
tgggtcctggagtaa

>gi568815597f:110351217_110556348|GENSCAN_predicted_peptide_6|430_aa
MRGLVVFLAVFALSEVNAITRVPLHKGKSLRRALKERRLLEDFLRNHHYAVSRKHSSSGV
VASESLTNYLDCQYFGKIYIGTLPQKFTLVFDTGSPDIWVPSVYCNSDACQRIASIEAIF
LQGLLRGSALAGTVSGEKILRAPLTLGLCFRKPPTLRSVQVLHPQNMGKSLSIQYGTGSM
RGLLGYDTVTDLVEVMILLQVSNIVDPHQTVGLSTQEPGDVFTYSEFDGILGLAYPSLAS
EYALRLGFRNDQGSMLTLRAIDLSYYTGSLHWIPMTARILAVHCGQEGPGEGGLDEAILH
TFGSVIIDGVVVACDGGCQAILDTGTSLLVGPGGNILNIQQAIGATAGQYNEFDIDCGRL
SSIPTAVFEIHGKKYPLPPSAYTSQDQGFCTSGFQGDYSSQQWILGNVFIWEYYSVFDRT
NNRVGLAKAV

>gi568815597f:110351217_110556348|GENSCAN_predicted_CDS_6|1293_bp
atgaggggccttgtggtattccttgcagtctttgctctctctgaggtcaatgccatcacc
agggttcctctgcacaaagggaagtcgctgaggagggccctgaaggagcgcaggctcctg
gaggacttcctgaggaatcaccattatgcagtcagcaggaagcactccagctctggggtg
gtggccagcgagtctctgaccaactacctggattgtcagtactttgggaagatctacatc
gggacccttccccagaagttcaccttggtgtttgatacaggctccccggatatctgggtg
ccctctgtctactgcaacagtgatgcctgtcagagaattgccagtattgaggccatattc
ttacaaggcctgctgaggggttcggccctggctggcaccgtgagtggtgagaagattcta
agggccccactaactctgggtctgtgtttcagaaaaccaccaacgcttcgatccgtccaa
gtcctccacccacagaacatgggcaagtccctgtccatccagtatggcacaggcagcatg
cggggcttgctgggctatgacactgtcaccgacctagtggaggtcatgattctcttgcag
gtctccaacattgtggacccccaccagactgtgggtctgagcacccaggaacctggcgac
gtcttcacctactccgagtttgatgggatcctggggctggcctatccctctcttgcctct
gagtacgcgctgcgccttggtttcaggaatgaccaggggagcatgctcacgctgagggcc
attgatctgtcgtactacacaggctccctgcactggatacccatgactgcaagaatactg
gcagttcactgtggacaggaaggacctggggagggagggctggatgaggccatcttgcat
acctttggaagtgtcatcattgacggcgtggtggtggcctgtgacggtggctgtcaggcc
atcctggacaccggcacctccctgctggtggggcctggcggcaacatcctcaacatccag
caggccattggagccactgcgggccagtacaatgagtttgacatcgactgcgggcgcctg
agcagcattcccacggctgtcttcgagatccacggcaagaagtaccccctgccaccctcc
gcctataccagccaggaccagggcttctgcaccagtggtttccagggtgactatagttcc
cagcagtggatcctggggaatgtcttcatctgggagtattacagtgtctttgacaggacc
aataaccgtgtggggctggcgaaggctgtctga

>gi568815597f:110351217_110556348|GENSCAN_predicted_peptide_7|142_aa
MFPGLAAATPQWNPPPPMGIEGTPPQSCPMTVAEQARESTSKTESTGFANQTHCFGVFYL
LQASHKIQSTLKTRGLHKGMLTRKQGLLEAILEGYQPQGVGPLHKQTTDVLVAPSQSLLI
HHLAQPSEGLTTETNVDPVPEP

>gi568815597f:110351217_110556348|GENSCAN_predicted_CDS_7|429_bp
atgttccctggcttagcagcagcgactcctcagtggaacccaccaccgcccatgggcata
gagggcaccccaccacagagctgtcctatgacggtggcagagcaagcaagagagagtaca
agcaagacagaatccacgggctttgcaaaccaaacgcattgctttggtgtcttctatttg
ttacaagcaagtcacaaaatccagtccacactcaagacgagagggttacacaagggcatg
ctgaccaggaagcagggattactggaggccattttggaaggttatcaaccacagggggta
ggccctcttcataagcaaaccacggatgtgctggtggccccttcccaaagcctcctcatt
caccacctggcacagccctcagaaggcctgaccacagagaccaatgtggaccccgtccca
gaaccataa

>gi568815597f:110351217_110556348|GENSCAN_predicted_peptide_8|641_aa
IPCRGEHISGSPVSHIKQTTGGRVKAKAFKGVQNSSSNVTTIGRGQLVLKALTKAVHEKK
TRPGYCQTPAGTDTTVPTSGSSAALASGASRWAEAHRKLFSARQGPVTEETRKAMPDLIS
QSRKVSYEQGMDVCGWKEMEVALVNFDNSDEIQEEPGYATDFDSTSPKGRPGGSSFSNGK
ILISESTNHETAFSKLPGDYADPPGPEPVVLNEGNQRVIINIAGLRFETQLRTLSQFPET
LLGDREKRMQFFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPANVPIDIFADEISFYE
LGSEAMDQFREDEGFIKDPETLLPTNDIHRQFWLLFEYPESSSAARAVAVVSVLVVVISI
TIFCLETLPEFREDRELKVVRDPNLNMSKTVLSQTMFTDPFFMVESTCIVWFTFELVLRF
VVCPSKTDFFRNIMNIIDIISIIPYFATLITELVQETEPSAQQNMSLAILRIIRLVRVFR
IFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEVDEPESHFSSIPD
GFWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETEN
EEKQNIPGEIERILNSVGSRMGSTDSLNKTNGGCSTEKSRK

>gi568815597f:110351217_110556348|GENSCAN_predicted_CDS_8|1926_bp
atcccctgccgaggagagcacatctcaggatcacctgtcagccacatcaagcagacaaca
ggaggcagggtaaaggctaaggccttcaagggggtccagaacagcagcagcaatgtaacg
actatagggagagggcagcttgtgctgaaggctcttaccaaggctgtccacgagaagaag
acccgtccaggctactgtcagaccccagctggaactgacactacagtgcccaccagcggc
agctcagctgccctggcatctggagccagcaggtgggcggaggcccatcgtaaactcttc
agtgccaggcaggggccagtcactgaggagaccaggaaagcgatgcctgacttgatcagc
cagtcacgcaaggtctcctatgagcagggaatggatgtgtgtggctggaaagaaatggag
gttgcgctggtcaattttgataattcagatgaaatccaagaagagccaggctatgccaca
gacttcgactcaaccagcccaaaaggccggcctgggggcagctccttctccaacgggaag
atcctcatcagcgaaagcaccaaccatgagacggccttctccaagcttccgggagactat
gctgaccccccagggcctgagccagtggtcctaaatgaaggaaaccagcgggtgatcatc
aacattgctgggctgagatttgagacccagctcagaacccttagtcagttcccagagact
ctcctgggagaccgggaaaaaaggatgcagttctttgactccatgagaaatgagtatttc
tttgatcggaaccggcccagttttgatggaatcctatattattaccaatctggtgggaaa
attcggcgcccagccaatgttcccattgatatctttgctgatgaaatctccttctatgag
ctgggtagtgaggccatggaccagttccgggaggatgaaggcttcatcaaagaccctgaa
acactgctacccaccaatgacatccaccgtcagttctggctcctctttgagtaccctgaa
agttccagcgctgcccgtgctgtggccgtggtctcggtgttggttgtggtcatctccatc
accatcttctgcctggagacactgccagagttccgggaggatagggagctaaaggtggtc
agagaccccaatctcaacatgagcaagacagtcctctcccagaccatgttcaccgaccct
ttcttcatggtggagtctacctgcatcgtgtggttcaccttcgagctggtgctccggttc
gtggtctgccccagcaagactgacttcttcaggaacatcatgaacatcattgacatcatc
tccattatcccctactttgcaactctcatcacagagctagtccaggagacagagccgagt
gcccaacagaacatgtccctggccatcctgaggatcatccgcctggtgagggtcttccgc
atcttcaagctctcgcgccactccaaggggctgcagatcctcgggcaaacactgaaggcg
tccatgcgggagttggggttgctcatcttctttctcttcattggagtcatcctcttctcc
agtgcagtctactttgctgaggtggatgagccagagtcccatttctctagcattcctgat
ggcttctggtgggcagtggtcaccatgacaactgtaggctatggggacatgtgcccgacc
accccaggggggaagattgtgggcactctgtgtgccattgcaggggtcctcaccattgcc
ctccctgtgcctgtcattgtctccaacttcaattacttctaccaccgggagactgagaat
gaagaaaagcagaacatcccaggagaaattgaaagaatcctcaacagtgtaggctcaaga
atgggcagcacagactctcttaataagaccaatggtggctgttccacagagaagtctagg
aaatga