GENSCAN 1.0	Date run:  7-Nov-116	Time: 00:33:59

Sequence gi568815582f:66479608_66688116 : 208509 bp : 47.29% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +    979   1318  340  1  1   53   55   214 0.417   8.61
 1.02 PlyA +   2674   2679    6                              -0.45

 2.03 PlyA -   2793   2788    6                               1.05
 2.02 Term -   5451   5242  210  0  0   55   53   168 0.565   7.29
 2.01 Init -   6121   5801  321  1  0   78   80   189 0.949  12.44
 2.00 Prom -  10165  10126   40                              -6.16

 3.00 Prom +  10846  10885   40                              -8.46
 3.01 Init +  11434  11775  342  0  0  108  102    66 0.762   5.34
 3.02 Intr +  13355  13522  168  1  0  111   81   170 0.958  18.74
 3.03 Term +  13931  14155  225  1  0   62   37   117 0.351   0.78
 3.04 PlyA +  15009  15014    6                               1.05

 4.00 Prom +  18797  18836   40                              -4.96
 4.01 Sngl +  20917  21828  912  0  0   75   39   284 0.811  18.50
 4.02 PlyA +  22666  22671    6                               1.05

 5.10 PlyA -  22886  22881    6                               1.05
 5.09 Term -  32459  32361   99  2  0   97   49    48 0.765  -0.07
 5.08 Intr -  34204  34124   81  1  0   97  119    42 0.867   8.03
 5.07 Intr -  37608  37529   80  1  2   45   99    51 0.908   1.17
 5.06 Intr -  38270  38182   89  1  2   63   66    98 0.198   4.71
 5.05 Intr -  49460  49387   74  2  2  131   79    18 0.789   3.40
 5.04 Intr -  51862  51773   90  1  0   92   96    54 0.914   6.79
 5.03 Intr -  57410  57357   54  2  0  120  105    48 0.993   8.88
 5.02 Intr -  62346  62272   75  0  0   67   77    87 0.923   5.21
 5.01 Init -  62887  62885    3  1  0   70   66     0 0.035  -4.00
 5.00 Prom -  63200  63161   40                              -8.26

 6.00 Prom +  64401  64440   40                              -0.46
 6.01 Init +  73109  73186   78  1  0   88   81   102 0.957  10.56
 6.02 Intr +  78583  78741  159  0  0   97   89    15 0.806   2.68
 6.03 Intr +  83515  83610   96  0  0   92   98   103 0.958  11.91
 6.04 Term +  83644  83742   99  0  0   67   40     7 0.201  -8.07
 6.05 PlyA +  83824  83829    6                               1.05

 7.00 Prom +  85326  85365   40                              -5.16
 7.01 Init +  86907  87353  447  2  0  105   85   284 0.603  25.77
 7.02 Intr +  92179  92271   93  0  0   13  116    46 0.319   0.06
 7.03 Intr +  97497  97595   99  2  0  105   98    39 0.920   6.91
 7.04 Intr +  99485  99718  234  1  0   71   59   126 0.320   5.89
 7.05 Intr + 100013 100285  273  1  0  -33   85   281 0.315  13.43
 7.06 Intr + 100419 100577  159  2  0   97   84    71 0.993   7.78
 7.07 Intr + 107390 107491  102  1  0  101   89   119 0.999  13.67
 7.08 Term + 108312 108512  201  2  0   76   38   146 0.897   5.79
 7.09 PlyA + 111646 111651    6                               1.05

 8.00 Prom + 119231 119270   40                              -1.96
 8.01 Init + 125199 125345  147  2  0   95  109   141 0.572  16.99
 8.02 Intr + 128702 128857  156  1  0  128   77   135 0.996  16.61
 8.03 Intr + 129828 129923   96  2  0   93   72   210 0.983  20.11
 8.04 Intr + 130276 130396  121  0  1  115  121   196 0.998  25.67
 8.05 Intr + 133286 133363   78  0  0  125   35    50 0.481   2.92
 8.06 Term + 138420 138529  110  1  2  116   49    59 0.344   3.47
 8.07 PlyA + 139653 139658    6                               1.05

 9.05 PlyA - 140999 140994    6                               1.05
 9.04 Term - 142615 142451  165  1  0   69   55   273 0.672  20.02
 9.03 Intr - 143895 143797   99  0  0  102   91    20 0.935   4.01
 9.02 Intr - 156974 156798  177  2  0   81   79   132 0.813  11.72
 9.01 Intr - 196157 196134   24  2  0   85  103    53 0.355   4.72

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  69402  69371   32  1  2  106  103    22 0.832   3.35


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:66479608_66688116|GENSCAN_predicted_peptide_1|113_aa
XYEECVGPGATQLYVPTDAPPPYSLTDSCPTLDGTSDSGSGHSPGRHQQEQRTPAQGGLH
TVSMDTLPPYEAVCGAGPPSGLLPLPGPDPGPRGSQGSPTPTRAPASGPERIV

>gi568815582f:66479608_66688116|GENSCAN_predicted_CDS_1|342_bp
nnctacgaggagtgtgtggggccaggggccactcagctgtatgtccccacggacgcacca
ccaccctactcgctgactgattcctgccccacgctggatggcacctccgactcaggcagc
ggccacagccctggccgacaccagcaggagcagaggaccccggcccaaggtggccttcac
acggtctccatggacacccttcccccctacgaggctgtgtgcggggctggccccccatca
ggcctgctgccactgccgggcccagacccagggccaaggggctcccagggctcacccacc
ccaacccgggccccagcctctggcccagagaggattgtgtga

>gi568815582f:66479608_66688116|GENSCAN_predicted_peptide_2|176_aa
MLVRWSVVAWLRWGRQGLRTCNLGFLGDMLGWHNWAATLGVKICPAPKPRDTRPDLGNQS
WAPESSSGPEDVQCGVKQSRDQDRRFTSSDDEAYCLSTAHAKSLDMQQLLEPFAETWDLT
TPIHGDPMMALVDYHDGVIASTVTPLKTFFWPEEPIWPPQGAGMNILQRAASKNVC

>gi568815582f:66479608_66688116|GENSCAN_predicted_CDS_2|531_bp
atgctggtgagatggtcagtggtggcatggctgaggtggggacggcagggcctgaggacc
tgcaaccttggatttcttggagacatgttgggctggcacaactgggctgccaccctgggg
gtaaagatctgcccagcccccaagcccagagatacccggcctgatctaggcaaccagtcc
tgggctccagagagttcctctggccccgaggacgtgcaatgtggggtgaagcaaagcaga
gaccaggacagaagattcacttcctcagacgatgaagcttactgtctctccaccgctcat
gccaagagcctggacatgcagcagctgctggagccctttgcagagacctgggacctcacc
acacccatacacggggacccaatgatggctcttgtggactatcacgatggcgtcatcgcc
agcacggtgactcccctgaagacttttttctggccagaggagcccatttggcctccacaa
ggggcaggaatgaacattctccaaagggcagcctccaaaaatgtctgctga

>gi568815582f:66479608_66688116|GENSCAN_predicted_peptide_3|244_aa
MSRSQSPGPGEAALGETLLGNIISYYQERAGEGRLDVCRQAALTHRARWLLGRRAPPWLC
LPEEVALALGGCCCGDPSPVPKVSPELVHALEFLELISVNLLLFPWRKEIRSLKMYTGSF
TYWVRSMLSRHKLDAILGRLGYTATLESEFSLVQAISKENVKQMVFKIFLDIFLRSLKGN
QLPGPALAPGPSSGEVVTASGCSRGQPLVSDAVPESRKVTILSQLCPTPGPQSPGQPLDR
KPEA

>gi568815582f:66479608_66688116|GENSCAN_predicted_CDS_3|735_bp
atgagcaggtcccaatccccaggcccaggcgaagctgctctgggtgagaccctcctgggc
aacatcatcagctactaccaggagagagcaggggagggccggctcgatgtctgcaggcaa
gcagccctcacccacagggccaggtggctcctgggcaggagggcccctccatggctctgt
ctgccagaggaagtggcccttgctctgggtggctgctgttgtggggatcccagccctgtc
ccaaaagtcagccctgagctggtgcatgcactagagttcctggagctgatctctgtcaac
ctgcttctgtttccctggaggaaggaaatcaggtccctaaagatgtacactgggagcttt
acctactgggtgcgatctatgctttccagacacaaactggacgccatcctgggcaggctg
ggctacacggccaccttggagtctgagttctcactggtccaggccatcagcaaagagaat
gtcaagcagatggtgttcaagatcttcctggacattttcctgagaagcctgaagggaaac
caactcccaggcccagccctggcccctggcccttcatcgggtgaggtggtcaccgcctca
gggtgcagcagggggcagcccctggtctcggatgcagttcctgagagcagaaaagtcacc
attctcagccagctctgcccgacaccaggtccccaatctccagggcagcccttagaccgg
aagccagaagcatag

>gi568815582f:66479608_66688116|GENSCAN_predicted_peptide_4|303_aa
MAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITLPD
FKLYYKATVTKTAWYWYQNRDIDQRNRAEPSEILPHIYNHLIFDKPDKNRKWGKDSLFNK
WCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKDF
MSKTPKAMATKAKIDKRDLIKLKSFCTAKETTIRVNRQPTEWEKIFAIYLSDKGLISRIY
NELKQIYKKKNKQPHQKVGKGYNRHFSKEDIYAAKRHMKKMLIITGHQRDANQNHNEIPS
HTS

>gi568815582f:66479608_66688116|GENSCAN_predicted_CDS_4|912_bp
atggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cacattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagaccaacggaacagagcagagccctcagaaatattgccgcatatctataaccat
ctgatctttgacaaacctgataaaaacaggaaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaattaattcaagatggattaaagacttaaatgttagacctaaaaccata
aaaacactagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaaccaaagccaaaattgacaaacgggatctcatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacagacaacctaca
gaatgggagaaaatttttgcaatctacttatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagaaaaaaaacaaacaaccccatcaaaaagtgggcaaa
ggatataatagacacttctcgaaagaagacatttatgcagccaaaagacacatgaaaaaa
atgctcatcatcactggccatcagagagatgcaaatcaaaaccacaatgagataccatct
cacaccagttag

>gi568815582f:66479608_66688116|GENSCAN_predicted_peptide_5|214_aa
MICVEGNIASGKTTCLEFFSNATDVEVLTEPVSKWRNVRGHNPLGLMYHDASRWGLTLQT
YVQLTMLDRHTRPQVSSVRLMERSIHSARYIFVENLYRSGKMPEVDYVVLSEWFDWILRN
MDVSVDLIVYLRTNPETCYQRLKKRCREEEKVIPLEYLEAIHHLHEEWLIKGSLFPMAAP
VLVIEADHHMERMLELFEQNRDRILTPENRKHCP

>gi568815582f:66479608_66688116|GENSCAN_predicted_CDS_5|645_bp
atgatctgtgtcgagggcaatattgcaagtgggaagacgacatgcctggaattcttctcc
aacgcgacagacgtcgaggtgttaacggagcctgtgtccaagtggagaaatgtccgtggc
cacaatcctctgggcctgatgtaccacgatgcctctcgctggggtcttacgctacagact
tatgtgcagctcaccatgctggacaggcatactcgtcctcaggtgtcatctgtacggttg
atggagaggtcgattcacagcgcaagatacatttttgtagaaaacctgtatagaagtggg
aagatgccagaagtggactatgtagttctgtcggaatggtttgactggatcttgaggaac
atggacgtgtctgttgatttgatagtttaccttcggaccaatcctgagacttgttaccag
aggttaaagaagagatgcagggaagaggagaaggtcattccgctggaatacctggaagca
attcaccatctccatgaggagtggctcatcaaaggcagccttttccccatggcagcccct
gttctggtgattgaggctgaccaccacatggagaggatgttagaactctttgaacaaaat
cgggatcgaatattaactccagagaatcggaagcattgcccatag

>gi568815582f:66479608_66688116|GENSCAN_predicted_peptide_6|143_aa
MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI
LLYVLRLDRLMKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVLSECKFTW
KTDVRIESYTIFILEIPRPIYNA

>gi568815582f:66479608_66688116|GENSCAN_predicted_CDS_6|432_bp
atggataacgtgcagccgaaaataaaacatcgccccttctgcttcagtgtgaaaggccac
gtgaagatgctgcggctggcactaactgtgacatctatgaccttttttatcatcgcacaa
gcccctgaaccatatattgttatcactggatttgaagtcaccgttatcttatttttcata
cttttatatgtactcagacttgatcgattaatgaagtggttattttggcctttgcttgat
attatcaactcactggtaacaacagtattcatgctcatcgtatctgtgttggcactgata
ccagaaaccacaacattgacagttggtggaggggttttatcagaatgcaaatttacttgg
aaaacagatgtaagaatagaaagctatactatattcatccttgagattcctaggccaata
tacaatgcctag

>gi568815582f:66479608_66688116|GENSCAN_predicted_peptide_7|535_aa
MDPEHAKPESSEAPSGNLKQPETAAALASSGSVVSSVPKAQRNISAKTAPRKHPAVSIRS
AQSAAAARPQGSEGTAPSRKATTRPPPKPTLPPPTPSAHTESKLLNEMAIKERVEGRAKV
PYKFRDSLKRFSFSPTGMLKILRLVSGELAGSTHKAGEGQETSYFAVGFSGNAQEVSQTK
DLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGPKCDHKIRAAAFIENTCFLSLPCVKVA
LYFPALGAAPAELRAVTRCSQPPDPAAERRLTDLGPPGDAGMGPRGQLRAEAAKGAKPEP
APAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKHEVGTRRGCRRYRW
ELKDSNKEFWLLGHAEIKIRSLGCLIAAMILLSSLTVHPILRLIITMEISFFSFFILLYS
FAIHRYIPFILWPISDLFNDLIACAFLVGAVVFAVRSRRSMNLHYLLAVILIGAAGVFAF
IDVCLQRNHFRGKKAKKHMLVPPPGKEKGPQQGKGPEPAKPPEPGKPPGPAKGKK

>gi568815582f:66479608_66688116|GENSCAN_predicted_CDS_7|1608_bp
atggatcctgaacacgccaaacctgagtcatccgaggcaccttcagggaacttgaaacaa
ccggagactgccgcagccctggcaagtagcggcagcgtagtgagttctgtacccaaggca
cagcgcaacatctcagcgaagaccgcaccccggaagcaccccgcagtctcaattcgcagt
gcgcagtccgcagccgccgcacgtccccaaggcagtgagggcaccgcaccctcaaggaaa
gccaccacacgcccacccccaaagcccacactcccaccccccacgccctctgcacacact
gaatccaaactcttaaatgagatggcgatcaaagagcgcgtggagggccgagccaaagtc
ccgtacaaattcagggacagcctcaaacgtttctccttctcgcccactggaatgttgaag
atcctgagactggtgagcggagagctggctgggtccacacataaagctggagagggccag
gagacatcatactttgctgtagggttcagtggtaatgcccaagaagtatcccagacaaag
gatcttaccaacagtatcattacagctgtgttcctttcagtagttgccatcttggccatg
caagaaaagaaaagaaggcatttactctatgtcggggggcctaaatgtgaccataaaatt
agggctgctgcttttatcgagaacacctgcttcctctcgttgccttgtgtgaaagtcgcg
ttgtattttcctgcgcttggcgctgcgcccgcggagctcagggccgtgacccggtgctcg
cagccccccgaccccgcagcggagcggcggcttacagacctggggccacctggagacgcc
gggatgggaccgcgagggcagctccgcgcggaggcggcaaagggggccaagccagagcca
gcaccagctccacctccacccggggccaaacccgaggaagacaagaaggacggtaaggag
ccatcggacaaacctcaaaaggcggtgcaggaccataaggagccatcggacaaacctcaa
aaggcggtgcagcccaagcacgaagtgggcacgaggagggggtgtcgccgctaccggtgg
gaattaaaagacagcaataaagagttctggctcttggggcacgctgagatcaagattcgg
agtttgggctgcctaatagctgcaatgatactgttgtcctcactcaccgtgcaccccatc
ttgaggcttatcatcaccatggagatatccttcttcagcttcttcatcttactgtacagc
tttgccattcatagatacatacccttcatcctgtggcccatttctgacctcttcaacgac
ctgattgcttgtgcgttccttgtgggagccgtggtctttgctgtgagaagtcggcgatcc
atgaatctccactacttacttgctgtgatccttattggtgcggctggagtttttgctttt
atcgatgtgtgtcttcaaagaaaccacttcagaggcaagaaggccaaaaagcatatgctg
gttcctcctccaggaaaggaaaaaggaccccagcagggcaagggaccagaacccgccaag
ccaccagaacctggcaagccaccagggccagcaaagggaaagaaatga

>gi568815582f:66479608_66688116|GENSCAN_predicted_peptide_8|235_aa
MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV
ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA
IAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEGLQPFNV
SAKNQHKETKQSLVCIWAADLAVCGPHQPTKLLGLDVGADKIRQTWKKPWILQLH

>gi568815582f:66479608_66688116|GENSCAN_predicted_CDS_8|708_bp
atgtggcccccagaccccgaccccgacccggaccccgagcctgccggcggctcccgtccc
ggccccgcggtccccgggctccgcgccctgctgccggcgcgggctttcctctgctctctc
aaaggccgcctcctgctggccgagtcgggtctctcattcatcacttttatctgctatgtg
gcgtcctcagcatctgccttcctcacagcgcctctgctggagttcctgctggccttgtac
ttcctctttgctgatgccatgcagctgaatgacaagtggcagggcttgtgctggcccatg
atggacttcctgcgctgtgtcaccgcggccctcatctactttgctatctccatcacggcc
atcgccaagtactcggatggggcttccaaagccgctggggtgtttggcttctttgctacc
atcgtgtttgcaactgatttctacctgatctttaacgacgtggccaaattcctcaaacaa
ggggactctgcagatgagaccacagcccacaagacagaaggccttcagccctttaacgtc
tctgccaaaaaccagcacaaggagacaaagcagagccttgtctgtatctgggcagcagac
ctggccgtgtgtggacctcaccagcctaccaagctgttgggcctggacgtgggtgctgat
aaaataagacaaacctggaaaaaaccctggattctgcaacttcactag

>gi568815582f:66479608_66688116|GENSCAN_predicted_peptide_9|154_aa
CVALVEVVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIP
QINWNLTDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQK
WRVSVRQQSTNDYIRARTESRDVDSRPEIQRLDT

>gi568815582f:66479608_66688116|GENSCAN_predicted_CDS_9|465_bp
tgtgtggcgctggtggaggtggtgatcttggccctgattgcattcatctgcatagagacc
atcatggcatgctccccgtgtgaaggcctctacttttttgagtttgtgagctgcagtgcg
tttgtggtgactggcgtcttgctgattatgttcagtctcaacctgcacatgaggatcccc
cagatcaactggaatctgacagatttggtcaacactggactcagcgctttccttttcttt
attgcttcaatcgtactggctgctttaaaccatagagccggagcagaaattgctgccgtg
atatttggcttcttggcgactgcggcatatgcagtgaacacattcctggcagtgcagaaa
tggagagtcagcgtccgccagcagagcaccaatgactacatccgagcccgcacggagtcc
agggatgtggacagtcgccctgagatccagcgcctggacacgtga