GENSCAN 1.0	Date run:  5-Nov-116	Time: 10:35:32

Sequence gi568815597r:7913213_8115619 : 202407 bp : 43.98% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  12640  12679   40                              -0.16
 1.01 Sngl +  40706  41044  339  1  0   59   41   152 0.546   3.63
 1.02 PlyA +  41584  41589    6                               1.05

 2.00 Prom +  47744  47783   40                              -3.06
 2.01 Init +  49574  49663   90  1  0   72   98   117 0.975  11.62
 2.02 Intr +  52112  52213  102  1  0   74   68    74 0.925   4.37
 2.03 Intr +  57682  57751   70  0  1   61   66   107 0.932   4.55
 2.04 Intr +  64440  64526   87  1  0   66  107    59 0.900   5.54
 2.05 Intr +  71682  71812  131  1  2  120   11   161 0.066  12.01
 2.06 Intr +  72745  72816   72  0  0   17   99    69 0.052   0.50
 2.07 Intr +  76856  77509  654  1  0  -77   19  1633 0.819 131.97
 2.08 Term +  90171  90293  123  2  0   75   50    70 0.294   0.28
 2.09 PlyA +  93497  93502    6                               1.05

 3.04 PlyA -  94125  94120    6                               1.05
 3.03 Term - 101184  99998 1187  1  2   95   41   496 0.844  37.52
 3.02 Intr - 102172 102096   77  0  2   88   76    13 0.609  -0.74
 3.01 Init - 102332 102283   50  2  2   95  106    21 0.536   5.02
 3.00 Prom - 104481 104442   40                              -8.26

 4.00 Prom + 104792 104831   40                              -0.16
 4.01 Init + 113913 113949   37  2  1   84   89    37 0.323   3.67
 4.02 Term + 114210 114331  122  1  2   86   44    95 0.328   3.54
 4.03 PlyA + 114361 114366    6                               1.05

 5.02 PlyA - 115485 115480    6                               1.05
 5.01 Sngl - 144300 144028  273  0  0   65   36   250 0.944  12.83
 5.00 Prom - 159407 159368   40                              -4.36

 6.00 Prom + 180338 180377   40                              -0.76
 6.01 Init + 181197 181249   53  2  2   82   91    35 0.370   2.35
 6.02 Term + 196789 197035  247  1  1    0   38   232 0.789   4.66
 6.03 PlyA + 198130 198135    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  71682  71842  161  1  2  120   43   183 0.892  15.10


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:7913213_8115619|GENSCAN_predicted_peptide_1|112_aa
MGTGKSSSFFAEPAGCGHQNESGPSRCQGLDLPPCIRQAAHTPRKSARSLRQSDSRAQRP
TRDALKEVTFRGCYSQTRPSSTRRIYVGSDPCKHRRDRASGWEHATVPPTAT

>gi568815597r:7913213_8115619|GENSCAN_predicted_CDS_1|339_bp
atgggaacaggcaaatcgtcgtcgttctttgctgagcctgcgggctgcggtcaccagaac
gaatctgggcccagcaggtgccaagggctcgacctcccgccttgcatccggcaggccgca
cacacccctcggaagtcggcgagatcgctgaggcaaagcgactccagggcgcagagaccc
acacgcgacgctctaaaggaagtgacctttaggggctgttactctcagaccaggcccagc
agcacccggcgcatttacgtcggatctgacccctgcaagcaccggcgcgaccgcgctagc
ggctgggaacacgcgacggtcccgcccactgcgacctga

>gi568815597r:7913213_8115619|GENSCAN_predicted_peptide_2|442_aa
MASKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLED
AKKESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGSKVTTHPLAKDKMMNGGHYT
YSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQFLLGGHMIQTQPIRALFTTG
RVTQNVNAGFTTITITTTTITITISIIINIPTVVTTTTITITIITITITIITITTTVITI
TLTTLTITLTTITTLTTTTITTIITTSITLTTITITTTITFTTTTTITTSITLTITLTTT
ITTLTTTITITTSITLTTTITITTTITFTTTTITTSITFTITLTTTITTTNTITLTTTII
TITTTITITLTTTITISITTTTTTVTIIITTIIIFFTSCSLQEKDLPTSGFVTRKGIENI
SSKSGYQILEGNLSDLESVMEK

>gi568815597r:7913213_8115619|GENSCAN_predicted_CDS_2|1329_bp
atggcttccaaaagagctctggtcatcctggctaaaggagcagaggaaatggagacggtc
atccctgtagatgtcatgaggcgagctgggattaaggtcaccgttgcaggcctggctgga
aaagacccagtacagtgtagccgtgatgtggtcatttgtcctgatgccagccttgaagat
gcaaaaaaagagtctgctgctgtgaaggagatactgaaggagcaggaaaaccggaagggc
ctgatagccgccatctgtgcaggtcctactgctctgttggctcatgaaataggttttgga
agtaaagttacaacacaccctcttgctaaagacaaaatgatgaatggaggtcattacacc
tactctgagaatcgtgtggaaaaagacggcctgattcttacaagccgggggcctgggacc
agcttcgagtttgcgcttgcaattgttgaagccctgaatggcaaggaggtggcggctcaa
ttcctcctgggcgggcacatgatccagacccagccaatccgagccctgtttaccactggc
cgtgtgacccagaatgtgaatgctggattcaccaccatcaccatcaccaccaccacaatc
actatcaccatctccatcatcatcaacatccccactgttgtcaccaccaccaccatcact
atcaccatcattaccatcaccatcaccatcatcaccatcactaccaccgtcatcaccatc
accctcaccaccctcaccatcaccctcaccactatcaccacactcaccaccaccaccatc
accaccatcattaccaccagcatcaccctcaccaccatcaccatcaccaccaccatcacc
ttcaccaccaccaccaccatcaccaccagcatcaccctcaccatcaccctcaccaccacc
atcaccacactcaccaccaccatcaccatcaccaccagcatcaccctcaccaccaccatc
accatcaccaccaccatcaccttcaccaccaccaccatcaccaccagcatcaccttcacc
atcaccctcaccaccaccatcaccactaccaacaccatcaccctcaccactaccatcatc
accatcaccaccaccatcaccatcaccctcaccaccaccatcaccatcagcatcaccacc
accaccaccaccgtcaccatcattatcaccaccatcatcatctttttcacttcttgcagc
ttgcaggaaaaagacctgccaacatcaggatttgtaaccagaaaaggcattgaaaacata
tcctcaaaatcaggctatcaaattttagaaggaaacctttcagacctagaatcagttatg
gagaagtga

>gi568815597r:7913213_8115619|GENSCAN_predicted_peptide_3|437_aa
MGNMRKTYWSSRSEFKNNFLNIDPITMAYSLNSSAQERLIPLGHASKSAPMNGHCFAENG
PSQKSSLPPLLIPPSENLGPHEEDQVVCGFKKLTVNGVCASTPPLTPIKNSPSLFPCAPL
CERGSRPLPPLPISEALSLDDTDCEVEFLTSSDTDFLLEDSTLSDFKYDVPGRRSFRGCG
QINYAYFDTPAVSAADLSYVSDQNGGVPDPNPPPPQTHRRLRRSHSGPAGSFNKPAIRIS
NCCIHRASPNSDEDKPEVPPRVPIPPRPVKPDYRRWSAEVTSSTYSDEDRPPKVPPREPL
SPSNSRTPSPKSLPSYLNGVMPPTQSFAPDPKYVSSKALQRQNSEGSASKVPCILPIIEN
GKKVSSTHYYLLPERPPYLDKYEKFFREAEETNGGAQIQPLPADCGISSATEKPDSKTKM
DLGGHVKRKHLSYVVSP

>gi568815597r:7913213_8115619|GENSCAN_predicted_CDS_3|1314_bp
atggggaatatgaggaagacctactggagcagtcgcagtgagtttaaaaacaacttttta
aatattgacccgataaccatggcctacagtctgaactcttctgctcaggagcgcctaata
ccacttgggcatgcttccaaatctgctccgatgaatggccactgctttgcagaaaatggt
ccatctcaaaagtccagcttgccccctcttcttattcccccaagtgaaaacttgggacca
catgaagaggatcaagttgtatgtggttttaagaaactcacagtgaatggggtttgtgct
tccacccctccactgacacccataaaaaactccccttcccttttcccctgtgcccctctt
tgtgaacggggttctaggcctcttccaccgttgccaatctctgaagccctctctctggat
gacacagactgtgaggtggaattcctaactagctcagatacagacttccttttagaagac
tctacactttctgatttcaaatatgatgttcctggcaggcgaagcttccgtgggtgtgga
caaatcaactatgcatattttgataccccagctgtttctgcagcagatctcagctatgtg
tctgaccaaaatggaggtgtcccagatccaaatcctcctccacctcagacccaccgaaga
ttaagaaggtctcattcgggaccagctggctcctttaacaagccagccataaggatatcc
aactgttgtatacacagagcttctcctaactccgatgaagacaaacctgaggttcccccc
agagttcccatacctcctagaccagtaaagccagattatagaagatggtcagcagaagtt
acttcgagcacctatagtgatgaagacaggcctcccaaagtaccgccaagagaacctttg
tcaccgagtaactcgcgcacaccgagtcccaaaagccttccgtcttacctcaatggggtc
atgcccccgacacagagctttgcccctgatcccaagtatgtcagcagcaaagcactgcaa
agacagaacagcgaaggatctgccagtaaggttccttgcattctgcccattattgaaaat
gggaagaaggttagttcaacacattattacctactacctgaacgaccaccatacctggac
aaatatgaaaaattttttagggaagcagaagaaacaaatggaggcgcccaaatccagcca
ttacctgctgactgcggtatatcttcagccacagaaaagccagactcaaaaacaaaaatg
gatctgggtggccacgtgaagcgtaaacatttatcctatgtggtttctccttag

>gi568815597r:7913213_8115619|GENSCAN_predicted_peptide_4|52_aa
MKDVKGQCGTVDGLCLLRRPELAPTSFGFGEATDAQGQSPSGPVGGGFSGRQ

>gi568815597r:7913213_8115619|GENSCAN_predicted_CDS_4|159_bp
atgaaggatgtcaagggacagtgtgggacagtggacggtttgtgtttactcaggcgacct
gagctggccccgacgtcttttggctttggagaggccacggatgcccaaggacaaagcccc
agcgggcctgtgggaggaggtttctcggggcgccagtga

>gi568815597r:7913213_8115619|GENSCAN_predicted_peptide_5|90_aa
MGVPYCTIKGKARLGRLVYRKTCTTVAFAWVNSEDKGALAKLVEAIRTNYKDRHDEICCH
WGGNVLASKSMARITNLKKAKAKELATKLD

>gi568815597r:7913213_8115619|GENSCAN_predicted_CDS_5|273_bp
atgggggtcccttactgcactatcaaggggaaggcaagactgggacgtctagtctacagg
aagacctgcaccactgttgccttcgcatgggttaactcggaagacaaaggagctttggct
aagctggtggaagctatcaggaccaattacaaagacagacacgacgagatctgctgtcac
tggggaggcaatgtcctggcttccaagtctatggcccgcattaccaatctcaaaaaggca
aaggctaaagaacttgccaccaagctggattaa

>gi568815597r:7913213_8115619|GENSCAN_predicted_peptide_6|99_aa
MVETNWSLLPVAYLELFSIKAKGEAASADGEAAAGYPEDPAKILDKGGSTEQQIFSVDET
AFYRKTMSSRIFIDREEKSIPGFKASKDRPTLVRSEYSC

>gi568815597r:7913213_8115619|GENSCAN_predicted_CDS_6|300_bp
atggtggagaccaactggtccctcctgccagttgcgtatcttgaactcttcagcataaaa
gccaaaggtgaggcagcaagtgctgatggggaagctgccgcaggttatccagaagatcca
gctaagatccttgataaaggtggctccactgaacaacagattttcagtgtagatgaaaca
gccttctatcggaagacgatgtcatccaggattttcatagacagagaggagaagtcgata
cctggcttcaaagcttcaaaggacaggccaactcttgttaggagcgaatacagctgttga