GENSCAN 1.0	Date run:  8-Nov-116	Time: 06:02:30

Sequence gi568815583f:66195098_66433309 : 238212 bp : 45.00% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7512   7698  187  1  1   95  111    74 0.596   9.15
 1.02 Intr +   8441   8597  157  2  1   75   77     9 0.041  -1.49
 1.03 Intr +  15735  15863  129  2  0   76   23   166 0.887   9.79
 1.04 Intr +  17876  18011  136  1  1   49   93   102 0.911   6.94
 1.05 Intr +  36683  36711   29  0  2   93   71    36 0.044   0.23
 1.06 Term +  40714  40782   69  0  0  126   48    60 0.171   3.74
 1.07 PlyA +  42715  42720    6                               1.05

 2.00 Prom +  43966  44005   40                              -5.76
 2.01 Init +  57369  57466   98  2  2   89   57   141 0.941  11.04
 2.02 Intr +  57955  58078  124  1  1   40   73   104 0.971   4.69
 2.03 Intr +  60002  60187  186  1  0   78   33   130 0.803   6.39
 2.04 Term +  75975  76103  129  2  0  -29   29   379 0.999  18.48
 2.05 PlyA +  76323  76328    6                               1.05

 3.03 PlyA -  76733  76728    6                               1.05
 3.02 Term -  83946  83822  125  1  2   63   55   103 0.858   3.05
 3.01 Init -  85036  84979   58  1  1   78   60    34 0.509   1.07
 3.00 Prom -  87999  87960   40                              -2.36

 4.00 Prom +  97835  97874   40                              -5.96
 4.01 Init +  98500  98638  139  0  1  103   49   245 0.974  22.40
 4.02 Intr +  99891 100044  154  1  1   85   59    44 0.888   0.33
 4.03 Intr + 111727 111855  129  1  0   79   80    74 0.962   5.51
 4.04 Intr + 113612 113747  136  2  1   90   63   116 0.961   9.87
 4.05 Intr + 116627 116803  177  1  0   59   94   104 0.917   8.22
 4.06 Intr + 118942 119020   79  0  1   39   31    71 0.569  -4.38
 4.07 Intr + 119939 120118  180  0  0   52   99   213 0.835  18.64
 4.08 Intr + 123352 123521  170  2  2   77   68    70 0.954   3.57
 4.09 Intr + 125474 125635  162  1  0  109   71    93 0.995   9.87
 4.10 Intr + 127590 127837  248  2  2   75   90   228 0.984  17.96
 4.11 Intr + 130734 131267  534  0  0   64   18   573 0.967  39.94
 4.12 Intr + 133873 134027  155  1  2  100   20   186 0.766  12.72
 4.13 Intr + 134124 134302  179  1  2   71   71    89 0.915   5.14
 4.14 Intr + 136778 136923  146  1  2   78   95    65 0.497   5.28
 4.15 Term + 137954 138215  262  2  1   29   54   136 0.450  -0.70
 4.16 PlyA + 138684 138689    6                               1.05

 5.06 PlyA - 138836 138831    6                               1.05
 5.05 Term - 142084 141861  224  2  2   62   38   181 0.975   7.58
 5.04 Intr - 146259 146053  207  1  0   85   54    60 0.642   1.35
 5.03 Intr - 154026 153963   64  0  1   84   95    29 0.964   1.49
 5.02 Intr - 154340 154218  123  2  0   82  111    41 0.821   6.58
 5.01 Init - 157744 157718   27  1  0   89   95    34 0.562   3.66
 5.00 Prom - 158552 158513   40                              -4.16

 6.08 PlyA - 159803 159798    6                               1.05
 6.07 Term - 184778 184315  464  0  2   58   41   436 0.821  31.12
 6.06 Intr - 190259 190161   99  0  0   -2  110    73 0.519   0.58
 6.05 Intr - 191715 191553  163  0  1  104   77    91 0.570   9.15
 6.04 Intr - 192323 192121  203  0  2   83   61    48 0.196   0.60
 6.03 Intr - 195454 195404   51  2  0   71   99    20 0.138   0.28
 6.02 Intr - 199252 199189   64  1  1   40   97    54 0.146  -0.21
 6.01 Init - 237010 236831  180  1  0  100   94   105 0.500  11.52

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  90606  90704   99  2  0   28   38   156 0.973   2.73


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:66195098_66433309|GENSCAN_predicted_peptide_1|235_aa
XSLSNSSLIPNCPTNTECRGSPSLSGNFLRASGWISFRTGQFLSGLPVRTLLPSPEALAP
TGSLPAYKKDRIPRRTLTRGPQRETESESPSFDPLSTFAPFYPLHQNQPKQNSSKVIPSN
EYRQGHWFQEELDLSPQDKGKKQVTDGKKKLVVKDEFRASSPVDLRGRAKKLFGDIGKLW
TKDGQKGEAAGDEACKSLHWGSAVVTTWVMEEQVKESHRQASSLHIKDKDYPGSV

>gi568815583f:66195098_66433309|GENSCAN_predicted_CDS_1|708_bp
ntatctctgagcaacagctccctgatccccaactgtccaaccaatacagaatgtcgagga
agtccttccctttctggaaacttccttcgggcctctggctggatttccttcaggactggt
cagtttctttcaggactgccagtcaggactctgctcccctctccagaagctctggcgccc
acaggcagcttacctgcttacaagaaagacaggatcccaaggagaactctgaccagaggt
ccccagagagaaactgagtcagagagtcccagctttgaccccctaagcacctttgctcct
ttctaccctctccaccaaaatcagccaaaacaaaactcttcaaaggtaattcccagcaat
gaatatcgccagggccactggttccaggaagagctggacttgagccctcaggacaagggg
aagaagcaagtcacagatggcaagaaaaaactagtagtcaaggatgaatttagagcttcc
agtcctgtagatctgcgagggagggccaagaagctgtttggtgatatcgggaaattgtgg
acaaaggacgggcagaaaggagaggccgcaggagatgaggcctgcaaatccctgcactgg
ggaagtgctgtagtgacgacttgggtcatggaagagcaagtcaaggagagccacaggcaa
gcatcaagtctccatatcaaggacaaggactatcccggttcagtgtga

>gi568815583f:66195098_66433309|GENSCAN_predicted_peptide_2|178_aa
MTTRETVTLASQRGLRGTDPETRLPLDGARESSKSVHGTCWGLAAAGRIAGRRRKPAASP
QALPPDPGGEGAGAPSGVGREERRGVSVPMESTLRPDTTRILIVPPLISGARNFCGTQPE
AETEVQPEAEPLLSPWEEEEEEEEDEKEEEEEEEEEEEEEEEEEEEEEEEEEENSALA

>gi568815583f:66195098_66433309|GENSCAN_predicted_CDS_2|537_bp
atgaccactcgggagacagtcacactggcctcgcagcgcgggctgcggggcaccgatccc
gagacgcggctgccgctggatggagcccgcgagtccagcaaaagcgtgcatggcacttgc
tggggcttagcggccgcggggcgcatcgccggccgccgccgaaaacctgctgcgtccccg
caggctctgcctcccgaccccggcggggaaggcgccggtgcacccagtggagtcgggcgg
gaggagagacgtggggtctccgttcccatggagtccacgctgcggcccgacaccaccagg
attctcatagttccacccctaatttctggggccagaaatttctgtggtacacaaccagaa
gcagaaacagaagtacaaccagaagcagaacctctgctcagcccctgggaagaagaagaa
gaagaggaggaggacgagaaggaggaagaggaagaggaagaagaagaagaagaggaagag
gaagaagaagaagaagaggaagaagaagaggaagaagaaaattcagcattagcttag

>gi568815583f:66195098_66433309|GENSCAN_predicted_peptide_3|60_aa
MESVASMGAKAFWKSVKNVQTAVIQFQSHFLNCRLVVSTCMCSSLYSCPKDSTPVPDRIY

>gi568815583f:66195098_66433309|GENSCAN_predicted_CDS_3|183_bp
atggagagtgttgcctcaatgggggctaaagccttttggaagtcagtgaagaatgttcag
acagcagtgatccagttccagtcccacttcctcaactgccggctggtggtttccacctgc
atgtgctcatctctttactcatgccctaaggactcaacaccagtgcctgataggatctac
tga

>gi568815583f:66195098_66433309|GENSCAN_predicted_peptide_4|949_aa
MLQKREKVLLLRTFQGRTLRIVREHYLRPCVPCHSPLCPQPAACSHDGKLLSSDVTHYVI
PDWKVVQDYLEILEFPELKGIIFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANE
FQQCCYLPRERGESMEKWQTRSIYNAAVWYYHHCQDRMPIVMVTEDEEAIQQYGSETEGV
FVITFKNYLDNFWPDLKAAHELCDSILQSRRERENESQESHGKEYPEHLPLEVLEAGIKS
GRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVSDILIHGMKARNRSIHGDVVVVELLP
KNEWKGRTVALCENDCDDKASGESPSEPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGK
NAQKILVTPWDYRIPKIRISTQQAETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL
EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK
GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRYAVSIMWELDKASYE
IKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLEELVWAIGK
LTDIARHVRAKRDGCGALELEGVEVCVQLDDKKNIHDLIPKQPLEVHETVAECMILANHW
VAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNANDPHD
PIVNRLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLL
MAAISKDKKMEIKGNLFSNKDLEELCRHINNRNQAAQHSQKQSTELFQCMYFKDKDPATE
ERCISDGVIYSIRTNGVLLFIPRLEIISNKPYKIPNTELIHQSSPLLKSELVKEVTKSVE
EAQLAQEVKVNIIQEEYQEYRQTKGRSLYTLLEEIRDLALLDVSNNYGI

>gi568815583f:66195098_66433309|GENSCAN_predicted_CDS_4|2850_bp
atgctgcagaagcgggagaaggtgctgctgctgaggaccttccagggccgcacgctgcgg
atcgtgcgcgagcactacctgcggccctgcgtgccctgccacagcccgctctgcccgcag
cccgccgcctgcagccacgatgggaaactcttgtctagtgatgtgactcattacgtgatc
ccagactggaaagttgttcaagattatcttgagatccttgagtttcctgagttgaaggga
attattttcatgcagacagcttgtcaagctgtgcagcatcaaagaggcaggagacagtat
aacaaactgcgaaacctgctgaaggatgcgcgtcatgattgcattctctttgctaatgaa
ttccagcaatgctgctatctgccacgggaaagaggagagtccatggagaagtggcagacc
aggagcatatacaacgcagctgtttggtactatcatcactgccaggacaggatgccaatt
gttatggtgacagaagatgaagaggcaattcagcagtatggaagtgaaacagaaggagta
ttcgtgattactttcaagaattacctggacaatttctggcctgatttaaaagctgcccac
gagctttgtgattctatccttcagtctcgacgggagagagagaatgagagtcaggagagc
catgggaaggagtacccagaacatcttcccctggaagtgttagaagctgggattaaatct
ggacgctatatccagggaattctgaatgtcaacaaacacagagcccaaatagaagctttt
gttcgacttcaaggagccagcagtaaagattcagatttagtcagtgacatcctaatccac
gggatgaaggctcgaaaccgctcaattcatggagatgtggtagttgtggagctgcttcct
aaaaatgaatggaaaggaagaaccgtagccctgtgtgagaatgactgtgacgacaaggct
tcgggcgagtccccaagtgagcccatgcctacaggtcgagtggtgggcatacttcagaag
aactggcgggattatgtggtgacatttccgtccaaagaagaggtccaatctcagggcaaa
aatgctcagaaaatcctggttacaccttgggattacagaattcccaaaattcgaattagc
actcagcaagcagaaaccctccaggacttcagggtggtcgtgcgcatcgattcctgggag
tcaacatctgtgtatccaaatggacattttgtgcgtgttttaggaagaatcggagatctg
gaaggggaaattgcaaccatcctggtggaaaacagtatttcagttattcctttctcagaa
gctcagatgtgtgagatgccagtaaacacaccagaaagtccctggaaggtgagtcctgaa
gaggaacaaaaacgtaaagacttgaggaaaagccatctcgtattcagcattgaccccaaa
ggttgtgaagatgtggatgacacactctcagtcagaaccttaaataatggcaacctggaa
cttggggtccacatcgcagatgtaacacactttgtggcaccaaattcttacattgatatt
gaagctagaacaaggtatgctgtaagcatcatgtgggaactggataaagcctcttatgaa
attaagaaagtgtggtatggcagaaccattattcgatcagcatacaaactgttctatgaa
gcagcccaagaactactggatggaaacttaagcgttgttgatgatattccagaattcaaa
gacttggatgagaagagcagacaagccaagctggaggagttggtgtgggcaattggaaag
ctgaccgacatagctcgccatgtcagagctaaacgagacggatgtggtgccctggaactg
gaaggggtagaggtttgcgtacagctagatgacaaaaagaacattcacgacctcatcccc
aagcagcccctggaagtccacgagacagtggctgaatgcatgatcctggccaaccactgg
gtcgccaaaaagatctgggagagcttccctcatcaggccttgctgcgccagcaccctcct
ccacaccaggagttcttttcagaactccgggaatgtgctaaagccaaaggcttcttcata
gatacacggtccaataaaacactggctgattctctggataatgcgaacgacccccacgat
cccattgtgaacaggctactgcgctccatggccacgcaggccatgtcgaatgctctgtac
ttctccaccggatcctgtgcggaggaggagttccatcattacggtcttgcattagataaa
tatacccactttacttctccaataagaagatattcagatattgtagtacaccgcttgtta
atggcagccatttcaaaagataagaaaatggaaattaagggaaatctgttcagcaacaaa
gatcttgaggaattatgcagacatatcaacaacagaaaccaagcagcacagcattctcag
aagcagtctactgagctcttccagtgcatgtacttcaaagacaaagaccctgccaccgag
gagcgttgcatatctgacggagttatttattcaattagaacaaatggtgtgcttctattt
ataccaagacttgaaataattagtaacaaaccatacaagataccaaatacagaacttatt
catcagagttcccccttgctgaagagtgagttagtgaaagaagtaactaaatctgtggaa
gaagctcagcttgcccaagaagtcaaagtaaacatcattcaggaggaatatcaagaatat
cgccaaacaaagggaaggagcctatacacacttctagaggagatacgggacctagctctc
ctggatgtttcaaacaattatggaatatga

>gi568815583f:66195098_66433309|GENSCAN_predicted_peptide_5|214_aa
MVKELSLMKAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIRLDL
PILHEDFVSNNDEVAENNEHDVTSTELDPFLTNLSESEMFASELSRSLTEEQQQRIERNK
QLALERRQAKLLSNSQTLGNDMLMNTPRAHTVEEVNTDEDQKEESNGLNEDILDNPCNDA
IANTLNEEETLLDQSFKNVQQQLDATSRNITEAR

>gi568815583f:66195098_66433309|GENSCAN_predicted_CDS_5|645_bp
atggtgaaggaactgagcctgatgaaggctgaagacttgaagatgctaatcagacacatg
gagcactgggcacataggctattccctaaactgcagtttgaggattttattgacagagtt
gaatacctgggaagtaaaaaggaagttcagacctgtttaaaacgaattcgacttgatctc
cctattttacatgaagattttgttagcaataatgatgaagttgcggagaataatgaacat
gatgtcacttctactgaattagatccctttctgacaaacttatctgaaagtgagatgttt
gcttctgagttaagtagaagcctaacagaagagcaacaacaaagaattgagagaaataaa
caactggccttggaaagaaggcaggcaaagctgctgagtaatagtcagaccctaggaaat
gatatgttaatgaatacacccagggcacacacggttgaagaggttaatactgatgaggat
caaaaggaggagtcaaatggattaaacgaagacattctggacaatccatgtaatgatgct
attgccaatactttaaatgaagaggaaacactgctggaccagtcttttaaaaatgtgcaa
cagcaacttgatgctacatccagaaatattactgaagctagataa

>gi568815583f:66195098_66433309|GENSCAN_predicted_peptide_6|407_aa
MDKSLNLATFQISPLYIMEYYADIKRNEITSFAGTWVELEVIILSKLTQVYKTKYRMFSL
MCVPYKPGRTADAMNYTLNAISPVLPNSISELGKGYVRELVPLTAEPSGAGFSWMGVGFF
LGILDPGNALPTPGGGQHLSLPPAALPRARCAGPSPGRGPRGCLQRTTNGGKPRRQMTRK
YVTGARRTAWGRGPSRTPWRPLSPRGKQVDPAEKKSVSLCVSKTLGVQNKGNVYRTKETS
TPGYPQPGVGDLAENVNITLKGHTVIVNGPRGTLRRDFNHINVELSLLGKKKKEALVDKW
WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAYFPIIVVIPENGSVVEIRNFLGE
KYIRRVRMRPGVACSVSQAQKDELIFEGNDIELVSNSAALIQQATTV

>gi568815583f:66195098_66433309|GENSCAN_predicted_CDS_6|1224_bp
atggacaagtcacttaaccttgccacatttcagatttctcctctatatatcatggaatac
tatgcagacataaaaaggaacgagatcacgtcctttgcgggaacatgggtggagctggag
gtcattattctcagcaaactaacgcaggtatacaaaaccaaataccgcatgttctcacta
atgtgtgttccttacaaacctggcagaactgctgatgctatgaactacaccctgaatgca
ataagtcccgtattacccaactccatctctgaactgggtaagggctatgttagagagctg
gtcccgttaactgcagagccgtcgggggccgggttcagctggatgggcgtcggcttcttc
ttgggcattttggacccgggtaacgcgcttccaactccggggggagggcagcacctctcg
cttcctcccgctgcgctgccccgcgcccgctgcgcaggaccaagtccgggccgcgggccc
cggggctgccttcagcggacaaccaatgggggcaagcctcggcggcagatgacgcggaaa
tacgtcacgggagcgcggcgcactgcctgggggcggggtccgtcgcggacgccgtggcgc
cctctgtcgccccgaggcaagcaggtggacccagctgagaagaagtctgtgtcgctgtgt
gtgtcaaagacattaggtgtacagaacaaaggaaacgtgtacagaacaaaggaaacatct
acacctggttatccacagccaggtgttggtgacctagcagaaaatgtcaacattactctg
aagggacacacagttatcgtgaatggccccagaggaaccctgcggagggacttcaatcac
atcaatgtagaactcagtcttcttggaaagaaaaaaaaagaggctctggttgacaaatgg
tggggtaacagaaaagaactggctaccgttcggactatttgtagtcatgtacagaacatg
atcaagggtgttacactgggcttccgttacaagatgaggtctgtgtatgcttacttcccc
atcatcgtcgttatcccggagaatgggtctgttgttgaaatccgaaatttcttgggtgaa
aaatacatccgcagggtgcggatgagaccaggtgttgcttgttcagtatctcaagcccag
aaagatgaattaatctttgaaggaaatgacattgagcttgtttcaaattcagcggctttg
attcagcaagccacaacagtttaa