GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:53:16

Sequence gi568815588f:102544618_102757351 : 212734 bp : 48.57% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5353   5489  137  1  2  112   91    74 0.843  10.31
 1.02 Intr +  47965  48107  143  2  2   92   94   108 0.970  11.87
 1.03 Intr +  49019  49104   86  1  2   40   73   139 0.997   6.22
 1.04 Intr +  49376  49448   73  2  1  118   55    35 0.907   2.61
 1.05 Intr +  52523  52676  154  1  1   44   81   278 0.855  22.35
 1.06 Intr +  54816  54927  112  1  1   46  105   138 0.936  10.74
 1.07 Intr +  70651  70785  135  1  0   85  105   189 0.995  19.98
 1.08 Intr +  72673  72811  139  1  1   97   52    98 0.940   7.57
 1.09 Intr +  74170  74257   88  0  1   64   94     7 0.395  -1.56
 1.10 Intr +  81359  81460  102  0  0   97   80    18 0.696   2.05
 1.11 Intr +  82558  82626   69  2  0  112   74    15 0.701   1.65
 1.12 Intr +  82865  83040  176  0  2   93   56    93 0.907   6.26
 1.13 Term +  85449  85538   90  2  0   92   38   120 0.886   5.12
 1.14 PlyA +  85628  85633    6                               1.05

 2.00 Prom +  88188  88227   40                              -0.06
 2.01 Init +  89117  89216  100  1  1   81   94    39 0.210   2.26
 2.02 Intr +  99342  99526  185  1  2   79   64    -9 0.140  -4.69
 2.03 Intr +  99779 100574  796  1  1   48   19  1295 0.714 109.64
 2.04 Intr + 104550 104661  112  1  1  -15   58   122 0.042  -1.66
 2.05 Intr + 106248 106323   76  0  1  112   68   -25 0.066  -2.58
 2.06 Intr + 110036 110188  153  1  0   80   92   234 0.227  23.27
 2.07 Intr + 110463 110696  234  2  0  106   86   555 0.999  54.99
 2.08 Intr + 111489 111520   32  2  2  136  115    48 0.999   9.23
 2.09 Intr + 111653 111768  116  2  2   77  100   195 0.974  19.69
 2.10 Term + 112130 112737  608  0  2   79   42   533 0.999  42.48
 2.11 PlyA + 113462 113467    6                               1.05

 3.14 PlyA - 113638 113633    6                               1.05
 3.13 Term - 120890 120822   69  2  0  135   50    12 0.245   0.04
 3.12 Intr - 124217 124192   26  0  2   72   96    30 0.217  -0.06
 3.11 Intr - 125427 125355   73  0  1  111   34    44 0.106   0.28
 3.10 Intr - 131579 131524   56  0  2   75   73    39 0.150  -0.20
 3.09 Intr - 132981 132824  158  2  2   75   70    61 0.797   2.65
 3.08 Intr - 133609 133463  147  0  0   87   66    72 0.887   4.25
 3.07 Intr - 134989 134916   74  1  2   88  107    34 0.816   3.50
 3.06 Intr - 141384 141199  186  0  0   73   94   162 0.954  15.19
 3.05 Intr - 145326 145276   51  0  0  130   99    13 0.979   5.70
 3.04 Intr - 154872 154756  117  0  0  114   89    54 0.977   8.76
 3.03 Intr - 160872 160729  144  0  0   45   99   129 0.942  10.18
 3.02 Intr - 169885 169711  175  0  1   46   57    85 0.230   1.14
 3.01 Init - 177429 177380   50  0  2   61   75    71 0.290   3.52
 3.00 Prom - 179418 179379   40                              -8.56

 4.00 Prom + 180427 180466   40                              -5.66
 4.01 Init + 182020 182180  161  0  2   93   94   154 0.196  15.81
 4.02 Intr + 182370 182540  171  0  0   75   75   285 0.991  24.96
 4.03 Intr + 183814 183912   99  1  0  100   91   123 0.992  13.03
 4.04 Intr + 184702 184777   76  1  1  107   86    89 0.999  10.12
 4.05 Intr + 185106 185191   86  2  2  108   73   100 0.980   9.12
 4.06 Intr + 187106 187166   61  2  1   61   88    50 0.955   1.04
 4.07 Intr + 187535 187601   67  1  1  101   43    45 0.829  -0.22
 4.08 Intr + 188242 188291   50  2  2  113   91    33 0.884   4.50
 4.09 Term + 191245 191430  186  0  0  118   43    67 0.808   2.69
 4.10 PlyA + 192538 192543    6                               1.05

 5.00 Prom + 192720 192759   40                              -4.36
 5.01 Init + 199464 199526   63  2  0   86  110   123 0.578  13.46

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  47150  47165   16  1  1   77   85     8 0.961  -0.39
S.002 Intr + 181995 182180  186  0  0  120   94   150 0.803  17.60


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:102544618_102757351|GENSCAN_predicted_peptide_1|501_aa
XFTGTDGPSGFGFELTFRLKRETGESAPPTWPAELMQGLARYVFQSENTFCSGDHVSWHS
PLDNSESRIQHMLLTEDPQMQPVQTPFGVVTFLQIVGVCTEELHSAQQWNGQGILELLRT
VPIAGGPWLITDMRRGETIFEIDPHLQERVDKGIETDGSNLSGVSAKCAWDDLSRPPEDD
EDSRSICIGTQPRRLSGKDTEQIRETLRRGLEINSKPVLPPINPQRQNGLAHDRAPSRKD
SLESDSSTAIIPHELIRTRQLESVHLKFNQESGALIPLCLRGRLLHGRHFTYKSITGDMA
ITFVSTGVEGAFATEEHPYAAHGPWLQPCPGLLRLPLWRTGREQACLLGGAAEEAGGRVS
PQRSPSPGSSPHYLSSFVPYLGAQGVREKTDSVDRRVCRENVGGFRRFDFSRGTLVRTPS
KSSELPAPESLIEEEARAFRLVRVLPSPCCSLADSEQNAHVCCQRTFRWGVLFKLPKEYS
WPEKKLKVSILPDVVFDSPLH

>gi568815588f:102544618_102757351|GENSCAN_predicted_CDS_1|1506_bp
nngtttacaggaacagatggacctagtggttttggctttgagttgacctttcgtctgaag
agagaaactggggagtctgccccaccaacatggcccgcagagttaatgcagggcttggca
cgatacgtgttccagtcagagaacaccttctgcagtggggaccatgtgtcctggcacagc
cctttggataacagtgagtcaagaattcagcacatgctgctgacagaggacccacagatg
cagcccgtgcagacaccctttggggtagttaccttcctccagatcgttggtgtctgcact
gaagagctacactcagcccagcagtggaacgggcagggcatcctggagctgctgcggaca
gtgcctattgctggcggcccctggctgataactgacatgcggaggggagagaccatattt
gagatcgatccacacctgcaagagagagttgacaaaggcatcgagacagatggctccaac
ctgagtggtgtcagtgccaagtgtgcctgggatgacctgagccggccccccgaggatgac
gaggacagccggagcatctgcatcggcacacagccccggcgactctctggcaaagacaca
gagcagatccgggagaccctgaggagaggactcgagatcaacagcaaacctgtccttcca
ccaatcaaccctcagcggcagaatggcctcgcccacgaccgggccccgagccgcaaagac
agcctggaaagtgacagctccacggccatcattccccatgagctgattcgcacgcggcag
cttgagagcgtacatctgaaattcaaccaggagtccggagccctcattcctctctgccta
aggggcaggctcctgcatggacggcactttacatataaaagtatcacaggtgacatggcc
atcacgtttgtctccacgggagtggaaggcgcctttgccactgaggagcatccttacgcg
gctcatggaccctggttacaaccatgtcccgggctgctgcgtctgcccctgtggagaaca
gggagggagcaggcctgtctcctgggcggagctgctgaggaggctggagggagggtttcc
cctcagaggagcccctcacctggatcttcaccccattatctttcttcctttgtgccctac
ctgggtgctcaaggtgtacgggagaagacagattctgttgaccgaagagtttgtagagaa
aatgttggaggatttagaagatttgacttctccagaggaacccttgtaaggacacccagc
aaatcgtctgaattgccagctcctgagagcctcattgaagaggaagccagggccttcagg
ctagtacgagttctccccagcccctgctgttccctggcagattctgaacagaacgcccat
gtctgttgccagagaacattccgctggggagttctgttcaaacttcccaaagagtacagc
tggcctgaaaagaagctgaaggtctccatcctgcctgacgtggtgttcgacagtccgcta
cactag

>gi568815588f:102544618_102757351|GENSCAN_predicted_peptide_2|803_aa
MRRWEKTLSLPLHPSSILLSPKTPFALGRGAQTAPRSRPARAPQPAPGQPAGGRLHRGPG
TAGLPLPPRPDLAALGAAALASWPRRPRAPAPAREALGRRRRRSPLRARREDRGSLLRGA
GTRKALLTERPSGPAGAGARGSVGLQRLRTDPRGWGVGEACPGPLPAAAMAENWKNCFEE
ELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKDSGLVRCPECNQAYNQKPGLEKNLKL
TNIVEKFNALHVEKPPAALHCVFCRRGPPLPAQKVCLRCEAPCCQSHVQTHLQQPSTARG
HLLVEADDVRAWSCPQHNAYRLYHCEAEQVAVCQYCCYYSGAHQGHSVCDVEIRRNEIRA
IAQPCLPAGLAERLRVEVECAFLTVGSTTVLLCECPLSIFQCLGNLICSFGELGWGREGD
GRQKMLMKQQDRLEEREQDIEDQLYKLESDKRLVEVAKPKAMLRGGGGLSAGLWEKVNQL
KEEVRLQYEKLHQLLDEDLRQTVEVLDKAQAKFCSENAAQALHLGERMQEAKKLLGSLQL
LFDKTEDVSFMKNTKSVKILMDRTQTCTSSSLSPTKIGHLNSKLFLNEVAKKEKQLRKML
EGPFSTPVPFLQSVPLYPCGVSSSGAEKRKHSTAFPEASFLETSSGPVGGQYGAAGTASG
EGQSGQPLGPCSSTQHLVALPGGAQPVHSSPVFPPSQYPNGSAAQQPMLPQYGGRKILVC
SVDNCYCSSVANHGGHQPYPRSGHFPWTVPSQEYSHPLPPTPSVPQSLPSLAVRDWLDAS
QQPGHQDFYRVYGQPSTKHYVTS

>gi568815588f:102544618_102757351|GENSCAN_predicted_CDS_2|2412_bp
atgaggcggtgggaaaagaccctctccctgccactacatccctcttctatcctcctctca
ccaaaaaccccttttgccttaggaagaggggcccagacagcgccccggagtcggcccgcc
cgcgccccgcagcccgcgcccggccagccagccgggggacgcctgcaccgtggcccgggg
accgccggcctgcccctcccgccccgtccggatctagcagccctcggcgcggccgccctc
gcctcctggccccgcagaccccgggctccggcccctgcgagggaggcgctcgggaggagg
aggagacgcagcccgctgcgcgcgcggcgtgaggaccgcggctccctcctccggggggcg
ggcacgcggaaggcgctgctgactgagcgaccgtcggggccggctggggccggagctcgg
ggctcggtgggcctacagcggctccggacggacccccggggctggggagtcggggaggcc
tgccccggccccctgcccgcggccgccatggcggagaattggaagaactgcttcgaggag
gagctcatctgccctatctgcctgcacgttttcgtggagccagtgcagctgccgtgcaaa
cacaacttctgccggggctgcatcggcgaggcgtgggccaaggacagcggcctcgtacgc
tgcccagagtgcaaccaggcctacaaccagaagccgggcctggagaagaacctgaagctc
accaacatcgtggagaagttcaatgccctgcacgtggagaagccgccggcggcgctgcac
tgcgtgttctgccgccgcggccccccgctgcccgcgcagaaggtctgcctgcgctgcgag
gcgccctgctgccagtcccacgtgcagacgcacctgcagcagccctccaccgcccgcggg
cacctcctggtggaggcggacgacgtgcgggcctggagctgcccgcagcacaacgcctac
cgcctctaccactgcgaggccgagcaggtggccgtgtgccagtactgctgctactacagc
ggcgcgcatcagggacactcggtgtgcgacgtggagatccgaaggaatgaaatccgggca
attgcgcagccgtgtctgcctgccgggcttgctgagcgcctgcgagttgaagttgagtgt
gccttcctgacagttggcagcactactgtgctgctgtgtgagtgcccgctcagcattttc
cagtgtcttggcaacctgatttgctcattcggtgaactggggtggggtcgtgaaggggac
ggcaggcagaagatgctcatgaagcagcaggaccggctggaggagcgagagcaggacatt
gaggaccagctgtacaaactcgagtcagacaagcgcctggtggaggtagctaagcccaag
gccatgctgcggggtgggggtggcttgagcgcagggctttgggagaaagtgaaccaactg
aaggaggaagttcggctgcagtacgagaagctgcaccagctgctggacgaggacctgcgg
cagacagtggaggtcctagacaaggcccaggccaagttctgcagcgagaacgcagcgcag
gcgctgcacctcggggagcgcatgcaggaggccaagaagctgctgggctccctgcagctg
ctctttgataagacggaggatgtcagcttcatgaagaacaccaagtctgtgaaaatcctg
atggacaggacccagacctgcacgagcagcagcctttcccccactaagatcggccacctg
aactccaagctcttcctgaacgaagtggccaagaaggagaagcagctgcggaaaatgcta
gaaggccccttcagcacgccggtgcccttcctgcagagtgtccccctgtacccttgcggc
gtgagcagctctggggcggaaaagcgcaagcactcaacggccttcccagaggccagtttc
ctagagacgtcgtcgggccctgtgggcggccagtacggggcggcgggcacagccagcggt
gagggccagtctgggcagcccctggggccctgcagctccacgcagcacttggtggccctg
ccgggcggcgcccaaccagtgcactcaagccccgtgttccccccatcgcagtatcccaat
ggctccgccgcccagcagcccatgctcccccagtatggcggccgcaagattctcgtctgt
tctgtggacaactgttactgttcttccgtggccaaccatggcggccaccagccctacccc
cgctccggccactttccctggacagtgccctcgcaggagtactcacacccgctcccgccc
acaccctccgtcccccagtcccttcccagcctggcggtcagagactggcttgacgcctcc
cagcagcccggccaccaggatttctacagggtgtatgggcagccgtccaccaaacactac
gtgacgagctaa

>gi568815588f:102544618_102757351|GENSCAN_predicted_peptide_3|441_aa
MQGDQLDENPSNPGKKRRAGGGLCSSRSPPTAWAGALAHLRTLGKAELHPAPYCCSAPQL
CVRGTSGAAPQQLPLGLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHIT
PTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADRKRFEETGQE
LAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGV
QGASQLLFKLGAEPFTRQVPTSVENWCCPPSGFRRHRPHLGKGQMSALGQPSDYLVLLPK
CTDSNWQSCNHCKFSLLREGAFKVIVPLREPSPQSLWMLVLKAIRSGPDPFKPIWSAAGR
EVNAHRPASHTEKQILMTFDCNDIWNDPEDPALGSQSQLLLWMPPVEGAGAAAIPYARRV
DQKFIPPLHPVLGTPLPAFYF

>gi568815588f:102544618_102757351|GENSCAN_predicted_CDS_3|1326_bp
atgcagggagaccagctggacgagaaccccagtaatccaggcaagaagaggcgagccggc
ggcggcctctgcagctcccgtagcccgcccactgcgtgggcgggcgccttagcgcacttg
cgcactctggggaaagcggagctgcaccccgccccgtattgctgctcagctcctcagctg
tgcgtgcgagggacgtcgggggcggcgccgcagcagttgcccctgggcttgctctcaatt
ttgcgcaagttgaaaagtgcaccagaccaggaggtgagaatacttctcctgggcttggat
aatgctggcaagaccactcttctgaagcagcttgcatctgaagacatcagccacatcaca
cctacacagggtttcaacatcaaaagtgtacaatcacaaggttttaaactgaatgtatgg
gacattggtggacagaggaaaatcagaccatactggaagaattattttgaaaataccgat
attcttatatatgtaatcgacagtgcagacagaaaaagatttgaagagacgggtcaggaa
ctagcggaattactggaggaagaaaaactaagttgtgtgccagtgctcatctttgctaat
aagcaggatttgctcacagcagcccctgcctctgaaattgcagaaggactgaacctgcat
accatccgcgaccgagtctggcagatccagtcttgctcagctctcacaggagagggcgtt
cagggtgcttcccagctcctctttaagcttggggcagaacccttcacccggcaggtaccc
acatccgtggagaactggtgctgtccaccttcgggctttcggcgccaccggcctcatctt
ggcaaaggtcagatgtcggctctgggacagccgtcagattatctagttctgctgcccaag
tgcactgacagcaactggcagagttgtaatcactgtaaattcagccttctaagagagggc
gctttcaaggtcattgtgcctttaagggaaccttctccccagtccctctggatgctggtg
cttaaagctataagaagcgggccagacccttttaaacctatctggagtgctgcaggaaga
gaagtaaatgcacatcgccctgccagccacacagagaagcaaattcttatgacttttgac
tgtaatgacatctggaatgatccagaagaccctgccctggggtcccagagtcagctgctg
ctctggatgccaccagtagagggggcaggagctgctgccatcccctatgccaggagggtg
gaccagaagttcataccacctttacacccagttcttggaacacccctccctgcattctac
ttctga

>gi568815588f:102544618_102757351|GENSCAN_predicted_peptide_4|318_aa
MEADLSGFNIDAPRWDQRTFLGRVKHFLNITDPRTVFVSERELDWAKVMVEKSRMGVVPP
GTQVEQLLYAKKLYDSAFHPDTGEKMNVIGRMSFQLPGGMIITGFMLQFYRTMPAVIFWQ
WVNQSFNALVNYTNRNAASPTSVRQMALSYFTATTTAVATAVGMNMLTKKAPPLVGRWVP
FAAVAAANCVNIPMMRQQELIKGICVKDRNENEIGHSRRAAAIGITQVVISRITMSAPGM
ILLPVIMERLEKLHFMQPHLHGASGVWAFPTEMVSAVHSLLGLIDHAASALPDLPAVQKE
TGKGQEGQHLSEDKCPSA

>gi568815588f:102544618_102757351|GENSCAN_predicted_CDS_4|957_bp
atggaggctgacctgtctggctttaacatcgatgccccccgttgggaccagcgcaccttc
ctggggagagtgaagcacttcctaaacatcacggacccccgcactgtctttgtatctgag
cgggagctggactgggccaaggtgatggtggagaagagcaggatgggggttgtgccccca
ggcacccaagtggagcagctgctgtatgccaagaagctgtatgactcggccttccacccc
gacactggggagaagatgaatgtcatcgggcgcatgtctttccagcttcctggcggcatg
atcatcacgggcttcatgctccagttctacaggacgatgccggcggtgatcttctggcag
tgggtgaaccagtccttcaatgccttagtcaactacaccaacaggaatgcggcttccccc
acatcagtcaggcagatggccctttcctacttcacagccacaaccactgctgtggccacg
gctgtgggcatgaacatgttgacaaagaaagcgccgcccttggtgggccgctgggtgccc
tttgccgctgtggctgcggctaactgtgtcaatatccccatgatgcgacagcaggagctc
ataaagggaatctgcgtgaaggacaggaatgaaaatgagattggtcattcccggagagct
gcggccataggcatcacccaagtagttatttctcggatcaccatgtcagctcctgggatg
atcttgctgccagtcatcatggaaaggcttgagaaattgcacttcatgcagcctcatctt
catggtgccagtggcgtgtgggcttttcccacagaaatggtatctgctgttcattcctta
cttggtttaattgaccatgctgccagcgcgctccctgatctgcctgctgtccagaaggag
acagggaaggggcaggaagggcagcacctgtctgaggacaagtgtccatcagcctaa

>gi568815588f:102544618_102757351|GENSCAN_predicted_peptide_5|21_aa
MALLLLQALPSPLSARAEPPQ

>gi568815588f:102544618_102757351|GENSCAN_predicted_CDS_5|63_bp
atggcgctcctgctcctccaggcgctgcccagccccttgtcagccagggctgaacccccg
cag