GENSCAN 1.0	Date run:  6-Nov-116	Time: 09:02:11

Sequence gi568815589f:36069503_36271266 : 201764 bp : 44.71% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  13863  14060  198  1  0  118   92   -15 0.122   1.22
 1.02 Intr +  18192  18302  111  1  0   34   44   135 0.464   4.05
 1.03 Intr +  18405  18459   55  1  1  122   78   -37 0.642  -3.26
 1.04 Intr +  21662  21841  180  2  0  103  110    22 0.746   4.88
 1.05 Intr +  30829  31041  213  1  0  128  108    19 0.932   5.73
 1.06 Intr +  32592  32728  137  0  2   76   89    35 0.960   2.61
 1.07 Intr +  35641  35781  141  2  0   96  116    34 0.989   7.32
 1.08 Intr +  40455  40577  123  1  0   84   62    56 0.891   3.16
 1.09 Intr +  42803  42974  172  0  1   98  115    11 0.688   3.80
 1.10 Intr +  47483  47675  193  2  1  107   92   104 0.990  12.19
 1.11 Intr +  49255  49465  211  0  1   80   65   147 0.966  10.09
 1.12 Intr +  51161  51234   74  0  2   67   94   -10 0.579  -3.37
 1.13 Intr +  52031  52186  156  1  0  108  109   176 0.963  21.91
 1.14 Intr +  53322  53426  105  2  0   92   92    63 0.930   7.51
 1.15 Intr +  70198  70342  145  0  1   75   50    71 0.007   1.86
 1.16 Intr +  78284  78392  109  0  1   60   79   178 0.935  13.44
 1.17 Intr +  79045  79148  104  1  2   53   94    93 0.994   6.22
 1.18 Intr +  81370  81447   78  2  0   52  105    41 0.678   1.72
 1.19 Term +  92860  93020  161  2  2  124   32   250 0.959  21.10
 1.20 PlyA +  93441  93446    6                              -1.75

 2.00 Prom +  93470  93509   40                              -6.76
 2.01 Sngl + 100001 101767 1767  1  0   94   41  2604 0.927 250.94
 2.02 PlyA + 102540 102545    6                               1.05

 3.00 Prom + 103535 103574   40                              -4.86
 3.01 Init + 121555 121771  217  0  1  108   80   405 0.876  39.05
 3.02 Intr + 128049 128086   38  1  2   64   92    47 0.850   0.68
 3.03 Intr + 129477 129594  118  2  1   38   87    92 0.962   4.14
 3.04 Intr + 134566 134677  112  2  1   89   82   112 0.984  10.14
 3.05 Term + 142101 142272  172  0  1  104   49   300 0.989  25.00
 3.06 PlyA + 142534 142539    6                               1.05

 4.15 PlyA - 142577 142572    6                               1.05
 4.14 Term - 148098 147863  236  1  2   95   41   271 0.995  19.58
 4.13 Intr - 148797 148681  117  1  0   89   99    80 0.919   9.64
 4.12 Intr - 150518 150336  183  0  0   79   12    92 0.159   0.46
 4.11 Intr - 153364 153275   90  2  0   70  110    45 0.797   4.87
 4.10 Intr - 154000 153871  130  1  1   80   82    28 0.986   1.67
 4.09 Intr - 157956 157746  211  2  1   88   93    71 0.985   6.52
 4.08 Intr - 159606 159519   88  1  1   56   97    52 0.982   1.93
 4.07 Intr - 164630 164418  213  0  0   75   68   222 0.973  17.59
 4.06 Intr - 165835 165734  102  2  0   37   58    84 0.516   0.45
 4.05 Intr - 167482 167330  153  2  0   68   91    82 0.902   6.54
 4.04 Intr - 176980 176529  452  0  2   64   84   470 0.826  37.15
 4.03 Intr - 179895 179690  206  0  2   70   86   153 0.709  11.30
 4.02 Intr - 189393 189080  314  1  2   50   81   190 0.050  10.40
 4.01 Init - 195721 195472  250  1  1   63   39   173 0.059   7.53

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  67278  67129  150  0  0   61   55   198 0.899   5.97
S.002 Init - 169010 168944   67  2  1   64   58    50 0.860   0.83
S.003 Sngl - 170722 170405  318  1  0   71   38   166 0.889   5.88
S.004 Sngl - 195721 195422  300  1  0   63   48   212 0.808  10.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:36069503_36271266|GENSCAN_predicted_peptide_1|888_aa
XGSVCCSYAGHHTNCREYCQAIFRTDSSPGPSQIKAVENYCASISPQLIHCVNNYTQSYP
MRNPTDSLYCCDRAEDHACQNACKRILMSKKTEMEIVDGLIEGCLDGAKLHCCSKANTST
CRELCTKLYSMSWGNTQSWQEFDRFCEYNPVEVSMLTCLADVREPCQLGCRNLTYCTNFN
NRPTELFRSCNAQSDQGAMNDMKLWEKGSIKMPFINIPVLDIKKCQPEMWKAIACSLQIK
PCHSKSRGSIICKSDCVEILKKCGDQNKFPEDHTAESICELLSPTDDLKNCIPLDTYLRP
STLGNIVEEVTHPCNPNPCPANELCEVNRKGCPSGDPCLPYFCVQGHGTSFSIDCNVCSC
FAGNLVCSTRLCLSEHSSEDDRRTFTGLPCNCADQFVPVCGQNGRTYPSACIARCVGLQD
HQFEFGSCMSKDPCNPNPCQKNQRCIPKPQVCLTTFDKFGCSQYECVPRQLACDQVQDPV
CDTDHMEHNNLCTLYQRGKSLSYKGPCQPFCRATEPVCGHNGETYSSVCAAYSDRVAVDY
YGDCQAVGVLSEHSSVAECASVKCPSLLAAGCKPIIPPGACCPLCAGMLRVLFDKEKLDT
IAKVTNKKPITVLEILQKIRMHVSVPQCDVFGYFSIESEIVILIIPVDHYPKALQIEACN
KEAEKIESLINSDSPTLASHVPLSALIISQIHPRAAWHNRRYCKIITQLAQLKFQKTLGL
VIEDSQILLPAVVSLLGLASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEAL
ASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTA
MVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVLPPKK

>gi568815589f:36069503_36271266|GENSCAN_predicted_CDS_1|2667_bp
ntgggctcggtttgttgcagttatgcaggtcatcacacaaactgccgagaatactgtcaa
gccatttttcgaacagactcttctcctggtccatctcagataaaagcagtggaaaattat
tgcgcctctattagtccacaattaatacattgtgtgaacaattatactcaatcttatcca
atgaggaacccaacggatagtttatattgctgtgacagagctgaagaccatgcttgccaa
aatgcctgcaagagaatcctgatgtccaagaaaacggaaatggagattgttgatggtctc
atcgagggttgcctcgatggggctaaattgcattgttgttctaaagcaaacacttcaaca
tgtagggaactctgcactaaactttacagcatgagctggggcaatacacagagttggcaa
gagtttgatcgcttttgtgaatataatccagtggaagtgtccatgttgacctgtttagcg
gatgtccgggaaccttgccagttgggctgtagaaaccttacttactgtactaattttaac
aacaggccaacagaacttttcaggagttgtaatgcacagtcagatcaaggagccatgaat
gacatgaagttgtgggagaaaggaagcataaagatgccatttatcaatatacctgttctt
gatattaaaaagtgccagccagagatgtggaaagcaatagcttgttcactgcagattaaa
ccttgtcatagtaaatctcggggaagtattatttgcaaatcagattgtgtggagattctt
aaaaaatgtggagaccagaacaaattccctgaagaccacacagctgaaagtatttgtgag
cttctgtcacctacagatgatctgaagaattgtatacctttggatacatacctcaggcca
agtactttaggtaacattgtagaagaagtgactcatccctgtaacccaaatccttgccct
gccaatgagctctgtgaagtaaaccgaaaaggatgtccatctggagatccctgtcttcca
tacttttgtgttcaaggtcatggaacatcctttagtattgactgcaatgtctgttcttgt
tttgctggcaatttggtgtgctctacccgcctttgcctcagtgagcacagttcagaagat
gaccgtcgtaccttcacaggtctgccctgtaactgtgcagatcagtttgtccctgtatgt
gggcagaatgggcgcacttaccccagtgcctgcattgctcgctgtgtgggcctccaagac
catcagtttgagtttggatcatgcatgtcaaaggatccatgtaatcctaatccctgccaa
aaaaaccaaaggtgcatacccaaaccacaggtctgcctgacgacttttgataaatttgga
tgtagccagtatgagtgtgtaccaagacagctcgcgtgtgaccaggtccaagatcctgtt
tgtgacacagaccacatggagcacaacaatctctgcactttataccaaagaggaaaaagc
ctctcttacaaaggtccctgccagcccttttgcagagcaaccgagcccgtatgtgggcac
aatggtgagacctacagcagtgtgtgtgctgcctactcggatcgcgtggcagtcgattac
tatggggactgccaggccgtcggagtcctctcagagcacagctccgtcgccgagtgtgct
tctgtcaagtgtccttcgctcttggcagctggatgcaaacccatcatcccaccgggtgct
tgttgcccattatgtgctgggatgttaagagttttatttgacaaagaaaaactggatact
attgctaaggtaacaaataaaaagccaataacagttctggaaatacttcagaaaatccgc
atgcacgtgtctgtcccacagtgtgatgtgtttggatacttcagcattgaatcagaaatt
gtgatcctgatcattcccgtcgatcactatccaaaagctctgcagattgaagcctgcaat
aaagaagcagagaagattgagtcccttatcaactctgacagcccgactttggcgtcccat
gtccctctctctgccctcatcatttcccagatacaccccagagctgcttggcataacagg
cgttattgtaaaatcatcacacagctggcacagttgaaattccagaagacgcttggccta
gtgatcgaagactcccagatcctgctcccagctgtggtttctctgctgggacttgcttcc
aaacagtttcataatgaggtcctgaaggcccacaatgagtaccggcagaagcacggcgtc
cccccactgaagctctgcaagaacctcaaccgggaggctcaacagtattctgaggccctg
gccagcacgaggatcctcaagcacagcccggagtccagccgtggccagtgtggggagaac
cttgcatgggcatcctatgatcagacaggaaaggaggtggctgatagatggtacagtgaa
atcaagaactataacttccagcagcctggcttcacctcggggactggacacttcacggcc
atggtatggaagaacaccaagaagatgggcgtggggaaggcgtccgcaagtgacgggtcc
tcctttgtggtggccagatacttcccagcggggaatgttgtcaatgagggcttcttcgaa
gaaaacgtcctgccgccgaagaagtaa

>gi568815589f:36069503_36271266|GENSCAN_predicted_peptide_2|588_aa
MKLEFTEKNYNSFVLQNLNRQRKRKEYWDMALSVDNHVFFAHRNVLAAVSPLVRSLISSN
DMKTADELFITIDTSYLSPVTVDQLLDYFYSGKVVISEQNVEELLRGAQYFNTPRLRVHC
NDFLIKSICRANCLRYLFLAELFELKEVSDVAYSGIRDNFHYWASPEGSMHFMRCPPVIF
GRLLRDENLHVLNEDQALSALINWVYFRKEDREKYFKKFFNYINLNAVSNKTLVFASNKL
VGMENTSSHTTLIESVLMDRKQERPCSLLVYQRKGALLDSVVILGGQKAHGQFNDGVFAY
IIQENLWMKLSDMPYRAAALSATSAGRYIYISGGTTEQISGLKTAWRYDMDDNSWTKLPD
LPIGLVFHTMVTCGGTVYSVGGSIAPRRYVSNIYRYDERKEVWCLAGKMSIPMDGTAVIT
KGDRHLYIVTGRCLVKGYISRVGVVDCFDTSTGDVVQCITFPIEFNHRPLLSFQQDNILC
VHSHRQSVEINLQKVKASKTTTSVPVLPNSCPLDVSHAICSIGDSKVFVCGGVTTASDVQ
TKDYTINPNAFLLDQKTGKWKTLAPPPEALDCPACCLAKLPCKILQRI

>gi568815589f:36069503_36271266|GENSCAN_predicted_CDS_2|1767_bp
atgaaattggaattcacggagaaaaactacaatagcttcgtgctgcagaacctgaacaga
cagaggaaacgcaaagagtactgggacatggccctgagtgtggacaaccacgtcttcttt
gcacatcgcaatgtgctggctgctgtctccccactggtgaggagcctcatctccagcaat
gacatgaagaccgctgatgagcttttcatcaccattgacaccagttacctgagcccggtc
acagtggaccagcttctggactacttctatagcggcaaggtggtgatctccgagcaaaat
gtggaggagctgcttcgtggggctcagtatttcaacacaccacgccttcgagttcactgt
aacgacttccttattaagtccatctgccgtgccaactgcttgcgctacctcttcttggct
gagctgtttgagctcaaagaggtatcagacgtagcttactctggcattcgggacaacttc
cactactgggccagtcctgagggctccatgcacttcatgcgctgtccacctgttatcttt
ggccgcctgctccgtgatgaaaaccttcacgtgctcaatgaagaccaggcgctcagcgca
ctcatcaattgggtgtacttccggaaggaggatcgggagaagtatttcaagaagttcttc
aattacatcaatctcaatgctgtctccaataagacgctggtgtttgccagcaacaagctg
gtgggcatggagaacacctcatcccatacaaccctgattgagagtgtcctgatggaccgc
aagcaggagcggccatgcagcctgctggtctaccagcggaaaggggccctgcttgattcc
gtggtcatcctcggtggccagaaggcccacggccagttcaatgatggagtgtttgcttat
atcatccaggagaacctgtggatgaagctctcagacatgccctatcgggcagcagcactt
agtgccacctctgctggtcgctacatctacatctctggtggcaccactgagcagatttca
gggctgaagacagcctggcggtatgacatggatgacaactcctggaccaagttgcctgac
ctgcccatcgggcttgtcttccacaccatggtgacctgtggggggacagtgtactcagtg
ggcgggagcattgccccaaggcggtatgtctccaacatctatcgctatgatgagcggaag
gaagtctggtgcctggcaggaaagatgagcatccccatggatggcaccgccgtgatcact
aaaggagacaggcatctgtacattgtcactggacggtgcttggtgaaaggttatatctcc
cgggtcggggtagtggactgctttgacaccagcactggggacgtggtccagtgtatcacc
ttccccattgagttcaaccatcggcccctgctctctttccaacaggacaacatcctctgc
gtgcacagccaccggcagagtgtggaaatcaatctgcagaaggtgaaggcaagcaagacg
accacctcagtgcctgtcttgcccaacagctgccccttggatgtgtcccatgctatatgc
tccattggagacagcaaggtgtttgtatgtgggggtgtcaccactgccagcgatgtccag
acaaaggactacaccatcaatccaaatgccttcttgctggaccaaaagacaggcaagtgg
aagaccctggctcctccaccagaggcactggactgtcctgcctgctgtctagccaagcta
ccttgcaagattcttcaaaggatttaa

>gi568815589f:36069503_36271266|GENSCAN_predicted_peptide_3|218_aa
MAELDPFGAPAGAPGGPALGNGVAGAGEEDPAAAFLAQQESEIAGIENDEAFAILDGGAP
GPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDSYAAISQVDRLQSEPESIRKWREEQMER
LEALDANSRKQEAEWKEKAIKELEEWYARQDEQLQKTKANNRAAEEAFVNDIDESSPGTE
WERVARLCDFNPKSSKQAKDVSRMRSVLISLKQAPLVH

>gi568815589f:36069503_36271266|GENSCAN_predicted_CDS_3|657_bp
atggctgagctggatccgttcggcgcccctgccggcgcccctggcggtcccgcgctgggg
aacggagtggccggcgccggcgaagaagacccggctgcggccttcttggcgcagcaagag
agcgagattgcgggcatcgagaacgacgaggccttcgccatcctggacggcggcgccccc
gggccccagccgcacggcgagccgccggggggtccggatgctgttgatggagtaatgaat
ggtgaatactaccaggaaagtaatggtccaacagacagttatgcagctatttcacaagtg
gatcgattgcagtcagagcctgaaagtatccgtaaatggagagaagaacaaatggaacgc
ttggaagcccttgatgccaattctcggaagcaagaagcagagtggaaagaaaaggcaata
aaggagctagaagaatggtatgcaagacaggacgagcagctacagaaaacaaaagcaaac
aacagggcagcagaagaagcctttgtaaatgacattgacgagtcgtccccaggcactgag
tgggaacgggtggcccggctgtgtgactttaaccccaagtctagcaagcaggccaaagat
gtctcccgcatgcgctcagtcctcatctccctcaagcaggccccgctggtgcactga

>gi568815589f:36069503_36271266|GENSCAN_predicted_peptide_4|914_aa
MEENRRTQRLVFISIRTNPGTCRAGTTASLQPDREQQWAPRWIRSTADTLPDPEGWKSAA
GLRLRQTAVVDNERKLSLSGNKHAVTARVNVRDRCGVAALHDSIVAVLVYEITEGTRGAR
NPSLGARPKQLPSGKTRASVRVSPVEEDASGREHKLAGQPRSSSSAAEAMEDGPLVSTLP
APQNTAGKELYFKNLSKRNKQIMEKNGNNRKLRVCVATCNRADYSKLAPIMFGIKTEPEF
FELDVVVLGSHLIDDYGNTYRMIEQDDFDINTRLHTIVRGEDEAAMVESVGLALVKLPDV
LNRLKPDIMIVHGDRFDALALATSAALMNIRILHIEGGEVSGTIDDSIRHAITKLAHYHV
CCTRSAEQHLISMCEDHDRILLAGCPSYDKLLSAKNKDYMSIIRMWLGDDVKSKDYIVAL
QHPVTTDIKHSIKMFELTLDALISFNKRTLVLFPNIDAVQDSLRKMDYRSLKPKRGFQLN
RNLNLGIVVVPSGSKEMVRVMRKKGIEHHPNFRAVKHVPFDQFIQLVAHAGCMIGNSSCG
VREVGAFGTPVINLGTRQIGRETGENVLHVRDADTQDKILQALHLQFGKQYPCSKIYGDG
NAVPRILKFLKSIDLQEPLQKKFCFPPVKENISQDIDHILETLSALAVDLGGTNLRVAIV
SMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVDNDGNCAALAERKF
GQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIE
AYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGNAKAQSILRTAGTA
LGLGVVNILHTMNPSLVILSGVLASHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPALLG
AASMVLDYTTRRIY

>gi568815589f:36069503_36271266|GENSCAN_predicted_CDS_4|2745_bp
atggaagagaaccgtagaacccagcgactagtgttcatctcaattaggacgaacccaggc
acttgccgtgcaggaacaacggcaagccttcagcccgatcgggagcagcagtgggcgcct
cgctggatcaggagcacagcagacaccctgccagatccggaggggtggaagtcagcggcg
ggtctgcgactgcggcaaacagcagtggtggacaacgagcgaaagcttagcttgagcggt
aacaaacacgcagtcacggcaagggttaacgtcagggaccgctgtggggtggccgcgcta
cacgacagtatagttgcggtcctggtttatgaaataactgagggaacaagaggcgcaaga
aatccctccttgggtgcaagaccaaaacaactacccagcgggaagactcgggcttcagtg
cgtgtgtcgccagtggaggaggacgcttcggggcgggagcacaagctggcaggacagccc
cgcagcagctccagcgcggcagaggccatggaagatggtccgctggtcagcaccctgcct
gcgcctcaaaataccgccgggaaggaactctattttaagaacctctcaaaacgaaacaag
caaatcatggagaagaatggaaataaccgaaagctgcgggtttgtgttgctacttgtaac
cgtgcagattattctaaacttgccccgatcatgtttggcattaaaaccgaacctgagttc
tttgaacttgatgttgtggtacttggctctcacctgatagatgactatggaaatacatat
cgaatgattgaacaagatgactttgacattaacaccaggctacacacaattgtgagggga
gaagatgaggcagccatggtggagtcagtaggcctggccctagtgaagctgccagatgtc
cttaatcgcctgaagcctgatatcatgattgttcatggagacaggtttgatgccctggct
ctggccacatctgctgccttgatgaacatccgaatccttcacattgaaggtggggaagtc
agtgggaccattgatgactctatcagacatgccataacaaaactggctcattatcatgtg
tgctgcacccgcagtgcagagcagcacctgatatccatgtgtgaggaccatgatcgcatc
cttttggcaggctgcccttcctatgacaaacttctctcagccaagaacaaagactacatg
agcatcattcgcatgtggctaggtgatgatgtaaaatctaaagattacattgttgcacta
cagcaccctgtgaccactgacattaagcattccataaaaatgtttgaattaacattggat
gcacttatctcatttaacaagcggaccctagtcctgtttccaaatattgacgcagtacag
gactccctccggaaaatggattatcgaagccttaagccaaagaggggctttcaactgaat
cgaaacctgaatcttggaatagtagtggtgccttctgggagcaaagagatggttcgagtg
atgcggaagaagggcattgagcatcatcccaactttcgtgcagttaaacacgtcccattt
gaccagtttatacagttggttgcccatgctggctgtatgattgggaacagcagctgtggg
gttcgagaagttggagcttttggaacacctgtgatcaacctgggaacacgtcagattgga
agagaaacaggggagaatgttcttcatgtccgggatgctgacacccaagacaaaatattg
caagcactgcaccttcagtttggtaaacagtacccttgttcaaagatatatggggatgga
aatgctgttccaaggattttgaagtttctcaaatctatcgatcttcaagagccactgcaa
aagaaattctgctttcctcctgtgaaggagaatatctctcaagatattgaccatattctt
gaaactctaagtgccttggccgttgatcttggcgggacgaacctccgagttgcaatagtc
agcatgaagggtgaaatagttaagaagtatactcagttcaatcctaaaacctatgaagag
aggattaatttaatcctacagatgtgtgtggaagctgcagcagaagctgtaaaactgaac
tgcagaattttgggagtagacaatgatggcaactgtgctgccctggcggaaaggaaattt
ggccaaggaaagggactggaaaactttgttacacttatcacaggcacaggaatcggtggt
ggaattatccatcagcatgaattgatccacggaagctccttctgtgctgcagaactgggc
caccttgttgtgtctctggatgggcctgattgttcctgtggaagccatgggtgcattgaa
gcatacgcctctggaatggccttgcagagggaggcaaaaaagctccatgatgaggacctg
ctcttggtggaagggatgtcagtgccaaaagatgaggctgtgggtgcgctccatctcatc
caagctgcgaaacttggcaatgcgaaggcccagagcatcctaagaacagctggaacagct
ttgggtcttggggttgtgaacatcctccataccatgaatccctcccttgtgatcctctcc
ggagtcctggccagtcactatatccacattgtcaaagacgtcattcgccagcaggccttg
tcctccgtgcaggacgtggatgtggtggtttcggatttggttgaccccgccctgctgggt
gctgccagcatggttctggactacacaacacgcaggatctactag