GENSCAN 1.0	Date run:  7-Nov-116	Time: 00:58:30

Sequence gi568815586r:64951352_65221191 : 269840 bp : 38.27% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5231   5425  195  0  0   79   64   163 0.028  11.46
 1.02 Intr +  13737  13891  155  1  2  113   36    73 0.001   3.47
 1.03 Intr +  22080  22101   22  2  1   99  100     2 0.582  -1.30
 1.04 Intr +  25370  25511  142  0  1   91   59    69 0.509   2.79
 1.05 Intr +  30269  30407  139  2  1   93    5   118 0.273   3.55
 1.06 Intr +  31707  31802   96  2  0   87  100    12 0.236   1.59
 1.07 Intr +  43017  43160  144  2  0   89   55    93 0.328   5.66
 1.08 Intr +  46195  46304  110  0  2   74  100    13 0.171  -0.74
 1.09 Intr +  48561  48604   44  0  2   56  111    65 0.209   2.57
 1.10 Term +  62860  62897   38  2  2  139   48    49 0.018   2.52
 1.11 PlyA +  63557  63562    6                               1.05

 2.05 PlyA -  63876  63871    6                               1.05
 2.04 Term -  64895  64671  225  2  0   36   38   143 0.195  -0.10
 2.03 Intr -  65822  65714  109  1  1   78   72    79 0.228   4.67
 2.02 Intr -  80629  80483  147  0  0   83   39   109 0.411   3.93
 2.01 Init -  81535  80769  767  1  2   43   78   247 0.750  13.41
 2.00 Prom -  82810  82771   40                              -6.15

 3.03 PlyA -  82979  82974    6                               1.05
 3.02 Term -  83892  83240  653  1  2  -49   43   388 0.744  13.81
 3.01 Init -  84224  83915  310  2  1   88  -16   278 0.944  14.92
 3.00 Prom -  85342  85303   40                              -5.05

 4.09 PlyA -  85470  85465    6                               1.05
 4.08 Term -  88175  88051  125  0  2   41   55   120 0.338   1.57
 4.07 Intr - 101436 101310  127  0  1   18   26   125 0.320  -1.37
 4.06 Intr - 103862 103767   96  2  0   76   87   109 0.766   8.89
 4.05 Intr - 104775 104680   96  0  0   98   94    42 0.425   5.09
 4.04 Intr - 116474 116344  131  0  2   26  116    93 0.652   5.39
 4.03 Intr - 117553 117413  141  2  0  106  121    65 0.991  11.00
 4.02 Intr - 126499 126395  105  2  0   27   94   174 0.147  11.17
 4.01 Init - 138241 138052  190  1  1   69   92    81 0.511   5.85
 4.00 Prom - 138476 138437   40                              -5.15

 5.04 PlyA - 139500 139495    6                               1.05
 5.03 Term - 142438 142349   90  1  0   38   37   144 0.249   1.04
 5.02 Intr - 169205 169066  140  0  2   41  111    93 0.986   6.16
 5.01 Init - 169840 169693  148  1  1   95   82   187 0.996  17.10
 5.00 Prom - 171574 171535   40                              -6.85

 6.00 Prom + 172116 172155   40                              -7.95
 6.01 Init + 173586 173673   88  2  1  107   63    69 0.527   6.95
 6.02 Intr + 174598 174771  174  2  0   52   92    52 0.274   0.99
 6.03 Intr + 189105 189213  109  1  1   44   87    51 0.290  -0.98
 6.04 Intr + 196522 196629  108  1  0  131  102    74 0.866  11.58
 6.05 Intr + 199286 199356   71  2  2  105  111   -18 0.373   0.11
 6.06 Intr + 217729 217880  152  2  2   67   71   150 0.171  10.16
 6.07 Intr + 218186 219767 1582  1  1  -37   92  1553 0.124 130.72
 6.08 Intr + 245312 245488  177  0  0   70   40    99 0.001   2.27
 6.09 Intr + 259575 259612   38  1  2   68  108    22 0.003  -0.74
 6.10 Intr + 264626 264692   67  1  1   79   91    47 0.003   1.66
 6.11 Intr + 267201 267268   68  1  2   59   80    72 0.001   1.21

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -   7458   7358  101  1  2   85   39   132 0.835   5.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:64951352_65221191|GENSCAN_predicted_peptide_1|361_aa
XLSSYSISYTIAIPSSVLDLTGVFQQCIDIHQQILKLCVVGLQDGVYISSAPTLTLLVMV
ARLPVGHSTAGLLQFAGGLFQTLVALDFPIPGGFTSEGCRTAKMAASSFLWKLCPRGVGI
ITIQVFTSHTKLMSPCLHPSAIGVILKGHCFAIALERKFLDITTDKILANERSLSCRSVG
VAGRLLQTLFAWVSSAEAAEQQILLPDPSSGSFVPEGPLLQTSFSYSMSPPNEVLLHLLL
LTELPRWSTKISDIVWKSIMKIPVLFCSFLITGAYSPQSRTPCLLNRSRPSHADPLRVVI
ISSYSQHILIVALPVGSSVLFPSLIPFKPLINPSRRNESQALAIGADPIGKRRLHLMDES
F

>gi568815586r:64951352_65221191|GENSCAN_predicted_CDS_1|1086_bp
nctttgtcatcatacagcatttcttatactattgctatacctagttcagtgctagatctg
accggagtcttccaacaatgcatcgacatccaccagcagatcttgaagctctgcgtggta
ggactccaagatggcgtctacatttcctcggcccccaccctcacactacttgtcatggtt
gccagactccctgttggccactctactgcagggctgctacagtttgctgggggtctgttc
cagaccctagttgccttggatttccccatacctggaggtttcaccagtgaaggctgcaga
acagcaaagatggcagccagctccttcctctggaagctctgtcccaggggggtgggaatt
attacaattcaagtgtttacttcccatacaaaacttatgtctccatgtctccatccttca
gcaataggggtaattctgaaaggtcattgttttgcaattgcccttgaaaggaaattcttg
gacataacaacagataagattctagccaatgaaaggtccctcagctgcaggtctgttgga
gttgctggacgtctactccagaccctgtttgcctgggtgtcatcagcagaggctgcagaa
cagcaaatattgctgcctgatccttcctctggaagctttgttccagaggggcctcttctg
caaacaagcttctcttactctatgtctccaccaaatgaggtacttctgcatctacttctg
ctcacagaactgcctaggtggtccaccaagatttcagacattgtatggaaaagcatcatg
aaaatccctgtcctgttctgttcctttctgattactggtgcatacagcccccagtcacgt
actccctgcttgctcaatcgatcacgaccctctcatgcagaccctcttagagttgtgata
atcagtagttatagccagcatatattgattgttgctctaccagttggttcctctgtgctc
tttcccagtcttatcccatttaaacctctcatcaacccttcaaggagaaatgagtctcag
gcactggctataggggcagatcctattgggaagaggcgtctacatcttatggatgagagt
ttctaa

>gi568815586r:64951352_65221191|GENSCAN_predicted_peptide_2|415_aa
MNIDAKILSKILTNRIQQHIDRLVHHDQVGFTPGMQGWFNASKSINVIHHINRTKDKNQM
IISTDAEKAFDRIQQRFMLKTLSKLGIDGMYLKIMGAIYDKPTANIILDGQKLEAFPLKT
GTRQGCPLSPLLFNVVLEVLARAIRWEKEIKGIQLGKEEVKLSLFADDMIVCLESPIVLA
LNLLRLMGNFGKVSGCRVSVQKSQAFLYTNNGQTESRVMGELPFTIASGRMKCLGIQLAG
MWGISLGRTADHCSMRIGKNYFEVHMEPKKSPQSQDNPKPKEQIGGITLPDFKQYYKATV
IKTACPSSMSNLKDLKGNYHIHQGLIIITKIDPIWCLQRGRRSQESPAARRKVCLALLIA
CPVTGALQLMPMATLLKSQPKMDMKGERTHKSNSALVNCFMAFKEGKGKQLKIQP

>gi568815586r:64951352_65221191|GENSCAN_predicted_CDS_2|1248_bp
atgaacatcgatgcaaaaatcctcagtaaaatactgacaaatcgaatccagcagcacatc
gacaggcttgtccaccatgatcaagttggcttcacccctgggatgcaaggctggttcaat
gcaagcaaatcaataaacgtaatccatcatataaacagaaccaaagacaaaaaccagatg
attatctcaacagatgcagaaaaggcctttgacagaattcaacagcgcttcatgctaaaa
actctcagtaaactaggtattgatgggatgtatctcaaaataatgggagctatttatgac
aaacccacagccaatatcatactggatgggcaaaaactggaagcattccctttgaaaact
ggcacaagacagggatgccctctctcaccactcctattcaatgtagtgttggaggttctg
gccagggcaatcaggtgggagaaagaaataaagggtattcaattaggaaaagaggaagtc
aaattgtccctatttgcagatgacatgattgtatgtttggaaagccccattgtcttagcc
ctaaatctccttaggctgatgggcaactttggcaaagtctcaggatgcagggtcagtgtg
caaaaatcacaagcattcctatacaccaataatggacaaacagagagccgggtcatgggt
gaactcccattcacaattgcttcagggagaatgaaatgcctgggaatccagcttgcaggg
atgtgggggatctctttggggaggactgcagaccactgctcaatgagaattggaaaaaac
tactttgaagttcatatggaaccaaaaaagagcccacaaagccaagacaatcctaagcca
aaagaacaaattggaggcatcacgttacctgacttcaaacaatactacaaggctacagta
atcaaaacagcatgtcccagttccatgtcaaatctgaaggatcttaaagggaactatcac
attcaccaaggacttatcatcatcaccaagattgatcccatatggtgtctacaaagagga
aggagaagccaggaaagcccagctgcaagaaggaaggtttgtctggctctcctaattgct
tgcccagttaccggagcattacagctcatgccaatggccacactattgaagagccagcca
aaaatggacatgaaaggagaaaggacacataaaagcaattctgctctagtaaactgcttc
atggcgttcaaggaggggaaaggcaaacaactcaaaatacaaccttaa

>gi568815586r:64951352_65221191|GENSCAN_predicted_peptide_3|320_aa
MGRNQSRKADNSKNQSTSSPPKECSSSPATEQSRMENDFDELREEGFRRSVITNFSELKE
DVQTHHKEAKNLEKRLDEWLTRINSLEKTFNDLMEPKTMARELLAKVEERVPVIEDQMNE
MKREEKFREKRVKRNKQNLQEIWDYVKRPNLCLIGVPESDRENGNKLENTLQDIIQENFP
NLARQTNIQIQEIQRMPQRYSSRRATPGHVIVRFTKVEMKEKMLRAAREKGRVTHKGKPI
RLTADLSAETLQARREWGPIFNILKEKNFQPRVSDPAKLGFMGEGEIKSFTDKQMLRDFV
TTRPALEELLKEALNMERNN

>gi568815586r:64951352_65221191|GENSCAN_predicted_CDS_3|963_bp
atggggagaaaccagagcagaaaagctgacaattctaaaaatcagagcacctcttctcct
ccaaaggaatgcagctcctcaccagcaacagaacaaagccggatggagaatgactttgac
gagttgagagaagaaggcttcagacgatcagtaataacaaacttctctgagctaaaggag
gatgttcaaacccatcacaaagaagctaaaaaccttgaaaaaagattagacgaatggcta
actagaataaacagcttagagaagaccttcaatgacctgatggagccgaaaaccatggca
cgagaactactagctaaagtggaagaaagggtaccagtgattgaagatcaaatgaatgaa
atgaagcgagaagagaagtttagagaaaaaagagtaaaaagaaacaaacaaaacctccaa
gaaatatgggactatgtgaaaagaccaaatttatgtctgattggtgtacctgaaagtgac
agggagaatggaaacaagttggaaaacactcttcaggatattatccaggagaacttcccc
aacctagcaagacagaccaacattcaaattcaggaaatacagagaatgccacaaagatac
tcctcgagaagagcaactccaggacacgtaattgtcagattcaccaaagttgaaatgaag
gaaaaaatgttaagggcagccagagagaaaggtcgggttacccacaaagggaagcccatc
agactaacagcagatctctcggcagagactctacaagccagaagagagtgggggccaata
ttcaatattcttaaagagaagaattttcagcccagagtttcagatccagccaagctaggc
ttcatgggtgaaggagaaataaaatcctttacagacaagcaaatgctgagagattttgtc
acaaccaggcctgccttagaagagctcctaaaggaagcactaaacatggaaaggaacaac
tga

>gi568815586r:64951352_65221191|GENSCAN_predicted_peptide_4|336_aa
MWEKRLVGRAREKVVASQSLHCNKKPLRVLSRSSDIFQLAFKKKNWMMVPIEGINLERMS
YQGEYFYEFLSLRSLDKGIMADPTVNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEVDV
IVMNSEGNTILQTPQNAIFFKTCQQGCPYKLCFSLLKLSAQAGAEMEAFVMKDASASVLM
GSTDLTVRKANAHNPVEMEVNALVKANVSVPKVTRETSVQSLSASLAVVHMEPAMNPTNA
NVKKVGMEDTAIKHPHLEIMLLKASAISVPPSNPSIACQEDDLVLDSNANVFSRRAWESV
RHPVGPEDKAMGPDPTPPTPGLSTQLKGIELRSELK

>gi568815586r:64951352_65221191|GENSCAN_predicted_CDS_4|1011_bp
atgtgggagaagaggctggtgggcagagctagagagaaagttgtagctagccaaagtctt
cattgtaataagaaaccattaagggtgttaagtaggagcagtgatatattccagttggca
tttaagaagaaaaattggatgatggtgccgattgagggaataaatctggagcgcatgagt
taccagggagaatacttctatgaattcctgtccttgcgctccctggataaaggcatcatg
gcagatccaaccgtcaatgtccctctgctgggaacagtgcctcacaaggcatcagttgtt
caagttggtttcccatgtcttggaaaacaggatggggtggcagcatttgaagtggatgtg
attgttatgaattctgaaggcaacaccattctccaaacacctcaaaatgctatcttcttt
aaaacatgtcaacaagggtgtccatataagctttgtttctctctgctgaagctgagtgcc
caggcgggtgccgaaatggaggcttttgtaatgaaagacgcatctgcgagtgtcctgatg
ggttccacggacctcactgtgagaaaggcaaatgcccacaaccctgtcgaaatggaggta
aatgcattggtaaaagcaaatgtaagtgttccaaaggttaccagggagacctctgttcaa
agcctgtctgcgagcctggctgtggtgcacatggaacctgccatgaacccaacaaatgcc
aatgtcaagaaggttggcatggaagacactgcaataaaacacccccacttggagattatg
ctgctgaaagcgtctgccatcagtgtgcctccttcaaatccaagcattgcatgccaagaa
gatgacctggtgcttgattcaaatgcaaatgtgttttccaggagagcctgggagtcagta
cgccaccctgtggggccagaggacaaagccatgggcccagacccaaccccccccaccccg
ggtttgagcacacagctcaagggtattgagctgagatctgagctcaagtga

>gi568815586r:64951352_65221191|GENSCAN_predicted_peptide_5|125_aa
MARRSAFPAAALWLWSILLCLLALRAEAGPPQEESLYLWIDAHQARVLIGFEEDILIVSE
GKMAPFTHDFRKAQQRMPAIPVNIHSMNFTWQAAGQTIREPNPPIHMRELSLITSDQQSS
LKDDS

>gi568815586r:64951352_65221191|GENSCAN_predicted_CDS_5|378_bp
atggcccggaggagcgccttccctgccgccgcgctctggctctggagcatcctcctgtgc
ctgctggcactgcgggcggaggccgggccgccgcaggaggagagcctgtacctatggatc
gatgctcaccaggcaagagtactcataggatttgaagaagatatcctgattgtttcagag
gggaaaatggcaccttttacacatgatttcagaaaagcacaacagagaatgccagctatt
cctgtcaatatccattccatgaattttacctggcaagctgcagggcagaccatccgggaa
ccgaatccacctatccacatgcgggaactttctctcatcacatcagatcaacagtcatca
ctaaaagatgacagttga

>gi568815586r:64951352_65221191|GENSCAN_predicted_peptide_6|878_aa
MQDLQVLTCSMMSLEWEREGAAGDEAQNVACFALLLDHLGFCRLLSLPCISWRRPGGTGK
KKVSEGAEASAHLGSAVVWEPGQHSSREKDTSSSRSALLINKKTLIFSLYHIVTEAEIPY
VEKLEYILVRCIMTSAFYSTGVVVRRTWFSSCAWDAGVGGLILLKHSVNHTFVIYHQTGC
CFERQAKDELKIDNLKSDGKAANLVWPAEFLSVGLGSLGIGNPDVKKTYAINFKGLGRRV
TSGSAELVKHPGEKMAAAAASAPQQLSDEELFSQLRRYGLSPGPVTESTRPVYLKKLKKL
REEEQQQHRSGGRGNKTRNSNNNNTAAATVAAAGPAAAAAAGMGVRPVSGDLSYLRTPGG
LCRISASGPESLLGGPGGASAAPAAGSKVLLGFSSDESDVEASPRDQAGGGGRKDRASLQ
YRGLKAPPAPLAASEVTNSNSAERRKPHSWWGARRPAGPELQTPPGKDGAVEDEEGEGED
GEERDPETEEPLWASRTVNGSRLVPYSCRENYSDSEEEDDDDVASSRQVLKDDSLSRHRP
RRTHSKPLPPLTAKSAGGRLETSVQGGGGLAMNDRAAAAGSLDRSRNLEEAAAAEQGGGC
DQVDSSPVPRYRVNAKKLTPLLPPPLTDMDSTLDSSTGSLLKTNNHIGGGAFSVDSPRIY
SNSLPPSAAVAASSSLRINHANHTGSNHTYLKNTYNKPKLSEPEEELLQQFKREEVSPTG
SFSAHYLSMFLLTAACLFFLILGLTYLGMRGTGVSEDGELSSPVWIGNAHSQENSKQVVK
LVPERDLPMVTSKCAAKSDELKGLSGGTYACYSLLLWVIIVENPFGETFGKIQESEKTLM
MNTLYKLHDRLAQLAGDHECGSSSQRTLSVQEAAAYLK

>gi568815586r:64951352_65221191|GENSCAN_predicted_CDS_6|2634_bp
atgcaggatctgcaggtgctgacctgtagtatgatgagcctggaatgggagagggaggga
gcagctggggatgaagcccaaaatgtagcatgctttgctcttttacttgaccatctaggc
ttctgtaggctcctgagtttgccatgcatatcctggaggagacccggagggacagggaag
aagaaggtatctgagggggctgaagccagtgctcatcttggaagtgcagttgtgtgggaa
ccagggcaacacagctctagagaaaaagataccagctcatctcgttcagctttgcttata
aataaaaagacactgatcttttcattatatcacattgtaacagaagctgaaataccttat
gttgagaaattggaatacattttggtccgctgcattatgacatcggcattttacagcact
ggggtcgttgtgaggaggacttggttttccagttgtgcctgggatgctggagtgggcggg
ttaatcctcctcaaacatagcgttaatcatacatttgttatataccaccaaactggctgt
tgctttgaacgtcaagctaaagacgaactgaaaatagacaacctgaagtcagacgggaaa
gctgccaatctagtctggccagcagaatttctttcagtaggtctaggctccctcggcatt
gggaatccagatgtaaagaaaacttacgccataaacttcaagggtctagggcggcgcgtc
acttccggtagcgcggagcttgtaaaacaccctggagagaaaatggcggcggcagcagct
tcggcgcctcagcagctctcggatgaggagcttttctctcagctccgccgttacggcctg
tctcccggaccagtgacggagagcacccgcccggtctacctcaagaagctgaagaagctt
cgagaggaagagcagcaacagcaccggtcagggggccgcggcaacaagacgcggaacagt
aataacaataacacggcagccgccacggtcgcagccgcgggaccagcggcggcggcggcc
gcggggatgggggtccggccggtctcgggcgacctctcctacttacggactcctgggggc
ctgtgccgaatctcggcctctggcccagagagcctcctgggagggcccgggggcgcctcc
gccgcccccgcggctggcagcaaagtgctgctgggcttcagctcggacgagtcggacgtg
gaggccagtccccgggaccaggccggcggcggcgggaggaaagaccgggcttcgctccag
taccgcgggctcaaagcgccgccggcgcccctggccgccagcgaggtgactaacagcaac
tctgcagagcgaaggaagccccactcgtggtggggggccaggaggccggcgggccccgag
ctgcagaccccgccggggaaagatggagcagtggaggacgaggaaggggagggagaggac
ggtgaggagagggacccggagaccgaggagccgctctgggcgagccggaccgtgaatggc
agccggcttgtcccctacagctgccgggaaaactattcggactcagaggaagaggacgac
gacgacgtggcctccagcagacaggtattaaaggacgactccctttcccggcatcggccc
agacgaacccatagtaagcctctccccccgctgactgctaaatcggccggcggcaggctg
gagacttcagttcagggagggggaggactcgcgatgaatgacagggcggcggctgccggg
agtctagacaggagccgaaacctcgaagaggcggcggccgcggagcagggaggagggtgt
gatcaagtggactccagccccgttcctagataccgtgttaacgctaagaaactgacccct
ctcctgcccccgccacttactgacatggactcaaccttggattcgtcaacaggctccctt
ctgaaaaccaataatcatattggcggtggggccttcagtgtggactcccccaggatttat
tctaacagtctccctcccagtgcggcggtggccgcctctagttcactcaggatcaatcac
gccaatcatacgggctccaatcatacctacctgaaaaacacatacaacaaaccgaagctt
tccgaacccgaagaggaacttctccagcaatttaaacgggaggaggtgtccccaacaggg
agtttcagtgcccactacttgtcgatgtttctcttaactgctgcctgcttatttttccta
atactgggactgacttacctaggaatgagagggacaggagtatctgaggatggagaactc
agcagcccagtgtggatcggaaatgctcatagtcaagagaattcaaaacaagtagttaag
cttgtacctgagagggacctaccaatggtgacctccaaatgcgcagcaaaaagtgatgaa
ctcaaggggctcagtgggggcacttatgcctgttactcattgctcctgtgggttatcatt
gtagaaaacccctttggtgaaacatttggaaaaatacaagaaagtgaaaaaactcttatg
atgaacacattatataagcttcatgatcgattggcacagcttgcaggagatcatgaatgt
ggcagttctagtcaaagaacgctttctgttcaagaggcagctgcgtatttaaaa