GENSCAN 1.0	Date run:  6-Nov-116	Time: 09:18:34

Sequence gi568815596f:6777801_6995939 : 218139 bp : 43.09% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4880   5027  148  1  1   66  115    46 0.298   4.91
 1.02 Intr +   7561   7599   39  2  0  100   73    39 0.181   1.80
 1.03 Term +  25526  25587   62  0  2   25   49   115 0.194  -0.73
 1.04 PlyA +  26280  26285    6                               1.05

 2.06 PlyA -  26996  26991    6                               1.05
 2.05 Term -  33760  33683   78  1  0   97   52    74 0.253   2.46
 2.04 Intr -  43002  42933   70  2  1   93   50    57 0.163   1.58
 2.03 Intr -  43348  43227  122  1  2  120  -23    94 0.311   0.79
 2.02 Intr -  43623  43491  133  2  1   92   72    46 0.740   4.05
 2.01 Init -  56495  56404   92  2  2   61   94    35 0.284   1.36
 2.00 Prom -  58360  58321   40                              -4.96

 3.08 PlyA -  59500  59495    6                               1.05
 3.07 Term -  62878  62763  116  2  2  117   44    74 0.615   4.63
 3.06 Intr -  71563  71479   85  1  1   62   82    21 0.428  -1.71
 3.05 Intr -  72173  72089   85  1  1   97   19    98 0.395   3.62
 3.04 Intr -  73883  73650  234  1  0   73   56   146 0.469   6.70
 3.03 Intr -  83585  83384  202  0  1   57   96   155 0.988  11.54
 3.02 Intr -  85778  85664  115  2  1   46   94   158 0.995  12.22
 3.01 Init -  87896  87222  675  2  0   87   94   950 0.995  88.67
 3.00 Prom -  96074  96035   40                              -6.06

 4.00 Prom +  99942  99981   40                              -4.66
 4.01 Init + 100001 100346  346  1  1   82  105   237 0.565  20.48
 4.02 Intr + 105571 105732  162  2  0   43   54   138 0.604   5.85
 4.03 Intr + 109135 109364  230  2  2   65  106   240 0.994  21.09
 4.04 Intr + 112376 112525  150  1  0   73    1   175 0.322   7.66
 4.05 Intr + 115871 115903   33  1  0  105   73    40 0.479   2.62
 4.06 Term + 117978 118142  165  2  0   54   43   130 0.528   3.02
 4.07 PlyA + 119503 119508    6                               1.05

 5.02 PlyA - 120788 120783    6                               1.05
 5.01 Sngl - 126144 125545  600  0  0   79   49   312 0.994  22.60
 5.00 Prom - 138144 138105   40                              -3.56

 6.10 PlyA - 138343 138338    6                               1.05
 6.09 Term - 143839 143475  365  2  2   91   44   132 0.467   3.83
 6.08 Intr - 145879 145725  155  0  2   47   44    53 0.221  -3.48
 6.07 Intr - 146637 146430  208  1  1   56   32   162 0.322   5.54
 6.06 Intr - 147282 147092  191  2  2   19   70    53 0.235  -4.17
 6.05 Intr - 148924 148769  156  0  0   26   69   121 0.431   3.13
 6.04 Intr - 151199 151014  186  1  0   28   94   118 0.120   5.20
 6.03 Intr - 153367 153259  109  2  1   55   76    39 0.062  -1.26
 6.02 Intr - 158262 158193   70  0  1   95   77    75 0.111   5.85
 6.01 Init - 178676 178515  162  2  0   85   57   101 0.284   6.43
 6.00 Prom - 184331 184292   40                              -3.16

 7.03 PlyA - 184440 184435    6                               1.05
 7.02 Term - 191083 190948  136  0  1   79   49   119 0.973   4.59
 7.01 Init - 196120 196032   89  1  2   78   87    67 0.928   5.72
 7.00 Prom - 201071 201032   40                              -4.66

 8.02 PlyA - 201504 201499    6                              -0.45
 8.01 Sngl - 203892 203602  291  0  0   59   48   166 0.582   5.35
 8.00 Prom - 211742 211703   40                              -3.66

 9.02 PlyA - 211914 211909    6                               1.05
 9.01 Sngl - 217880 217755  126  2  0   71   55   170 0.573   2.88

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:6777801_6995939|GENSCAN_predicted_peptide_1|82_aa
WHVNKFSFIQKEEQVVLNSVPASYHQISQQPLSKVGAAKATLALRAGCPARPSMDCLMPI
RFDHGAEDARNDDHDEEEGEDR

>gi568815596f:6777801_6995939|GENSCAN_predicted_CDS_1|249_bp
tggcacgtgaataaattcagcttcatccaaaaagaggaacaggttgtcctaaattctgtg
cccgcgagttaccatcaaatttcacaacaaccacttagcaaagtgggtgcagcaaaggcc
actttagccctccgggccggatgcccagccaggccctcaatggattgcctgatgcccatc
cgctttgaccatggagctgaagatgccaggaatgatgaccatgatgaggaggagggggag
gatcggtga

>gi568815596f:6777801_6995939|GENSCAN_predicted_peptide_2|164_aa
MSCDDRGRDWTDAAESQEHQNMIITTKRWKRLTGAQVKKEPQTYFLPCPFRPLGADISFA
AVRPSLPRSLELNAGMRAPTLPPTPAAELRFLSTAVRFQPRSDASDVISSSCLWTCSRSV
MVNIDCQLDEIEGCKVLFLPLQSDTSQGKDMGEVAVQPLLSHRG

>gi568815596f:6777801_6995939|GENSCAN_predicted_CDS_2|495_bp
atgtcatgtgatgatagaggtagagattggactgatgcagctgaaagccaggaacaccaa
aatatgatcatcactaccaaaagatggaagaggctcacaggagcccaggtcaagaaggaa
ccacagacgtacttcctcccctgccccttccgtcccctgggagctgacatttcctttgca
gcagtccgtcccagtttacccaggagcctggagctcaacgctgggatgagagcacccacg
cttcctccaactcctgccgcagagctgcgtttcctcagtactgctgtccgcttccagccc
cgctccgacgcatctgacgtcatttcctcgtcttgtctctggacctgctcccggagtgtg
atggttaatattgactgtcagcttgatgaaattgaaggatgcaaagtattgttcctgcct
ttgcagagtgacaccagccagggcaaagacatgggagaggtggccgtgcagcccctgctc
tcacacagaggctga

>gi568815596f:6777801_6995939|GENSCAN_predicted_peptide_3|503_aa
MAFARRLLRGPLSGPLLGRRGVCAGAMAPPRRFVLELPDCTLAHFALGADAPGDADAPDP
RLAALLGPPERSYSLCVPVTPDAGCGARVRAARLHQRLLHQLRRGPFQRCQLLRLLCYCP
GGQAGGAQQGFLLRDPLDDPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQ
DGRRLQVGCAQVVPVPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIPEARAVLDLV
DQCPKQIQKGKFQVVAIEGLDATGKTTVTQSVADSLKAVLLKSPPSCIGQWRKIFDDEPT
IIRRAFYSLGNYIVASEIAKESAKSPVIVDRYWHSTATYAIATEVSGGLQHLPPAHHPVY
QWPEDLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSVFRQKVEMSYQRMENP
GCHVVDASPSREKVLQTSQILEPSVPAEAVYVSWLPKDTPAEPFLGPSWEEPYTILLSTC
SAVKFVGLESWIHHTRVKAWNDP

>gi568815596f:6777801_6995939|GENSCAN_predicted_CDS_3|1512_bp
atggccttcgcccgccggctcctgcgcgggccactgtcggggccgctgctcgggcggcgc
ggggtctgcgctggggccatggctccgccgcgccgcttcgtcctggagcttcccgactgc
accctggctcacttcgccctaggcgccgacgcccccggcgacgcagacgcccccgacccc
cgcctggcggcgctgctggggcccccggagcgcagctactcgctgtgcgtgcccgtgacc
ccggacgccggctgcggggcccgggtccgggcggcgcggctgcaccagcgcctgctgcac
cagctgcgccgcggccccttccagcggtgccagctgctcaggctgctctgctactgcccg
ggcggccaggccggcggcgcacagcaaggcttcctgctgcgcgaccccctggatgaccct
gacacccggcaagcgctgctcgagctgctgggcgcctgtcaggaggcaccacgcccgcac
ttgggcgagttcgaggccgacccgcgcggccagctgtggcagcgcctctgggaggtgcaa
gacggcaggcggctgcaggtgggctgcgcacaggtcgtgcccgtcccggagcccccgctg
cacccggtggtgccagacttgcccagttccgtggtcttcccggaccgggaagccgcccgg
gccgttttggaggagtgtacctcctttattcctgaagcccgggcagtgcttgacctggtc
gaccagtgcccaaaacagatccagaaaggaaagttccaggttgttgccatcgaaggactg
gatgccacgggtaaaaccacggtgacccagtcagtggcagattcacttaaggctgtcctc
ttaaagtcaccaccctcttgcattggccagtggaggaagatctttgatgatgaaccaact
atcattagaagagctttttactctttgggcaattatattgtggcctccgaaatagctaaa
gaatctgccaaatctcctgtgattgtagacaggtactggcacagcacggccacctatgcc
atagccactgaggtgagtgggggtctccagcacctgcccccagcccatcaccctgtgtac
cagtggccagaggacctgctcaaacctgaccttatcctgctgctcactgtgagtcctgag
gagaggttgcagaggctgcagggccggggcatggagaagaccagggaagaagcagaactt
gaggccaacagtgtgtttcgtcaaaaggtagaaatgtcctaccagcggatggagaatcct
ggctgccatgtggttgatgccagcccctccagagaaaaggtcctgcagacgtcccaaatt
ctagagccaagtgttcctgcagaggctgtctatgtgtcctggctgcccaaggacactcct
gcagagccatttttgggtcccagctgggaggaaccttataccatccttctctccacctgc
tcggcagtgaagtttgtgggactggaatcttggattcatcacactcgagtcaaggcctgg
aatgacccctga

>gi568815596f:6777801_6995939|GENSCAN_predicted_peptide_4|361_aa
MWVLTPAAFAGKLLSVFRQPLSSLWRSLVPLFCWLRATFWLLATKRRKQQLVLRGPDETK
EEEEDPPLPTTPTSVNYHFTRQCNYKCGFCFHTAKTSFVLPLEEAKRGLLLLKEAGMEKI
NFSGGEPFLQDRGEYLGKLVRFCKVELRLPSVSIVSNGSLIRERWFQNYGEYLDILAISC
DSFDEEVNVLIGRGQGKKNHVENLQKLRRWCRDYRVAFKINSVINRFNVEEDMTEQIKAL
NPVRWKVFQCLLIEGENCGEDALREAERFVIGDEEFERFLERHKEVSCLVPESNQKMKDS
YLILDEYMRFLNCRKGRKDPSKSILDVGVEEAIKFSGFDEKMFLKRGGKYIWSKADLKLD
W

>gi568815596f:6777801_6995939|GENSCAN_predicted_CDS_4|1086_bp
atgtgggtgcttacacctgctgcttttgctgggaagctcttgagtgtgttcaggcaacct
ctgagctctctgtggaggagcctggtcccgctgttctgctggctgagggcaaccttctgg
ctgctagctaccaagaggagaaagcagcagctggtcctgagagggccagatgagaccaaa
gaggaggaagaggaccctcctctgcccaccaccccaaccagcgtcaactatcacttcact
cgccagtgcaactacaaatgcggcttctgtttccacacagccaaaacatcctttgtgctg
ccccttgaggaagcaaagagaggattgcttttgcttaaggaagctggtatggagaagatc
aacttttcaggtggagagccatttcttcaagaccggggagaatacctgggcaagttggtg
aggttctgcaaagtagagttgcggctgcccagcgtgagcatcgtgagcaatggaagcctg
atccgggagaggtggttccagaattatggtgagtatttggacattctcgctatctcctgt
gacagctttgacgaggaagtcaatgtccttattggccgtggccaaggaaagaagaaccat
gtggaaaaccttcaaaagctgaggaggtggtgtagggattatagagtcgctttcaagata
aattctgtcattaatcgtttcaacgtggaagaggacatgacggaacagatcaaagcacta
aaccctgtccgctggaaagtgttccagtgcctcttaattgagggtgagaattgtggagaa
gatgctctaagagaagcagaaagatttgttattggtgatgaagaatttgaaagattcttg
gagcgccacaaagaagtgtcctgcttggtgcctgaatctaaccagaagatgaaagactcc
taccttattctggatgaatatatgcgctttctgaactgtagaaagggacggaaggaccct
tccaagtccatcctggatgttggtgtagaagaagctataaaattcagtggatttgatgaa
aagatgtttctgaagcgaggaggaaaatacatatggagtaaggctgatctgaagctggat
tggtag

>gi568815596f:6777801_6995939|GENSCAN_predicted_peptide_5|199_aa
MRKNQHKNAENSKNHNASSPPKDHNSPPARKQNWMQNEFDRLTEVDFRRWVTTNSSKLKE
HVLTQCKEAKNLDKRLQELLTRITSLEKNINDLIELKNTAQELHEAYTSINSRIDQVEEM
ISKIEDQLNEIKREDKIREKRMQRNKQSLQEIWDYVKRPNLRLIGVPERDEDNGTKLENT
SGYHPGELPQPSKTGQHSN

>gi568815596f:6777801_6995939|GENSCAN_predicted_CDS_5|600_bp
atgaggaaaaaccagcacaaaaatgctgaaaattccaaaaaccacaatgcctcttctcct
ccaaaggatcacaactccccaccagcaaggaaacaaaactggatgcagaatgagtttgac
agactgacagaggtagacttcagaaggtgggtaacaacaaactcctccaagctaaaggag
catgtcctaacccaatgcaaggaagctaagaaccttgataaaaggttacaggaactgcta
actagaataaccagtttagagaagaacataaatgacctgatagagctgaaaaacacagca
caagaacttcatgaagcatacacaagtatcaatagccgaatcgatcaagtggaagaaatg
atatcaaagattgaagatcaacttaatgaaataaagcgtgaagacaagattagagaaaaa
agaatgcaaaggaacaaacaaagcctccaagaaatatgggattatgtgaaaagaccaaat
ctacgtttaattggtgtacctgaaagagacgaggataatggaaccaagttggaaaacact
tcaggatatcatccaggagaacttccccaacctagcaagacaggccaacattcaaattag

>gi568815596f:6777801_6995939|GENSCAN_predicted_peptide_6|533_aa
MGIYATTYRNDIQKDVWCTDEIRELKAASSGGTSDSLVGLLHNHFRYTPWVQTKAEPPKF
PKGTVKAVKNRNLTDIEALTTTAALGDASGLCRAHCPSSDMNSTQSDLQVHGIREQMDAD
FIPCHPQNAKLLRELTGSEGATQNPQKWQEEDGPVSDHHRRQAATAGDTGNAGKSREKTQ
IHFNKYLLSASYEKPVCRVLEGYKDNQDRTGIPSPHCTHTEPIDGTHRLQSSSAYAIKIR
RVAIEVARKLTEGPRCFLTFSIRQRASPKVSGSPHPSQSKGSLGAHSLCYAYSQDMRSDG
HIQALGSNHSTLCISLHIAGKGHVLCFPCIAQCLGPPSNTATEVSPAVTLDLTYMVSTQP
RSAPCGSIFSSVQCQCQRRASPQSPTLAILQLEGKAAFVMSLQESLGSWHMDDYSLLKVM
GSILICRPLGSKPGFKIDDVCAMLDNIPALCFTLLLCQLGIATYACAAGLCENCIHDASK
ALKIRQIHNEYQPPPPPLVPNTPEMIKYWLTHCMPPRSLLLSGTLHPAYKPAP

>gi568815596f:6777801_6995939|GENSCAN_predicted_CDS_6|1602_bp
atggggatctatgcaacaacctacagaaatgacatccaaaaagatgtgtggtgtacagat
gagattagggagctgaaagctgcttcttctggaggcacctctgactctcttgttgggcta
cttcacaaccatttcaggtacacgccatgggtacagacgaaggccgagccgcccaagttc
cctaaaggaacagtgaaagcagtgaaaaacagaaacctgacagatattgaagcactgacc
acgaccgctgcactaggagatgcttctggactctgccgggcacactgtcccagttctgac
atgaacagtactcagtcagacctgcaggtgcatggtatcagggagcaaatggatgctgac
ttcattccatgtcacccccaaaatgccaagctgctcagggaactgacagggtctgaaggg
gccacgcagaacccccagaagtggcaggaagaggatgggccagtttctgaccatcaccga
aggcaggctgccacagcaggagacactgggaatgcaggaaaaagcagggaaaagacgcag
attcatttcaacaaatatttattgagcgcctcctatgagaagcctgtgtgccgagtgcta
gaggggtacaaagacaaccaggacaggactgggattcccagcccacactgtacccacacc
gaacctattgatggaacacacaggctacaaagctccagtgcatacgctatcaaaattcgc
cgtgtggcaatcgaggtcgccagaaaactcacagaaggacccaggtgcttcctgacattc
tccatccgtcaaagagccagccccaaggtctctggaagcccacacccttcccaaagcaaa
ggctcccttggagcacacagcctgtgttatgcttactcccaggacatgcgctcggatggg
cacattcaggcgcttggttctaaccattccacattatgcatctcccttcacatcgcaggc
aaaggccacgtcctatgcttcccgtgcatcgcacagtgcctcgggccccccagcaacacg
gccacggaagtctcgccagctgttactctggatctcacttacatggtgtctacacaacca
cgttctgctccgtgcggctccatcttctcatctgtgcaatgccagtgtcagaggagagca
tctccacagtcacccacattggcaattttacagctggaaggaaaggcagcatttgtgatg
agccttcaagaatcattaggaagctggcacatggatgactacagcctcctcaaggtcatg
ggatctatccttatctgcaggcctctgggttcaaagccaggcttcaaaattgacgacgtg
tgtgcgatgttggacaacatccctgctctctgcttcactctgctcctctgtcagctaggg
atagcaacatacgcctgtgctgcagggctgtgtgagaactgcatccacgatgcaagcaaa
gccctgaagatcaggcaaatccataatgagtatcaaccacctcctccacctctagtgcca
aacacacctgagatgataaaatactggttgacacactgcatgccaccaaggagcttgctt
ttgtctggaacactgcatccagcttataagcctgctccttag

>gi568815596f:6777801_6995939|GENSCAN_predicted_peptide_7|74_aa
MENISGFVDHGVSVEKTSLMLEHEAARDGTDSMGQPEHTTPENTVGSDHQSCLRRMMPRD
TGNALAKFTVPALP

>gi568815596f:6777801_6995939|GENSCAN_predicted_CDS_7|225_bp
atggaaaatatttcaggctttgtggatcatggggtctctgtagaaaagacctctctgatg
ctggagcacgaagcagccagagacggcacggactccatgggacagcctgaacacacaaca
cctgagaacaccgtgggctctgaccaccagtcatgcttgaggaggatgatgccaagagac
actggcaatgccctcgccaagttcacagtgcctgctttgccctga

>gi568815596f:6777801_6995939|GENSCAN_predicted_peptide_8|96_aa
MWESLELPRDLLNGFDQHADSRIDNEVQAEVVSDGDEEPNGNWSKGHSHYALVKRLVAFS
PCPRDLWNFEIERDNLRYLAEEISKQQSIEMRPGFS

>gi568815596f:6777801_6995939|GENSCAN_predicted_CDS_8|291_bp
atgtgggaaagtttggaacttcctagagacttgttgaatggttttgaccaacatgctgac
agtcgtatcgacaatgaagttcaggctgaggtggtctcagatggagatgaggaacctaat
gggaactggagcaaaggtcactctcactatgctttagtaaagagactggtggcattttcc
ccctgccctagagatctgtggaactttgaaattgagagagataatttaaggtatctggca
gaggaaatttctaagcagcaaagcatcgagatgcgacctggcttttcctga

>gi568815596f:6777801_6995939|GENSCAN_predicted_peptide_9|41_aa
MERLDWLNLLASVVLLCWAFCPRTSDSKFFSFGTPGPSTTD

>gi568815596f:6777801_6995939|GENSCAN_predicted_CDS_9|126_bp
atggaaagactggactggctgaatcttctggcctctgtcgttctcctgtgctgggctttc
tgccctcgaacatcggactccaagttcttcagctttgggactcctggcccttcgaccaca
gactga