GENSCAN 1.0	Date run:  5-Nov-116	Time: 21:01:00

Sequence gi568815586f:80607720_80808957 : 201238 bp : 35.61% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2720   2906  187  1  1   98  110   103 0.979  11.84
 1.02 Intr +   5873   6117  245  0  2   53   47   205 0.546   9.19
 1.03 Intr +   8481   8547   67  2  1   61   83    70 0.582   1.36
 1.04 Intr +  11665  11823  159  2  0   94   54    97 0.955   5.94
 1.05 Intr +  12435  12657  223  1  1   47   89   117 0.471   3.96
 1.06 Intr +  14342  14415   74  2  2   85   82    16 0.414  -1.17
 1.07 Term +  15288  15424  137  1  2   49   38   103 0.248  -1.40
 1.08 PlyA +  15800  15805    6                               1.05

 2.00 Prom +  16117  16156   40                              -1.15
 2.01 Init +  17263  17392  130  0  1   74   49    77 0.714   2.76
 2.02 Intr +  24473  24572  100  0  1  123  116   -24 0.908   2.15
 2.03 Intr +  27226  27354  129  1  0   64   89   189 0.922  15.49
 2.04 Intr +  41869  41950   82  1  1   25   88    43 0.197  -3.28
 2.05 Intr +  45025  45115   91  0  1   94   50    49 0.495   0.35
 2.06 Intr +  50266  50342   77  2  2   96   84   115 0.966  10.22
 2.07 Intr +  61288  61422  135  0  0   84  114    13 0.758   3.34
 2.08 Intr +  61620  61745  126  2  0   74   60    97 0.952   5.46
 2.09 Intr +  62625  62773  149  2  2   65   94    27 0.716  -0.89
 2.10 Intr +  65450  65585  136  2  1   79   99    28 0.723   2.65
 2.11 Intr +  70883  71055  173  1  2   87  107    11 0.094   0.72
 2.12 Intr +  95262  95370  109  0  1  104   61    27 0.055   0.97
 2.13 Intr +  99974 100519  546  1  0   18   75   620 0.005  45.85
 2.14 Intr + 100805 101237  433  1  1  105   17   202 0.080   7.09
 2.15 Intr + 109199 109845  647  0  2   47  103   727 0.300  60.87
 2.16 Term + 138558 138719  162  2  0   51   47   129 0.095   2.05
 2.17 PlyA + 140139 140144    6                               1.05

 3.03 PlyA - 140801 140796    6                               1.05
 3.02 Term - 159976 159791  186  1  0   47   45   132 0.751   1.31
 3.01 Init - 168432 168379   54  0  0   83   64    74 0.406   5.84
 3.00 Prom - 172324 172285   40                              -6.75

 4.05 PlyA - 174431 174426    6                               1.05
 4.04 Term - 178828 178633  196  0  1   60   44   172 0.612   5.90
 4.03 Intr - 180501 180305  197  0  2   72   37   137 0.620   4.29
 4.02 Intr - 180835 180621  215  2  2   66  107    70 0.659   4.21
 4.01 Init - 182501 182354  148  2  1   75   89   129 0.991  12.00
 4.00 Prom - 188123 188084   40                              -6.55

 5.02 PlyA - 188405 188400    6                               1.05
 5.01 Term - 197631 197461  171  0  0  105   41   168 0.996  10.64

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 110639 110714   76  1  1   69   95    47 0.856   1.67
S.002 Term - 190007 189930   78  2  0  140   39    72 0.883   4.28
S.003 Init - 190553 190506   48  2  0   69   76    20 0.842  -0.10


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:80607720_80808957|GENSCAN_predicted_peptide_1|363_aa
VDNDEFNISFIKSNEENKTIEIKDLEIFTRYSVVITAFTGNISAAYVEGKSSAEMIVTTL
ESAPKDPPNNMTFQKIPDEVTKFQLTFLPPSQPNGNIQVYQALVYREDDPTAVQIHNLSI
IQKTNTFVIAMLEGLKGGHTYNISVYAVNSAGAGPKVPMRITMDIKAPARPKTKPTPIYD
ATGKLLVTSTTITIRMPICYYSDDHGPIKNVQVLVTETGAQHDGNVTKWYDAYFNKARPY
FTNEGFPNPPCTEGKTKFSGNEEIYIIGADNACMIPGNEDKICNGPLKPKKQYLFKFRAT
NIMGQFTDSDYSDPVKTLGPQKPQFIRLKELHEQGISGAPLENVRLHVLPRSWRAVAQCI
LNC

>gi568815586f:80607720_80808957|GENSCAN_predicted_CDS_1|1092_bp
gtagataatgatgaatttaatatatccttcatcaagtcaaatgaagaaaataaaaccata
gaaattaaagatttagaaatattcacaaggtattctgtagtgatcactgcatttactggg
aacattagtgctgcatatgtagaagggaagtcaagtgctgaaatgattgttactacttta
gaatcagccccaaaggacccacctaacaacatgacatttcagaagataccagatgaagtt
acaaaatttcaattaacgttccttcctccttctcaacctaatggaaatatccaagtatat
caagctctggtttaccgagaagatgatcctactgctgtccagattcacaacctcagtatt
atacagaaaaccaacacattcgtcattgcaatgctagaaggactaaaaggtggacataca
tacaatatcagtgtttacgcagtcaatagtgctggtgcaggtccaaaggttccgatgaga
ataaccatggatatcaaagctccagcacgaccaaaaaccaaaccaacccctatttatgat
gccacaggaaaactgcttgtgacttcaacaacaattacaatcagaatgccaatatgttac
tacagtgatgatcatggaccaataaaaaatgtacaagtgcttgtgacagaaacaggagct
cagcatgatggaaatgtaacaaagtggtatgatgcatattttaataaagcaaggccatat
tttacaaatgaaggctttcctaaccctccatgtacagaaggaaagacaaagtttagtggc
aatgaagaaatctacatcataggtgctgataatgcatgcatgattcctggcaatgaagac
aaaatttgcaatggaccactgaaaccaaaaaagcaatacttatttaaatttagagctaca
aatattatgggacaatttactgactctgattattctgaccctgttaagactttaggccct
caaaagccccagtttattcgtcttaaagaattgcatgaacagggtatttctggggcacca
cttgaaaatgtaagacttcatgtgttgcccagatcctggcgagctgttgctcagtgtatc
ttgaactgctaa

>gi568815586f:80607720_80808957|GENSCAN_predicted_peptide_2|1074_aa
MQPMSCELDKLATDSKEFLVKEHCQGRNSRRTQKENKVDQFSNGEGLSERTVEIILSVTL
CILSIILLGTAIFAFARIRQKQKEGGTYSPQDAEIIDTKLKLDQLITVADLELKDERLTR
PISKKSFLQHVEELCTNNNLKFQEEFSELPKFLQDLSSTDADLPWNRAKNRFPNIKPYNN
NRVKLIADASVPGSDYINASYISGYLCPNEFIATQGPLPGTVGDFWRMVWETRAKTLVML
TQCFEKGRIRCHQYWPEDNKPVTVFGDIVITKLMEDVQIDWTIRDLKIERHGDCMTVRQC
NFTAWPEHGVPENSAPLIHFVKLVRASRAHDTTPMIVHCSAGVGRTGVFIALDHLTQHIN
DHDFVDIYGLVAELRSERMCMVQNLAQYIFLHQCILDLLSNKGSNQPICFVNYSALQKMD
SLDAMEGKQKQQYMPSLLVYHLRFSEVTQMFCRSKCKTIFTTAFGNLWAQTVCRLGKLQI
ESEAKEENMMMDLFETGSYFFYLDGENVTLQPLEVAEGSPLYPGSDGTLSPCQDQMPPEA
GSDSSGEEHVLAPPGLQPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEA
FEALKRRTVANPNQRLPKVEILRSAISYIERLQDLLHRLDQQEKMQELGVDPFSYRPKQE
NLEGADFLRTCSSQWPSVSDHSRGLVITAKEGKVKGLWAAPEKIREVDRMLGPRGLEARA
GTRPAKRALFARRDQAFPRCQSGLARGAELLRVPSLGAMFVCCFFAQEEQVLIRQPRVAF
DAFLPSWTVFPRRNANSPAWRKWWRSQQASALVNYRSDRLGSSARDLPIGGGARLPFLPI
PLAAVQVHRLPLSRMDVMDGCQFSPSEYFYDGSCIPSPEGEFGDEFVPRVAAFGAHKAEL
QGSDEDEHVRAPTGHHQAGHCLMWACKACKRKSTTMDRRKAATMRERRRLKKVNQAFETL
KRCTTTNPNQRLPKVEILRNAIRYIESLQELLREQVENYYSLPGQSCSEPTSPTSNCSDG
MKERINFSVSLAMPRQNAADSQATAACIAEPKQPTSAKAIMALWAIFAEIESIA

>gi568815586f:80607720_80808957|GENSCAN_predicted_CDS_2|3225_bp
atgcagcccatgagctgcgagttggacaagctcgccacagattcaaaagagttcttagta
aaagaacattgccagggaagaaactctagaagaactcaaaaagaaaacaaagttgatcaa
ttctccaatggggaaggactttcagaaagaaccgtagagatcattctttccgtcactttg
tgtatcctttcaataattctccttggaacagctatttttgcatttgcaagaattcgacag
aagcagaaagaaggtggcacatactctcctcaggatgcagaaattattgacactaaattg
aagctggatcagctcatcacagtggcagacctggaactgaaggacgagagattaacgcgg
ccaataagcaagaaatccttcctgcaacatgttgaagagctttgcacaaacaacaaccta
aagtttcaagaagaattttcggaattaccaaaatttcttcaggatctttcttcaactgat
gctgatctgccttggaatagagcaaaaaaccgcttcccaaacataaaaccatataataat
aacagagtaaagctgatagctgacgctagtgttccaggttcggattatattaatgccagc
tatatttctggttatttatgtccaaatgaatttattgctactcaaggtccactaccagga
acagttggagatttttggagaatggtgtgggaaaccagagcaaaaacattagtaatgcta
acacagtgttttgaaaaaggacggatcagatgccatcagtattggccagaggacaacaag
ccagttactgtctttggagatatagtgattacaaagctaatggaggatgttcaaatagat
tggactatcagggatctgaaaattgaaaggcatggggattgcatgactgttcgacagtgt
aactttactgcctggccagagcatggggttcctgagaacagcgcccctctaattcacttt
gtgaagttggttcgagcaagcagggcacatgacaccacacctatgattgttcactgcagt
gctggagttggaagaactggagtttttattgctctggaccatttaacacaacatataaat
gaccatgattttgtggatatatatggactagtagctgaactgagaagtgaaagaatgtgc
atggtgcagaatctggcacagtatatctttttacaccagtgcattctggatctcttatca
aataagggaagtaatcagcccatctgttttgttaactattcagcacttcagaagatggac
tctttggacgccatggaaggtaaacagaaacaacagtatatgcccagcttactagtttac
cacctacggttctctgaagtgactcagatgttctgtaggtctaagtgcaaaactattttt
accacagcgtttgggaatctctgggcacaaactgtctgccgattaggtaaattacagatc
gagtcagaggccaaggaggagaacatgatgatggacctttttgaaactggctcctatttc
ttctacttggatggggaaaatgttactctgcagccattagaagtggcagaaggctctcct
ttgtatccagggagtgatggtaccttgtccccctgccaggaccaaatgcccccggaagcg
gggagcgacagcagcggagaggaacatgtcctggcgcccccgggcctgcagcctccacac
tgccccggccagtgtctgatctgggcttgcaagacctgcaagagaaaatctgcccccact
gaccggcgaaaagccgccaccctgcgcgaaaggaggaggctaaagaaaatcaacgaggcc
ttcgaggcactgaagcggcgaactgtggccaaccccaaccagaggctgcccaaggtggag
attctgcggagcgccatcagctatattgagcggctgcaggacctgctgcaccggctggat
cagcaggagaagatgcaggagctgggggtggaccccttcagctacagacccaaacaagaa
aatcttgagggtgcggatttcctgcgcacctgcagctcccagtggccaagtgtttccgat
cattccagggggctcgtgataacggctaaggaaggtaaagtaaaagggctctgggccgca
ccagagaaaatccgggaggtggataggatgcttgggccgagagggctcgaagcgagagca
gggacgcgccctgcgaaaagggcgctctttgcgcgccgggaccaggcctttcctcgctgc
caaagcggcctcgcgcggggcgcggagctgcttcgtgttccttctttgggtgctatgttt
gtgtgttgttttttcgctcaggaggagcaagtattgattcgtcagcctcgagtagccttc
gatgcctttcttccatcgtggacagtatttcctcggaggaacgcaaactcccctgcgtgg
aggaagtggtggagaagccaacaggcgtctgcccttgttaattaccggagcgacagacta
gggagctccgcccgggatttgcccatcggcggaggcgccaggctcccgtttctccccatc
cctctcgctgccgtccaggtgcaccgcctgcctctcagcaggatggacgtgatggatggc
tgccagttctcaccttctgagtacttctacgacggctcctgcataccgtcccccgagggt
gaatttggggacgagtttgtgccgcgagtggctgccttcggagcgcacaaagcagagctg
cagggctcagatgaggacgagcacgtgcgagcgcctaccggccaccaccaggctggtcac
tgcctcatgtgggcctgcaaagcctgcaagaggaagtccaccaccatggatcggcggaag
gcagccactatgcgcgagcggaggcgcctgaagaaggtcaaccaggctttcgaaaccctc
aagaggtgtaccacgaccaaccccaaccagaggctgcccaaggtggagatcctcaggaat
gccatccgctacatcgagagcctgcaggagttgctgagagagcaggtggagaactactat
agcctgccgggacagagctgctcggagcccaccagccccacctccaactgctctgatggc
atgaaagaacgaatcaatttttctgtctcacttgcaatgccaaggcagaatgcagctgac
agtcaagctacagcagcttgcattgcagaacccaagcagccgacatctgccaaggccatt
atggcattatgggccatttttgctgagatagaatcaattgcctga

>gi568815586f:80607720_80808957|GENSCAN_predicted_peptide_3|79_aa
MAEGKREAVTFFTWQQGGTTVAVIGLLPDAYSKSIHQDAELAQRKRFNCRVTEQGDGKKP
QIHLPEEFEDKIFKGFGVN

>gi568815586f:80607720_80808957|GENSCAN_predicted_CDS_3|240_bp
atggcagaaggcaaacgagaagcagtcaccttctttacatggcagcaaggcggaactacc
gtagctgtaataggcttattgcctgatgcatacagcaagtcaatacaccaagatgctgag
ctggcgcagagaaagagattcaattgtagggtcactgaacaaggagatgggaagaagcct
caaatccatctccctgaagaatttgaggataaaatttttaagggttttggagtgaactga

>gi568815586f:80607720_80808957|GENSCAN_predicted_peptide_4|251_aa
MQEQWQAFNPIGSGNGHLAGSGAQRAPCWIQRDGSQWRVCDSGKTAVVDGEINSHVAHTK
PVWWSLHTDAHEIWCRDSDWGTFLGRSIPCPPALCFMRKIHLRPQVLRPTSPRNISPISN
LRQRRYVLSVDPKLWCRSRTSEGSLPLVFNHWRDASLIIHPGFGGVRPLRDACLGPSPLA
ASPAFLGSLLQVPEIWPPGQGMPAAQIPPKPRPICVGPHWKSDCPTHLAATPRAPGTLAQ
GSLTPSQIFLV

>gi568815586f:80607720_80808957|GENSCAN_predicted_CDS_4|756_bp
atgcaggaacaatggcaagcctttaacccaatcgggagtggcaatgggcaccttgctgga
tcaggagcacagcgggcaccctgctggatccagagggatggaagtcagtggcgggtctgt
gacagcggcaaaacagcagtggtggatggtgaaataaacagccatgttgctcatacaaag
cctgtttggtggtctcttcacacggacgcgcatgaaatttggtgccgtgactcggattgg
gggaccttccttgggagatcaatcccctgtcctcctgctctttgcttcatgagaaagatc
cacctacgacctcaggtcctcagaccaaccagcccaagaaacatctcaccaatttcaaat
ctgagacaaaggagatacgttttatccgtggacccaaaactctggtgccggtcacggact
agtgaaggcagccttcccttggtgtttaatcattggagggacgcttctctgattattcac
ccaggtttcggaggtgtcagaccactcagggatgcctgccttggtccttcacccttagca
gcaagtcctgcttttctggggagcttgctacaagtgccagaaatctggccaccaggccaa
ggaatgcctgcagcccagattcctcctaagccgcgtcccatctgtgtgggaccccactgg
aaatcggactgtccaactcacctggcagccactcccagagcccctggaactctggcccaa
ggctctctgactccttcccagatcttcttggtttag

>gi568815586f:80607720_80808957|GENSCAN_predicted_peptide_5|56_aa
HYHMHDPDDLIQGIITKTIRLVTKKTKFQGMTPIKSNARNPEFPSRTPDRNNHKAD

>gi568815586f:80607720_80808957|GENSCAN_predicted_CDS_5|171_bp
cattaccacatgcatgatcctgatgatctaatccagggaattattacgaaaactatccgc
ctagtcactaagaaaaccaagttccaggggatgactccaataaaatcgaatgcaaggaac
ccagagtttccaagcagaacaccggacagaaataatcataaagctgactaa