GENSCAN 1.0	Date run:  5-Nov-116	Time: 09:58:02

Sequence gi568815581r:37599076_37844884 : 245809 bp : 44.44% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5770   5811   42  2  0   78   82    54 0.122   2.01
 1.02 Term +  10094  10419  326  0  2   66   41   144 0.686   2.43
 1.03 PlyA +  11916  11921    6                               1.05

 2.16 PlyA -  12952  12947    6                               1.05
 2.15 Term -  15278  15221   58  1  1  112   42    52 0.597   0.16
 2.14 Intr -  19309  19217   93  0  0   79   98    37 0.506   2.88
 2.13 Intr -  21873  21798   76  1  1   72   94   -17 0.480  -4.13
 2.12 Intr -  22202  22052  151  2  1   49   95    42 0.672   0.74
 2.11 Intr -  22445  22323  123  2  0   90  103    32 0.756   5.68
 2.10 Intr -  25359  25269   91  2  1   55   71    77 0.924   2.70
 2.09 Intr -  27023  26820  204  1  0   59   63   146 0.868   7.52
 2.08 Intr -  27785  27713   73  0  1   82   75    11 0.848  -2.34
 2.07 Intr -  29597  29486  112  2  1   83   87    54 0.997   4.75
 2.06 Intr -  31098  30955  144  0  0   61   80    86 0.971   5.58
 2.05 Intr -  33223  33038  186  1  0   67   84   127 0.998  10.09
 2.04 Intr -  36565  36476   90  1  0    5  127    75 0.463   3.29
 2.03 Intr -  42987  42944   44  1  2   90   36    33 0.548  -3.74
 2.02 Intr -  43233  43035  199  0  1   65   92    85 0.635   5.52
 2.01 Init -  44345  44259   87  2  0   87   84    85 0.963   8.70
 2.00 Prom -  70055  70016   40                              -2.96

 3.00 Prom +  72736  72775   40                              -6.26
 3.01 Init +  79569  79704  136  2  1   13  116   121 0.737   7.70
 3.02 Intr +  80474  81200  727  0  1  -32   53   273 0.436   2.29
 3.03 Intr +  81959  81993   35  2  2   50   92    38 0.496  -1.73
 3.04 Intr +  87942  88171  230  1  2   80  115   112 0.469  10.69
 3.05 Term +  90877  90906   30  0  0   98   38    40 0.517  -2.15
 3.06 PlyA +  92400  92405    6                               1.05

 4.13 PlyA -  96690  96685    6                               1.05
 4.12 Term -  97922  97816  107  0  2   78   55    44 0.287  -1.33
 4.11 Intr -  98250  98190   61  0  1  108   61    -7 0.185  -3.09
 4.10 Intr - 100119 100001  119  1  2   88   95    78 0.935   8.68
 4.09 Intr - 102102 101908  195  1  0  126   70   214 0.999  22.79
 4.08 Intr - 105974 105842  133  2  1   93  106    -7 0.572   1.82
 4.07 Intr - 111588 111428  161  1  2  100  101   121 0.977  14.31
 4.06 Intr - 128240 128112  129  0  0   55   77    90 0.221   5.27
 4.05 Intr - 130636 130547   90  2  0   86   62    44 0.232   1.57
 4.04 Intr - 132755 132520  236  1  2  126  115   242 0.999  28.03
 4.03 Intr - 134746 134482  265  2  1  115   92   294 0.994  29.07
 4.02 Intr - 140564 140365  200  1  2   69  105   263 0.530  25.09
 4.01 Init - 145809 145466  344  0  2   67   96   804 0.998  73.81
 4.00 Prom - 149340 149301   40                              -5.46

 5.05 PlyA - 152078 152073    6                               1.05
 5.04 Term - 154097 153919  179  0  2  104   53    82 0.483   4.15
 5.03 Intr - 155729 155672   58  2  1   52   66    56 0.419  -1.74
 5.02 Intr - 156501 156388  114  0  0   39   90    67 0.234   2.64
 5.01 Init - 163773 163684   90  0  0   54   56   151 0.886   6.99
 5.00 Prom - 171467 171428   40                              -1.76

 6.02 PlyA - 174111 174106    6                               1.05
 6.01 Sngl - 184365 183640  726  0  0   60   35   161 0.924   4.25
 6.00 Prom - 185046 185007   40                              -3.26

 7.04 PlyA - 187608 187603    6                               1.05
 7.03 Term - 190968 190947   22  2  1  142   38    27 0.175   0.88
 7.02 Intr - 196257 196185   73  1  1   57  100    47 0.475   1.26
 7.01 Init - 197314 197197  118  1  1   91   46    57 0.697   2.22
 7.00 Prom - 198507 198468   40                              -4.76

 8.04 PlyA - 198930 198925    6                               1.05
 8.03 Term - 226446 226378   69  0  0  104   47    50 0.335   0.44
 8.02 Intr - 229889 229687  203  0  2   95   33   133 0.492   7.50
 8.01 Init - 231412 231361   52  1  1   74   80    27 0.846   1.82

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 179584 179449  136  1  1   70  101    72 0.827   7.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:37599076_37844884|GENSCAN_predicted_peptide_1|122_aa
XNMEALGEEDRGTAAQFQGKGSGLEKTAITAKRPSPPPRRPAGSRPALHTYPPPPADPAP
APAAPPPPEPAPGRSAILLPTCRCLRRRHLISSCQLNTATSGSNTRPHLAADRAMGRGLA
PT

>gi568815581r:37599076_37844884|GENSCAN_predicted_CDS_1|369_bp
nggaatatggaggcccttggagaggaagaccggggaacagctgcccagttccaaggaaaa
ggatcagggctggagaaaactgccataactgccaagcgcccctcgccgcccccgcggagg
ccagcgggctcccgcccggctcttcacacctacccgcctcccccggcggaccccgcgcca
gctcccgcggccccgccgccaccagaaccagctcctggccgcagcgccatcttgctcccg
acctgccgctgccttcgccgccgccaccttatcagcagctgtcagctgaacacagccact
tccgggtcaaacaccaggccccacctcgccgcggaccgggcgatggggcggggcctcgcg
cccacgtga

>gi568815581r:37599076_37844884|GENSCAN_predicted_peptide_2|576_aa
MDVHDLFRRLGAGAKFDTRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNKKSVPGVCG
ASQTHQKPQNGEKKEESLTERKREQSKKKRKTMTSVIKIIQAYGYKSDNKPKAGNDPNVP
HQVNDELYIHYNGILPSNKTINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQN
ILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALI
ISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYL
LKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYD
VEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAVRELVKKGFNPPVLVFV
QSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFK
GVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTEDDKPLLRSKQKKKMIKKPLER
ESISTTPKCFLEKAKDKQKKVTGQNSKKKVALEDKS

>gi568815581r:37599076_37844884|GENSCAN_predicted_CDS_2|1731_bp
atggacgtccacgatctctttcgccggctcggcgcgggggccaaattcgacacgagacgc
ttctcggcagacgcagctcgattccagataggaaaaaggaaatatgactttgattcttcg
gaggtgcttcagggactggacttttttggaaacaagaagtctgtcccaggtgtgtgtgga
gcatcacaaacacatcagaagccccaaaatggagagaaaaaagaagagagcctaactgaa
aggaagagggagcagagcaagaaaaaaaggaagacgatgacttcagttataaaaataata
caggcttatggctacaagtcagacaataagccaaaagctggaaatgacccaaatgtccct
catcaggtgaatgatgaactgtacatccattacaatggaatactacctagtaataaaacg
ataaacttcttgcggaataaacacaaaattcacgtccaaggaaccgatcttcctgaccca
attgctacatttcagcaacttgaccaggaatataaaatcaattctcgactacttcagaac
attctagatgcaggtttccaaatgcctacgccaatccaaatgcaagccatcccagttatg
ctgcatggtcgggaacttctggcttctgctccaactggatctggaaaaacattagctttt
agcattcctattttaatgcagctgaaacaacccgcaaataaaggcttcagagccctgatt
atatcaccaacacgagaacttgccagccagattcacagagagttaataaaaatttctgag
ggaacaggattcagaatacacatgatccacaaagcagcagtggcagccaagaaatttgga
cctaaatcatctaaaaagtttgatattcttgtgactactccaaatcgactaatctattta
ttaaagcaagatccccccggaatcgacctagcaagtgttgagtggcttgtagtagacgaa
tcagataaactgtttgaagatggcaaaactgggttcagagaccagctggcttccattttc
ctggcctgcacatcccacaaggtccgaagagctatgttcagtgcaacttttgcatatgat
gttgaacagtggtgcaaactcaacctggacaatgtcatcagtgtgtccattggagcaagg
aattctgcagtagaaactgtagaacaagagcttctctttgttggatctgagaccggaaaa
cttctggccgtgagagaacttgttaaaaagggtttcaatccacctgttcttgtttttgtt
cagtccattgaaagggctaaagaactttttcatgagctcatatatgaaggtattaatgtg
gatgttattcatgcagagagaacacaacaacagagagataacacagtccacagtttcaga
gcaggaaaaatctgggttctgatttgtacagccttgctagcaagagggattgattttaaa
ggtgtgaacttggtgatcaactatgactttccaactagctcagtggaatatatccacagg
ataggtcgaactggaagagcagggaataagggaaaagcaattacatttttcactgaggat
gataagccattattaagaagcaaacaaaagaaaaagatgattaagaaaccattggaaagg
gagagcattagtacaactccaaaatgtttcttagaaaaagctaaggataaacagaaaaag
gtcactggtcagaacagcaagaagaaagtagctcttgaagacaaaagttaa

>gi568815581r:37599076_37844884|GENSCAN_predicted_peptide_3|385_aa
MYPYKREEEGDLTQKRRRCDHGGGDRSDVATSQELLTANSGWKNQAWYWYQNGDIDQWNR
TEASEIIPQIYNYLIFDKPDKNKKWGKDSLFNKRCWENWLAIRRKLKLDPFLTPYAKINS
RWIKDLHVRPKTIKTLEENLGNTIQDIGMGKDFMSKTPKAMATKAKIDNWDLIKLKSFCT
AKETTIRVNGQPTERGKIFAIYSSDKGLISRIYNELKQIYKKKTNNPINKWMKDMNRHFS
KENIYAANRHMKKCSSSLAIREMQIKTTMRYHLTPVRMAIIKKSGSNRRACFHFDFHHHI
TDSSFRISLFDEGSQHRQYGFLASSSEVPCLPPPGQTGVLDIVGEALWQYCIEGKLGFGL
RLLRVDCLRCQQDVRQALPPSEGFE

>gi568815581r:37599076_37844884|GENSCAN_predicted_CDS_3|1158_bp
atgtatccttataagagggaggaagagggagacttgacacagaagagaaggcgatgtgac
cacggaggcggagataggagtgatgtggccacaagccaagaactgctgacagccaatagt
ggctggaagaatcaagcgtggtactggtaccaaaatggagatatagaccaatggaacaga
acagaggcctcagaaataataccacagatctacaactatctgatctttgacaaacctgac
aaaaacaagaaatggggaaaggattccctattcaacaaacggtgctgggaaaactggcta
gccatacgtagaaagctgaaactggatcccttccttacaccttatgcaaaaattaattca
agatggattaaagacttacatgttagacctaaaaccataaaaaccctagaagaaaaccta
ggcaataccattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaagca
atggcaacaaaagccaaaattgacaattgggatctaattaaactaaagagcttctgcaca
gcaaaagaaactaccatcagagtgaacgggcaacctacagaaagggggaaaatttttgca
atctactcatctgacaaagggctaatatccagaatctacaatgaactcaaacaaatttac
aagaaaaaaacgaacaaccctatcaacaagtggatgaaggatatgaacagacacttctca
aaagaaaacatttatgcagccaacagacacatgaaaaaatgctcatcatcactggccatc
agagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatggcaatc
attaaaaagtcaggaagcaacagacgtgcttgcttccacttcgacttccaccatcatata
acagattcaagttttcgcatcagtttgttcgatgaaggatcacaacatagacagtacggc
tttcttgcttcctcttcggaggttccttgtctcccacctccaggacagacaggagtcctt
gacatcgtgggagaggcattgtggcaatactgcatagaagggaaactgggcttcgggctg
cgcctcctgagagtggattgtctgaggtgccagcaggacgtccgtcaggctttacctcct
agtgaaggctttgaataa

>gi568815581r:37599076_37844884|GENSCAN_predicted_peptide_4|679_aa
MVSKLTSLQQELLSALLSSGVTKEVLVQALEELLPSPNFGVKLETLPLSPGSGAEPDTKP
VFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEEAAEQRAEVDRMLSEDPWR
AAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREIL
RQFNQTVQSSGNMTDKSSQDQLLFLFPEFSQQSHGPGQSDDACSEPTNKKMRRNRFKWGP
ASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWF
ANRRKEEAFRQKLAMDAYSSNQTHSLNPLLSHGSPHHQPSSSPPNKLSALRCVECLPSPG
NMLVMYELRVLPSGRLLSALGQQELSLVIGSMTAHSEAIEQVWSDGLYLPSGDESRERPL
KGVRYSQQGNNEITSSSTISHHGNSAMVTSQSVLQQVSPASLDPGHNLLSPDGKMISVSG
GGLPPVSTLTNIHSLSHHNPQQSQNLIMTPLSGVMAIAQSLNTSQAQSVPVINSVAGSLA
ALQPVQFSQQLHSPHQQPLMQQSPGSHMAQQPFMAAVTQLQNSHMYAHKQEPPQYSHTSR
FPSAMVVTDTSSISTLTNMSSSKQTFQESGNRLISAMMRMIITLRTRVKNKFTCHIPLRK
RSSNKLKEKEEWERHSEVK

>gi568815581r:37599076_37844884|GENSCAN_predicted_CDS_4|2040_bp
atggtgtccaagctcacgtcgctccagcaagaactcctgagcgccctgctgagctccggg
gtcaccaaggaggtgctggttcaggccttggaggagttgctgccatccccgaacttcggg
gtgaagctggagacgctgcccctgtcccctggcagcggggccgagcccgacaccaagccg
gtcttccatactctcaccaacggccacgccaagggccgcttgtccggcgacgagggctcc
gaggacggcgacgactatgacacacctcccatcctcaaggagctgcaggcgctcaacacc
gaggaggcggcggagcagcgggcggaggtggaccggatgctcagtgaggacccttggagg
gctgctaaaatgatcaagggttacatgcagcaacacaacatcccccagagggaggtggtc
gatgtcaccggcctgaaccagtcgcacctctcccagcatctcaacaagggcacccctatg
aagacccagaagcgtgccgctctgtacacctggtacgtcagaaagcaacgagagatcctc
cgacaattcaaccagacagtccagagttctggaaatatgacagacaaaagcagtcaggat
cagctgctgtttctctttccagagttcagtcaacagagccatgggcctgggcagtccgat
gatgcctgctctgagcccaccaacaagaagatgcgccgcaaccggttcaaatgggggccc
gcgtcccagcaaatcttgtaccaggcctacgatcggcaaaagaaccccagcaaggaagag
agagaggccttagtggaggaatgcaacagggcagaatgtttgcagcgaggggtgtccccc
tccaaagcccacggcctgggctccaacttggtcactgaggtccgtgtctacaactggttt
gcaaaccgcaggaaggaggaggcattccggcaaaagctggccatggacgcctatagctcc
aaccagactcacagcctgaaccctctgctctcccacggctccccccaccaccagcccagc
tcctctcctccaaacaagctgtcagcactacgatgtgttgaatgcttaccaagtcctggg
aatatgctagtgatgtacgagctgcgcgtcctgccctctgggaggttactgtctgctctt
ggccagcaggagctgtccctggttataggctccatgacagcccattctgaagccattgag
caggtctggagtgatggcctctacctcccttctggagatgaatcaagagaaaggccccta
aaaggagtgcgctacagccagcagggaaacaatgagatcacttcctcctcaacaatcagt
caccatggcaacagcgccatggtgaccagccagtcggttttacagcaagtctccccagcc
agcctggacccaggccacaatctcctctcacctgatggtaaaatgatctcagtctcagga
ggaggtttgcccccagtcagcaccttgacgaatatccacagcctctcccaccataatccc
cagcaatctcaaaacctcatcatgacacccctctctggagtcatggcaattgcacaaagc
ctcaacacctcccaagcacagagtgtccctgtcatcaacagtgtggccggcagcctggca
gccctgcagcccgtccagttctcccagcagctgcacagccctcaccagcagcccctcatg
cagcagagcccaggcagccacatggcccagcagcccttcatggcagctgtgactcagctg
cagaactcacacatgtacgcacacaagcaggaacccccccagtattcccacacctcccgg
tttccatctgcaatggtggtcacagataccagcagcatcagtacactcaccaacatgtct
tcaagtaaacagacatttcaggagtctggcaatagactcatttctgcgatgatgaggatg
attattacactcagaacaagagtaaaaaataagttcacttgccatattccactcaggaaa
cgttcttccaacaagttgaaagagaaggaggaatgggaaaggcacagtgaagtaaaatga

>gi568815581r:37599076_37844884|GENSCAN_predicted_peptide_5|146_aa
MLLLQLLLPLPPLLLLLFSVSLCCPGWSEVGMEVKPGLPSHNSLPQPMADGHPPRALQPW
HKDTLGPEGSCKVWFAWKELFQVEEAADKETEVQSVSLPKVTSEKQQRQVSTQIGLTPSP
MLIPCGTCLSAGTENQGKLYLNLNPI

>gi568815581r:37599076_37844884|GENSCAN_predicted_CDS_5|441_bp
atgctgttgctgcagctgctgctgccgctgccgccgctgctgctcctgcttttttcagtc
tcactctgttgcccaggctggagtgaagtgggcatggaagtcaaaccaggtctcccttcc
cacaactcgctgccccagcccatggcagatggacatcccccaagggcattacaaccatgg
cacaaggacacccttggtccagagggaagttgcaaagtctggtttgcctggaaggagctc
ttccaggtggaggaagcggcagataaagaaactgaagttcagagtgtcagcttacccaag
gtcacatctgaaaagcagcagagacaggtttcaacccagattgggctgactccaagcccc
atgctgattccctgtggcacctgcctctcggctggtacagaaaaccagggaaagctgtat
ttgaatctcaacccaatctga

>gi568815581r:37599076_37844884|GENSCAN_predicted_peptide_6|241_aa
MDKFLDTYTLPRLNQEEVESLNRPITSSEIEAIINRLPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQTIEKEGLLSNLFYEASAILIPKPGRDTTKKENFRPISLINIDAKILNKILA
SRIQQHIKKFIHHDQVSFIPRMQGWFNICKSINIIHHINRTKDKNHMIISIDTEKAFHKI
QHPLVLKTLNKLRIDGTYIKTIRTIYDKPTANIILNGQKLEAFSLKTSTRQGCPLSPSYS
T

>gi568815581r:37599076_37844884|GENSCAN_predicted_CDS_6|726_bp
atggataagttcctggacacatacactctcccaagactgaaccaggaagaagttgaatcc
ctgaatagaccaataacaagttctgaaattgaggcaataattaatagactaccaaccaaa
aaaagcccaggaccagacggatttacagctgaattctaccagaggtacaaagaggagctg
gtaccatttcttctgaaactattccaaacaattgaaaaggagggactcctctcaaactta
ttttatgaggccagtgccattctgataccaaaacctggcagagatacaacaaaaaaagaa
aacttcaggccaatatccctcataaacattgatgcaaaaatcctcaataaaatactggca
agccgaatccagcagcacatcaaaaagtttatccaccacgatcaagtcagcttcatccct
aggatgcaaggctggttcaacatatgcaaatcaataaacataattcatcacataaacaga
actaaagacaaaaaccacatgattatctcaatagatacagaaaaggccttccataaaatt
caacatcccttagtgttaaaaactctcaataagctacgtattgatgggacatacatcaag
acaataagaaccatttatgacaaacccacagccaatatcatactgaatgggcaaaagttg
gaagcattctccttgaaaaccagcacaagacaaggatgccctctctcaccctcctattca
acatag

>gi568815581r:37599076_37844884|GENSCAN_predicted_peptide_7|70_aa
MQRGQLPRDPPMQGALQPPNPTLKHQVSAARLSSRSSPRVEFYLAAPAKDNSSDNCAFLE
RRVRLGGDRQ

>gi568815581r:37599076_37844884|GENSCAN_predicted_CDS_7|213_bp
atgcagagaggccagctgcccagggacccacccatgcaaggagctctgcagcctccgaat
ccaaccctgaagcaccaagtgtctgcagcccggctgagctctcgcagcagcccacgagtt
gagttttatctagcagcacctgcaaaagataactcctcggataactgtgcttttctagaa
aggcgagtaaggcttggtggagaccgacagtaa

>gi568815581r:37599076_37844884|GENSCAN_predicted_peptide_8|107_aa
MNASPDKTEMEENQTLKKAEQPGDNGRKEALVSSGTVLLTEQGTALAGDVYADFGVWIRR
GSWLADGAQAYGKQDDLRVKNKQPWLDCGLLRSHGHQGSIAMDFFDK

>gi568815581r:37599076_37844884|GENSCAN_predicted_CDS_8|324_bp
atgaatgcctccccagataagacagaaatggaagaaaaccaaactttgaaaaaagcagag
caaccaggagacaacggaaggaaagaggccctggtctcctcgggaactgtgttactgaca
gaacaaggaacagctttggctggagatgtttatgctgactttggagtatggatcagaaga
gggtcctggcttgctgatggagctcaggcctatggaaaacaggatgatcttagagttaaa
aacaaacaaccctggttagactgtgggctcctgaggtcccatggccatcagggaagtatt
gccatggacttctttgataaatag