GENSCAN 1.0	Date run:  6-Nov-116	Time: 00:09:26

Sequence gi568815581f:60500415_60763549 : 263135 bp : 42.06% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -   1286   1281    6                               1.05
 1.06 Term -  12762  12622  141  0  0   63   43   147 0.336   4.65
 1.05 Intr -  25804  25380  425  2  2   72   91   378 0.147  29.16
 1.04 Intr -  28762  28629  134  0  2   77   71    84 0.462   4.97
 1.03 Intr -  56775  56696   80  0  2  115   27    67 0.010   0.73
 1.02 Intr -  57790  57683  108  1  0  105   92    -8 0.014   0.86
 1.01 Init -  60361  60251  111  1  0   40  105    99 0.297   6.93
 1.00 Prom -  62502  62463   40                              -5.25

 2.04 PlyA -  62597  62592    6                               1.05
 2.03 Term -  65212  65018  195  1  0   42   40   186 0.628   5.63
 2.02 Intr -  68187  68091   97  2  1   69   84    37 0.165   0.49
 2.01 Init -  84730  84696   35  1  2  113   89     8 0.342   2.92
 2.00 Prom -  88788  88749   40                              -5.65

 3.00 Prom +  97582  97621   40                              -7.55
 3.01 Init + 100001 100472  472  1  1  107  106   481 0.710  46.03
 3.02 Intr + 113249 113323   75  0  0   29   45   121 0.060   0.47
 3.03 Term + 114255 114529  275  1  2  -32   45   313 0.221   9.65
 3.04 PlyA + 115105 115110    6                               1.05

 4.00 Prom + 116958 116997   40                              -5.95
 4.01 Init + 123124 123335  212  0  2   59   77   297 0.921  24.00
 4.02 Intr + 133439 133563  125  2  2   64  111   148 0.943  14.01
 4.03 Intr + 147478 147668  191  2  2  109   81   109 0.923  10.68
 4.04 Intr + 156185 156427  243  1  0   69   71   182 0.716  11.37
 4.05 Term + 162581 163138  558  1  0   76   44   385 0.998  26.26
 4.06 PlyA + 164041 164046    6                               1.05

 5.00 Prom + 173161 173200   40                              -6.15
 5.01 Init + 174245 174434  190  1  1   42   70   116 0.302   4.42
 5.02 Intr + 179039 179126   88  0  1   68   87   107 0.823   6.71
 5.03 Intr + 183568 183622   55  1  1   89  111    41 0.895   4.56
 5.04 Intr + 189272 189347   76  1  1   78   56    47 0.094  -1.33
 5.05 Intr + 208805 208911  107  0  2   68   95    92 0.923   6.91
 5.06 Term + 212625 212765  141  2  0   29   54   102 0.611  -2.15
 5.07 PlyA + 215864 215869    6                               1.05

 6.02 PlyA - 216445 216440    6                               1.05
 6.01 Sngl - 227374 226751  624  1  0   68   37   450 0.814  33.84
 6.00 Prom - 236092 236053   40                              -3.55

 7.04 PlyA - 236316 236311    6                               1.05
 7.03 Term - 237960 237756  205  2  1   15   41   186 0.606   2.46
 7.02 Intr - 239404 239310   95  1  2  -14   87    82 0.526  -4.26
 7.01 Init - 240868 240674  195  1  0   47   97   115 0.732   7.28
 7.00 Prom - 261276 261237   40                              -3.95

 8.03 PlyA - 261821 261816    6                               1.05
 8.02 Term - 262813 262581  233  2  2   67   41   150 0.492   3.85
 8.01 Init - 263042 262964   79  2  1   42   63    98 0.576   3.97

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 206901 206952   52  2  1   86   68    64 0.874   3.57


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:60500415_60763549|GENSCAN_predicted_peptide_1|332_aa
MAGHPVFFLLIHLLPLDFSMGWTQTPGSNNWRRGWKERQAVAMFPGLTSNSRAQGILLCK
EHGCNAARQAWAKGLSLSASSMATHHTQGETGQQNAAALGPQGVLPDFHGCFLKAHGLSS
QCVVNAVWAETQPSGQKALLWTRAEISAGTEPGFLSNRDCDAFGLAGRCFLSHFLLGPAS
AAAVPQFAPGGGRAAVPSAVRPRGCHRPSESSGAAEGFATEGGGGLREEEAEEAEEEGRK
MAAVELEWIPETLYNTAISAVVDNYIRSRRDIRSLPENIQFDVYYKADEVTVANTEILLD
TFRARWVSGAAQHQGWDINTQVLLEPVIAPTE

>gi568815581f:60500415_60763549|GENSCAN_predicted_CDS_1|999_bp
atggccggccacccagtgttctttctgctcatccacctactgcccttagacttcagcatg
ggctggacccagaccccaggatctaacaactggcgacgaggatggaaggagagacaggct
gttgctatgttccctgggctgacctcaaactcccgggctcaagggatcctcctgtgtaag
gaacatggctgcaatgcagcgaggcaggcatgggccaagggtcttagcttgtcagccagt
tccatggccactcatcatactcagggtgaaactggccagcagaatgctgcagccttgggg
ccacagggagtactgccagacttccacggatgtttccttaaggcccacggcctctcaagt
cagtgtgtggtgaatgctgtctgggcagagactcaaccgtcagggcagaaggctctactc
tggaccagggcagagatcagcgctgggacggaacccgggttcctctcgaaccgggattgt
gacgcttttggcctggctggccgctgttttctgtcccactttttactcgggcctgcgtcc
gctgccgccgtccctcagtttgcccccggaggaggcagggcggccgtgccttctgccgtg
cgcccgcgtggctgccaccgcccctccgaatcctccggggccgcagaggggttcgctacg
gagggaggtgggggccttcgggaggaggaggcggaggaggcggaggaggagggaaggaag
atggcggccgtggaactagagtggatcccagagactctctataacaccgccatctccgct
gtcgtggacaactacatccgctcccgccgagacatccgctccttgcccgagaacatccag
tttgatgtttactacaaggctgatgaggttactgtagcaaatactgaaattcttctggac
accttccgagctcgctgggtttcaggcgctgcacagcatcaggggtgggacatcaacacc
caagtactgctggaacctgttatagcacccacggaatag

>gi568815581f:60500415_60763549|GENSCAN_predicted_peptide_2|108_aa
MANIVKCCREVKLYSGMIKVHCILNLLGSSDPPTSACQAAGGPLIQETFWEPQLLVVIDS
NNPTTTTGLSQRQLMLILSTIALCNTDSPLRYGDIAIPCNNKGAYLRV

>gi568815581f:60500415_60763549|GENSCAN_predicted_CDS_2|327_bp
atggccaatatcgtcaaatgctgtagagaggtcaagttgtacagtggcatgatcaaagtt
cactgcatccttaacctcctgggctcaagtgatcctcccacatcagcgtgccaagcagct
gggggaccactgatccaggaaaccttctgggagccacagcttctggtggttattgattcc
aacaatccaacaacgaccaccggcctgtcacagaggcaacttatgttaatcttatctacc
atcgctctgtgcaacacagattctcctttgcgctatggggacattgccatcccatgcaac
aacaaaggagcttacttacgggtttga

>gi568815581f:60500415_60763549|GENSCAN_predicted_peptide_3|273_aa
MAGLYSLGVSVFSDQGGRKYMEDVTQIVVEPEPTAEEKPSPRRSLSQPLPPRPSPAALPG
GEVSGKGPAVAAREARDPLPDAGASPAPSRCCRRRSSVAFFAVCDGHGGREAAQFAREHL
WGFIKKQKGFTSSEPAKVCAAIRKGFLACHLAMWKKLARVPGGHGLRRPCTRSGQLALLA
AGTVTLTAKVCSFTPEARETTNPPEGTNNSRRAALKAVTLTGKVCSFIPEASETTNPPEG
RNSEHIRTSEGTNSGHTAFKNCNTRGKGLRFHS

>gi568815581f:60500415_60763549|GENSCAN_predicted_CDS_3|822_bp
atggcggggctgtactcgctgggagtgagcgtcttctccgaccagggcgggaggaagtac
atggaggacgttactcaaatcgttgtggagcccgaaccgacggctgaagaaaagccctcg
ccgcggcggtcgctgtctcagccgttgcctccgcggccgtcgccggccgcccttcccggc
ggcgaagtctcggggaaaggcccagcggtggcagcccgagaggctcgcgaccctctcccg
gacgccggggcctcgccggcacctagccgctgctgccgccgccgttcctccgtggccttt
ttcgccgtgtgcgacgggcacggcgggcgggaggcggcacagtttgcccgggagcacttg
tggggtttcatcaagaagcagaagggtttcacctcgtccgagccggctaaggtttgcgct
gccatccgcaaaggctttctcgcttgtcaccttgccatgtggaagaaactggcgcgagtt
ccaggtgggcatgggctccgcaggccctgcactcggagcggccagctggcgctgctggcc
gcaggcactgtaacactcactgcgaaggtctgcagcttcactcctgaagccagggagacc
accaacccaccagaaggaacgaacaactccagacgcgcagcattaaaagctgtaacactc
accgggaaagtctgcagcttcattcctgaagccagcgagaccacgaacccaccagaagga
agaaactccgaacacatccgaacatcagaaggaacaaattctggacacactgcctttaag
aactgtaacactcgtggcaagggtctgcggtttcattcttga

>gi568815581f:60500415_60763549|GENSCAN_predicted_peptide_4|442_aa
MTGLPSTSGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVRAVEVTQDHKPELPK
ERERIEGLGGSVMNKSGVNRVVWKRPRLTHNGPVRRSTVIDQIPFLAVARALGDLWSYDF
FSGEFVVSPEPDTSVHTLDPQKHKYIILGSDGLWNMIPPQDAISMCQDQEEKKYLMGEHG
QSCAKMLVNRALGRWRQRMLRADNTSAIVICISPEVDNQGNFTNEDELYLNLTDSPSYNS
QETCVMTPSPCSTPPVKSLEEDPWPRVNSKDHIPALVRSNAFSENFLEVSAEIARENVQG
VVIPSKDPEPLEENCAKALTLRIHDSLNNSLPIGLVPTNSTNTVMDQKNLKMSTPGQMKA
QEIERTPPTNFKRTLEESNSGPLMKKHRRNGLSRSSGAQPASLPTTSQRKNSVKLTMRRR
LRGQKKIGNPLLHQHRKTVCVC

>gi568815581f:60500415_60763549|GENSCAN_predicted_CDS_4|1329_bp
atgacgggtcttcctagcacatcagggacaactgccagtgtggtcatcattcggggcatg
aagatgtatgtagctcacgtaggtgactcaggggtggttcttggaattcaggatgacccg
aaggatgactttgtcagagctgtggaggtgacacaggaccataagccagaacttcccaag
gaaagagaacgaatcgaaggacttggtgggagtgtaatgaacaagtctggggtgaatcgt
gtagtttggaaacgacctcgactcactcacaatggacctgttagaaggagcacagttatt
gaccagattccttttctggcagtagcaagagcacttggtgatttgtggagctatgatttc
ttcagtggtgaatttgtggtgtcacctgaaccagacacaagtgtccacactcttgaccct
cagaagcacaagtatattatattggggagtgatggactttggaatatgattccaccacaa
gatgccatctcaatgtgccaggaccaagaggagaaaaaatacctgatgggtgagcatgga
caatcttgtgccaaaatgcttgtgaatcgagcattgggccgctggaggcagcgtatgctc
cgagcagataacactagtgccatagtaatctgcatctctccagaagtggacaatcaggga
aactttaccaatgaagatgagttatacctgaacctgactgacagcccttcctataatagt
caagaaacctgtgtgatgactccttccccatgttctacaccaccagtcaagtcactggag
gaggatccatggccaagggtgaattctaaggaccatatacctgccctggttcgtagcaat
gccttctcagagaattttttagaggtttcagctgagatagctcgagagaatgtccaaggt
gtagtcataccctcaaaagatccagaaccacttgaagaaaattgcgctaaagccctgact
ttaaggatacatgattctttgaataatagccttccaattggccttgtgcctactaattca
acaaacactgtcatggaccaaaaaaatttgaagatgtcaactcctggccaaatgaaagcc
caagaaattgaaagaacccctccaacaaactttaaaaggacattagaagagtccaattct
ggccccctgatgaagaagcatagacgaaatggcttaagtcgaagtagtggtgctcagcct
gcaagtctccccacaacctcacagcgaaagaactctgttaaactcaccatgcgacgcaga
cttaggggccagaagaaaattggaaatcctttacttcatcaacacaggaaaactgtttgt
gtttgctga

>gi568815581f:60500415_60763549|GENSCAN_predicted_peptide_5|218_aa
MFRFCPSTVPFLQSSPRLAFRLLLIGTFYRALIGAFYRALIGAFYRVLIGAFYNPLASYR
ALIGFMNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTE
EKEKIVWVRFENADLNDTSRNLEFHEIHSTGNEPPLLIMIGYSDGMQVWSIPKFQKGERE
AIVFLLEELQERELERVPPCACEGEAGEHQKVLGSEDF

>gi568815581f:60500415_60763549|GENSCAN_predicted_CDS_5|657_bp
atgttccgtttctgtcctagcacagtgccctttcttcaatcttccccacgattggctttt
agactcctgctgattggtacgttttacagagcactgattggtgcattttacagagcactg
attggtgcattttacagagtgctgattggtgcattttacaatcctcttgctagctacaga
gcgttgattggttttatgaatgaagctatggctacagattccccaagaagacccagtcgt
tgtactggtggagttgtggttcgcccccaggctgtcacagagcagtcctacatggaaagt
gttgtgacttttctgcaggatgttgtgccacaggcttacagtggaacacctctaacagaa
gaaaaggagaaaatagtctgggtcagatttgaaaatgcagatttaaatgatacatcaaga
aatctggaatttcatgaaatacatagtactgggaatgaaccgcctttgttgattatgatt
ggctacagtgatggaatgcaggtctggagcatccctaaatttcagaaaggggagagggag
gcaattgtgttccttctagaagagcttcaggaaagggaacttgagagagtccctccttgt
gcttgtgagggagaagcaggagaacaccagaaagtccttggttctgaggacttctga

>gi568815581f:60500415_60763549|GENSCAN_predicted_peptide_6|207_aa
MNPTVSYGLWVTIIYQCMFMDCNNFTTVVLGVLTVGEVVHDVEAGGIRDLRILSTQFCRE
PKTALKNKVCFFLSCQARALRGESLRCHFSFSSHRRNSPAAKMVNVPKTRRTFCKKCGKH
QPHKVTQYKSKDSLYAQGKRRYDRKQSGYGGQRRPVFLKKAKTTKKTVLRPECVEPNCRS
KRMVVIQRCKHFEPGGDKKRKGQEIQF

>gi568815581f:60500415_60763549|GENSCAN_predicted_CDS_6|624_bp
atgaatcctactgtaagctatggactgtgggtaacaataatatatcaatgtatgttcatg
gattgtaacaattttaccactgtggtgctgggggtgttgacagttggggaggttgtgcac
gatgtggaggcaggaggtatacgggacctccgtatactttctactcagttttgccgtgaa
cctaaaactgcccttaaaaataaagtctgttttttcctttcctgtcaggcgagagctttg
cgaggcgagagtctcagatgccatttctcgttttcatcacatagacggaacagccctgct
gcaaagatggtcaacgtacctaaaacccgaagaaccttctgtaagaagtgtggcaagcat
cagcctcacaaagtgacacagtataagagcaaggattccttgtatgcccagggaaagagg
cgctatgatcggaagcagagtggctatggtgggcagagaaggccagttttcctgaagaag
gctaagaccacaaagaagactgtgctaaggccagaatgtgttgagcctaactgcagatcc
aagaggatggtggtcattcagagatgtaagcattttgaaccgggaggagataagaagaga
aagggccaagagatccagttctaa

>gi568815581f:60500415_60763549|GENSCAN_predicted_peptide_7|164_aa
MQLRRLHLDLTTGKKLNSSSYIRQKNDVIEQTAAPKIGETNRQIQRITIYQGRNPQARTS
GLSTKTKTFLDKQEPREFVAGRPALQEMLKEVLQGKSTKIHEAKIDKEKEMNPLLELETL
TPLYLKRTDPAARKAQKDIVELNSTISQLDITDIYKLLLTTVAQ

>gi568815581f:60500415_60763549|GENSCAN_predicted_CDS_7|495_bp
atgcagctcagaagacttcacttagatctgaccacaggtaaaaagctgaacagctcttct
tacatccgtcagaaaaatgacgtcatagagcaaactgctgccccaaaaattggagagaca
aacaggcagatacagagaatcacaatttaccagggcagaaatccacaagcgagaacctca
ggactcagtaccaagacaaaaactttcttggacaaacaggaaccgagggaatttgttgct
ggtagacctgccttgcaagaaatgttaaaagaagttctacagggaaaaagcaccaaaata
catgaagcaaaaattgacaaagagaaagagatgaatccactattagagttagagactcta
acacccctctatctgaaacgaacagatccagcagccagaaaagcacaaaaggacatagtt
gaactcaacagcaccatcagtcaactggatataactgacatctataaactacttcttaca
acagtagcacaataa

>gi568815581f:60500415_60763549|GENSCAN_predicted_peptide_8|103_aa
MIISIDAEKAFDKIRQHFMLKTLNKLVLEVLARAIRQEKEIKGIQLGKEEVKLSLLADDM
IAYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTSNT

>gi568815581f:60500415_60763549|GENSCAN_predicted_CDS_8|312_bp
atgattatctcaatagatgcagaaaaggccttcgacaaaattcgacagcacttcatgcta
aaaactctcaataaactagtgttggaagttctggccagggcaatcaggcaagagaaagaa
ataaagggtattcaattaggaaaagaggaagtcaaattgtccctgcttgcagatgacatg
attgcatatttagaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaac
ttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattcttatacacc
agtaacacataa