Result of FASTA (ccds) for pF1KB6908
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6908, 224 aa
  1>>>pF1KB6908 224 - 224 aa - 224 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7110+/-0.000791; mu= 12.4092+/- 0.047
 mean_var=75.1812+/-14.776, 0's: 0 Z-trim(108.0): 31  B-trim: 0 in 0/52
 Lambda= 0.147918
 statistics sampled from 9869 (9900) to 9869 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.696), E-opt: 0.2 (0.304), width:  16
 Scan time:  1.880

The best scores are:                                      opt bits E(32554)
CCDS9683.1 FKBP3 gene_id:2287|Hs108|chr14          ( 224) 1469 322.4 1.4e-88
CCDS8063.1 FKBP2 gene_id:2286|Hs108|chr11          ( 142)  305 73.9 5.9e-14
CCDS13014.1 FKBP1A gene_id:2280|Hs108|chr20        ( 108)  291 70.9 3.7e-13
CCDS8512.1 FKBP4 gene_id:2288|Hs108|chr12          ( 459)  287 70.3 2.3e-12
CCDS1706.1 FKBP1B gene_id:2281|Hs108|chr2          ( 108)  277 67.9 2.9e-12
CCDS54996.1 FKBP5 gene_id:2289|Hs108|chr6          ( 268)  266 65.7 3.2e-11
CCDS4808.1 FKBP5 gene_id:2289|Hs108|chr6           ( 457)  266 65.8   5e-11


>>CCDS9683.1 FKBP3 gene_id:2287|Hs108|chr14               (224 aa)
 initn: 1469 init1: 1469 opt: 1469  Z-score: 1703.5  bits: 322.4 E(32554): 1.4e-88
Smith-Waterman score: 1469; 100.0% identity (100.0% similar) in 224 aa overlap (1-224:1-224)

               10        20        30        40        50        60
pF1KB6 MAAAVPQRAWTVEQLRSEQLPKKDIIKFLQEHGSDSFLAEHKLLGNIKNVAKTANKDHLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 MAAAVPQRAWTVEQLRSEQLPKKDIIKFLQEHGSDSFLAEHKLLGNIKNVAKTANKDHLV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 TAYNHLFETKRFKGTESISKVSEQVKNVKLNEDKPKETKSEETLDEGPPKYTKSVLKKGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 TAYNHLFETKRFKGTESISKVSEQVKNVKLNEDKPKETKSEETLDEGPPKYTKSVLKKGD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 KTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 KTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALL
              130       140       150       160       170       180

              190       200       210       220    
pF1KB6 TMSKGEKARLEIEPEWAYGKKGQPDAKIPPNAKLTFEVELVDID
       ::::::::::::::::::::::::::::::::::::::::::::
CCDS96 TMSKGEKARLEIEPEWAYGKKGQPDAKIPPNAKLTFEVELVDID
              190       200       210       220    

>>CCDS8063.1 FKBP2 gene_id:2286|Hs108|chr11               (142 aa)
 initn: 264 init1: 128 opt: 305  Z-score: 364.1  bits: 73.9 E(32554): 5.9e-14
Smith-Waterman score: 305; 44.2% identity (68.3% similar) in 120 aa overlap (106-224:26-137)

          80        90       100       110       120        130    
pF1KB6 ESISKVSEQVKNVKLNEDKPKETKSEETLDEGPPKYTKSVLKKGDKTNFP-KKGDVVHCW
                                     ::  :   .: :. :.  .  .::::.:  
CCDS80      MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMH
                    10        20        30        40        50     

          140       150       160       170       180       190    
pF1KB6 YTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEP
       ::: :.::: ::...  .       .:. :..:.:.::.:::..:: : .::: .: :  
CCDS80 YTGKLEDGTEFDSSLPQN-------QPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPS
          60        70               80        90       100        

          200       210       220         
pF1KB6 EWAYGKKGQPDAKIPPNAKLTFEVELVDID     
       : .::..: :  ::: .: :.:::::. :.     
CCDS80 ELGYGERGAPP-KIPGGATLVFEVELLKIERRTEL
      110        120       130       140  

>>CCDS13014.1 FKBP1A gene_id:2280|Hs108|chr20             (108 aa)
 initn: 298 init1: 164 opt: 291  Z-score: 349.7  bits: 70.9 E(32554): 3.7e-13
Smith-Waterman score: 292; 44.1% identity (70.3% similar) in 111 aa overlap (116-224:8-108)

          90       100       110       120         130       140   
pF1KB6 KNVKLNEDKPKETKSEETLDEGPPKYTKSVLKKGDKTNFPKKGD--VVHCWYTGTLQDGT
                                     .. ::  .:::.:.  :::  ::: :.:: 
CCDS13                        MGVQVETISPGDGRTFPKRGQTCVVH--YTGMLEDGK
                                      10        20          30     

           150       160       170       180       190       200   
pF1KB6 VFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQ
        ::..      . .: ::..: .:  .:::::.:..  :: :..:.: : :..:::  :.
CCDS13 KFDSS------RDRN-KPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGH
          40               50        60        70        80        

           210       220    
pF1KB6 PDAKIPPNAKLTFEVELVDID
       :   :::.: :.:.:::. ..
CCDS13 PGI-IPPHATLVFDVELLKLE
       90        100        

>>CCDS8512.1 FKBP4 gene_id:2288|Hs108|chr12               (459 aa)
 initn: 296 init1: 139 opt: 287  Z-score: 335.6  bits: 70.3 E(32554): 2.3e-12
Smith-Waterman score: 287; 45.8% identity (66.9% similar) in 118 aa overlap (109-222:27-136)

       80        90       100       110           120       130    
pF1KB6 SKVSEQVKNVKLNEDKPKETKSEETLDEGPPKYTKSVLK----KGDKTNFPKKGDVVHCW
                                     ::  ..:::    .:  :..:  :: :   
CCDS85     MTAEEMKATESGAQSAPLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVH
                   10        20        30        40        50      

          140       150       160       170       180       190    
pF1KB6 YTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEP
       ::: : ::: ::....   .: :    .:: .: :.::..:: :. ::. ::  ..  .:
CCDS85 YTGWLLDGTKFDSSLD---RKDK----FSFDLGKGEVIKAWDIAIATMKVGEVCHITCKP
         60        70               80        90       100         

          200       210       220                                  
pF1KB6 EWAYGKKGQPDAKIPPNAKLTFEVELVDID                              
       :.:::. :.:  :::::: :.::::: .                                
CCDS85 EYAYGSAGSPP-KIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGA
     110       120        130       140       150       160        

>>CCDS1706.1 FKBP1B gene_id:2281|Hs108|chr2               (108 aa)
 initn: 297 init1: 139 opt: 277  Z-score: 333.6  bits: 67.9 E(32554): 2.9e-12
Smith-Waterman score: 278; 43.2% identity (69.4% similar) in 111 aa overlap (116-224:8-108)

          90       100       110       120         130       140   
pF1KB6 KNVKLNEDKPKETKSEETLDEGPPKYTKSVLKKGDKTNFPKKGD--VVHCWYTGTLQDGT
                                     .. ::  .:::::.  :::  ::: ::.: 
CCDS17                        MGVEIETISPGDGRTFPKKGQTCVVH--YTGMLQNGK
                                      10        20          30     

           150       160       170       180       190       200   
pF1KB6 VFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQ
        ::..      . .: ::..:..:  .::.:..:.   :: :..:.:   :. :::  :.
CCDS17 KFDSS------RDRN-KPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGH
          40               50        60        70        80        

           210       220    
pF1KB6 PDAKIPPNAKLTFEVELVDID
       : . ::::: : :.:::....
CCDS17 PGV-IPPNATLIFDVELLNLE
       90        100        

>>CCDS54996.1 FKBP5 gene_id:2289|Hs108|chr6               (268 aa)
 initn: 210 init1: 106 opt: 266  Z-score: 314.9  bits: 65.7 E(32554): 3.2e-11
Smith-Waterman score: 266; 38.3% identity (62.4% similar) in 141 aa overlap (86-222:5-136)

          60        70        80        90       100       110     
pF1KB6 KDHLVTAYNHLFETKRFKGTESISKVSEQVKNVKLNEDKPKETKSEETLDEGPPK---YT
                                     ...: ::..:  : .:.  :    :     
CCDS54                           MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVL
                                         10        20        30    

            120       130       140       150       160       170  
pF1KB6 KSVLKKGDKTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVI
       : : . :.  . :  :: :.  : : :..:  ::..      . .: .:. :..: :.::
CCDS54 KIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSS------HDRN-EPFVFSLGKGQVI
           40        50        60        70               80       

            180       190       200        210       220           
pF1KB6 RGWDEALLTMSKGEKARLEIEPEWAYGKKGQ-PDAKIPPNAKLTFEVELVDID       
       ..:: .. ::.:::  .:  .::.:::. :. :  ::: :: : ::.::.:         
CCDS54 KAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP--KIPSNATLFFEIELLDFKGEDLFED
        90       100       110       120         130       140     

CCDS54 GGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCRDVAFTVGEGEDHDIPIGIDKA
         150       160       170       180       190       200     

>>CCDS4808.1 FKBP5 gene_id:2289|Hs108|chr6                (457 aa)
 initn: 184 init1: 106 opt: 266  Z-score: 311.4  bits: 65.8 E(32554): 5e-11
Smith-Waterman score: 266; 38.3% identity (62.4% similar) in 141 aa overlap (86-222:5-136)

          60        70        80        90       100       110     
pF1KB6 KDHLVTAYNHLFETKRFKGTESISKVSEQVKNVKLNEDKPKETKSEETLDEGPPK---YT
                                     ...: ::..:  : .:.  :    :     
CCDS48                           MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVL
                                         10        20        30    

            120       130       140       150       160       170  
pF1KB6 KSVLKKGDKTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVI
       : : . :.  . :  :: :.  : : :..:  ::..      . .: .:. :..: :.::
CCDS48 KIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSS------HDRN-EPFVFSLGKGQVI
           40        50        60        70               80       

            180       190       200        210       220           
pF1KB6 RGWDEALLTMSKGEKARLEIEPEWAYGKKGQ-PDAKIPPNAKLTFEVELVDID       
       ..:: .. ::.:::  .:  .::.:::. :. :  ::: :: : ::.::.:         
CCDS48 KAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP--KIPSNATLFFEIELLDFKGEDLFED
        90       100       110       120         130       140     

CCDS48 GGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCRDVAFTVGEGEDHDIPIGIDKA
         150       160       170       180       190       200     




224 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 13:03:25 2016 done: Fri Nov  4 13:03:25 2016
 Total Scan time:  1.880 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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