GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:13:38

Sequence gi568815582f:57272569_57483029 : 210461 bp : 48.10% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1431   1426    6                               1.05
 1.02 Term -  11687  11604   84  2  0   86   53    76 0.604   1.55
 1.01 Init -  11972  11838  135  2  0  122   85   274 0.996  30.64
 1.00 Prom -  12632  12593   40                              -3.96

 2.00 Prom +  42360  42399   40                              -3.16
 2.01 Sngl +  48729  48995  267  2  0   30   47   199 0.581   5.23
 2.02 PlyA +  49694  49699    6                               1.05

 3.03 PlyA -  50750  50745    6                               1.05
 3.02 Term -  70807  70638  170  2  2   79   41    57 0.322  -1.86
 3.01 Init -  75882  75804   79  0  1   83   90    54 0.806   6.32
 3.00 Prom -  79597  79558   40                              -4.06

 4.00 Prom +  79607  79646   40                              -4.06
 4.01 Init +  86249  86321   73  1  1   68   94   141 0.999  11.94
 4.02 Term +  87869  87996  128  0  2   73   48   193 0.432  12.24
 4.03 PlyA +  89289  89294    6                               1.05

 5.00 Prom +  93294  93333   40                              -7.46
 5.01 Init + 100001 100070   70  1  1   94  119   130 0.993  15.92
 5.02 Intr + 107066 107186  121  0  1   75   53    74 0.728   2.15
 5.03 Term + 109462 110464 1003  1  1   99   43   634 0.853  51.57
 5.04 PlyA + 112453 112458    6                               1.05

 6.07 PlyA - 113210 113205    6                               1.05
 6.06 Term - 119865 119753  113  1  2   56   42    75 0.204  -1.58
 6.05 Intr - 121507 121418   90  2  0  120   92   -33 0.158   0.27
 6.04 Intr - 125462 125274  189  0  0   90   80    91 0.971   8.06
 6.03 Intr - 126797 126652  146  1  2  138   94    33 0.688   8.83
 6.02 Intr - 131910 131826   85  1  1   94   80    20 0.464   0.68
 6.01 Init - 135767 135722   46  2  1   35   92    41 0.149   0.05
 6.00 Prom - 136462 136423   40                              -9.75

 7.00 Prom + 138031 138070   40                              -6.86
 7.01 Init + 141365 141434   70  1  1  120   94   197 0.999  22.71
 7.02 Intr + 142513 142630  118  2  1  122   86   149 0.822  17.62
 7.03 Term + 144664 144763  100  1  1   63   41   102 0.438   0.60
 7.04 PlyA + 146221 146226    6                               1.05

 8.09 PlyA - 148399 148394    6                               1.05
 8.08 Term - 156712 156602  111  1  0  115   49   119 0.990   9.26
 8.07 Intr - 157771 157690   82  0  1   88   46    70 0.933   2.44
 8.06 Intr - 158902 158583  320  1  2   85  105   180 0.798  14.16
 8.05 Intr - 159992 159919   74  0  2   32   89   153 0.991   8.93
 8.04 Intr - 161644 161476  169  1  1   59  110   129 0.955  11.72
 8.03 Intr - 164164 164088   77  2  2   78   94    31 0.993   1.93
 8.02 Intr - 166766 166614  153  0  0   72   82    40 0.750   1.84
 8.01 Init - 168360 168204  157  0  1   76  101   179 0.999  18.08
 8.00 Prom - 171643 171604   40                              -8.16

 9.00 Prom + 172585 172624   40                              -6.16
 9.01 Init + 174938 175010   73  1  1   93   93   129 0.990  13.13
 9.02 Intr + 178472 178640  169  0  1   69   96    98 0.987   7.70
 9.03 Intr + 180233 180368  136  2  1   63   89   226 0.981  20.77
 9.04 Intr + 183936 184078  143  2  2   76   83    75 0.881   4.95
 9.05 Intr + 184363 184447   85  1  1  110   48    33 0.890   1.32
 9.06 Intr + 185678 185782  105  1  0  106   76   122 0.999  13.21
 9.07 Intr + 186997 187152  156  0  0   25   96   261 0.993  20.81
 9.08 Intr + 187483 187536   54  0  0   76  113    37 0.911   4.18
 9.09 Intr + 190115 190242  128  1  2   29   60   206 0.253  11.38
 9.10 Intr + 190461 190510   50  0  2   91   87    51 0.989   3.62
 9.11 Intr + 193385 193453   69  0  0   91   97    35 0.934   3.85
 9.12 Intr + 193607 193659   53  0  2  110   79    92 0.937   9.13
 9.13 Intr + 196597 196725  129  0  0  119   77   162 0.997  19.09
 9.14 Intr + 197142 197193   52  2  1   74  115   136 0.999  13.38
 9.15 Intr + 197393 197561  169  0  1  131   80   292 0.999  31.70
 9.16 Intr + 197712 197786   75  0  0   76  116   179 0.999  18.13
 9.17 Term + 198407 198551  145  2  1   75   36   116 0.986   2.48
 9.18 PlyA + 199094 199099    6                               1.05

10.09 PlyA - 199377 199372    6                               1.05
10.08 Term - 200927 200809  119  0  2  117   47    71 0.947   4.60
10.07 Intr - 201168 201045  124  0  1  112  105   197 0.999  23.96
10.06 Intr - 201471 201333  139  2  1   99   72   219 0.876  21.87
10.05 Intr - 202414 202225  190  2  1   88   74   329 0.999  30.14
10.04 Intr - 202651 202532  120  2  0   28   94    95 0.506   4.57
10.03 Intr - 203052 202938  115  0  1   80   94   218 0.999  21.62
10.02 Intr - 203389 203282  108  1  0  102   72   168 0.863  17.08
10.01 Init - 206939 206874   66  2  0   96   84   133 0.395  14.77

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:57272569_57483029|GENSCAN_predicted_peptide_1|72_aa
MAEFPSKVSTRTSSPAQGAEASVSALRPDLGFVRSRLGALMLLQLGASRTDAPKIALHPS
HHDTTPWPSLRA

>gi568815582f:57272569_57483029|GENSCAN_predicted_CDS_1|219_bp
atggccgagttcccgtcgaaagttagcacgcggaccagcagtcctgcgcagggcgccgaa
gcctcggtgtcggcgctgcgcccggacctgggcttcgtgcgctcccgcctcggggcgctc
atgctgctgcagctgggcgcttcccgcacggacgcccccaagatcgccctgcatccctct
caccacgacactaccccgtggccgtcgctgcgagcgtga

>gi568815582f:57272569_57483029|GENSCAN_predicted_peptide_2|88_aa
MLYDRINDEKSRNRPFSQDGTKGKEGSSCPPKAEAKSKALKDKKAVLKGVHSHIKKKIHT
SPIFPWPRRCDSRGSPDILRRAPQEKQA

>gi568815582f:57272569_57483029|GENSCAN_predicted_CDS_2|267_bp
atgctatatgatagaataaatgatgaaaaatctcgaaatagacccttttcacaagatggc
accaaaggcaaagaaggaagctcctgcccccctaaagctgaagccaaatcgaaggctttg
aaggacaagaaggcagtgctgaaaggtgtccacagccacataaaaaagaagatccacaca
tcacccatcttcccgtggccaagacgctgcgactccagaggcagcccagatatcctcaga
agagcaccccaggagaaacaagcttga

>gi568815582f:57272569_57483029|GENSCAN_predicted_peptide_3|82_aa
MQFWVLGVPNKELEETHMESKAKQQQETRSYQKTTPTCNCRICPLHFPCSSLKDKLVQPK
ACGSLEAQDSFECGPTQMRKLS

>gi568815582f:57272569_57483029|GENSCAN_predicted_CDS_3|249_bp
atgcagttctgggttcttggtgtcccgaacaaagaactggaggagacacacatggaaagc
aaagcaaagcagcaacaggaaacgagaagttaccagaagaccacacccacctgcaactgt
cgcatctgcccactgcattttccttgttcctcactcaaggataagcttgtccaacccaag
gcctgtgggtcgcttgaggcccaggacagctttgaatgtggcccaacacaaatgcgtaaa
ctttcttaa

>gi568815582f:57272569_57483029|GENSCAN_predicted_peptide_4|66_aa
MDRLQTALLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPLRVVKHFYWTSDSC
PRPGVV

>gi568815582f:57272569_57483029|GENSCAN_predicted_CDS_4|201_bp
atggatcgcctacagactgcactcctggttgtcctcgtcctccttgctgtggcgcttcaa
gcaactgaggcaggcccctacggcgccaacatggaagacagcgtctgctgccgtgattac
gtccgttaccgtctgcccctgcgcgtggtgaaacacttctactggacctcagactcctgc
ccgaggcctggcgtggtgtga

>gi568815582f:57272569_57483029|GENSCAN_predicted_peptide_5|397_aa
MAPISLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK
RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG
MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP
VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA
PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE
PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF
TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV

>gi568815582f:57272569_57483029|GENSCAN_predicted_CDS_5|1194_bp
atggctccgatatctctgtcgtggctgctccgcttggccaccttctgccatctgactgtc
ctgctggctggacagcaccacggtgtgacgaaatgcaacatcacgtgcagcaagatgaca
tcaaagatacctgtagctttgctcatccactatcaacagaaccaggcatcatgcggcaaa
cgcgcaatcatcttggagacgagacagcacaggctgttctgtgccgacccgaaggagcaa
tgggtcaaggacgcgatgcagcatctggaccgccaggctgctgccctaactcgaaatggc
ggcaccttcgagaagcagatcggcgaggtgaagcccaggaccacccctgccgccggggga
atggacgagtctgtggtcctggagcccgaagccacaggcgaaagcagtagcctggagccg
actccttcttcccaggaagcacagagggccctggggacctccccagagctgccgacgggc
gtgactggttcctcagggaccaggctccccccgacgccaaaggctcaggatggagggcct
gtgggcacggagcttttccgagtgcctcccgtctccactgccgccacgtggcagagttct
gctccccaccaacctgggcccagcctctgggctgaggcaaagacctctgaggccccgtcc
acccaggacccctccacccaggcctccactgcgtcctccccagccccagaggagaatgct
ccgtctgaaggccagcgtgtgtggggtcagggacagagccccaggccagagaactctctg
gagcgggaggagatgggtcccgtgccagcgcacacggatgccttccaggactgggggcct
ggcagcatggcccacgtctctgtggtccctgtctcctcagaagggacccccagcagggag
ccagtggcttcaggcagctggacccctaaggctgaggaacccatccatgccaccatggac
ccccagaggctgggcgtccttatcactcctgtccctgacgcccaggctgccacccggagg
caggcggtggggctgctggccttccttggcctcctcttctgcctgggggtggccatgttc
acctaccagagcctccagggctgccctcgaaagatggcaggagagatggcggagggcctt
cgctacatcccccggagctgtggtagtaattcatatgtcctggtgcccgtgtga

>gi568815582f:57272569_57483029|GENSCAN_predicted_peptide_6|222_aa
MSEWMDGGWMMDGRVAPSFRLLGPETWALSLTPLPLAPNFPSVGPPLLLPWWLPTPDTLE
RGPQPCGWDFSFIDLMVVVAMYKHLETGQTGPEDGEPIEHDCQQIAAQTYATQEDLLEVP
LANPDLNLYADGSSFAENGIQRAGYAIVTDVTVLERSAVVTGTQRETGHIHAFPHRSFRN
TVGQADIPRNNTLHPIKLTFNINHHNIRAIKTLEHQRISEKL

>gi568815582f:57272569_57483029|GENSCAN_predicted_CDS_6|669_bp
atgagtgaatggatggatggaggatggatgatggatggacgtgtggccccttccttccgg
ttactagggccagaaacctgggcgctatccctgacgcctcttcctctcgcccccaacttc
ccatctgttgggccaccactgctgttgccctggtggttacctacccctgacactctagaa
agagggccccagccatgtggatgggatttctccttcattgatctgatggtggtcgtggca
atgtataagcacctggaaacaggtcagacaggtccagaggatggggaaccaattgagcat
gactgccaacaaattgcagcccagacttatgccacccaagaggatctcttggaagtcccc
ttagctaatcctgaccttaacctatatgctgatggaagttcatttgcggagaatgggata
caaagggcaggttatgccatagttactgatgtaacagtacttgaaagatctgcagtggtc
actgggacacaaagggaaacagggcacatccatgccttccctcacagatctttcagaaac
acagtggggcaggcagacatacctaggaacaatactttgcatccaatcaagttgacattc
aacattaaccatcacaacatccgagccattaaaactctcgagcaccaacgtatttcagag
aaactgtaa

>gi568815582f:57272569_57483029|GENSCAN_predicted_peptide_7|95_aa
MAPLKMLALVTLLLGASLQHIHAARGTNVGRECCLEYFKGAIPLRKLKTWYQTSEDCSRD
AIVQLIAGQMIEPKFTFQYGHSDNEVDKTSELACL

>gi568815582f:57272569_57483029|GENSCAN_predicted_CDS_7|288_bp
atggccccactgaagatgctggccctggtcaccctcctcctgggggcttctctgcagcac
atccacgcagctcgagggaccaatgtgggccgggagtgctgcctggagtacttcaaggga
gccattccccttagaaagctgaagacgtggtaccagacatctgaggactgctccagggat
gccatcgttcagctcattgcagggcagatgatagaacccaagtttactttccagtacggg
cacagcgataacgaggttgataaaaccagtgaactggcttgcctgtga

>gi568815582f:57272569_57483029|GENSCAN_predicted_peptide_8|380_aa
MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSF
DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT
LSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK
KSSPSVKPAVDPAAAKLWTLSANDMEDDSMCIFCGCSLTHRWPLEHVVRLNMMINQKEDR
VDTFFTLDSKFPLEACSHFSFSLAETTTVSLIALNTLQDLIDSDELLDPEDLKKPDPASL
RAASCGEGKKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCPYLG
MPAFKPGEKVLLSDSNLHDA

>gi568815582f:57272569_57483029|GENSCAN_predicted_CDS_8|1143_bp
atggcagattttgggatctctgctggccagtttgtggcagtggtctgggataagtcatcc
ccagtggaggctctgaaaggtctggtggataagcttcaagcgttaaccggcaatgagggc
cgcgtgtctgtggaaaacatcaagcagctgttgcaatctgcccacaaagaatccagcttt
gacattattttgtcaggtttagtcccaggaagcaccactctgcacagtgctgagattttg
gctgaaatcgcccggatccttcggcctggtggatgtctttttctgaaggagccagtagag
acagctgtagataacaatagcaaagtgaagacagcatctaagctgtgttcagccctgact
ctttctggtcttgtggaagtgaaagagctgcagcgggagcccctaacccctgaggaagta
cagtctgttcgagaacaccttggtcatgaaagtgacaacctgctgtttgttcagatcaca
ggcaaaaaaccaaactttgaagtgggttcttctaggcagcttaagctttccatcaccaag
aagtcttctccttcagtgaaacctgctgtggaccctgctgctgccaagctgtggaccctc
tcagccaacgatatggaggacgacagcatgtgcatcttctgtggatgtagtttaactcac
cgttggcctcttgagcatgtggtcaggttgaacatgatgatcaaccaaaaggaggacagg
gtggacaccttctttaccctggactccaagtttcctctcgaagcctgcagtcactttagc
ttttcattagcagagaccacgactgtatcactcattgctttgaacactctccaggatctc
attgactcagatgagctgctggatccagaagatttgaagaagccagatccagcttccctg
cgggctgcttcttgtggggaagggaaaaagaggaaggcctgtaagaactgcacctgtggc
cttgccgaagaactggaaaaagagaagtcaagggaacagatgagctcccaacccaagtca
gcttgtggaaactgctacctgggcgatgccttccgctgtgccagctgcccctaccttggg
atgccagccttcaaacctggggaaaaggtgcttctgagtgatagcaatcttcatgatgcc
tag

>gi568815582f:57272569_57483029|GENSCAN_predicted_peptide_9|596_aa
MAAAAVSGALGRAGWRLLQLRCLPVARCRQALVPRAFHASAVGLRSSDEQKQQPPNSFSQ
QHSETQGAEKPDPESSHSPPRYTDQGGEEEEDYESEEQLQHRILTAALEFVPAHGWTAEA
IAEGAQSLGLSSAAASMFGKDGSELILHFVTQCNTRLTRVLEEEQKLVQLGQAEKRKTDQ
FLRDAVETRLRMLIPYIEHWPRALSILMLPHNIPSSLSLLTSMVDDMWHYAGDQSTDFNW
YTRRAMLAAIYNTTELVMMQDSSPDFEDTWRFLENRVNDAMNMGHTAKQVKSTGEALVQG
LMGAAVTSPRSRRGGWWPLGEMPYANQPTVRITELTDENVKFIIENTDLAVANSIRRVFI
AEVPIIAIDWVQIDANSSVLHDEFIAHRLGLIPLISDDIVDKLQYSRDCTCEEFCPECSV
EFTLDVRCNEDQTRHVTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQEL
RLRAYAKKGFGKEHAKWNPTAGVAFEYDPDNALRHTVYPKPEEWPKSEYSELDEDESQAP
YDPNGKPERFYYNVESCGSLRPETIVLSALSGLKKKLSDLQTQLSHEIQSDVLTIN

>gi568815582f:57272569_57483029|GENSCAN_predicted_CDS_9|1791_bp
atggcggcggcggcggtatctggtgcgcttggccgggcgggctggaggctcctgcagctg
cgatgcctgcccgtggcccgttgccgacaagccctggtgccgcgtgccttccatgcttca
gctgtggggctaaggtcttcagatgagcagaagcagcagcctcccaactcattttctcag
cagcattctgagacacagggggcagaaaaacctgatccagagtcttctcattcacccccc
aggtatacagaccagggcggcgaggaggaggaggactatgaaagtgaggagcagttgcag
caccgcatcctgacggcagcccttgagtttgtgcccgcccacgggtggacagcagaggcg
attgcagaaggagcccagtctctgggtctctccagtgcagcagccagcatgttcgggaag
gatggcagtgagctaatactgcattttgtgacccagtgcaatacccggctcacacgtgtg
ctagaagaggagcagaagctggtacagttgggccaggcggagaagaggaagacagaccag
ttcctgagggatgcagtggaaaccagactgagaatgctgatcccatacattgagcactgg
ccccgggccctcagcatcctcatgctccctcacaacatcccgtccagcctgagcctgctc
accagcatggtggatgacatgtggcattacgctggggaccagtccactgattttaactgg
tacacccgccgagccatgctggctgccatctacaacacaacagagctggtgatgatgcag
gactcctctccagactttgaggacacttggcgcttcctggaaaaccgggttaatgatgca
atgaacatgggccacactgccaagcaggtaaagtccacaggagaggcactggtgcaagga
ctcatgggtgcagcagtgacgtcaccgcggagcagacgcggaggctggtggcccctgggc
gagatgccgtacgccaaccagcctaccgtgcggatcacggagctcactgacgagaatgtc
aagttcatcatcgagaacaccgacctggcggtggccaattcgattcggagggtcttcatc
gctgaggttcccataatagccattgactgggttcagattgatgccaattcctcagttctt
catgatgaattcattgctcacaggcttggattaattcccctcattagtgatgacattgtg
gacaagctgcagtactctcgggactgcacatgtgaggagttctgccccgagtgctcggtg
gagttcaccctcgatgtgcggtgcaatgaagaccagacgcgacatgtcacgtctcgagac
ctcatctccaacagcccccgggtcattccggtgacatcccggaaccgagataatgacccc
aatgactacgtggagcaggatgacatcctcatcgtcaagttgagaaagggccaggagctg
agacttcgagcctatgccaaaaagggctttggcaaggagcatgccaagtggaaccctact
gcaggggtggcttttgaatacgatccagacaatgccctgaggcacacagtgtaccccaag
cccgaggaatggccaaagagtgagtactcggagctggatgaggatgagtcgcaggctccc
tatgaccccaacggcaagccagaaaggttttactacaatgtggagtcctgtggctctctg
cgtcctgaaaccattgtcctgtcagccctctcaggattgaagaagaaactgagtgattta
caaactcaattaagccacgagatccagagtgatgtgctaaccataaattaa

>gi568815582f:57272569_57483029|GENSCAN_predicted_peptide_10|326_aa
MATNFSDIVKQGYVKMKSRKLGIYRRCWLVFRKSSSKGPQRLEKYPDEKSVCLRGCPKVT
EISNVKCVTRLPKETKRQAVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDIS
LGEPDLLAPGVQCEQTDRFNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWP
LCSLRRYGRDATRFTFEAGRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLE
MEKNVRLLNKGTEHYSYPCTPTTMLPRSAYWHHITGSQNIAEASSYAGEGYGAAQASSET
DLLNRFILLKPKPSQGDSSEAKTPSQ

>gi568815582f:57272569_57483029|GENSCAN_predicted_CDS_10|981_bp
atggcgaccaatttcagtgacatcgtcaagcaaggctacgtgaagatgaagagcaggaag
ctcgggatctaccggaggtgctggctggtgttccggaaatcctccagcaaggggccccag
cggctggagaagtatccagatgagaagtcggtgtgcctccggggctgccccaaggtgact
gagatcagcaacgtcaagtgtgttacgcggctccccaaggagaccaagcggcaggcggtg
gccatcatattcactgatgactcggcacgtaccttcacctgcgactcagagctagaggca
gaggagtggtacaagacactatctgtggagtgtctggggtcccgcctcaacgacatcagt
ctgggagaacctgacctcctggccccaggggtgcagtgtgaacagacagatcgcttcaat
gtcttcctgctgccctgccccaacctggacgtgtatggcgagtgcaagctgcagatcacc
cacgagaacatctacctctgggacatccacaacccccgtgtgaagctcgtctcgtggccc
ctctgctcactgcgccgctatggccgggatgccacacgctttaccttcgaggctggccgg
atgtgtgatgctggggaaggactctataccttccagacacaagagggggagcagatttac
cagcgcgtccacagtgccaccctggccatcgcagagcagcacaagcgggtcctgctggaa
atggagaagaacgtgaggctgctgaacaagggcacggaacattactcgtatccctgcaca
cccacgaccatgctgccgcgcagtgcctactggcaccacatcactggttcccagaacatc
gccgaagcctccagctatgctggtgaggggtatggggcagcccaggccagctcggaaaca
gacctcctcaacagattcatcctgctaaagccaaagcccagccagggggacagcagtgag
gccaagaccccatcccagtga