GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:21:43

Sequence gi568815593f:174624660_174829580 : 204921 bp : 44.49% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  27763  28054  292  0  1   40   61   143 0.204   4.11
 1.02 Intr +  35500  35564   65  2  2  123   80    27 0.679   3.84
 1.03 Term +  37940  38050  111  1  0   81   39    80 0.538   0.96
 1.04 PlyA +  43358  43363    6                               1.05

 2.07 PlyA -  47703  47698    6                               1.05
 2.06 Term -  56224  56061  164  2  2  100   43   100 0.793   4.80
 2.05 Intr -  67859  67755  105  0  0  102   23    95 0.260   4.59
 2.04 Intr -  82344  82230  115  0  1   67   82     5 0.034  -2.18
 2.03 Intr -  85214  85140   75  2  0   53   91    51 0.173   1.61
 2.02 Intr -  91334  91205  130  1  1   50   55   105 0.701   4.10
 2.01 Init -  93514  93411  104  1  2   88   77    78 0.957   6.42
 2.00 Prom -  98370  98331   40                              -6.46

 3.00 Prom +  98885  98924   40                              -7.06
 3.01 Init + 100001 100379  379  1  1   84   89   535 0.999  50.27
 3.02 Term + 104500 104924  425  2  2  125   49   358 0.988  31.06
 3.03 PlyA + 105198 105203    6                               1.05

 4.06 PlyA - 105724 105719    6                               1.05
 4.05 Term - 109011 108908  104  1  2   59   34    76 0.020  -2.26
 4.04 Intr - 126232 126215   18  2  0  111  107    11 0.120   1.88
 4.03 Intr - 127274 127132  143  1  2   26   60   114 0.108   2.40
 4.02 Intr - 140097 139953  145  1  1   -3  101    62 0.008  -2.26
 4.01 Init - 157830 157761   70  0  1   47   95    52 0.186   3.01
 4.00 Prom - 160117 160078   40                              -3.56

 5.03 PlyA - 160133 160128    6                               1.05
 5.02 Term - 173770 173621  150  1  0   91   49    84 0.550   2.71
 5.01 Init - 184780 184595  186  1  0   70   55   118 0.451   5.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:174624660_174829580|GENSCAN_predicted_peptide_1|155_aa
MKLLQENTGETLQDIGLGKNSSRNTRQAKATKAKMNKWDHIKLKIFCTAKATINKVKRQP
TEWEKIFANCPSDKGVITRIYKELEQLYGKKANNPIKSHSQDNDKTTPYNYSSSLCSQQN
RMMKSCTDPLHPTWDVNHPIVQHIRTFYATYLLVT

>gi568815593f:174624660_174829580|GENSCAN_predicted_CDS_1|468_bp
atgaaactactacaagaaaacactggagaaactctccaggacattggtctgggcaaaaat
tcatcgagaaatacccgccaagcaaaggcaactaaagcgaaaatgaacaaatgggatcac
atcaagttaaaaatcttctgcacagcaaaggcaacaatcaacaaagtgaagagacaaccc
acagaatgggagaaaatatttgcaaactgtccatctgacaagggagtaataaccagaata
tataaggagctcgaacaactctacggcaaaaaagctaataatccgataaaaagtcactct
caagataatgataaaaccaccccatacaattactcctccagcctgtgcagtcaacagaat
cgcatgatgaaatcttgcaccgacccactccatcccacctgggacgtgaatcaccccatt
gtccagcatatccgcaccttctatgccacctacctgttagtcacttag

>gi568815593f:174624660_174829580|GENSCAN_predicted_peptide_2|230_aa
MPFGAWIHEDPMWGPPGFVMHSQHCVQCPEEPLACCKEAYENYIAKNPQGLSGSTRKLCP
SGGTSFTQRNDFGESLDRHLAMDVLEAAAVTEFPRLEFLEKGQIFGGQVIEAIIPDIHLF
FLQQIFTECLLSTGHTVLGSEGGHAESGAQREVTLMTSLGSEEHFKEIISHAPNGQVSEA
KIFQRPAERNANPKAFRRPLEKTCKGIQKAAEVKLPLKDKDPSSGPLGFE

>gi568815593f:174624660_174829580|GENSCAN_predicted_CDS_2|693_bp
atgccttttggggcctggatccatgaagacccgatgtgggggcccccaggatttgtcatg
cattcacagcactgtgtccagtgcccagaagagcctttggcatgttgcaaagaggcttat
gaaaattacattgctaaaaaccctcagggcctttcgggcagcacaagaaagctgtgccca
agtggtggcaccagctttacccagagaaatgattttggagagtctctggacaggcatttg
gcaatggatgtgttagaagcagcagcagtaacggaattcccaaggcttgaattcctagaa
aagggccagatatttggaggccaagttatagaggctataatcccagacattcatttattc
tttcttcaacaaatatttaccgagtgcctactgagcaccggccacacggttctaggatct
gaaggaggacacgcagagtccggggcccagagagaagtgaccctaatgacctcattaggc
tctgaggagcactttaaggagatcatcagccatgcacctaatggacaggtttctgaagct
aagatcttccagagacctgcagaaagaaatgctaacccaaaggcattcagaagacctcta
gagaagacctgtaaaggcattcagaaagctgctgaggtgaagctccctttgaaagacaag
gacccctcttctgggccactgggttttgaatag

>gi568815593f:174624660_174829580|GENSCAN_predicted_peptide_3|267_aa
MASPSKGNDLFSPDEEGPAVVAGPGPGPGGAEGAAEERRVKVSSLPFSVEALMSDKKPPK
EASPLPAESASAGATLRPLLLSGHGAREAHSPGPLVKPFETASVKSENSEDGAAWMQEPG
RYSPPPRHMSPTTCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLN
LTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPSSFSLPFPISSPLQAASIYGASY
PFHRPVLPIPPVGLYATPVGYGMYHLS

>gi568815593f:174624660_174829580|GENSCAN_predicted_CDS_3|804_bp
atggcttctccgtccaaaggcaatgacttgttttcgcccgacgaggagggcccagcagtg
gtggccggaccaggcccggggcctgggggcgccgagggggccgcggaggagcgccgcgtc
aaggtctccagcctgcccttcagcgtggaggcgctcatgtccgacaagaagccgcccaag
gaggcgtccccgctgccggccgaaagcgcctcggccggggccaccctgcggccactgctg
ctgtcggggcacggcgctcgggaagcgcacagccccgggccgctggtgaagcccttcgag
accgcctcggtcaagtcggaaaattcagaagatggagcggcgtggatgcaggaacccggc
cgatattcgccgccgccaagacatatgagccctaccacctgcaccctgaggaaacacaag
accaatcggaagccgcgcacgccctttaccacatcccagctcctcgccctggagcgcaag
ttccgtcagaaacagtacctctccattgcagagcgtgcagagttctccagctctctgaac
ctcacagagacccaggtcaaaatctggttccagaaccgaagggccaaggcgaaaagactg
caggaggcagaactggaaaagctgaaaatggctgcaaaacctatgctgccctccagcttc
agtctccctttccccatcagctcgcccctgcaggcagcgtccatatatggagcatcctac
ccgttccatagacctgtgcttcccatcccgcctgtgggactctatgccacgccagtggga
tatggcatgtaccacctgtcctaa

>gi568815593f:174624660_174829580|GENSCAN_predicted_peptide_4|159_aa
MEEYFLNLIKGIYEKPTDNIILYVHEELSDSLFDPIIYQPWEAEIQRPLFRWGIQDSETE
RVATVCTWRSPRPSPPVEVPDLLPNRGEHGACAPDGGHPRQDSPHKRRRKVPREKGAAAG
RMIHAEACSITNAGWKTFLLTKMEGERGTDTVNFTNQAL

>gi568815593f:174624660_174829580|GENSCAN_predicted_CDS_4|480_bp
atggaagagtatttcctcaacctgataaagggtatctatgaaaaacccacagataacatt
atactttatgttcatgaagaactttcagattccttatttgatccaatcatctaccagccc
tgggaggcagagattcagcgcccactcttcagatggggaatccaagactctgagacagaa
agggtggccacggtctgcacctggaggagcccacgacccagcccgcctgtggaagtcccc
gatctcctgccgaacagaggggagcacggggcctgtgcacctgacggcggacaccctcgc
caggactcgccccacaaaagacgccggaaagtgccgcgggagaagggggctgcagccggt
cggatgattcatgctgaagcctgcagcatcaccaatgcggggtggaaaacatttttgctt
acaaaaatggaaggagagagaggaacagacacagtcaacttcaccaaccaggccctgtga

>gi568815593f:174624660_174829580|GENSCAN_predicted_peptide_5|111_aa
MTSTLGLGHGQNVKSKGGHEAYPCPGWNIRLASAQTAIDSHTGELPLYPGGDRPNQGSLN
RGRSTRSNKTVPRPDTQLLPAITEAGHAADFHPQETKEKGYTCERLVMNAF

>gi568815593f:174624660_174829580|GENSCAN_predicted_CDS_5|336_bp
atgaccagcacgctgggccttggacatggtcagaacgtgaaaagcaagggaggccatgag
gcctacccctgtcctgggtggaacatacggcttgcatcagctcagactgccattgacagc
cacactggggagctgcccctttatcctggaggtgacaggcccaaccagggatctttgaat
aggggaagaagcacacgcagtaacaagactgtaccccgaccagacacccaactcttgcca
gctatcactgaggctggccacgctgcagacttccacccccaggaaactaaggagaaagga
tacacatgtgaaaggcttgtcatgaatgccttctga