GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:24:15

Sequence gi568815578r:44843112_45060333 : 217222 bp : 41.56% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1005   1072   68  2  2   85   92    36 0.243   4.30
 1.02 Intr +  13708  13923  216  1  0  -19   53   490 0.148  31.50
 1.03 Intr +  40753  40883  131  1  2   50   86    76 0.448   3.02
 1.04 Intr +  42567  42775  209  1  2  -15  113   168 0.123   6.87
 1.05 Intr +  43045  43249  205  0  1   17   52   134 0.049   0.55
 1.06 Intr +  44537  44631   95  0  2   42   99    61 0.165   1.36
 1.07 Intr +  58420  58722  303  0  0  112   99   309 0.895  30.26
 1.08 Intr +  60882  61005  124  2  1   62  106   101 0.993   8.54
 1.09 Intr +  61857  62020  164  1  2   77   93    34 0.985   1.57
 1.10 Intr +  62890  62985   96  0  0   36   93   115 0.973   6.09
 1.11 Term +  63271  63327   57  0  0  132   35    72 0.983   3.01
 1.12 PlyA +  63394  63399    6                              -0.45

 2.00 Prom +  64584  64623   40                              -2.95
 2.01 Init +  67033  67225  193  0  1  100  101   286 0.939  30.28
 2.02 Intr +  69038  69058   21  0  0  104   80    29 0.550   0.30
 2.03 Intr +  69549  69796  248  1  2  101   40   246 0.356  17.36
 2.04 Intr +  73645  73760  116  0  2   89   65   136 0.499   9.73
 2.05 Intr +  75795  75934  140  0  2   64   60   174 0.963  11.39
 2.06 Intr +  76072  76166   95  2  2   88   97   127 0.984  12.36
 2.07 Intr +  78483  78620  138  2  0  111   94   208 0.135  23.44
 2.08 Intr +  81050  81145   96  1  0   49  100   127 0.031   9.29
 2.09 Intr +  87349  87615  267  0  0  116   66   281 0.487  25.51
 2.10 Intr +  89231  89321   91  1  1   96   76    -2 0.375  -1.95
 2.11 Intr +  89961  90074  114  1  0   66   95    41 0.262   2.10
 2.12 Intr +  92280  92386  107  1  2  102   90    40 0.303   4.61
 2.13 Intr +  93526  93619   94  0  1   36   97   106 0.155   4.92
 2.14 Intr +  94950  95080  131  1  2   16  121   124 0.876   7.99
 2.15 Intr +  95388  95481   94  2  1   54   89    49 0.962   0.22
 2.16 Intr +  95563  95637   75  2  0   97   94   162 0.995  16.27
 2.17 Intr +  96219  96561  343  1  1   57   71    81 0.409  -3.14
 2.18 Term +  96638  97019  382  2  1   43   41   245 0.577   8.63
 2.19 PlyA +  97653  97658    6                               1.05

 3.09 PlyA -  98023  98018    6                               1.05
 3.08 Term - 100102  99998  105  1  0   99   42    88 0.974   2.73
 3.07 Intr - 100468 100342  127  0  1   98   93   100 0.997  11.26
 3.06 Intr - 105766 105619  148  2  1   68   70   197 0.942  14.27
 3.05 Intr - 108891 108722  170  2  2  100   83   147 0.999  14.07
 3.04 Intr - 112109 111957  153  1  0   98   99   247 0.953  25.07
 3.03 Intr - 113374 113275  100  2  1   91   88   127 0.999  11.25
 3.02 Intr - 117458 117096  363  0  0   62  102   313 0.414  24.33
 3.01 Init - 121096 120928  169  1  1   82   36   103 0.236   4.26
 3.00 Prom - 121685 121646   40                              -7.15

 4.00 Prom + 122754 122793   40                              -8.75
 4.01 Init + 124078 124160   83  0  2   48   92    56 0.617   2.49
 4.02 Intr + 128967 129047   81  0  0   91   96   134 0.991  12.33
 4.03 Intr + 135332 135460  129  2  0   74  103   153 0.993  14.29
 4.04 Intr + 138718 138832  115  1  1   98   90    86 0.991   9.33
 4.05 Intr + 144021 144185  165  2  0   74   98    74 0.983   6.24
 4.06 Intr + 151979 152146  168  1  0  103   90   200 0.970  20.92
 4.07 Intr + 154058 154195  138  1  0   65   80    89 0.974   5.54
 4.08 Intr + 157281 157409  129  2  0   80   70   160 0.994  13.37
 4.09 Intr + 158056 158242  187  0  1   87   78   276 0.862  24.84
 4.10 Intr + 164040 164120   81  1  0   79   94    18 0.244   0.19
 4.11 Intr + 181862 182019  158  0  2  118   78   155 0.468  16.31
 4.12 Term + 205767 205793   27  2  0  111   41    24 0.003  -2.90
 4.13 PlyA + 206197 206202    6                               1.05

 5.02 PlyA - 207217 207212    6                               1.05
 5.01 Sngl - 214112 213759  354  2  0   76   45   196 0.919   9.90

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  13708  13927  220  1  1  -19   42   488 0.825  29.03
S.002 Term +  78483  78659  177  2  0  111   54   244 0.864  20.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:44843112_45060333|GENSCAN_predicted_peptide_1|555_aa
MKTLRDDVACPKFTQVVESRGTRRRRKRKRRRRRRRRGRRRKEEEEEEEEEEEEEEEEEE
EEEEEEEEEGGGGGEEEGEGEGEWEEEEEEEAALRNVDTVLPDKAERQISVHTETFQFKK
VLATKSNCLEILEMAYWEGPERKWRSERKWSYRHRRRRFRSRGSRRRRRRCSHCRHRCRR
LSSGLRKEEVISLGASLGRVFVPCSPPTGQRSRGSRTLPHYLLRAPRDPSLRLGRQERPL
QPCHLCSVLSGFQKLKFNQTRMSFLAPVPVFGSSWMSRVSRDLGRYKKCILPIRLWIEKQ
EEHWTWSQGMTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYK
NVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNA
TQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLG
LALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWT
SENQGDEGDAGEGEN

>gi568815578r:44843112_45060333|GENSCAN_predicted_CDS_1|1668_bp
atgaagactctcagggatgatgtggcttgcccaaagttcacacaggtagtggaaagcaga
ggaaccagaagaagaaggaagaggaagaggaggaggaggaggagaagaagaggaagaaga
agaaaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaggaagaagaagaaggaggaggaggaggagaagaagaaggggagggg
gagggggaatgggaagaggaagaggaagaggaagcagctctgagaaatgtggacacagtg
ttaccagacaaggcagagaggcagatttctgttcacacagaaacttttcagtttaaaaaa
gtgttggcaactaagtcaaactgcttagaaatactggagatggcatattgggagggaccg
gagcggaagtggcgatcggagcggaagtggagctaccgccaccgccgccgccgattccgg
agccggggtagtcgccgccgccgccgccgctgcagccactgcaggcaccgctgccgccgc
ctgagtagtgggcttaggaaggaagaggtcatctcgctcggagcttcgctcggaagggtc
tttgttccctgcagccctcccacgggacagcggagccggggatcccggaccctccctcac
tatctgcttcgggccccacgcgacccctccctgcgtcttggtcggcaagaacgtcccctt
cagccctgtcacctctgctccgtgctttctggtttccagaaattaaaatttaatcaaacg
cggatgagttttctagccccagtccccgtgtttggctcctcctggatgagcagagtctcc
agagatttgggccgctacaaaaagtgcattttgcccattcggctgtggatagagaagcag
gaagagcactggacttggagtcagggaatgacaatggataaaagtgagctggtacagaaa
gccaaactcgctgagcaggctgagcgatatgatgatatggctgcagccatgaaggcagtc
acagaacaggggcatgaactctccaacgaagagagaaatctgctctctgttgcctacaag
aatgtggtaggcgcccgccgctcttcctggcgtgtcatctccagcattgagcagaaaaca
gagaggaatgagaagaagcagcagatgggcaaagagtaccgtgagaagatagaggcagaa
ctgcaggacatctgcaatgatgttctggagctgttggacaaatatcttattcccaatgct
acacaaccagaaagtaaggtgttctacttgaaaatgaaaggagattattttaggtatctt
tctgaagtggcatctggagacaacaaacaaaccactgtgtcgaactcccagcaggcttac
caggaagcatttgaaattagtaagaaagaaatgcagcctacacacccaattcgtcttggt
ctggcactaaatttctcagtcttttactatgagattctaaactctcctgaaaaggcctgt
agcctggcaaaaacggcatttgatgaagcaattgctgaattggatacgctgaatgaagag
tcttataaagacagcactctgatcatgcagttacttagggacaatctcactctgtggaca
tcggaaaaccagggagacgaaggagacgctggggagggagagaactaa

>gi568815578r:44843112_45060333|GENSCAN_predicted_peptide_2|914_aa
MNASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ
QPADGEEQAQRAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNK
ALYDTFSTFGNILSCKVEDEGCTSLGRSVSTTCLVACDEHGSRGFGFVHFETHEAAQQAI
NTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFG
KMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNE
LKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGF
GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNP
LLGSFQQPSSYFLPAMPQPPAQAAYYGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVVPR
RPPAHISSVRQASTQVPRTVPHTQRVANIGTQTTGPSGVGCCTPGRPLLPCKCSSAAHST
YRVQEPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEID
NSELLLMLESPESLHAKVTDRAMGSCKQWWMGGFHRNPVDGGGSCIQDDRRGSGRAAGTP
GYGAAEGVHALKPGGPFVSEGGGDRANGRHDWGGAQALRNRNPKGVLKYTEGIYTRAGEV
LGTDPSTVQWMMTWISHNGPELQGPPSDVHAAPGLGTLQGKHPAASRLAKGLCNIINPCR
NVLGYLPRDVQSRSLPSRVPERPSESGYYDPSRLGSAKNSPATNLTESSRLLCHSQQLTL
PVLRSTDLQPVFTMSCPLLWLLLICSLCSSIVFSPNPDCWHFFTLSPGPSRFLMPCSPEL
SNLQAHLPFVPSRG

>gi568815578r:44843112_45060333|GENSCAN_predicted_CDS_2|2745_bp
atgaacgccagcggttctggctacccgcttgcctcgctttacgtgggcgatctgcacccc
gacgtgaccgaggccatgctctatgagaagttctctcccgccggccccatcctgtccatc
cgcgtgtgccgcgatgtagccacccggcgctcgctgggctacgcctacatcaacttccag
cagcccgcggacggtgaggaacaggctcagagagcggagcgggcactggacacaatgaac
tttgagatgctcaaaggccagcctattcgcatcatgtggtcccagcgagacccaggactt
cgcaagtcaggtgtgggcaacatcttcatcaagaacctggaggactccattgacaacaag
gctttatatgataccttctccacctttgggaacatcctctcttgcaaggtagaggatgaa
gggtgtacgtctttgggtagatcggtgtcaactacctgcctggtggcgtgtgacgagcat
ggctcccggggtttcggctttgtccattttgagacccatgaggccgcacagcaggccatc
aacaccatgaatgggatgctgctgaatgaccgcaaagtctttgtgggtcacttcaagtct
cgacgggagcgggaggcggagctgggggcgcgggccctggagttcaccaacatctacgtg
aagaacctcccggtggatgtggacgagcaaggcctgcaggacctcttctcccagtttggg
aaaatgctgagtgtgaaggtgatgagggacaacagcggccactcgcggtgctttggcttt
gtcaactttgagaagcatgaggaagcccagaaggccgtggtccatatgaacgggaaggag
gtgagcgggcggctgctgtacgcgggccgggcccaaaagcgcgtggagcggcagaatgaa
ctgaagcgcaggtttgagcagatgaagcaggaccggctgaggcgttaccagggtgtgaac
ttgtatgtgaagaatctggacgactccattgatgacgacaaactgaggaaagagttctct
ccctatggagtaattaccagtgcgaaggtgatgacagagggtggccacagcaaggggttt
ggctttgtgtgtttttcctccccagaagaggcgacaaaggccgtgacagagatgaacggg
cgcatcgtgggcaccaagccactctacgtggcactggcccagcgcaaagaggagcggaag
gccatcttgaccaaccagtacatgcagcgcctctccaccatgcggaccctgagcaacccc
ctcctgggctcctttcagcagccctccagctacttcctgcctgccatgccccagcctcca
gcccaggctgcatactatggctgtggcccagtgacacccacccagcctgcccccaggtgg
acatcccagccacctagaccttcctgtgcctcaatggtccggccaccagttgtgcctcgg
cgccccccggcccacatcagcagtgtcaggcaggcctccacccaggtgccacgcacggtg
cctcatacccagagagtagccaacattggtactcagaccacaggacccagtggggtagga
tgctgtacaccaggccggccgctcctgccgtgcaaatgttcctcagcagcacatagcacc
tatcgggtccaggagccggctgtgcacatcccaggacaggagcccctgaccgcgtccatg
ctggctgcggcgcccctgcatgagcaaaagcagatgattggggagcgtctctaccccctt
atccatgatgtccacacccagctggctggcaagatcacgggcatgctgctggagattgac
aactcagagctgttgctcatgctggagtctccagaatccctccatgccaaggtgacagac
agggccatgggatcttgcaagcagtggtggatgggagggttccacagaaaccctgtggat
ggaggaggatcctgtatccaggatgatagacgaggcagtggccgtgctgcaggcacacca
ggctatggagcagccgaaggcgtacatgcactgaaaccaggaggcccttttgtgtctgag
ggaggtggggacagagcaaacggtagacatgactggggtggggctcaggctctaagaaac
agaaaccctaaaggagtgctgaagtacacagagggcatatacacaagagcaggagaagtg
ttaggaactgacccatcaacagtacagtggatgatgacatggatatcacacaatggacca
gagctacaggggcccccatctgatgtgcatgcagcccctggcttgggcaccctgcagggc
aaacacccagctgcttctcggctggctaaggggttgtgtaacataattaacccttgtagg
aacgttttagggtaccttcccagggacgtacagtccaggtctttgccctctcgtgtaccg
gagcggcccagtgaaagtggctactatgacccaagcagactgggttctgctaaaaattca
ccagcaacaaatctgaccgagtcctcaaggctgctctgccactctcagcaactcactctt
cctgttctccgctccacagacctccaacctgtcttcaccatgtcctgcccacttctttgg
ctgcttttaatctgttccctgtgcagctccatcgtcttctccccaaatcctgactgctgg
catttctttactctcagtcctgggccctctcggtttctcatgccatgttctcctgagcta
tctaatttacaagcgcatcttccatttgtacccagtcgaggatga

>gi568815578r:44843112_45060333|GENSCAN_predicted_peptide_3|444_aa
MAYLCNAICMTHMVTLDPVDQALPGATTATSVPGPQCDASCMMLFAVVPFNGIALAATQG
AQSMLPPRVQGSLSSKPSTRRGRDAPGLQVSQAPPPRRGFAVGRRYSPPALAPGRCAAPH
GGGRKELPTRRPGHGMAPKFPDSVEELRAAGNESFRNGQYAEASALYGRALRVLQAQGSS
DPEEESVLYSNRAACHLKDGNCRDCIKDCTSALALVPFSIKPLLRRASAYEALEKYPMAY
VDYKTVLQIDDNVTSAVEGINRMTRALMDSLGPEWRLKLPSIPLVPVSAQKRWNSLPSEN
HKEMAKSKSKETTATKNRVPSAGDVEKARVLKEEGNELVKKGNHKKAIEKYSESLLCSNL
ESATYSNRALCYLVLKQYTEAVKDCTEALKLDGKNVKAFYRRAQAHKALKDYKSSFADIS
NLLQIEPRNGPAQKLRQEVKQNLH

>gi568815578r:44843112_45060333|GENSCAN_predicted_CDS_3|1335_bp
atggcatatttgtgtaatgccatttgcatgacccacatggtcaccctggaccccgtggat
caggccctgcctggtgccaccaccgccacttctgtgccaggcccccagtgtgatgcaagt
tgcatgatgctctttgctgtagtgccttttaatggcatagctttggcagcaactcaggga
gcccagagcatgctgccgccccgcgtgcaagggagcctaagttccaaaccgagcacgcgc
agagggcgggacgctccgggcctccaggtctcgcaggccccgccccctcgccgcgggttc
gctgttgggcggagatattcgccgccggcgcttgcgcccggaaggtgtgccgcaccacac
gggggaggaaggaaggagctcccaactcgccggcctggccacgggatggcccccaaattc
ccagactctgtggaggagctccgcgccgccggcaatgagagtttccgcaacggccagtac
gccgaggcctccgcgctctacggccgcgcgctgcgggtgctgcaggcgcaaggttcttca
gacccagaagaagaaagtgttctctactccaaccgagcagcatgtcacttgaaggatgga
aactgcagagactgcatcaaagattgcacttcagcactggccttggttcccttcagcatt
aagcccctgctgcggcgagcatctgcttatgaggctctggagaagtaccctatggcctat
gttgactataagactgtgctgcagattgatgataatgtgacgtcagccgtagaaggcatc
aacagaatgaccagagctctcatggactcgcttgggcctgagtggcgcctgaagctgccc
tcaatccccttggtgcctgtttcagctcagaagaggtggaattccttgccttcggagaac
cacaaagagatggctaaaagcaaatccaaagaaaccacagctacaaagaacagagtgcct
tctgctggggatgtggagaaagccagagttctgaaggaagaaggcaatgagcttgtaaag
aagggaaaccataagaaagctattgagaagtacagtgaaagcctcttgtgtagtaacctg
gaatctgccacgtacagcaacagagcactctgctatttggtcctgaagcagtacacagaa
gcagtgaaggactgcacagaagccctcaagctggatggaaagaacgtgaaggcattctac
agacgggctcaagcccacaaagcactcaaggactataaatccagctttgcagacatcagc
aacctcctacagattgagcctaggaatggtcctgcacagaagttgcggcaggaagtgaag
cagaacctacactaa

>gi568815578r:44843112_45060333|GENSCAN_predicted_peptide_4|486_aa
MASFITDVQCLPNGLHILLSSSEPDIGRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSV
YKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY
CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAK
LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY
ADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA
KGVSILRDLINEAMDVKLKRQESQQREVDQDDEENSEEDEMDSGTMVRAVGDEMGTVRVA
STMTDGANTMIEHDDTLPSQLGTMVINAEDEEEEGTMKKMMFLHFLYKGTGSERLRLLLV
HGHMARRDETMQPAKPSFLEYFEQKEKENQINSFGKSVPGPLKNSSDWKIPQDGDYEFGL
NIKDTH

>gi568815578r:44843112_45060333|GENSCAN_predicted_CDS_4|1461_bp
atggcatcttttattactgatgttcagtgtcttcctaatggtcttcacatcctcctcagc
tcttcagaacctgacattgggaggcagctgaaaaagttggatgaagatagtttaaccaaa
caaccagaagaagtatttgatgtcttagagaaacttggagaagggtcctatggcagcgta
tacaaagctattcataaagagaccggccagattgttgctattaagcaagttcctgtggaa
tcagacctccaggagataatcaaagaaatctctataatgcagcaatgtgacagccctcat
gtagtcaaatattatggcagttattttaagaacacagacttatggatcgttatggagtac
tgtggggctggttctgtatctgatatcattcgattacgaaataaaacgttaacagaagat
gaaatagctacaatattacaatcaactcttaagggacttgaataccttcattttatgaga
aaaatacaccgagatatcaaggcaggaaatattttgctaaatacagaaggacatgcaaaa
cttgcagattttggggtagcaggtcaacttacagataccatggccaagcggaatacagtg
ataggaacaccattttggatggctccagaagtgattcaggaaattggatacaactgtgta
gcagacatctggtccctgggaataactgccatagaaatggctgaaggaaagcccccttat
gctgatatccatccaatgagggcaatcttcatgattcctacaaatcctcctcccacattc
cgaaaaccagagctatggtcagataactttacagattttgtgaaacagtgtcttgtaaag
agccctgagcagagggccacagccactcagctcctgcagcacccatttgtcaggagtgcc
aaaggagtgtcaatactgcgagacttaattaatgaagccatggatgtgaaactgaaacgc
caggaatcccagcagcgggaagtggaccaggacgatgaagaaaactcagaagaggatgaa
atggattctggcacgatggttcgagcagtgggtgatgagatgggcactgtccgagtagcc
agcaccatgactgatggagccaatactatgattgagcacgatgacacgttgccatcacaa
ctgggcaccatggtgatcaatgcagaggatgaggaagaggaaggaactatgaaaaagatg
atgtttctccactttctctataaaggaacaggttcagagagattgagattgttgcttgtt
catggtcacatggctagaagggatgagaccatgcagcctgcgaaaccatcctttcttgaa
tattttgaacaaaaagaaaaggaaaaccagatcaacagctttggcaagagtgtacctggt
ccactgaaaaattcttcagattggaaaataccacaggatggagactacgagtttggttta
aatatcaaggatactcactaa

>gi568815578r:44843112_45060333|GENSCAN_predicted_peptide_5|117_aa
MGDGNVGVRTIDTVAQRQPRTWSFCDLADSAYPNVLGAQLTWPLKPPHGSCVLKASWPSQ
GPHPATHRMASNPLDGLLSASTPEGKRRLAQRLWISSSLVKPANSSVIPWAEPHLLQ

>gi568815578r:44843112_45060333|GENSCAN_predicted_CDS_5|354_bp
atgggagatggcaatgtgggtgtgaggaccatcgacactgtggcccagcgacagcctaga
acgtggtctttctgtgaccttgcagactcagcctatcctaacgttttgggagctcagctg
acatggccactaaagcctccacatggctcttgtgttctaaaggcctcctggcccagccag
ggcccacaccctgctacccaccggatggccagtaacccactggatggcctgctctctgcc
agcactccagaaggtaaacgacggcttgcccagagactttggatcagctccagtcttgtc
aaaccagcaaactcctctgtgattccatgggctgaaccacatcttctccaatga