GENSCAN 1.0	Date run:  7-Nov-116	Time: 19:35:46

Sequence gi568815596f:47269506_47486610 : 217105 bp : 44.05% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2200   2219   20  0  2   95  111   -10 0.160   1.68
 1.02 Intr +   7791   7847   57  0  0   95   83    39 0.073   2.10
 1.03 Intr +  36972  37122  151  0  1   67   99    55 0.064   4.66
 1.04 Intr +  56226  56319   94  2  1   80   93    69 0.293   6.14
 1.05 Term +  59676  59698   23  1  2   85   44    37 0.318  -2.53
 1.06 PlyA +  62589  62594    6                               1.05

 2.00 Prom +  65719  65758   40                              -4.66
 2.01 Init + 100001 100076   76  1  1  100  100   180 0.702  19.65
 2.02 Intr + 103958 104065  108  0  0   63   75    77 0.808   4.16
 2.03 Intr + 104303 104543  241  0  1   46   75   180 0.441   9.11
 2.04 Intr + 105729 105794   66  0  0   95  105    69 0.936   7.32
 2.05 Intr + 107509 107572   64  1  1   52   56    12 0.857  -6.88
 2.06 Intr + 109448 109549  102  1  0   62   76    48 0.698   1.37
 2.07 Intr + 110264 110464  201  1  0  110  105   176 0.925  20.98
 2.08 Intr + 115661 115705   45  1  0   90   84    24 0.635   0.81
 2.09 Term + 118820 118921  102  1  0   81   49   115 0.982   5.18
 2.10 PlyA + 122002 122007    6                               1.05

 3.00 Prom + 130386 130425   40                              -6.56
 3.01 Init + 133687 133897  211  0  1   96   94   375 0.913  37.85
 3.02 Intr + 138896 139050  155  0  2   88   86    59 0.986   5.49
 3.03 Intr + 140589 140867  279  2  0   53  115   173 0.882  14.17
 3.04 Intr + 142909 143055  147  0  0   65   88   121 0.999  10.23
 3.05 Intr + 144764 144913  150  1  0   49   98    52 0.766   2.66
 3.06 Intr + 146791 146924  134  0  2   97   87   112 0.999  11.44
 3.07 Intr + 160237 160436  200  1  2   26   87   154 0.879   8.09
 3.08 Intr + 176043 176152  110  1  2   88   85    67 0.731   6.40
 3.09 Intr + 182401 182421   21  0  0  137   72    13 0.501   2.34
 3.10 Intr + 193526 193649  124  1  1   98   91    64 0.923   7.86
 3.11 Intr + 197153 197303  151  0  1   34   41   147 0.995   3.82
 3.12 Intr + 201460 201557   98  1  2   75   97    76 0.976   6.85
 3.13 Intr + 205520 205765  246  0  0   75   58   175 0.981  10.63
 3.14 Intr + 206862 207066  205  1  1   77  111    70 0.981   6.46
 3.15 Intr + 208767 209014  248  0  2   52   95    82 0.958   2.40
 3.16 Intr + 211191 211366  176  1  2  104   68    75 0.953   6.76
 3.17 Term + 213274 213444  171  0  0   56   48   107 0.913   1.33
 3.18 PlyA + 213695 213700    6                               1.05

 4.00 Prom + 214181 214220   40                              -3.86
 4.01 Init + 214987 215071   85  0  1   76  115    43 0.134   6.78
 4.02 Term + 215945 216036   92  0  2   38   48    77 0.110  -3.42
 4.03 PlyA + 217044 217049    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:47269506_47486610|GENSCAN_predicted_peptide_1|114_aa
MEGEGSRFGISGSLQLPEEKPYRFLRAPVLVALGQRPAAQEKPSSCWTSGPNCEWFLTHH
PLLQHAWKMPLGEKEQRVYGDRMKYHSGSWMAVLKQVLHMRTFSPAHDVDIEDG

>gi568815596f:47269506_47486610|GENSCAN_predicted_CDS_1|345_bp
atggagggagagggctccagatttggcatttcaggatctctgcagttacctgaagagaaa
ccatacagatttctaagggctcctgtgctcgtggccctaggacagcgacctgcagcccaa
gagaaaccatcctcctgttggacttctgggcccaattgcgaatggttccttactcaccac
ccactacttcaacatgcctggaaaatgccactaggggagaaagaacagagggtttatggg
gatcgtatgaagtaccacagtggttcctggatggcagtccttaaacaggtgctacacatg
aggacgttttcaccagcccacgatgtggacatagaagatggatag

>gi568815596f:47269506_47486610|GENSCAN_predicted_peptide_2|334_aa
MAPPQVLAFGLLLAAATATFAAAQEECVCENYKLAVNCFVNNNRQCQCTSVGAQNTVICS
KLAAKCLVMKAEMNGSKLGRRAKPEGALQNNDGLYDPDCDESGLFKAKQCNGTSMCWCVN
TAGVRRTDKDTEITCSERVRTYWIIIELKHKAREKPYDSKSLRTALQKEITTRYQLDPKF
ITSILYENNVITIDLVQNSSQKTQNDVDIADVAYYFEKDVKGESLFHSKKMDLTVNGEQL
DLDPGQTLIYYVDEKAPEFSMQGLKAGVIAVIVVVVIAVVAGIVVLVISRKKRMAKYEKA
EAQKRPGEATPCCKSQIMEQPWMLQEPVKPGHQS

>gi568815596f:47269506_47486610|GENSCAN_predicted_CDS_2|1005_bp
atggcgcccccgcaggtcctcgcgttcgggcttctgcttgccgcggcgacggcgactttt
gccgcagctcaggaagaatgtgtctgtgaaaactacaagctggccgtaaactgctttgtg
aataataatcgtcaatgccagtgtacttcagttggtgcacaaaatactgtcatttgctca
aagctggctgccaaatgtttggtgatgaaggcagaaatgaatggctcaaaacttgggaga
agagcaaaacctgaaggggccctccagaacaatgatgggctttatgatcctgactgcgat
gagagcgggctctttaaggccaagcagtgcaacggcacctccatgtgctggtgtgtgaac
actgctggggtcagaagaacagacaaggacactgaaataacctgctctgagcgagtgaga
acctactggatcatcattgaactaaaacacaaagcaagagaaaaaccttatgatagtaaa
agtttgcggactgcacttcagaaggagatcacaacgcgttatcaactggatccaaaattt
atcacgagtattttgtatgagaataatgttatcactattgatctggttcaaaattcttct
caaaaaactcagaatgatgtggacatagctgatgtggcttattattttgaaaaagatgtt
aaaggtgaatccttgtttcattctaagaaaatggacctgacagtaaatggggaacaactg
gatctggatcctggtcaaactttaatttattatgttgatgaaaaagcacctgaattctca
atgcagggtctaaaagctggtgttattgctgttattgtggttgtggtgatagcagttgtt
gctggaattgttgtgctggttatttccagaaagaagagaatggcaaagtatgagaaggct
gaggcccagaagcgtcctggagaagccaccccatgctgcaagagccagatcatggagcag
ccctggatgctgcaggagcctgtcaagccaggacaccagagctag

>gi568815596f:47269506_47486610|GENSCAN_predicted_peptide_3|941_aa
MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT
QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
YKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD
LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVNSVNILVENHEFLVKPS
FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVL
RNNKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQ
TLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPN
DVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVG
AGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATK
IGAFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAEL
ANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQ
MPFTEMSEENITIKLKQLKAEVIAKNNSFVNEIISRIKVTT

>gi568815596f:47269506_47486610|GENSCAN_predicted_CDS_3|2826_bp
atggcggtgcagccgaaggagacgctgcagttggagagcgcggccgaggtcggcttcgtg
cgcttctttcagggcatgccggagaagccgaccaccacagtgcgccttttcgaccggggc
gacttctatacggcgcacggcgaggacgcgctgctggccgcccgggaggtgttcaagacc
cagggggtgatcaagtacatggggccggcaggagcaaagaatctgcagagtgttgtgctt
agtaaaatgaattttgaatcttttgtaaaagatcttcttctggttcgtcagtatagagtt
gaagtttataagaatagagctggaaataaggcatccaaggagaatgattggtatttggca
tataaggcttctcctggcaatctctctcagtttgaagacattctctttggtaacaatgat
atgtcagcttccattggtgttgtgggtgttaaaatgtccgcagttgatggccagagacag
gttggagttgggtatgtggattccatacagaggaaactaggactgtgtgaattccctgat
aatgatcagttctccaatcttgaggctctcctcatccagattggaccaaaggaatgtgtt
ttacccggaggagagactgctggagacatggggaaactgagacagataattcaaagagga
ggaattctgatcacagaaagaaaaaaagctgacttttccacaaaagacatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagagcagatgaatagtgctgtattgccagaa
atggagaatcaggttgcagtttcatcactgtctgcggtaatcaagtttttagaactctta
tcagatgattccaactttggacagtttgaactgactacttttgacttcagccagtatatg
aaattggatattgcagcagtcagagcccttaacctttttcagggttctgttgaagatacc
actggctctcagtctctggctgccttgctgaataagtgtaaaacccctcaaggacaaaga
cttgttaaccagtggattaagcagcctctcatggataagaacagaatagaggagagattg
aatttagtggaagcttttgtagaagatgcagaattgaggcagactttacaagaagattta
cttcgtcgattcccagatcttaaccgacttgccaagaagtttcaaagacaagcagcaaac
ttacaagattgttaccgactctatcagggtataaatcaactacctaatgttatacaggct
ctggaaaaacatgaaggaaaacaccagaaattattgttggcagtttttgtgactcctctt
actgatcttcgttctgacttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtaaacagtgttaacatcctggtggaaaaccatgaattccttgtaaaaccttca
tttgatcctaatctcagtgaattaagagaaataatgaatgacttggaaaagaagatgcag
tcaacattaataagtgcagccagagatcttggcttggaccctggcaaacagattaaactg
gattccagtgcacagtttggatattactttcgtgtaacctgtaaggaagaaaaagtcctt
cgtaacaataaaaactttagtactgtagatatccagaagaatggtgttaaatttaccaac
agcaaattgacttctttaaatgaagagtataccaaaaataaaacagaatatgaagaagcc
caggatgccattgttaaagaaattgtcaatatttcttcaggctatgtagaaccaatgcag
acactcaatgatgtgttagctcagctagatgctgttgtcagctttgctcacgtgtcaaat
ggagcacctgttccatatgtacgaccagccattttggagaaaggacaaggaagaattata
ttaaaagcatccaggcatgcttgtgttgaagttcaagatgaaattgcatttattcctaat
gacgtatactttgaaaaagataaacagatgttccacatcattactggccccaatatggga
ggtaaatcaacatatattcgacaaactggggtgatagtactcatggcccaaattgggtgt
tttgtgccatgtgagtcagcagaagtgtccattgtggactgcatcttagcccgagtaggg
gctggtgacagtcaattgaaaggagtctccacgttcatggctgaaatgttggaaactgct
tctatcctcaggtctgcaaccaaagattcattaataatcatagatgaattgggaagagga
acttctacctacgatggatttgggttagcatgggctatatcagaatacattgcaacaaag
attggtgctttttgcatgtttgcaacccattttcatgaacttactgccttggccaatcag
ataccaactgttaataatctacatgtcacagcactcaccactgaagagaccttaactatg
ctttatcaggtgaagaaaggtgtctgtgatcaaagttttgggattcatgttgcagagctt
gctaatttccctaagcatgtaatagagtgtgctaaacagaaagccctggaacttgaggag
tttcagtatattggagaatcgcaaggatatgatatcatggaaccagcagcaaagaagtgc
tatctggaaagagagcaaggtgaaaaaattattcaggagttcctgtccaaggtgaaacaa
atgccctttactgaaatgtcagaagaaaacatcacaataaagttaaaacagctaaaagct
gaagtaatagcaaagaataatagctttgtaaatgaaatcatttcacgaataaaagttact
acgtga

>gi568815596f:47269506_47486610|GENSCAN_predicted_peptide_4|58_aa
MQIREMQVKTTMSYNFTLITIVKIKKSDVHTLEMLLPIVLRDVYKNVPNTSTLETTHQ

>gi568815596f:47269506_47486610|GENSCAN_predicted_CDS_4|177_bp
atgcagatcagggaaatgcaagtcaaaaccacaatgagctacaacttcacactgattacg
atagttaaaatcaaaaagtcagatgtgcatactctggagatgcttttgcccattgtgctg
cgagatgtatacaagaatgttcctaatacctccacactggaaacaactcatcagtga