GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:08:29

Sequence gi568815578f:35072155_35276810 : 204656 bp : 45.06% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    375    370    6                               1.05
 1.04 Term -   4031   3208  824  0  2  -62   43   377 0.042  11.46
 1.03 Intr -   4411   4249  163  1  1   77   71    36 0.054   0.35
 1.02 Intr -   6020   5892  129  2  0   87   88    71 0.067   7.89
 1.01 Init -  20627  20460  168  2  0  109   96   162 0.957  16.64
 1.00 Prom -  25299  25260   40                              -2.56

 2.07 PlyA -  26143  26138    6                               1.05
 2.06 Term -  43779  43279  501  0  0   44   41   469 0.927  32.28
 2.05 Intr -  46565  46444  122  0  2   33   98   115 0.285   7.21
 2.04 Intr -  51880  51736  145  1  1  109   99   242 0.999  27.26
 2.03 Intr -  54221  54097  125  0  2   77   91   217 0.998  21.20
 2.02 Intr -  59629  59488  142  1  1  125   66   237 0.901  25.13
 2.01 Init -  62775  62584  192  0  0   54   82   183 0.785  13.27
 2.00 Prom -  64109  64070   40                              -2.16

 3.06 PlyA -  66154  66149    6                              -0.45
 3.05 Term -  66346  66249   98  2  2  131   43    31 0.630   1.03
 3.04 Intr -  70324  70219  106  1  1   88   94   118 0.977  12.19
 3.03 Intr -  72864  72825   40  2  1   76  119    33 0.916   3.43
 3.02 Intr -  74781  74671  111  2  0  103   72   194 0.942  18.79
 3.01 Init -  75104  74998  107  2  2   32   66   178 0.945   7.72
 3.00 Prom -  78170  78131   40                              -7.36

 4.00 Prom +  79516  79555   40                              -8.46
 4.01 Init +  81647  81719   73  1  1   82   78    61 0.761   3.73
 4.02 Intr +  90514  90673  160  2  1   68   72    98 0.375   5.25
 4.03 Intr +  92583  92673   91  0  1   74   51    15 0.291  -3.60
 4.04 Intr +  99935 100070  136  1  1  113  101   105 0.998  14.44
 4.05 Intr + 102548 102799  252  0  0   68   76   371 0.984  31.31
 4.06 Intr + 104014 104292  279  2  0   73   86   419 0.983  37.65
 4.07 Term + 104544 104659  116  1  2   90   32   163 0.958   9.63
 4.08 PlyA + 105015 105020    6                               1.05

 5.00 Prom + 108277 108316   40                              -5.16
 5.01 Init + 111296 111368   73  1  1   80   65   108 0.967   8.93
 5.02 Term + 117489 117517   29  1  2   51   41    68 0.399  -3.36
 5.03 PlyA + 117710 117715    6                               1.05

 6.00 Prom + 124236 124275   40                              -5.66
 6.01 Init + 126850 127320  471  0  0  114   61   124 0.807   7.83
 6.02 Term + 136255 136257    3  0  0  131   48     0 0.468  -2.80
 6.03 PlyA + 136823 136828    6                               1.05

 7.05 PlyA - 140034 140029    6                               1.05
 7.04 Term - 140322 140309   14  1  2  127   28    16 0.195  -2.14
 7.03 Intr - 146000 145844  157  2  1   56   91    51 0.070   1.78
 7.02 Intr - 152798 152651  148  1  1   78   46    33 0.119  -1.66
 7.01 Init - 154871 154489  383  2  2   61   56   426 0.927  31.04
 7.00 Prom - 161919 161880   40                               0.64

 8.00 Prom + 162303 162342   40                              -4.96
 8.01 Init + 163839 164039  201  2  0   54   87    63 0.388   1.13
 8.02 Intr + 174686 174834  149  1  2  108   54   180 0.357  15.63
 8.03 Intr + 179751 179867  117  0  0   92   49    59 0.272   1.98
 8.04 Intr + 182296 182600  305  1  2   91  103   256 0.965  23.63
 8.05 Intr + 191637 191798  162  1  0  105   66   303 0.977  29.75
 8.06 Intr + 195051 195265  215  1  2   82   97   226 0.935  21.33
 8.07 Intr + 197606 197744  139  1  1  125   90   238 0.983  27.74
 8.08 Intr + 199415 199685  271  0  1   97   74   405 0.695  36.60
 8.09 Term + 202035 202455  421  0  1   85   53   807 0.698  71.66

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:35072155_35276810|GENSCAN_predicted_peptide_1|427_aa
MAAAPVAAGSGAGRGRRSAATVAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET
FLTERDKQSKWSGIPQLLLKLHTTSHLHSDFVECQNILKPLLVIPRQTGSGVDLQQTLTD
LQLRVLTVRRKTNKQKGHPHQNPICMSPSSKTKEAKNLDKRLDEWLTRINSIEKTLNDLM
ELNTMARKLRDACTSFSSQFDQVEERVSVIEDQMNEMKREEKFREKRIKRNKQSLQEIWD
CVKRPNLRLIGVPESDGENGTKLENTLQDIIQENFPNLARQVNIQIQEIQRTPQRYSSRR
GTPRHIIVRFTKVEIKEKILRAAREKGRVTHKGKPIRLTAVLLAETLQARREWGPIFNIL
KEKNFQPRVSYPAKLSFISEGEVKSFTDKQMLRDFVTTRPALQELLKEALNMERNNRYQL
LQKHAKL

>gi568815578f:35072155_35276810|GENSCAN_predicted_CDS_1|1284_bp
atggcggcggcgccggtagcggctgggtctggagccggccgagggagacggtcggcagcc
acagtggcggcttggggcggatggggcggccggccgcggcctggtaacattctgctgcag
ctgcggcagggccagctgaccggccggggcctggtccgggcggtgcagttcactgagact
tttttgacggagagggacaaacaatccaagtggagtggaattcctcagctgctcctcaag
ctgcacaccaccagccacctccacagtgactttgttgagtgtcaaaacatcctcaagcct
ctgctggtgatacccagacaaacagggtctggagtggacctccagcaaactctgacagac
ctgcagctgagggtcctgactgttagaaggaaaactaacaaacagaaaggacatccacac
caaaaccccatctgtatgtcaccatcatcaaagaccaaagaagctaaaaaccttgacaaa
agattagacgaatggctaactagaataaacagcatagaaaagaccttaaatgacctgatg
gagctgaacaccatggctcgaaaactacgtgacgcatgcacaagcttcagtagccaattc
gatcaagtggaagaaagggtatcagtgattgaagatcaaatgaatgaaatgaagcgagaa
gagaagtttagagaaaaaagaataaaaagaaacaaacaaagcctccaagaaatatgggac
tgtgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgacggggagaatgga
accaagttggaaaacactcttcaggatattatccaggagaacttccccaatctagcaagg
caggtcaacattcaaattcaggaaatacagagaacgccacaaagatactcctcgaggaga
ggaactccaagacacataattgtcagattcaccaaagttgaaattaaggaaaaaatatta
agggcagccagagagaaaggtcgggttacccacaaagggaagcccatcagactaacagcg
gttctcttggcagaaactctacaagccagaagagagtgggggccaatattcaacattctt
aaagaaaagaattttcaacccagagtttcatatccagccaaactaagcttcataagtgaa
ggagaagtaaaatcctttacagacaagcaaatgctgagagattttgtcaccaccaggcct
gccttacaagagctcctgaaggaagcgctaaacatggaaaggaacaaccgataccaacta
ctgcaaaaacatgccaaattgtaa

>gi568815578f:35072155_35276810|GENSCAN_predicted_peptide_2|408_aa
MPYGTVNLLHGVNPGETPVTCTAGIGTFIVEFATLSSLTGDPVFEDVARVALMRLWESRS
DIGLVGNHIDVLTGKWVAQDAGIGAGVDSYFEYLVKGAILLQDKKLMAMFLEYNKAIRNY
TRFDDWYLWVQMYKGTVSMPVFQSLEAYWPGLQSLIGDIDNAMRTFLNYYTVWKQFGGLP
EFYNIPQGYTVEKREGYPLRPELIESAMYLYRATGDPTLLELGRDAVESIEKISKVECGF
ATIKDLRDHKLDNRMESFFLAETVKYLYLLFDPTNFIHNNGSTFDAVITPYGECILGAGG
YIFNTEAHPIDPAALHCCQRLKEEQWEVEDLMREFYSLKRSRSKFQKNTVSSGPWEPPAR
PGTLFSPENHDQARERKPAKQKVPLLSCPSQPFTSKLALLGQVFLDSS

>gi568815578f:35072155_35276810|GENSCAN_predicted_CDS_2|1227_bp
atgccatatggaacagtgaacttacttcatggcgtgaacccaggagagacccctgtcacc
tgtacggcagggattgggaccttcattgttgaatttgccaccctgagcagcctcactggt
gacccggtgttcgaagatgtggccagagtggctttgatgcgcctctgggagagccggtca
gatatcgggctggtcggcaaccacattgatgtgctcactggcaagtgggtggcccaggac
gcaggcatcggggctggcgtggactcctactttgagtacttggtgaaaggagccatcctg
cttcaggataagaagctcatggccatgttcctagagtataacaaagccatccggaactac
acccgcttcgatgactggtacctgtgggttcagatgtacaaggggactgtgtccatgcca
gtcttccagtccttggaggcctactggcctggtcttcagagcctcattggagacattgac
aatgccatgaggaccttcctcaactactacactgtatggaagcagtttggggggctcccg
gaattctacaacattcctcagggatacacagtggagaagcgagagggctacccacttcgg
ccagaacttattgaaagcgcaatgtacctctaccgtgccacgggggatcccaccctccta
gaactcggaagagatgctgtggaatccattgaaaaaatcagcaaggtggagtgcggattt
gcaacaatcaaagatctgcgagaccacaagctggacaaccgcatggagtcgttcttcctg
gccgagactgtgaaatacctctacctcctgtttgacccaaccaacttcatccacaacaat
gggtccaccttcgacgcggtgatcaccccctatggggagtgcatcctgggggctgggggg
tacatcttcaacacagaagctcaccccatcgaccctgccgccctgcactgctgccagagg
ctgaaggaagagcagtgggaggtggaggacttgatgagggaattctactctctcaaacgg
agcaggtcgaaatttcagaaaaacactgttagttcggggccatgggaacctccagcaagg
ccaggaacactcttctcaccagaaaaccatgaccaggcaagggagaggaagcctgccaaa
cagaaggtcccacttctcagctgccccagtcagcccttcacctccaagttggcattactg
ggacaggttttcctagactcctcataa

>gi568815578f:35072155_35276810|GENSCAN_predicted_peptide_3|153_aa
MPFRLLIPLGLLCALLPQHHGAPGPDGSAPDPAHYRERVKAMFYHAYDSYLENAFPFDEL
RPLTCDGHDTWGSFSLTLIDALDTLLILGNVSEFQRVVEVLQDSVDFDIDVNASVFETNI
RGMTGDWETDRVTNGMSMGFGIKDTQPYHLLDG

>gi568815578f:35072155_35276810|GENSCAN_predicted_CDS_3|462_bp
atgcctttccggctgctcatcccgctcggcctcctgtgcgcgctgctgcctcagcaccat
ggtgcgccaggtcccgacggctccgcgccagatcccgcccactacagggagcgagtcaag
gccatgttctaccacgcctacgacagctacctggagaatgcctttcccttcgatgagctg
cgacctctcacctgtgacgggcacgacacctggggcagtttttctctgactctaattgat
gcactggacaccttgctgattttggggaatgtctcagaattccaaagagtggttgaagtg
ctccaggacagcgtggactttgatattgatgtgaacgcctctgtgtttgaaacaaacatt
cgaggtatgacaggtgactgggagacagacagagtgacaaatggaatgagcatgggcttt
ggaatcaaagatactcagccctaccacctactagatgggtga

>gi568815578f:35072155_35276810|GENSCAN_predicted_peptide_4|368_aa
MASRPVREGGGGVSPPPGQPPRLGGSQFLASKGTKLETENEFEELTEVDFRRWVITNSSE
LKEHVLTQCKEAKNLEKRDMDEAENHHSQQTNTKTENQTLHVITHKWETAASGARSRPEP
GTQVRSLNFRMLTTLLPILLLSGWAFCSQDASDGLQRLHMLQISYFRDPYHVWYQGNASL
GGHLTHVLEGPDTNTTIIQLQPLQEPESWARTQSGLQSYLLQFHGLVRLVHQERTLAFPL
TIRCFLGCELPPEGSRAHVFFEVAVNGSSFVSFRPERALWQADTQVTSGVVTFTLQQLNA
YNRTRYELREFLEDTCVQYVQKHISAENTKGSQTSRSYTSLVLGVLVGSFIIAGVAVGIF
LCTGGRRC

>gi568815578f:35072155_35276810|GENSCAN_predicted_CDS_4|1107_bp
atggccagccgccccgtccgggagggaggtgggggggtcagccctccgcccggccagccg
ccccgtctgggaggatcacaattccttgccagcaagggaacaaaactggaaacagagaat
gagtttgaagaattgacagaagtagacttcagaaggtgggtaataacaaactcctccgag
ctaaaggagcatgttctaacccaatgcaaggaagctaagaaccttgaaaaaagggacatg
gatgaggctgaaaaccatcattctcagcaaactaacacaaaaacagaaaaccaaacactg
catgttatcactcataagtgggagactgcagccagcggagcccgcagccggcccgagcca
ggaacccaggtccggagcctcaacttcaggatgttgacaacattgctgccgatactgctg
ctgtctggctgggccttttgtagccaagacgcctcagatggcctccaaagacttcatatg
ctccagatctcctacttccgcgacccctatcacgtgtggtaccagggcaacgcgtcgctg
gggggacacctaacgcacgtgctggaaggcccagacaccaacaccacgatcattcagctg
cagcccttgcaggagcccgagagctgggcgcgcacgcagagtggcctgcagtcctacctg
ctccagttccacggcctcgtgcgcctggtgcaccaggagcggaccttggcctttcctctg
accatccgctgcttcctgggctgtgagctgcctcccgagggctctagagcccatgtcttc
ttcgaagtggctgtgaatgggagctcctttgtgagtttccggccggagagagccttgtgg
caggcagacacccaggtcacctccggagtggtcaccttcaccctgcagcagctcaatgcc
tacaaccgcactcggtatgaactgcgggaattcctggaggacacctgtgtgcagtatgtg
cagaaacatatttccgcggaaaacacgaaagggagccaaacaagccgctcctacacttcg
ctggtcctgggcgtcctggtgggcagtttcatcattgctggtgtggctgtaggcatcttc
ctgtgcacaggtggacggcgatgttaa

>gi568815578f:35072155_35276810|GENSCAN_predicted_peptide_5|33_aa
MIESFLRPHQKKMLVPCFLYILQKWGITEPADM

>gi568815578f:35072155_35276810|GENSCAN_predicted_CDS_5|102_bp
atgattgaaagcttcctgaggcctcaccagaagaagatgctggtgccatgcttcctgtac
atcctgcagaagtggggcatcacggaacctgccgacatgtga

>gi568815578f:35072155_35276810|GENSCAN_predicted_peptide_6|157_aa
MPSQPPRTFIAKDNSLPGFKASKHRLTLLLGDNAAGDFKLKPMSMYHYENPRAIKNDVNS
LPMLHKWNNKAWMTAYLFIAWFTGYFKPTVETYCSGKKIPLKILLLIGNARGHPRALMEM
YKEIQVVFMLANTSFILQSMDQGVTSIFKSYLRNTGQ

>gi568815578f:35072155_35276810|GENSCAN_predicted_CDS_6|474_bp
atgcccagccagccacctaggacttttatagctaaagataactcattgcctggattcaaa
gcttcaaagcacaggctaactctcttactaggggataatgcagctggtgattttaagttg
aagccaatgtccatgtaccattatgaaaatcctagggccattaagaatgatgtgaattct
ctgcctatgctccataaatggaacaacaaagcctggatgacagcatatctgttcatagca
tggtttactggatattttaagcctactgttgagacctactgctcaggaaaaaagattcct
ctcaaaatattactactcattggcaatgcacgtggtcacccaagagccctgatggagatg
tacaaggagattcaggttgttttcatgcttgctaacacatcattcattctgcagtccatg
gatcaaggagtaacttcgattttcaagtcttatttaagaaatacaggccagtga

>gi568815578f:35072155_35276810|GENSCAN_predicted_peptide_7|233_aa
MPRARAPAPRASPTCPAKGASASSARATATATAARFPAPAAAAAARAAPGRQQSAGSSSS
SSRPGTRQRLQRGAWPGGGGGGGGPGAARPPRLLGIPAAGPAPGPPAFAAAAAASAASAP
PPPRAPPRMGVRKETDLRDNGHTRRGKGVWSDGKSRKMDGSIFTETESSCGGTGLKETQP
WAHLAQPMGQQEQQLFLQEVHLHSLHLQEPAHVQEPPVVQEQLGSISSRGPAT

>gi568815578f:35072155_35276810|GENSCAN_predicted_CDS_7|702_bp
atgccccgagcccgcgccccggccccgcgcgccagccccacctgcccggcgaagggcgcc
tccgcctcgtccgcccgcgccaccgccaccgccaccgctgcccggttccctgcccccgcc
gccgccgccgccgcccgcgcggcgcccgggaggcagcagagcgcgggcagcagcagcagc
agcagccgcccagggacccgccagcggctccagcgcggggcctggcccggcggcggcggc
ggcggcggcggccccggcgcggcgcggccgccccggctcctcggcatcccggcggcgggg
cccgcgcccggcccgcctgccttcgccgccgccgccgccgcctcggccgccagcgcgccc
ccgcctccgcgcgccccgccccggatgggggtgagaaaagagacagatttaagagacaat
gggcatacaagaagagggaaaggagtttggagtgatggcaaatcgagaaagatggatggt
agcatcttcacagaaacggagtcctcatgtggaggaactggcttgaaggagacacagccc
tgggcacacttggcacagcccatggggcagcaggagcagcagctcttcttgcaggaggtg
catttgcactctttgcacttgcaggagccggcgcacgtgcaggagccaccagtggtgcag
gagcagttggggtccatttcaagccgcggacctgctacgtaa

>gi568815578f:35072155_35276810|GENSCAN_predicted_peptide_8|659_aa
MVIIWLVVASWEWAKDILQSAREFPLVHLPPTQEPMAANRQCCAIKVFVKKLSWALWAIL
RALFRLANWLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMK
KPRCGVPDHPHLSRRRRNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAFDVW
QKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD
THFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFKLP
QDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPSERKHERQPRPPRPPLGDRPSTPGT
KPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDAAYER
ADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFFKGER
YWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGCTACALLFTLPQSRCRKCLGVV
MLGCISADYTYFYKGRDYWKFDNQKLSVEPGYPRNILRDWMGCNQKEVERRKERRLPQDD
VDIMVTINDVPGSVNAVAVVIPCILSLCILVLVYTIFQFKNKTGPQPVTYYKRPVQEWV

>gi568815578f:35072155_35276810|GENSCAN_predicted_CDS_8|1980_bp
atggtgatcatctggcttgtggtggcctcctgggagtgggccaaggacattctgcagagc
gccagggaattcccgctagtgcacttaccacccactcaagagccgatggcagccaacagg
caatgctgcgccattaaggtgtttgtcaagaagctaagctgggcattgtgggcgatcctg
agggccctttttagattggctaactggttaaagtcctatggctatctgcttccctatgac
tcacgggcatctgcgctgcactcagcgaaggccttgcagtcggcagtctccactatgcag
cagttttacgggatcccggtcaccggtgtgttggatcagacaacgatcgagtggatgaag
aaaccccgatgtggtgtccctgatcacccccacttaagccgtaggcggagaaacaagcgc
tatgccctgactggacagaagtggaggcaaaaacacatcacctacagcattcacaactat
accccaaaagtgggtgagctagacacgcggaaagctattcgccaggctttcgatgtgtgg
cagaaggtgaccccactgacctttgaagaggtgccataccatgagatcaaaagtgaccgg
aaggaggcagacatcatgatcttttttgcttctggtttccatggcgacagctccccattt
gatggagaagggggattcctggcccatgcctacttccctggcccagggattggaggagac
acccactttgactccgatgagccatggacgctaggaaatgccaaccatgacgggaacgac
ctcttcctggtggctgtgcatgagctgggccacgcgctgggactggagcactccagcgac
cccagcgccatcatggcgcccttctaccagtacatggagacgcacaacttcaagctgccc
caggacgatctccagggcatccagaagatctatggacccccagccgagcctctggagccc
acaaggccactccctacactccccgtccgcaggatccactcaccatcggagaggaaacac
gagcgccagcccaggccccctcggccgcccctcggggaccggccatccacaccaggcacc
aaacccaacatctgtgacggcaacttcaacacagtggccctcttccggggcgagatgttt
gtctttaaggatcgctggttctggcgtctgcgcaataaccgagtgcaggagggctacccc
atgcagatcgagcagttctggaagggcctgcctgcccgcatcgacgcagcctatgaaagg
gccgatgggagatttgtcttcttcaaaggtgacaagtattgggtgtttaaggaggtgacg
gtggagcctgggtacccccacagcctgggggagctgggcagctgtttgccccgtgaaggc
attgacacagctctgcgctgggaacctgtgggcaagacctactttttcaaaggcgagcgg
tactggcgctacagcgaggagcggcgggccacggaccctggctaccctaagcccatcacc
gtgtggaagggcatcccacaggctccccaaggagccttcatcagcaaggaaggatgtact
gcctgtgccctccttttcacactgccccagagcaggtgccggaagtgtctgggagtggtg
atgctgggctgtatttctgcagattacacctatttctacaagggccgggactactggaag
tttgacaaccagaaactgagcgtggagccaggctacccgcgcaacatcctgcgtgactgg
atgggctgcaaccagaaggaggtggagcggcggaaggagcggcggctgccccaggacgac
gtggacatcatggtgaccatcaacgatgtgccgggctccgtgaacgccgtggccgtggtc
atcccctgcatcctgtccctctgcatcctggtgctggtctacaccatcttccagttcaag
aacaagacaggccctcagcctgtcacctactataagcggccagtccaggaatgggtgtga