GENSCAN 1.0	Date run:  8-Nov-116	Time: 13:05:06

Sequence gi568815595r:155728213_155953997 : 225785 bp : 40.63% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3034   3210  177  0  0   30   36   176 0.001   5.79
 1.02 Intr +  16457  16705  249  1  0    9   16   237 0.098   5.31
 1.03 Intr +  16754  17142  389  1  2   38   53   213 0.091   5.46
 1.04 Term +  26623  26827  205  1  1   42   47   167 0.225   3.86
 1.05 PlyA +  28003  28008    6                               1.05

 2.13 PlyA -  28658  28653    6                               1.05
 2.12 Term -  35706  35305  402  0  0   39   47   245 0.991   9.67
 2.11 Intr -  39457  39297  161  2  2   69  121    47 0.832   4.89
 2.10 Intr -  47636  47489  148  2  1   42  100    94 0.200   4.89
 2.09 Intr -  74379  74320   60  0  0   86  119    36 0.697   4.51
 2.08 Intr -  78154  77927  228  1  0   51   51   305 0.624  20.24
 2.07 Intr - 101691 101476  216  0  0   72  107   179 0.966  15.98
 2.06 Intr - 105373 105256  118  0  1   73  115    23 0.995   3.05
 2.05 Intr - 105829 105645  185  1  2   78   98   160 0.994  13.66
 2.04 Intr - 114341 114220  122  0  2   18  116    64 0.410   1.49
 2.03 Intr - 125010 124896  115  0  1   99  115     4 0.747   3.30
 2.02 Intr - 125809 125132  678  1  0   72   60   416 0.333  28.08
 2.01 Init - 126473 126144  330  2  0   50   -9   239 0.362   7.76
 2.00 Prom - 126786 126747   40                              -4.15

 3.03 PlyA - 128514 128509    6                               1.05
 3.02 Term - 142969 141981  989  2  2   67   49   390 0.390  24.24
 3.01 Init - 161481 161172  310  0  1   72  116   178 0.855  16.52
 3.00 Prom - 162914 162875   40                              -4.05

 4.00 Prom + 163919 163958   40                             -12.43
 4.01 Init + 165036 165041    6  2  0   53   66     0 0.598  -4.73
 4.02 Intr + 165306 165487  182  2  2   60   31   225 0.785  11.74
 4.03 Intr + 169715 169829  115  2  1   62   91   100 0.704   7.23
 4.04 Intr + 179557 179713  157  0  1   41   63   101 0.435   1.56
 4.05 Intr + 182480 182673  194  0  2   54   99   172 0.973  13.19
 4.06 Intr + 182902 183060  159  0  0  107   48   209 0.482  18.06
 4.07 Intr + 184757 184841   85  1  1   64   94    72 0.610   3.87
 4.08 Intr + 186207 186358  152  1  2   87   77    97 0.997   7.46
 4.09 Intr + 187807 187980  174  0  0   45   83   192 0.999  13.61
 4.10 Intr + 191021 191126  106  1  1   77   98    50 0.990   3.77
 4.11 Intr + 193975 194090  116  2  2   83   85    49 0.886   3.35
 4.12 Intr + 197047 197154  108  0  0   50  109    67 0.392   4.56
 4.13 Intr + 201432 201731  300  2  0   25   86   151 0.443   4.61
 4.14 Intr + 203553 203668  116  2  2  106   89    59 0.966   6.13
 4.15 Intr + 206704 206834  131  1  2   99  119   107 0.990  14.32
 4.16 Intr + 208126 208298  173  2  2   42   76   225 0.999  15.44
 4.17 Term + 209379 209480  102  2  0  107   38    81 0.796   2.30
 4.18 PlyA + 213836 213841    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +   3034   3249  216  0  0   30   49   218 0.856   8.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:155728213_155953997|GENSCAN_predicted_peptide_1|339_aa
VPDSSQQLASTCRLRLKAYSSDRSASVDPDSSPIPTNNKLQVYPHAPRQQANPHGPNQQG
IPTHSTHSPKQACAGCGCRERNLGHLLTRSSDWRTSSLFPAHPLLSWAPSSPESTDLLSF
ECSVAEGLLGVRGTRSHLRSAGGQKSPPRRALLPTSQQKPQTSGEEQGAAATTCFLIQIL
TLTQEPPSLSAPQLPRKSGTGVAESGLERLLPPLARAGWVYGTLGLHVEPQGCTWNPWLT
LSCGAPRLARARSTGNEVLLLPRKFQKFRNPGHPWASQPVSTGRGVQISKGGSAPMAIFE
EAMEDKDDLTENRTEAPRWYDQETHTTRTRSYHYSSPAG

>gi568815595r:155728213_155953997|GENSCAN_predicted_CDS_1|1020_bp
gtaccagactcatcacagcagctggccagcacctgcagactcaggctcaaggcctattcc
agtgacaggtctgcctctgtggatccagactcaagtccaattcccacaaacaacaaactc
caagtctaccctcatgcacctaggcagcaggctaaccctcatggacccaatcaacagggg
atccccacgcacagcactcacagtcctaaacaggcgtgtgccggctgtggctgccgagaa
aggaacttgggccacctgctcactcgctcatcggactggcgtaccagttctctttttcct
gcacacccccttctctcctgggccccttcttcccccgaaagcactgacctcctcagcttt
gagtgttcagtagctgaaggactcctcggagtccgtggcacaaggagccacctccgaagt
gctgggggccagaaaagcccccctagaagagcacttctccccactagccagcagaagccc
cagacgagcggggaagagcagggcgccgccgccacaacctgctttctcattcaaatcctc
acgctcacacaggagcccccctccctctcggccccgcagcttccgaggaaatcaggaact
ggagttgcggagagcggactggagcgcctgctgcctcctctggcccgggcgggatgggtg
tacggaaccctagggctgcacgtggaaccccaaggctgcacctggaacccttggcttaca
ctctcctgcggggctccccgcttggcaagggccagaagcactgggaatgaagtactttta
ctcccccgcaagtttcaaaagtttcgaaacccaggccatccctgggcttctcaacccgta
tcaacaggaagaggtgtccagatctcaaaaggtggatctgctccaatggctatttttgaa
gaggccatggaggataaggatgatcttacagagaacagaactgaggcacccagatggtat
gaccaagaaacgcacacaactaggaccaggagctatcattattcctctccagcaggataa

>gi568815595r:155728213_155953997|GENSCAN_predicted_peptide_2|920_aa
MTEAHAFQTATVAVTGPEFGRRPAPAARCAGVNPPRRFRQPRLQVPTKHCFRTGPRERVP
DWLALEAGKGPVRDWDHFLKREAGSYMLFLESCRESALCRIDSSESWRCWTGLCIVSDMS
PTISHKDSSRQRRPGNFSHSLDMKSGPLPPGGWDDSHLDSAGREGDREALLGDTGTGDFL
KAPQSFRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLK
LLWAPLVDAVYVKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDDRTPDVIALTVA
FFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVVYLSYYGVRFIYPFERVCDVGGK
LINLLEIIVWEITQENEVSVVKEETQGITDTYKLLFAIIKMPAVLTFCLLILTAKIGFSA
ADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISKYTAGPQPLNTFYKAMPYRLLL
GLEYALLVWWTPKVEHQGGFPIYYYIVVLLSYALHQVTVYSMYVSIMAFNAKVSDPLIGG
TYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVEVAGPPRSAGKGT
PPPSRGERRPLPPAGGAQGRSQEAGNMAGQPAATGSPSADKDGMEPNVVARISQWADDHL
RLVRNISTGMAIAGIMLLLRSIRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENGLEIE
HIPITLPIIASLRKEPRGALLVKLAGVELAETGKAWLQKELKPSQLLWFQLLGKENSALF
CYLLVSKGGYFSVNLNEEILRRGLGKTVLVKGLKYDSKIYWTVHRNLLKAELTALKKGEG
IWKEDSEKESYLEKFKDSWREIWKKDSFLKTTGSDFSLKKESYYEKLKRTYEIWKDNMNN
CSLILKFRELISRINFRRKG

>gi568815595r:155728213_155953997|GENSCAN_predicted_CDS_2|2763_bp
atgaccgaggcccacgctttccagaccgccacagtcgctgtcacagggcctgagtttggg
cggcgccccgccccggccgcacggtgcgccggcgttaatcctccccgaaggttccggcag
ccaagattgcaggttcccaccaagcattgtttccgaactgggccacgagagcgtgtccct
gattggcttgctctggaggctgggaagggacctgttagagactgggaccacttcctgaag
cgcgaggcaggaagttatatgctttttctggagtcctgtagagaaagtgctctctgccgc
attgatagcagcgagagctggaggtgttggacggggctctgcatcgtctctgatatgtca
cccaccatctcccacaaggacagcagccggcaacggcggccagggaatttcagtcactct
ctggatatgaagagcggtcccctgccgccaggcggttgggatgacagtcatttggactca
gcgggccgggaaggggacagagaagctcttctgggggataccggcactggcgacttctta
aaagccccacagagcttccgggccgaactaagcagcattttgctactactctttctttac
gtgcttcagggtattcccctgggcttggcgggaagcatcccactcattttgcaaagcaaa
aatgttagctatacagaccaagctttcttcagttttgtcttttggcccttcagtctcaaa
ttactctgggccccgttggttgatgcggtctacgttaagaacttcggtcgtcgcaaatct
tggcttgtcccgacacagtatatactaggactcttcatgatctatttatccactcaggtg
gaccgtttgcttgggaataccgatgacagaacacccgacgtgattgctctcactgtggcg
ttctttttgtttgaattcttggccgccactcaggacattgccgtcgatggttgggcgtta
actatgttatccagggaaaatgtgggttatgcttctacttgcaattcggtagtgtattta
agctattatggtgttaggtttatttatccttttgaaagagtgtgtgacgttggagggaag
ctcattaatttactggaaatcattgtatgggagataactcaagaaaacgaagtatcagta
gtaaaagaagaaacacaagggatcacagatacttacaagctgctttttgcaattataaaa
atgccagcagttctgacattttgccttctgattctaactgcaaagattggtttttcagca
gcagatgctgtaacaggactgaaattggtagaagagggagtacccaaagaacatttagcc
ttattggcagttccaatggttcctttgcagataatactgcctctgattatcagcaaatac
actgcaggtccccagccattaaacacattttacaaagccatgccctacagattattgctt
gggttagaatatgccctactggtttggtggactcctaaagtagaacatcaagggggattc
cctatatattactatatcgtagtcctgctgagttatgctttacatcaggttacagtgtac
agcatgtatgtttctataatggctttcaatgcaaaggttagtgatccacttattggagga
acatacatgacccttttaaataccgtgtccaatctgggaggaaactggccttctacagta
gctctttggcttgtagatcccctcacagtaaaagagtgtgtaggagcatcaaaccagaat
tgtcgaacacctgatgctgttgaggtcgcggggccaccccggtccgcggggaaggggacc
ccgccgccttcccgaggtgagcggcgccccctgccgccagccggaggagctcagggccgc
tcgcaggaggccgggaacatggcggggcagcccgcggccaccggctcgccgtctgccgac
aaggacggaatggagcccaacgtcgtggctcggatctcgcagtgggcagacgaccacctg
cgcctagtccggaacatcagcactggaatggccatagctggaataatgttacttttgaga
agcattcgactgacatcaaaatttacaagctcttcggatattccagtagaatttataaga
agaaatgttaaactacgtggacgattacgccgaataactgagaatggtttagaaattgaa
catatacctattactttacctattatagcttcattgagaaaagagccacgtggtgctttg
ctggttaagttggctggagtagaactcgctgaaactgggaaggcatggttacaaaaagag
ctaaaaccttcccaattactatggttccaacttcttggaaaggagaattcagcactcttt
tgctatcttctggtgagtaagggtggatatttcagcgtgaatctgaatgaagaaattttg
agaagaggccttggcaaaactgttcttgttaaagggcttaaatatgattctaaaatctac
tggacagttcacagaaacttacttaaagctgaattaacagccttaaaaaaaggagaagga
atatggaaggaagactctgaaaaagaaagttacttagaaaaattcaaagattcctggaga
gaaatatggaaaaaggacagttttttaaaaacaacaggatcagatttcagcttgaaaaaa
gaaagttattatgaaaaacttaaaaggacttatgaaatatggaaagacaacatgaacaac
tgctccttaatactgaagttcagagaacttataagtcgcataaactttcgtagaaaaggg
tga

>gi568815595r:155728213_155953997|GENSCAN_predicted_peptide_3|432_aa
MEMFMEMFCDFLGSHIITEQLDSKDIYKNPKIQVGGDKLPQPQTLVLQHLRGKQSSLIKG
PENRRIPNTQEVRPRRHSTQLENRSALGGGLPTPIVHKWQGTQAARGRRGPATRPRGADA
LPDARTSTRRQDQQSIAAPEIKHATGPDQGLYDAWLPGAQGCADGLGEGGGEGPRGVAPR
SGSLASAGMRCCRDPHADLGVSVAQSHRGQGRSRGGDGDSTRRGGRVPEGSAPRAEVEKE
AWSRSSRQRRGASRQKSAEWSNSSGARAPAPRERRPAARTLPPPPASAPAGHWEEPEPVR
LGSRASDTLRSRRQTGRPSRGGARGARPRPQPGPRRQSRPGLPRPALGRRSPRHPPAPPL
LPSHRGARPGGGACGAGQEKNRSRIRASLLLPDLPATLDDFGRLAAPKRPPESWAPGGTL
SRWRGLISGCWT

>gi568815595r:155728213_155953997|GENSCAN_predicted_CDS_3|1299_bp
atggaaatgtttatggaaatgttttgtgattttcttggatcccacataattactgaacaa
ctagatagcaaagacatttacaagaaccccaaaatacaagttggtggtgacaaactacca
cagccacaaaccctagtgctacagcacctacgtgggaagcaatccagccttattaaagga
cctgaaaacaggagaattcccaacacccaagaggtacgacccagaaggcacagcacccaa
ttagagaaccgcagcgcgctaggaggaggtttgcccacaccaatagtacacaagtggcag
ggaacccaagcggcgcgggggaggcgggggccagcgacgcggccgcggggagctgatgcc
ctccccgacgcccggacctcgacacgcagacaagatcaacaaagcatcgccgctcccgag
ataaaacatgccacaggccccgaccagggactctacgacgcgtggctgcccggggcgcag
ggctgcgcggacgggctgggggaagggggtggggaagggcctcgcggggtggctccccgg
tccgggagcctcgcctccgccgggatgcggtgctgcagggacccccacgctgaccttgga
gtctccgttgcacagagccatcggggccagggccggagccgcggcggtgacggcgacagt
acgagacggggcgggagggtgccggaagggtcggcgccgcgggctgaggttgagaaggag
gcctggtcgaggagcagccggcagcggagaggagccagccgccagaaaagcgccgaatgg
agcaacagcagcggagcgcgggccccagcgccgcgggagagaagaccagcagcgcgcacg
ctgcccccgcctcctgcttccgccccggccggccactgggaggagccagagcccgttcgg
cttggcagccgagcctcagataccctccgcagccgccgccaaaccggccggccctcgaga
ggaggggctcgcggcgcccggccccgcccccagcccggtccccgccggcaaagccggccg
ggtctcccgcggcccgcccttgggaggaggagcccgcggcatccaccggctccgcccctc
ctgccctcgcaccgaggagcccgccccggaggaggggcctgtggcgccggccaggagaaa
aaccgaagccgaatccgagctagtttgctgctgccggatttgcctgctaccttggatgac
ttcgggaggctggcggcaccgaagaggcctcctgagagctgggcccctggcggaactctt
agccggtggcgtggccttatctcaggttgctggacatga

>gi568815595r:155728213_155953997|GENSCAN_predicted_peptide_4|791_aa
MHLENAGGDLKDGHHHYEGAVVILDAGAQYGKVIDRRVRELFVQSEIFPLETPAFAIKEQ
GFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYGMQAIQGRHSYKMTLDMKKISA
NLFGYLGKEETAVQRSWVGTIFEEQQESMWLEQSIANESKKLYGAQFHPEVGLTENGKVI
LKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSKVLVLLSGGVDSTVCTALLNRALNQ
EQVIAVHIDNGFMRKRESQSVEEALKKLGIQNTVDVFSRGAKREVLGLSLLIPGIVEGGV
INAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMN
LKPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHK
DEVRILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSASV
KKRVKACTTEEDQEKLMQITSLHSLNAFLLPIKTVGVQLISNFSKVSGYKINVQKSQAFL
YTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNI
PCSWVGRINIVKMAILPKGDCRSYSYVCGISSKDEPDWESLIFLARLIPRMCHNVNRVVY
IFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILRESGYAGKISQMPVILTPLHFDR
DPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVEVVLKMVTEIKKIPGISRIMYDL
TSKPPGTTEWE

>gi568815595r:155728213_155953997|GENSCAN_predicted_CDS_4|2376_bp
atgcatctggagaatgctggaggagaccttaaggatggccaccaccactatgaaggagct
gttgtcattctggatgctggtgctcagtacgggaaagtcatagaccgaagagtgagggaa
ctgttcgtgcagtctgaaattttccccttggaaacaccagcatttgctataaaggaacaa
ggattccgtgctattatcatctctggaggacctaattctgtgtatgctgaagatgctccc
tggtttgatccagcaatattcactattggcaagcctgttcttggaatttgctatggtatg
caggctattcagggaaggcattcctataagatgacattggacatgaagaaaataagtgct
aacctttttggatatttggggaaagaggaaacagcagtacagagatcctgggtggggacc
atatttgaggagcagcaggaatccatgtggttggagcagagcatagcaaatgaatctaaa
aagttatatggagcacagttccaccctgaagttggccttacagaaaatggaaaagtaata
ctgaagaatttcctttatgatatagctggatgcagtggaaccttcaccgtgcagaacaga
gaacttgagtgtattcgagagatcaaagagagagtaggcacgtcaaaagttttggtttta
ctcagtggtggagtagactcaacagtttgtacagctttgctaaatcgtgctttgaaccaa
gaacaagtcattgctgtgcacattgataatggctttatgagaaaacgagaaagccagtct
gttgaagaggccctcaaaaagcttggaattcagaacactgtggatgtattctctagaggg
gctaaacgagaggttctgggcttgagcctactaataccaggcatagttgagggtggagtg
ataaatgctgctcattctttctacaatggaacaacaaccctaccaatatcagatgaagat
agaaccccacggaaaagaattagcaaaacgttaaatatgaccacaagtcctgaagagaaa
agaaaaatcattggggatacttttgttaagattgccaatgaagtaattggagaaatgaac
ttgaaaccagaggaggttttccttgcccaaggtactttacggcctgatctaattgaaagt
gcatcccttgttgcaagtggcaaagctgaactcatcaaaacccatcacaatgacacagag
ctcatcagaaagttgagagaggagggaaaagtaatagaacctctgaaagattttcataaa
gatgaagtgagaattttgggcagagaacttggacttccagaagagttagtttccaggcat
ccatttccaggtcctggcctggcaatcagagtaatatgtgctgaagaaccttatatttgt
aaggactttcctgaaaccaacaatattttgaaaatagtagctgatttttctgcaagtgtt
aaaaagagagtcaaagcctgcacaacagaagaggatcaggagaagctgatgcaaattacc
agtctgcattcactgaatgccttcttgctgccaattaaaactgtaggtgtgcagctgata
agcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattctta
tacaccaacaacagacaaacagagagccaaatcatgagtgaactcccattcacaattgct
tcaaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaag
gagaactacaaaccactgctcaaggaaataaaagaggatacaaacaaatggaagaacatt
ccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaagggtgac
tgtcgttcctacagttacgtgtgtggaatctccagtaaagatgaacctgactgggaatca
cttatttttctggctaggcttatacctcgcatgtgtcacaacgttaacagagttgtttat
atatttggcccaccagttaaagaacctcctacagatgttactcccactttcttgacaaca
ggggtgctcagtactttacgccaagctgattttgaggcccataacattctcagggagtct
gggtatgctgggaaaatcagccagatgccggtgattttgacaccattacattttgatcgg
gacccacttcaaaagcagccttcatgccagagatctgtggttattcgaacctttattact
agtgacttcatgactggtatacctgcaacacctggcaatgagatccctgtagaggtggta
ttaaagatggtcactgagattaagaagattcctggtatttctcgaattatgtatgactta
acatcaaagcccccaggaactactgagtgggagtaa