GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:28:06

Sequence gi568815596f:168728420_168964967 : 236548 bp : 39.56% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   1143   1312  170  1  2   43   39   155 0.383   3.16
 1.02 PlyA +   1568   1573    6                               1.05

 2.00 Prom +   6026   6065   40                              -3.75
 2.01 Init +  10923  10994   72  2  0   94   81    38 0.110   4.82
 2.02 Intr +  22623  22717   95  2  2   74   71    89 0.009   3.64
 2.03 Intr +  37173  37329  157  0  1  107  121    -6 0.264   3.69
 2.04 Term +  41091  41243  153  2  0   99   32   246 0.595  17.04
 2.05 PlyA +  42323  42328    6                               1.05

 3.00 Prom +  51102  51141   40                              -5.65
 3.01 Init +  54133  54221   89  0  2  103   92    29 0.568   4.96
 3.02 Intr +  54626  54713   88  2  1   96   14    53 0.253  -2.25
 3.03 Term +  59933  60121  189  1  0   49   49   242 0.752  12.87
 3.04 PlyA +  61814  61819    6                               1.05

 4.03 PlyA -  62583  62578    6                               1.05
 4.02 Term -  74281  74011  271  0  1   84   50   149 0.363   4.67
 4.01 Init -  79626  79472  155  0  2   64   30   149 0.631   6.20
 4.00 Prom -  83080  83041   40                              -5.35

 5.00 Prom +  83401  83440   40                              -4.95
 5.01 Init +  92034  92044   11  2  2   56  116     0 0.184  -0.48
 5.02 Intr +  96215  96298   84  2  0   68  115    48 0.490   3.52
 5.03 Intr +  99739  99801   63  1  0   88   70    50 0.332   0.11
 5.04 Intr + 100001 100082   82  2  1   90   70    59 0.732   3.02
 5.05 Intr + 105808 105906   99  0  0   93  121    97 0.746  12.89
 5.06 Intr + 114573 114698  126  2  0   23  111    62 0.460   1.96
 5.07 Intr + 115790 115924  135  1  0   34   52    98 0.494   0.64
 5.08 Intr + 122665 122763   99  0  0   97   79     9 0.410   0.29
 5.09 Intr + 122860 122985  126  0  0   83   59   135 0.878  10.06
 5.10 Intr + 126933 127041  109  2  1   83   93    86 0.931   7.54
 5.11 Intr + 128271 128359   89  1  2   68   84    66 0.947   2.97
 5.12 Intr + 128908 128968   61  0  1   64   70    90 0.760   2.19
 5.13 Intr + 133541 133630   90  0  0   45   90    60 0.446   0.95
 5.14 Term + 136415 136551  137  0  2   86   41   117 0.719   4.00
 5.15 PlyA + 136616 136621    6                               1.05

 6.00 Prom + 138734 138773   40                              -3.65
 6.01 Init + 140192 140371  180  1  0   70   41   161 0.670   8.83
 6.02 Term + 140660 141283  624  1  0  -23   42   297 0.460   7.40
 6.03 PlyA + 141703 141708    6                               1.05

 7.09 PlyA - 142499 142494    6                               1.05
 7.08 Term - 143136 143012  125  1  2  117   38   121 0.994   7.57
 7.07 Intr - 145264 145166   99  2  0   99   95    19 0.879   2.86
 7.06 Intr - 147757 147653  105  2  0   62  115   100 0.994   9.37
 7.05 Intr - 148965 148819  147  1  0   65  106   132 0.956  11.99
 7.04 Intr - 161114 160968  147  0  0   64   82   128 0.969   9.09
 7.03 Intr - 161563 161316  248  0  2   22   88    52 0.720  -5.22
 7.02 Intr - 162267 161899  369  2  0   47  116   189 0.294  10.90
 7.01 Init - 163817 163675  143  2  2   80   92    29 0.553   2.15
 7.00 Prom - 169897 169858   40                              -4.35

 8.00 Prom + 172839 172878   40                              -2.85
 8.01 Init + 179151 179369  219  2  0   65   43   176 0.232   9.58
 8.02 Term + 184593 184910  318  2  0   20   38   278 0.693   9.90
 8.03 PlyA + 185039 185044    6                               1.05

 9.11 PlyA - 185765 185760    6                               1.05
 9.10 Term - 195403 195203  201  1  0  113   46   287 0.994  23.41
 9.09 Intr - 196384 196238  147  1  0   73  115   171 0.974  17.81
 9.08 Intr - 198943 198737  207  1  0  116  105   179 0.991  20.75
 9.07 Intr - 202443 202246  198  0  0   96   91   201 0.987  19.83
 9.06 Intr - 204114 203958  157  2  1  108  106   133 0.997  16.19
 9.05 Intr - 207006 206765  242  0  2   78   94   237 0.669  18.73
 9.04 Intr - 208014 207811  204  0  0   98   89    98 0.672   9.37
 9.03 Intr - 216347 216186  162  2  0  109   72   140 0.998  13.75
 9.02 Intr - 229709 229545  165  2  0   70   98   155 0.975  13.94
 9.01 Intr - 235889 235787  103  1  1  117   77   176 0.999  18.66

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +   6076   6192  117  0  0   46   38   132 0.844   1.56
S.002 Term -  13624  13510  115  0  1  106   44   126 0.832   7.06
S.003 Term - 160872 160799   74  1  2   71   48    81 0.874  -0.51


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:168728420_168964967|GENSCAN_predicted_peptide_1|56_aa
XPEPSQKPSLQNPRVQGSVVLSEQATLAVSFSWQNLFHASDGSVAKETEPQDHWHP

>gi568815596f:168728420_168964967|GENSCAN_predicted_CDS_1|171_bp
ntaccagaaccatcccagaaaccttccctgcagaatcccagagtgcagggctctgtggtg
ctatcagagcaggccacgctggctgtgtcctttagttggcagaacctcttccatgcctct
gatggcagtgttgccaaggagacggaaccacaggatcattggcatccctag

>gi568815596f:168728420_168964967|GENSCAN_predicted_peptide_2|158_aa
MSKSGEGRTGYNAEQNLTPGIESKMQNIAVVTELNIDDSSDFDQKPCYLKTYPKHKVLNT
TLFESWEIVGPYPSWWVFNLLLLLVQGLNCFWSYLIVKIACKAVSRGKVSKDDRSDIESS
SDEEDSEPPGKNPHTATTTNGTSGTNGYLLTGSCSMDD

>gi568815596f:168728420_168964967|GENSCAN_predicted_CDS_2|477_bp
atgagcaaaagcggagagggaagaacaggatacaatgcagaacaaaatcttactccggga
atagagtctaagatgcaaaacatagctgtggtcactgagctaaatattgatgatagcagt
gactttgatcaaaagccatgttacctcaaaacttatcctaaacacaaggtgttaaatacc
acattatttgaaagctgggagatcgttggaccttacccttcctggtgggtttttaaccta
ctgctattgctagtacaagggttgaactgcttctggtcttacttgattgtgaaaatagct
tgcaaagctgtttcaagaggcaaggtgtccaaggatgatcgaagtgatattgagtctagc
tcagatgaggaggactcagaacctccgggaaagaatccccacactgcgacaaccaccaat
gggaccagtggtaccaacgggtatctcctgactggctcctgctccatggatgattaa

>gi568815596f:168728420_168964967|GENSCAN_predicted_peptide_3|121_aa
MVSRKGSLPTDRKKPETGYQQLPNKISGVGQILSSEKARIEGAAGLYRFADSNRTNKIRD
RAEQISLLGEGITVARSGMMGAKLGMEMSAQEDSAAGRIVAQGGGEEESTQGGSEELEEE
A

>gi568815596f:168728420_168964967|GENSCAN_predicted_CDS_3|366_bp
atggtgtcaaggaaaggcagtctcccaacagatagaaaaaaacctgaaactggttatcag
cagcttcccaataagatctcaggagttggtcaaattctttcttctgagaaggcaagaatt
gagggtgctgcaggcctgtacagatttgccgacagtaacagaaccaataaaatacgtgac
agagcagagcagatatctctgctaggtgagggaatcactgtggcccggagtggaatgatg
ggagccaaattgggcatggagatgtctgcccaggaggacagtgcagctggcagaatcgta
gcccaaggtgggggtgaagaggaatccacacaaggtgggagtgaggagttggaggaggaa
gcatga

>gi568815596f:168728420_168964967|GENSCAN_predicted_peptide_4|141_aa
MLKVYKPVIENSIAFSGSGEACGKGIHIQPLKVRGCWTKAQSMASIDPWATRHTNHTELL
TGQSVSGSLMLKCVWLLSFHLRSSILDTVIKVGCVLDFRDSKGLEYVSPCQTFQGGSPSP
GLSSRLCPEKVKNCSGSRRPV

>gi568815596f:168728420_168964967|GENSCAN_predicted_CDS_4|426_bp
atgctgaaagtttataagccagtgattgaaaactcaattgccttcagtggcagtggtgaa
gcctgtggcaaaggcattcacattcaacctcttaaagtaaggggctgctggaccaaagca
cagtctatggcttccattgacccatgggctaccaggcacacaaaccacactgagctactc
accggacaatctgtcagtgggtccctcatgttgaaatgtgtctggcttttgtcctttcac
ctacgctccagcattctggacactgtaatcaaggttgggtgtgtcctggacttccgggat
tcaaagggcctagagtacgtcagtccttgtcaaacattccaaggaggaagtcccagccct
ggactttcatcccgtttgtgtcccgagaaagtaaagaactgctctgggtcaagacggcca
gtgtga

>gi568815596f:168728420_168964967|GENSCAN_predicted_peptide_5|436_aa
MSQRANLEISYAKGLQKLASKLSKALQNTRKSCVSSAWAWASEGMKSTADLHQKLGKAIE
LEAIKPTYQVLNVQEKKRKSAKKKLMVSTKKHEALFQLVESSKQSMTEKEKRKLLNKLTK
STEKLEKEDENYYQKNMAGYSTRLKWENTLENCYQKWSPWWEYNRTARNSHAAYARPLVK
QYNPRLYINMTKLNNYQFWRSILELEKERIQLLCNNLNQYSQHISLFGQTLTTCHTQIHC
AISKIDIEKDIQAVMEETAILSTENKSEFLLTDYFEEDPNSAMDKERRKSLLKPKLLRLQ
RDIEKASKDKEGLERMLKTYSSTSSFSDAKSQKDTAALMDEGYRRITGERKDVVAEGIGQ
SAPGAAQLSSRLCKALYSFQARQDDELNLEKGDIVIIHEKKEGGWWFGSLNGKKGHFPAA
YVEELPSNAGNTATKA

>gi568815596f:168728420_168964967|GENSCAN_predicted_CDS_5|1311_bp
atgtcacaaagggcaaacctggaaattagctatgccaaaggacttcagaaactggcaagc
aagctgagcaaagcattacagaacacgagaaaaagttgtgttagcagtgcctgggcctgg
gcctcagagggaatgaaatccacagcggacctgcatcaaaaacttggcaaagcaattgaa
ttggaagcaataaaaccgacttatcaagtcctaaatgtacaagagaagaagagaaaatca
gccaagaagaaattaatggttagtaccaagaaacatgaagcacttttccagcttgtagaa
agctccaagcaatctatgactgagaaggagaagcggaagctcctcaataaactgacaaaa
tcaactgaaaagttggaaaaggaagatgaaaattactaccaaaaaaacatggcgggttat
tctaccagactgaaatgggaaaacacactagagaactgctaccagaaatggagcccatgg
tgggaatacaacagaactgccagaaacagccacgcagcttatgcacggcccctggtgaag
cagtacaaccccaggctctacataaatatgaccaaattaaataactatcaattctggaga
agcattctggagctggagaaggaaagaattcaacttttatgcaataacttaaaccagtac
agccaacatatttctctttttggccaaaccctgaccacatgccacacgcagattcactgt
gccatcagcaagattgacattgaaaaagatatccaggctgtaatggaagaaactgcaatt
ttatctacagaaaacaaatctgagttcctgttaacggattactttgaagaagatcctaac
agtgcaatggataaagagagacgaaagtctttactaaaaccaaaattattgagactgcag
agagacattgaaaaagcctcaaaagacaaggaaggcctggaacgaatgcttaaaacgtac
tccagcacctcctccttctctgatgcaaagagccagaaagacacagcagcgttaatggat
gagggttatcggagaataacaggggaaaggaaagacgtggttgcagagggaatagggcag
tctgcccctggtgcagcccagctcagcagcagactttgcaaggccttgtattcttttcaa
gccaggcaagatgatgagttgaatttggaaaagggtgacattgtgattatacacgagaaa
aaagaaggaggatggtggtttggatctttgaatgggaaaaaaggccattttcctgccgct
tatgtggaggagttaccttcaaatgctggcaacacagctacaaaggcataa

>gi568815596f:168728420_168964967|GENSCAN_predicted_peptide_6|267_aa
MDKFLDTYTLPRLNKEEVESLNRPITGSEIEAIINSLPTKKSPGPDGFTAEFYQRYKEEL
HINRTKDKNHIIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIIWN
GQKLEAFPLKTGTRQGCPLLPLLFNIVLEVLARAIRQKKEIKGIQLGKEELKLSLFADDM
IVYLENPIVSAQNLLKLISNFSKLSGCKINVQKSQAFLYTNNRQTESQIMSELPFTIASK
RIKYLGIQLTRDVKDLFKENYNHCSVK

>gi568815596f:168728420_168964967|GENSCAN_predicted_CDS_6|804_bp
atggataaattcctcgacacatacactctcccaagactaaacaaggaagaagttgaatct
ctgaataggccaataacaggctctgaaattgaggcaataattaatagcttaccaaccaaa
aaaagtccaggaccagatggattcacagctgaattctaccagaggtacaaggaggagctg
catataaacagaaccaaagacaaaaaccacataattatctcaatagatgcggaaaaggcc
tttgacaaaattcaacaacccttcatgctaaaaactctcaataaattaggtattgatggg
atgtatctcaaaataataagagctatctatgacaaacccacagccaatatcatatggaat
ggacaaaaactggaagcattccctttgaaaaccggcacaagacagggatgccctctccta
ccactcctattcaacatagtgttggaagttctggccagggcaatcaggcagaagaaggaa
ataaagggcattcaattaggaaaagaggaactcaaattgtccctgtttgcagatgacatg
attgtatatctagaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaac
ttcagcaaactctcaggatgcaaaatcaatgtgcaaaaatcacaagcatttttatacacc
aataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaag
agaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaac
tacaaccactgctcagtgaaataa

>gi568815596f:168728420_168964967|GENSCAN_predicted_peptide_7|460_aa
MWHLSIPHPAETQPWVTDRISQRRQCSAQYLAQNRNSINPGWFEMKGINLYLKPINDLSW
ASPSGAINTFGSQRRLWLLFRKELRIPECPVPPFSPRESKGEFNQSCQGEPALSANQKAS
LRLEAGGGKCTRFEIGKLAGLRELSLESGCWLEWARIWCGEGGGTQACLRSPYFTVNFYC
SEVEERDRIDVWGLILWEGAGHLAILMISVQKGLELDQGFQKSTVLLVRKWTQGHSACEC
PVQLHLPTNKLLGALSYIMVEDELALFDKSINEFWNKFKSTDTSCQMAGLRDTYKDSIKA
FAEISRQNKLIQEKKDNLLKLIAEVKGKKQELEVLTANIQDLKEEYSRKKETISTANKAN
AERLKRLQKSADLYKDRLGLEIRKIYGEKLQFIFTNIDPKNPESPFMFSLHLNEARDYEV
SDSAPHLEGLAEFQENVRKTNNFSAFLANVRKAFTATVYN

>gi568815596f:168728420_168964967|GENSCAN_predicted_CDS_7|1383_bp
atgtggcatctttctattccccaccctgcagaaacccaaccctgggtcacagaccgtata
tcccagagaaggcagtgctcagctcagtacctggcacaaaatagaaactcaataaaccct
ggttggtttgaaatgaaaggtataaacctttatttgaagccgataaatgacttgtcgtgg
gcgagcccttcgggtgctattaatactttcgggtcacagcggagactctggctgttgttc
agaaaagaactacgaatcccagaatgccctgttcccccattttcccctcgagaatccaag
ggtgagttcaaccaatcctgtcaaggagagcctgcgctatcggccaatcagaaggccagc
ctgcgcctggaggcgggtggcgggaagtgcactaggtttgaaatcggaaagttggcgggg
ctgcgggagctgagcctagagtccggctgttggctagagtgggcgcggatctggtgtggg
gaaggcggcgggactcaggcctgcctgcgaagtccctattttactgttaacttttactgt
tctgaggtggaggagagagacaggatagatgtgtggggtcttattctatgggagggtgcc
ggccacctggctatcctgatgatctctgttcagaaagggttagagttggatcaggggttt
cagaagtcaacagttttacttgtgagaaaatggacccagggtcatagtgcgtgtgagtgt
cctgtgcagttacacttacctactaacaagctgctaggagcattgtcctacataatggta
gaggacgaactggcacttttcgataaaagcataaatgaattttggaataaattcaaaagt
acggacacctcctgtcagatggcgggactaagagatacctacaaggattccatcaaagca
tttgcagagatcagcaggcaaaataagctcattcaagaaaaaaaggataacttgttaaaa
ttgattgctgaagtaaaaggcaaaaagcaggaattggaagtactgactgcaaatatccag
gatcttaaggaagaatattctaggaagaaggaaactatttctactgctaataaagcgaat
gcagagaggttgaaaaggctgcagaaatctgcagacttgtataaagatcgacttggacta
gaaattcgaaaaatttatggtgagaaattgcagtttattttcactaatattgaccctaag
aatcctgagagcccatttatgttttccttacatctcaatgaagcaagggactatgaagtg
tcagatagtgcccctcatcttgagggcctagcagaatttcaagagaatgtaaggaagacc
aacaatttttcagcttttcttgccaatgttcggaaagcttttactgccacggtttataat
taa

>gi568815596f:168728420_168964967|GENSCAN_predicted_peptide_8|178_aa
MLVAEAFEHTPGIQTASLGTYLKTNLFLFLFAVGFYLLLRVLNIDLLWSVPIAKKWCANP
DWIHIDTTPFAGLRGEERRRWQHSSPFLALAKWKLKRPPWEDLGALQGEQAICVPGKETQ
HYRRQRRASLLSHSPTPVRQLSRSHSNSCSKSWLFPGFRLCLMNSMDRIVICAHTSCC

>gi568815596f:168728420_168964967|GENSCAN_predicted_CDS_8|537_bp
atgctggtggcagaggcctttgaacacactccaggcatccaaacggccagtctgggcaca
tacctgaagaccaacctctttctcttcctgtttgcagttggcttttacctgcttcttagg
gtgctcaacattgacctgctgtggtccgtgcccatagccaaaaagtggtgtgctaacccc
gactggatccacattgacaccacgccttttgctggactccgcggggaggaacgtaggcgc
tggcagcacagcagcccgtttctggcgctggccaagtggaaactgaagcggcctccctgg
gaggatctgggtgcgctgcagggggagcaggccatctgtgtgcctggaaaagaaacccag
cactaccgaagacaaagaagagcttctttactctcgcactcacctacccctgtacgtcaa
ctgagccgatcacactctaattcctgttcaaagagttggctttttccaggattcaggctt
tgtctgatgaacagcatggaccggattgtcatctgtgctcatacatcctgctgctaa

>gi568815596f:168728420_168964967|GENSCAN_predicted_peptide_9|595_aa
XASIRQRSKSQLSYLVHEPPLAVVDHKSTYEEDRKDKDIPVQEEVEPAPVRRILKFSAPE
WPYMLVGSVGAAVNGTVTPLYAFLFSQILGGYAFAKSGELLTKRLRKFGFRAMLGQDIAW
FDDLRNSPGALTTRLATDASQVQGAAGSQIGMIVNSFTNVTVAMIIAFSFSWKLSLVILC
FFPFLALSGATQTRMLTGFASRDKQALEMVGQITNEALSNIRTVAGIGKERRFIEALETE
LEKPFKTAIQKANIYGFCFAFAQCIMFIANSASYRYGGYLISNEGLHFSYVFRVISAVVL
SATALGRAFSYTPSYAKAKISAARFFQLLDRQPPISVYNTAGEKWDNFQGKIDFVDCKFT
YPSRPDSQVLNGLSVSISPGQTLAFVGSSGCGKSTSIQLLERFYDPDQGKVMIDGHDSKK
VNVQFLRSNIGIVSQEPVLFACSIMDNIKYGDNTKEIPMERVIAAAKQAQLHDFVMSLPE
KYETNVGSQGSQLSRGEKQRIAIARAIVRDPKILLLDEATSALDTESEKTVQVALDKARE
GRTCIVIAHRLSTIQNADIIAVMAQGVVIEKGTHEELMAQKGAYYKLVTTGSPIS

>gi568815596f:168728420_168964967|GENSCAN_predicted_CDS_9|1788_bp
nnggcttccatccggcaacgctccaagtctcagctttcttacctggtgcacgaacctcca
ttagctgttgtagatcataagtctacctatgaagaagatagaaaggacaaggacattcct
gtgcaggaagaagttgaacctgccccagttaggaggattctgaaattcagtgctccagaa
tggccctacatgctggtagggtctgtgggtgcagctgtgaacgggacagtcacacccttg
tatgcctttttattcagccagattcttgggggatatgcctttgctaaatctggggagctc
ctaacaaaaaggctacgtaaatttggtttcagggcaatgctggggcaagatattgcctgg
tttgatgacctcagaaatagccctggagcattgacaacaagacttgctacagatgcttcc
caagttcaaggggctgccggctctcagatcgggatgatagtcaattccttcactaacgtc
actgtggccatgatcattgccttctcctttagctggaagctgagcctggtcatcttgtgc
ttcttccccttcttggctttatcaggagccacacagaccaggatgttgacaggatttgcc
tctcgagataagcaggccctggagatggtgggacagattacaaatgaagccctcagtaac
atccgcactgttgctggaattggaaaggagaggcggttcattgaagcacttgagactgag
ctggagaagcccttcaagacagccattcagaaagccaatatttacggattctgctttgcc
tttgcccagtgcatcatgtttattgcgaattctgcttcctacagatatggaggttactta
atctccaatgaggggctccatttcagctatgtgttcagggtgatctctgcagttgtactg
agtgcaacagctcttggaagagccttctcttacaccccaagttatgcaaaagctaaaata
tcagctgcacgcttttttcaactgctggaccgacaacccccaatcagtgtatacaatact
gcaggtgaaaaatgggacaacttccaggggaagattgattttgttgattgtaaatttaca
tatccttctcgacctgactcgcaagttctgaatggtctctcagtgtcgattagtccaggg
cagacactggcgtttgttgggagcagtggatgtggcaaaagcactagcattcagctgttg
gaacgtttctatgatcctgatcaagggaaggtgatgatagatggtcatgacagcaaaaaa
gtaaatgtccagttcctccgctcaaacattggaattgtttcccaggaaccagtgttgttt
gcctgtagcataatggacaatatcaagtatggagacaacaccaaagaaattcccatggaa
agagtcatagcagctgcaaaacaggctcagctgcatgattttgtcatgtcactcccagag
aaatatgaaactaacgttgggtcccaggggtctcaactctctagaggggagaaacaacgc
attgctattgctcgggccattgtacgagatcctaaaatcttgctactagatgaagccact
tctgccttagacacagaaagtgaaaagacggtgcaggttgctctagacaaagccagagag
ggtcggacctgcattgtcattgcccatcgcttgtccaccatccagaacgcggatatcatt
gctgtcatggcacagggggtggtgattgaaaaggggacccatgaagaactgatggcccaa
aaaggagcctactacaaactagtcaccactggatcccccatcagttga