GENSCAN 1.0	Date run:  8-Nov-116	Time: 13:00:51

Sequence gi568815584f:73850333_74061904 : 211572 bp : 43.33% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   1144   1183   40                              -2.76
 1.01 Init +  20035  20083   49  0  1   86   58    45 0.848   0.41
 1.02 Term +  20779  20903  125  2  2   86   47   142 0.913   8.45
 1.03 PlyA +  21121  21126    6                               1.05

 2.00 Prom +  21960  21999   40                              -6.26
 2.01 Init +  26789  26836   48  1  0   59   97    30 0.675   1.16
 2.02 Intr +  28203  28358  156  2  0   68   38    75 0.535   0.71
 2.03 Intr +  29723  29844  122  1  2   85   93   105 0.979   9.99
 2.04 Intr +  30873  30960   88  0  1  122   70     9 0.872   2.47
 2.05 Intr +  43465  43600  136  0  1  111   98     1 0.961   3.54
 2.06 Intr +  47739  47930  192  1  0  124   77    92 0.973  11.16
 2.07 Intr +  53628  53778  151  1  1   53   97    64 0.954   3.02
 2.08 Intr +  54570  54751  182  0  2   83   89   203 0.951  19.41
 2.09 Intr +  59009  59098   90  0  0  102   69    55 0.866   4.97
 2.10 Intr +  59693  59722   30  0  0   73   92    30 0.338   0.00
 2.11 Term +  70150  70295  146  2  2   72   44   119 0.436   3.97
 2.12 PlyA +  70990  70995    6                               1.05

 3.10 PlyA -  71374  71369    6                               1.05
 3.09 Term -  84062  83924  139  1  1   95   37    42 0.767  -2.76
 3.08 Intr -  85756  85617  140  1  2   66   91   112 0.965   8.56
 3.07 Intr -  87369  87270  100  2  1   35   93    92 0.977   4.51
 3.06 Intr -  87780  87616  165  2  0   85   77   108 0.732   8.48
 3.05 Intr -  90721  90594  128  1  2  111  109    51 0.996   8.98
 3.04 Intr -  92383  92037  347  2  2  106   94   329 0.999  30.41
 3.03 Intr -  94553  94003  551  1  2  107   65   446 0.905  36.71
 3.02 Intr -  96273  95954  320  0  2   88   94   254 0.991  20.76
 3.01 Init -  97745  97743    3  2  0   66   66     0 0.517  -4.40
 3.00 Prom -  98259  98220   40                              -5.36

 4.00 Prom +  99459  99498   40                              -3.66
 4.01 Init + 100001 100163  163  1  1  108   94   219 0.999  22.39
 4.02 Intr + 103103 103237  135  0  0   69   67    83 0.587   4.84
 4.03 Intr + 105119 105177   59  0  2  101   49    33 0.609  -0.70
 4.04 Intr + 105473 105596  124  1  1  110   81   163 0.865  17.96
 4.05 Intr + 107815 107945  131  2  2  105   -4    67 0.792  -0.39
 4.06 Intr + 108639 108746  108  2  0   36   94    88 0.773   4.68
 4.07 Intr + 108830 108892   63  1  0   84  111    -8 0.459   0.01
 4.08 Intr + 109083 109190  108  2  0   39   59    90 0.676   1.68
 4.09 Intr + 110841 111043  203  2  2   18   86   214 0.919  12.28
 4.10 Intr + 111123 111238  116  0  2   72   82    58 0.913   3.69
 4.11 Intr + 111405 111571  167  1  2   96   69    65 0.846   5.08
 4.12 Term + 112638 112667   30  2  0  102   48    22 0.614  -2.55
 4.13 PlyA + 112758 112763    6                               1.05

 5.12 PlyA - 112921 112916    6                               1.05
 5.11 Term - 113154 113125   30  0  0   99   42    15 0.021  -4.15
 5.10 Intr - 119793 119678  116  1  2   98  110    98 0.996  13.17
 5.09 Intr - 121576 121520   57  2  0   74  115    15 0.757   1.66
 5.08 Intr - 122692 122552  141  2  0   99   97   140 0.868  16.32
 5.07 Intr - 126727 126692   36  2  0  125   90   -12 0.617   0.93
 5.06 Intr - 127042 126967   76  1  1  121   81    72 0.955   8.89
 5.05 Intr - 132829 132686  144  1  0   25  107    82 0.483   4.28
 5.04 Intr - 136561 136482   80  2  2   23  109    16 0.435  -3.53
 5.03 Intr - 137699 137554  146  1  2   85  111   162 0.374  18.13
 5.02 Intr - 152963 152879   85  0  1   75   63     9 0.208  -4.02
 5.01 Init - 153333 153309   25  0  1  102   98    24 0.684   4.49
 5.00 Prom - 160755 160716   40                              -4.56

 6.00 Prom + 161058 161097   40                              -5.06
 6.01 Init + 169147 169202   56  0  2  104   72    53 0.271   6.06
 6.02 Intr + 172584 172816  233  0  2   88   82   127 0.691   9.52
 6.03 Intr + 173766 173794   29  1  2   78   93    30 0.507   0.33
 6.04 Intr + 178852 178917   66  0  0   77   97    69 0.709   5.80
 6.05 Intr + 183696 183839  144  2  0   84   95    93 0.992  10.08
 6.06 Intr + 199370 199863  494  1  2   96   34   257 0.335  12.90
 6.07 Intr + 205252 205353  102  1  0   68   61    64 0.441   0.99
 6.08 Intr + 206574 206648   75  0  0   90   86    45 0.797   3.13
 6.09 Intr + 206812 206926  115  1  1   88   70    83 0.887   6.95
 6.10 Term + 207255 207299   45  2  0   99   49    30 0.827  -2.59
 6.11 PlyA + 208354 208359    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:73850333_74061904|GENSCAN_predicted_peptide_1|57_aa
MGFRHVGQAGLKLLTSGRGQQVKVEFITNGQWFNQSCLYNDAFIKTQKDLIEEFPNS

>gi568815584f:73850333_74061904|GENSCAN_predicted_CDS_1|174_bp
atggggtttcgccatgttggccaggctggtctcaaactcctgacctcaggtaggggacag
caggtgaaggttgagtttatcaccaatggccagtggtttaatcaatcatgtctatataat
gacgccttcatcaaaacccaaaaggacctgattgaggagtttccaaatagctga

>gi568815584f:73850333_74061904|GENSCAN_predicted_peptide_2|446_aa
MVVSGAAGACGSVAGQASDISMTLSRDAGQRQQAVAPGQPPYVAEQLRESCPAGVDVYFD
NDHKGKQLMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDK
FEPGILQLSQWFKEGKLKLLVQFVQNTSIPLGQGLVESEAKDITCLSLLPVTEASECSRL
MLPGLGSSAEHLVFVQDEAEDSGNDFLSSESTDSSIPWFLRVQELAHDSLIAATRAQLAK
NAKTSSNGENVHLGSGDGQSKDSGPLPQVEKKLKCTVEGCDRTFVWPAHFKYHLKTHRND
RSFICPAEGCGKSFYVLQRLKVHMRTHNGEKPFMCHESGCGKQFTTAGNLKNHRRIHTGE
KPFLCEAQGCGRSFAEYSSLRKHLVVHSDISHPLNQKSGRMETESLGLEDIEDNLDYYVV
RATSVNVDDPKEGGREYDKGILGTQD

>gi568815584f:73850333_74061904|GENSCAN_predicted_CDS_2|1341_bp
atggttgtcagtggggccgcaggtgcctgtggatctgtggctgggcaggctagcgatatc
agtatgacactctctcgagatgctgggcagcggcaacaagctgtagctcctggtcagcca
ccgtatgtggctgaacaactccgtgaatcatgcccagctggagtggatgtttattttgac
aatgaccataagggtaaacaactgatgaatgagaacagccacatcatcctgtgtggtcaa
atttctcagtacaacaaagatgtgccttatcctcccccgctatcccctgctatagaggca
atccagaaagaaagaaacatcacaagggaaagatttctggtattaaattataaagacaaa
tttgagcctggcattctacagctgagtcagtggtttaaagaaggaaagctaaagctcctg
gtacagtttgttcagaatacgtccatcccattgggacaggggcttgtagaatcagaagct
aaagatattacttgcttgtccctccttcccgtgactgaagcctcagaatgcagtcggcta
atgttaccaggtctgggctcttcagctgagcacttagtgtttgtacaggatgaggcagaa
gattcagggaatgatttcctctccagtgagagcacagacagtagcattccatggttcctc
cgggttcaggagttggcccatgacagtttgattgctgctactcgtgcacaactggcaaag
aatgcaaaaaccagcagcaatggagaaaatgtccaccttggttctggtgatgggcagtca
aaagattctgggccccttcctcaagtggaaaagaagctcaagtgtacagttgaaggttgt
gaccggacatttgtatggccagctcactttaaataccacctcaagactcatcgaaatgac
cgctccttcatctgtcctgcagaaggttgtgggaaaagcttctatgtgctgcagaggctg
aaggtgcacatgaggacccacaatggagagaagccctttatgtgccatgagtctggctgt
ggtaagcagtttactacagctggaaacctgaagaaccaccggcgcatccacacaggagag
aaacctttcctttgtgaagcccaaggatgtggccgttcctttgctgagtattctagcctc
cgaaaacatctggtggttcactcagatatatctcatcctctcaaccagaagtcaggtaga
atggagacggagagtttgggacttgaagacatagaggacaatttagattattatgttgta
agagccaccagtgtgaatgttgatgaccctaaagagggtggcagggaatatgacaagggg
atattaggaacacaggattga

>gi568815584f:73850333_74061904|GENSCAN_predicted_peptide_3|630_aa
MIFPPESFADTEAGEELSGDGLVLPRASKLDEFLSPEEEIDSTSDSTGSIYQNLQELKQK
GRWCLLESLFQSDPESDENLSEDEEDLESFFQDKDRGMVQVQCPQALRCGSTRRCSSLNN
LPSNIPRPQTQPPSGSRPPSQHRSVSSWASSITVPRPFRMTLREARKKAEWLGSPASFEQ
ERQRAQRQGEEEAECHRQFRAQPVPAHVYLPLYQEIMERSEARRQAGIQKRKELLLSSLK
PFSFLEKEEQLKEAARQRDLAATAEAKISKQKATRRIPKSILEPALGDKLQEAELFRKIR
IQMRALDMLQMASSPIASSSNRANPQPRTATRTQQEKLGFLHTNFRFQPRVNPVVPDYEG
LYKAFQRRAAKRRETQEATRNKPFLLRTANLRHPQRPCDAATTGRRQDSPQPPATPLPRS
RSLSGLASLSANTLPVHITDATRKRESAVRSALEKKNKADESIQWLEIHKKKSQAMSKSV
TLRAKAMDPHKSLEEVFKAKLKENRNNDRKRAKEYKKELEEMKQRIQTRPYLFEQVAKDL
AKKEAEQWYLDTLKQAGLEEDFVRNKGQGTRAVQEKETKIKDFPRFQETTKLSIRDPEQG
LEGSLEQPASPRKVLEELSHQSPENLVSLA

>gi568815584f:73850333_74061904|GENSCAN_predicted_CDS_3|1893_bp
atgatatttccccccgagtccttcgcagacacagaggcaggagaggagctgtccggggat
gggctggttttgcccagggccagcaaacttgacgagttcctcagcccagaggaggagata
gattctacttctgactcaactgggagcatttaccagaacttacaggaactgaagcagaaa
gggagatggtgtctgttggagtctctctttcagtctgacccagagagtgatgaaaacctc
tctgaagatgaggaggacctggagagtttcttccaagacaaggacagggggatggtgcag
gtccagtgcccgcaggctctgaggtgtggctccacaaggcgctgcagctccctgaacaac
cttccctccaacattcccaggcctcagacccagccaccctcaggctcccggcctccctcc
cagcacagaagcgtcagctcctgggcatcatccattactgtccctcggccattccgcatg
acgctgcgcgaggcccggaagaaggccgagtggctgggctcacctgcctcctttgagcag
gagaggcagcgggcccagaggcagggtgaggaagaggccgagtgccacaggcagttccgg
gcacagcctgtgcctgcacatgtctacctgcccctctaccaagagatcatggagcgcagc
gaggcccgaaggcaggcagggatccagaagaggaaggaactgctcctctcttctttgaag
cccttcagcttcctggagaaggaggagcagctaaaggaagctgctcgacagagagacttg
gcagccacagctgaagccaagatctccaagcagaaggccaccagaaggattcccaagtcc
attctggagccagcccttggggataaactccaggaagctgagctcttcaggaaaattcgc
atccaaatgagagccctggacatgctccagatggcctcttcccctatcgcctcctctagt
aaccgggctaacccacagccccgcacagccacccgaacccagcaggaaaagcttgggttt
ctgcacactaacttcagattccagcctcgggtgaatcctgtggtccctgactatgagggc
ctttacaaggccttccagagaagagcagccaaaagaagagaaacccaagaggccactcgc
aacaagcccttcttgctgaggaccgccaacctgcgccaccctcagcggccctgtgatgct
gccaccaccggaaggaggcaggattccccacagccaccagctacacccctgccaaggagt
cgttctctgagcggccttgcttccctctctgccaacactctccctgtgcacatcacagat
gccaccaggaagagggaatctgcagtcagaagtgcacttgaaaaaaagaacaaagcagat
gagagtattcagtggctggagatacacaaaaagaagtctcaagcaatgtccaaatctgtg
accttgcgtgcaaaagccatggatccccataaaagcctggaggaagtgttcaaagcaaag
ctgaaagagaaccggaacaatgaccgtaaaagagcgaaagaatataagaaagaactggag
gaaatgaagcagcgaatacaaacaaggccctatctctttgaacaagttgccaaggatcta
gccaagaaagaagcagaacagtggtatctagacaccctgaagcaggctgggctggaggaa
gactttgtgagaaacaagggtcaaggcacccgggctgttcaagagaaagagaccaaaatc
aaggattttcccaggttccaagaaactacaaaactcagcatcagagatccagagcagggt
ttagaaggatctctagaacagcctgcaagccccaggaaagtactggaggagctgtctcat
cagtcaccagaaaatctcgtatcacttgcttaa

>gi568815584f:73850333_74061904|GENSCAN_predicted_peptide_4|468_aa
MAARLVSRCGAVRAAPHSGPLVSWRRWSGASTDTVYDVVVSGGGLVGAAMACALGYDIHF
HDKKILLLEAGPKKVLEKLSETYSNRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQV
WDACSEALIMFDKDNLDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPF
PMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSE
ATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSD
ADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPR
VALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHN
TALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK

>gi568815584f:73850333_74061904|GENSCAN_predicted_CDS_4|1407_bp
atggcggcccggcttgtcagccgatgcggggctgtgcgtgcagctccccacagcggcccg
ctggtgtcctggcgcaggtggtccggcgcctcaacagacaccgtgtatgacgtggtggtg
tcgggtggaggcctggtgggcgctgccatggcctgtgccttgggatatgatattcacttt
catgacaagaaaatcctgttgctcgaagcaggtccaaagaaagtactggagaaattgtca
gaaacttacagcaacagggtcagctccatttcccctggctctgcaacgcttctcagtagt
tttggtgcctgggaccatatctgcaacatgagatacagagcctttcggcgaatgcaggtg
tgggacgcctgctcagaggccctgataatgtttgataaggataatttagatgacatgggc
tatatcgtggagaatgatgtcatcatgcatgctctcactaagcagttggaggctgtgtct
gaccgagtgacggttctctacaggagcaaagccattcgctatacctggccttgtccattt
cctatggccgactccagcccttgggttcatattaccctaggtgatggcagcaccttccag
accaaattgttgataggtgcagatggtcacaactccggagtacggcaggctgttggaatc
cagaatgtgagctggaactatgaccagtctgctgttgtggctactctgcatttatcagag
gccacagaaaacaacgtagcctggcagagatttcttccctctgggcctattgctctgctc
ccgctctcagacaccttgagttccttggtttggtccacgtcccatgaacatgcagcagag
ctagttagcatggatgaggaaaaatttgtggatgccgttaactctgccttttggagtgat
gctgaccacacggacttcatcgacacagctggtgccatgctgcagtatgctgtcagcctt
ctgaagcccactaaggtctcggctcgccagctgcccccaagcgtagccagggtggatgcc
aaaagccgagttctgtttcctcttgggttgggacatgctgctgagtacgtcaggcctcgg
gtggcgctcattggggatgcagcccacagagtccatccgcttgcaggacagggtgtcaac
atgggctttggggatatctccagcttggcccatcacctcagtacggcagccttcaatggg
aaggacttaggttccgtgagccacctcacaggttatgaaacagaaagacagcgtcacaac
actgctcttctggctgctacagacttactaaaaaggctctattctaccagtgcctccccg
cttgtgttgctcaggacgtggggcttgcaggccacaaatgcagtgtctccactcaaagaa
cagattatggcctttgcaagcaaatga

>gi568815584f:73850333_74061904|GENSCAN_predicted_peptide_5|311_aa
MGSFGYEQGSWVTPVNKKISALEELIFYQRNTDNKYQNQQTWFEGIFLSSMCPINVSAST
LYGIMFDAGSTGTRIHVYTFVQKMPGQLPILEGEVFDSVKPGLSAFVDQPKQGAETVQGL
LEVAKDSIPRSHWKKTPVVLKATAGLRLLPEHKAKALLFEVKEIFRKSPFLVPKGSVSIM
DGSDEGILAWVTVNFLTGEVGFEPCYAEVLRVVRGKLHQPEEVQRGSFYAFSYYYDRAVD
TDMIDYEKGGILKVEDFERKAREVCDNLENFTSGSPFLCMDLSYITALLKDGFGFADSTV
LQKVQYTCNKG

>gi568815584f:73850333_74061904|GENSCAN_predicted_CDS_5|936_bp
atgggcagttttggttatgagcaaggttcttgggttacaccagtaaacaaaaagatttct
gctcttgaggagcttatattctatcagaggaacacagacaataaatatcagaaccagcag
acttggtttgagggtatcttcctgtcttccatgtgccccatcaatgtcagcgccagcacc
ttgtatggaattatgtttgatgcagggagcactggaactcgaattcatgtttacaccttt
gtgcagaaaatgccaggacagcttccaattctagaaggggaagtttttgattctgtgaag
ccaggactttctgcttttgtagatcaacctaagcagggtgctgagaccgttcaagggctc
ttagaggtggccaaagactcaatcccccgaagtcactggaaaaagaccccagtggtccta
aaggcaacagcaggactacgcttactgccagaacacaaagccaaggctctgctctttgag
gtaaaggagatcttcaggaagtcacctttcctggtaccaaagggcagtgttagcatcatg
gatggatccgacgaaggcatattagcttgggttactgtgaattttctgacaggggaggtg
ggctttgagccctgctatgccgaagtgctgagggtggtacgaggaaaacttcaccagcca
gaggaggtccagagaggttccttctatgctttctcttactattatgaccgagctgttgac
acagacatgattgattatgaaaaggggggtattttaaaagttgaagattttgaaagaaaa
gccagggaagtgtgtgataacttggaaaacttcacctcaggcagtcctttcctgtgcatg
gatctcagctacatcacagccctgttaaaggatggctttggctttgcagacagcacagtc
ttacagaaagtccagtatacctgtaacaaaggttaa

>gi568815584f:73850333_74061904|GENSCAN_predicted_peptide_6|452_aa
MPSKGKDKKKGKSKGKDTKKLIKTDESVVDRAKANASLWEARLEVTELSRIKYRDTSRIL
AKSNEDLKKKQCKMEKDIMSVLSYLKKQDQEKDNMVDEEIDFQKGQIEKLKQQLNETKEK
AQEEKDKLEQKYTRQINELEGQFHQKAKEIGMIHTELKAVRQFQKRKIQVERELDDEIND
LLVKEKIMQLVQQRSQIQTLQKKVVNLETALSYMTKEFESEVLKLQQHAMIENQAGQVEI
DKLQHLLQMKDREMNRVKKLAKNILDERTEVERFFLDALHQVKQQILISRKHYKQIAQAA
FNLKMRAACTGRTEYPKIRTFDGREHSTNSVNQDLLEAEKWTHIEGNVDIGDLTWEQKEK
VLRLLFAKMNGCPSRKYNQSSRPPVPDYVVSDSGETKEFGDESKLQDKIFITQQIAISDS
SGEVVLPTIPKEPQESDTVGSQSHYNLEDKGL

>gi568815584f:73850333_74061904|GENSCAN_predicted_CDS_6|1359_bp
atgccgtcgaagggaaaggacaaaaagaaaggcaagagcaaaggcaaagacacgaagaag
ttaataaaaacagatgaatctgtggtggacagagccaaggccaatgcctccctttgggag
gccaggttggaagtcacagaactctctaggattaagtatcgtgatacttcacggatactg
gcaaaaagtaatgaggacttaaagaaaaagcaatgtaaaatggagaaagacataatgtca
gtattaagttacctgaagaagcaggatcaggagaaagataatatggtagatgaagaaatt
gactttcagaaaggacagattgaaaaactgaaacagcaattaaatgaaacaaaggaaaaa
gcccaagaggagaaggataaattggaacaaaagtataccaggcaaattaatgaactagag
ggacagttccatcaaaaagccaaagaaattggcatgattcacacagagctgaaagcagta
agacaattccagaagagaaaaatccaagtggagagagagttagatgatgagatcaatgat
ctgttggttaaggaaaagattatgcaacttgtccagcagagatcacaaatccaaaccctt
cagaagaaggtagtaaacttggagactgctctgagttacatgaccaaagagtttgagagt
gaagttttaaaactgcagcaacacgcaatgatagagaaccaagcaggtcaggtagaaatt
gacaagctgcagcaccttcttcagatgaaggacagggaaatgaatcgtgtgaagaagctg
gccaagaacatactggatgagagaacagaagtggaaagattctttttagatgctctgcac
caagtgaagcaacagatcctaattagcaggaagcattataagcagatagcacaagctgct
ttcaatttaaaaatgagagcagcatgtacaggaagaacagaatatcccaaaatcagaaca
tttgatggcagagagcacagcaccaatagtgtgaatcaggatcttctggaggccgaaaaa
tggacacatattgaaggaaatgtggatattggagatttgacctgggagcagaaggaaaaa
gtattgcgattgctctttgcaaaaatgaatggctgtccttctaggaaatacaaccagagt
tctaggcctccagttccagactatgttgtttctgacagtggggaaacaaaggaatttggg
gatgaaagtaagcttcaagataaaatcttcatcacccagcaaattgcaatatcagactct
tctggtgaagtggtgctacccactattccaaaagaacctcaggagtctgacacagtggga
agtcagagtcattacaacctagaggacaaaggcttataa