GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:33:09

Sequence gi568815583f:65769586_65987837 : 218252 bp : 44.09% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -     84     79    6                               1.05
 1.02 Term -   1887   1587  301  2  1  101   43   261 0.928  17.59
 1.01 Init -   2527   2229  299  1  2   38    8   154 0.403  -0.90
 1.00 Prom -  36319  36280   40                              -2.26

 2.02 PlyA -  37289  37284    6                               1.05
 2.01 Sngl -  47081  46674  408  2  0   72   32   218 0.982  10.89
 2.00 Prom -  48453  48414   40                              -4.66

 3.00 Prom +  70384  70423   40                              -3.36
 3.01 Init +  99866 100040  175  1  1   87  100   199 0.936  18.59
 3.02 Intr + 107747 107942  196  0  1  110   94   150 0.999  16.27
 3.03 Intr + 108177 108370  194  0  2   96   92   152 0.999  15.54
 3.04 Intr + 110086 110166   81  2  0  107  110     6 0.950   4.31
 3.05 Term + 118116 118255  140  1  2   93   48   138 0.964   8.43
 3.06 PlyA + 118474 118479    6                               1.05

 4.20 PlyA - 119073 119068    6                               1.05
 4.19 Term - 128509 128349  161  2  2   71   48    57 0.702  -1.90
 4.18 Intr - 129349 129143  207  2  0   84   74   112 0.986   8.45
 4.17 Intr - 136556 136500   57  0  0   84   75    58 0.862   2.96
 4.16 Intr - 139550 139449  102  0  0   86   71    82 0.815   6.45
 4.15 Intr - 144388 144152  237  2  0  105  110   252 0.999  26.69
 4.14 Intr - 146013 145885  129  1  0   78   85   100 0.976   9.37
 4.13 Intr - 146691 146563  129  1  0   97   63   118 0.396  10.87
 4.12 Intr - 147371 147027  345  0  0   60   77    96 0.417   1.06
 4.11 Intr - 148483 148381  103  1  1   20   98   108 0.476   4.75
 4.10 Intr - 148940 148840  101  0  2   77   74    83 0.483   5.63
 4.09 Intr - 151981 151817  165  2  0   75   25    81 0.473   0.43
 4.08 Intr - 152887 152753  135  2  0  105   79    87 0.826  10.04
 4.07 Intr - 153384 153238  147  1  0  106   72   175 0.999  17.91
 4.06 Intr - 158942 158840  103  2  1  145   91    43 0.884  10.05
 4.05 Intr - 160298 160135  164  0  2  105  117    82 0.994  12.49
 4.04 Intr - 161358 161238  121  0  1   98   90    76 0.783   8.87
 4.03 Intr - 162855 162749  107  1  2   43   94    19 0.391  -2.07
 4.02 Intr - 168646 168552   95  0  2   73   89    67 0.749   4.91
 4.01 Init - 168964 168906   59  1  2   90   36    42 0.558  -0.02
 4.00 Prom - 169105 169066   40                              -6.76

 5.00 Prom + 175010 175049   40                              -4.66
 5.01 Init + 176995 177043   49  0  1   75   58    48 0.346  -0.39
 5.02 Term + 180481 180593  113  2  2  101   38   156 0.988  10.62
 5.03 PlyA + 181049 181054    6                               1.05

 6.08 PlyA - 182735 182730    6                               1.05
 6.07 Term - 184139 184104   36  2  0  108   44    49 0.590  -0.16
 6.06 Intr - 188136 187962  175  2  1   90   95    95 0.898  10.34
 6.05 Intr - 195535 195323  213  0  0  140   80   200 0.605  22.23
 6.04 Intr - 201104 200968  137  2  2   73  110    28 0.228   2.87
 6.03 Intr - 211313 211193  121  1  1   93  127    73 0.865  12.20
 6.02 Intr - 212903 212657  247  0  1  123   75   403 0.999  39.02
 6.01 Intr - 217603 217464  140  0  2   -6   84   103 0.279   0.61

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:65769586_65987837|GENSCAN_predicted_peptide_1|199_aa
MCRHRPGGSECWQPREGPAFPAEGREALPTALGLRINKYKNYYEVLGVTKDSGDEDLKKA
YRKLALKFHPDKNHAPGATDAFKKVGNAYAVLSNPEKRKQSGTGQTIKTQTENLGGVYYV
SKDFKNEYKGMLLQKAEKSVEEDYVTNIRNNCWKERQQKTDMQYAAKVYRGDRLRRKSDA
LSMDNCKELERLTGLYKGG

>gi568815583f:65769586_65987837|GENSCAN_predicted_CDS_1|600_bp
atgtgtcgacatcgtccaggaggctctgaatgctggcaaccgcgagaaggcccagcgttt
cctgcagaaggccgagaagctctacccactgcccttggcctgcgcataaacaaatataaa
aattactatgaagtacttggagttacgaaagatagtggtgatgaagatttgaaaaaagct
tatagaaagcttgctttgaagtttcatccagacaaaaaccatgcacctggagcaacagat
gcttttaaaaaggttgggaatgcttatgctgttttaagtaatccagaaaagcgaaaacaa
tctggaacagggcaaactattaaaacgcagacagaaaacttgggtggtgtttattatgtc
agcaaggactttaaaaatgaatataaaggaatgttattacaaaaggcagaaaagagtgtg
gaggaagattatgtgactaatattcgaaataactgctggaaagaaagacaacaaaaaaca
gatatgcagtatgcagcaaaagtataccgtggtgatcgactccgaaggaagtcagatgcc
ttgagcatggacaactgtaaagaattagagcggcttaccggtctttataaaggaggatga

>gi568815583f:65769586_65987837|GENSCAN_predicted_peptide_2|135_aa
MAGASASHRGQSGSGNFGGSHGGSFGGNDNFGHGGNLSGLGGFNDSSGGGGYGGSGDGYN
GFSNDGSNFGGGGSYDDFGNYNNRSSNFRPMKGRNFGGRSSGPYGGGGQYFAQPRNQGGR
GGSSSSSSYGSGRRF

>gi568815583f:65769586_65987837|GENSCAN_predicted_CDS_2|408_bp
atggctggtgcttcagccagccacagaggtcaaagtggctctggaaactttggtggtagt
catggaggtagtttcggtgggaatgacaattttggtcatggaggaaacttaagtggtctt
ggtggctttaatgacagctctggtggtggtggatatggtggcagtggggatgggtataat
ggatttagtaatgatggaagcaattttgggggtggtggaagctacgatgattttggcaat
tacaacaatcggtcttcaaatttcagacccatgaagggaagaaactttggaggcagaagc
tctggcccctatggtggtggaggccaatactttgcccaaccacgaaaccaaggtggccgt
ggcggttccagtagcagcagtagctatggcagtggcagaagattttaa

>gi568815583f:65769586_65987837|GENSCAN_predicted_peptide_3|261_aa
MAQRQGGALHPVRQLKLGARVTPAATPPGPTDTTAAPALSLLGRAMGTRDDEYDYLFKVV
LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA
ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP
TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSNNV
VPIHVPPTTENKPKVQCCQNI

>gi568815583f:65769586_65987837|GENSCAN_predicted_CDS_3|786_bp
atggcgcagcggcagggaggggctcttcacccagtccggcagttgaagctcggcgctcgg
gttacccctgcagcgacgccccctggtcccacagataccactgctgctcccgccctttcg
ctcctcggccgcgcaatgggcacccgcgacgacgagtacgactacctctttaaagttgtc
cttattggagattctggtgttggaaagagtaatctcctgtctcgatttactcgaaatgag
tttaatctggaaagcaagagcaccattggagtagagtttgcaacaagaagcatccaggtt
gatggaaaaacaataaaggcacagatatgggacacagcagggcaagagcgatatcgagct
ataacatcagcatattatcgtggagctgtaggtgccttattggtttatgacattgctaaa
catctcacatatgaaaatgtagagcgatggctgaaagaactgagagatcatgctgatagt
aacattgttatcatgcttgtgggcaataagagtgatctacgtcatctcagggcagttcct
acagatgaagcaagagcttttgcagaaaagaatggtttgtcattcattgaaacttcggcc
ctagactctacaaatgtagaagctgcttttcagacaattttaacagagatttaccgcatt
gtttctcagaagcaaatgtcagacagacgcgaaaatgacatgtctccaagcaacaatgtg
gttcctattcatgttccaccaaccactgaaaacaagccaaaggtgcagtgctgtcagaac
atctaa

>gi568815583f:65769586_65987837|GENSCAN_predicted_peptide_4|888_aa
MGIDEDRKTPKHQLPGAKKGLLTYKTRQLDQVIPSVPFSSSIMGYLPTIRTVELTAYPLT
GRVDAQIHPSGQKHSFFPSCQKFSGSQGEVCAVSCAAGTYGPNCSSICSCNNGGTCSPVD
GSCTCKEGWQGLDCTLPCPSGTWGLNCNESCTCANGAACSPIDGSCSCTPGWLGDTCELP
CPDGTFGLNCSEHCDCSHADGCDPVTGHCCCLAGWTGIRCDSTCPPGRWGPNCSVSCSCE
NGGSCSPEDGSCECAPGFRGPLCQRICPPGFYGHGCAQPCPLCVHSSRPCHHISGICECL
PGFSGALCNQGQDSVDLGEGSMDHAGLQLGLSLKGGKGRKAFCVEEAAWAKHRDMGMLQG
TADGYAVHILYPRGCGIRDVGESGNRKQKAVEQYREHWTDCAQLCSCANNGTCSPIDGSC
QCFPGWIGKDCSQACPPGFWGPACFHACSCHNGASCSAEDGACHCTPGWTGLFCTQRKPH
LLASQPLRIPCCGLLATVGIVQTSREGGMQAAPGLVVPDSCPTRTEELCRGSSRPDWIQG
IDKPKVLEGCPAAFFGKDCGRVCQCQNGASCDHISGKCTCRTGFTGQHCEQRCAPGTFGY
GCQQLCECMNNSTCDHVTGTCYCSPGFKGIRCDQAALMMEELNPYTKISPALGAERHSVG
AVTGIMLLLFLIVVLLGLFAWHRRRQKEKGRDLAPRVSYTPAMRMTSTDYSLSDSHFQIS
ALEARYPPEDFYIELRHLSRPAEPHSPGACGMDRRQNTYIMDKGFKDYMKESVCSSSTCS
LNSSENPYATIKDPPILTCKLPESSYVEMKSPVHMGSPYTDVPSLSTSNKNIYEVEPTVS
VVQEGCGHNSSYIQNAYDLPRNSHIPGHYDLLPVRQSPANGPSQDKQS

>gi568815583f:65769586_65987837|GENSCAN_predicted_CDS_4|2667_bp
atggggatagatgaagatagaaagacacccaagcatcaacttccaggtgctaagaaaggt
ttactcacctataaaacaaggcagctggaccaggtgattcccagtgtccctttcagctct
agcatcatgggctatctacccaccattaggacagtggagctaacagcatacccacttacc
ggtagagtggacgcccagattcacccctcaggacagaagcactcattcttccccagctgc
cagaaatttagtggctcgcagggagaggtctgtgccgtttcctgtgcagcagggacctat
ggccccaactgctcgtccatctgtagctgtaacaatggtggcacctgctccccagtagat
ggctcctgtacctgcaaggaagggtggcagggcctggactgcaccctgccatgtcccagt
gggacgtggggcctgaactgcaacgagagctgcacctgtgccaatggggcagcctgcagc
cccatagacggctcctgctcctgcactcctggctggctgggagacacctgtgagctgcct
tgcccggatggcacatttgggctgaactgcagtgaacactgtgactgcagccatgctgat
ggatgtgaccccgtcacaggccactgctgctgcctggccggatggacaggcatccgctgt
gacagcacgtgtccacctggccgctggggccccaactgctctgtctcctgcagctgtgag
aatggaggctcctgctccccagaggatgggagctgcgagtgtgcccctggcttccgagga
cccttatgccagagaatctgcccccctgggttctatggccacggctgcgcccagccatgc
cccctctgcgtgcacagcagcaggccctgccaccacatcagcggcatctgtgagtgcctc
ccaggattctctggagctctctgcaaccaaggacaagacagtgtggatttgggtgaaggc
tccatggaccatgcaggacttcagctgggccttagcttgaaaggtggaaaaggaagaaaa
gcattctgtgtagaggaagcagcttgggcaaagcacagagacatgggcatgctacaggga
acagctgatggatatgctgtacatattctctaccctcgtggttgtggaatccgtgatgtt
ggtgaaagtggtaatagaaagcagaaggctgtggaacagtacagggagcactggactgac
tgtgcccagctctgctcctgtgccaacaacgggacctgcagccctatcgatggctcctgc
cagtgctttcctggatggattggcaaggactgctcacaggcttgcccacccgggttctgg
ggccccgcctgcttccacgcatgcagctgccacaacggggcgagctgcagcgccgaggac
ggggcctgccactgcacccctggctggactggactcttctgcacacagcgtaagccccac
ctcctggcctcccagccacttagaataccatgctgcggcctactggccactgtgggcatt
gtccagaccagcagggagggaggaatgcaggcagccccaggactggtggtacctgactcc
tgccccacgagaactgaggagctctgcaggggcagctccagacctgactggattcagggg
attgacaagcccaaagtcctggaaggctgcccagcagcattttttgggaaggactgtggg
cgcgtatgccagtgtcagaatggcgccagctgtgaccacatcagtggcaagtgcacctgc
cgcacaggcttcaccgggcaacactgtgagcagagatgtgccccaggaacctttggctat
gggtgtcagcagctatgtgagtgcatgaacaactccacctgtgaccatgtcaccggcacc
tgttactgcagccctggcttcaaaggaatcaggtgtgaccaagctgccctcatgatggag
gagctgaatccctacaccaagatcagcccagcactgggtgcagagcggcactcggtgggt
gctgtcacaggcatcatgctcctgttattcctcattgtggtgctgctgggcctatttgcc
tggcatcggcggcggcagaaagagaagggccgagacctggctccccgtgtctcctacaca
cctgccatgaggatgaccagcaccgactactccctctcagactcccatttccagatcagt
gccctggaggccaggtacccgcccgaggacttctacattgaacttagacacctcagccgc
cccgctgagccacactcaccaggtgcttgtggaatggatagacgtcagaacacatacatt
atggacaaaggcttcaaagattacatgaaagaatccgtgtgcagttctagtacttgttcc
ttgaatagcagtgaaaacccttacgccacaattaaggacccacccatcctcacctgcaag
cttccagaaagcagctatgtagaaatgaagtcgcctgtgcacatggggtctccgtacaca
gatgtgccatccttgtcgacatctaataaaaatatatatgaagttgagcccacagtcagt
gtggtccaagaaggttgcggtcataactccagctatatccagaatgcatacgacctacct
aggaacagccatattcctggtcattatgacctcctcccagtaagacagagccctgccaat
gggccgtcccaggacaagcaatcttaa

>gi568815583f:65769586_65987837|GENSCAN_predicted_peptide_5|53_aa
MGFHHVGQAALELLSSGHSGQDQSSSSSERPLGVNNNSSSSSGIIIIINSNNS

>gi568815583f:65769586_65987837|GENSCAN_predicted_CDS_5|162_bp
atggggtttcaccatgttggccaggctgctctcgaactcctgagctcagggcactcaggc
caggaccagtcatcctcttcaagtgagagaccccttggtgtaaataacaacagcagcagc
agtagtggcatcatcatcatcatcaacagcaataacagctaa

>gi568815583f:65769586_65987837|GENSCAN_predicted_peptide_6|356_aa
XNCLINCSYKFKSLSVKKTVVKPFALLGTQGHTKPGPQSLKQSAGEGGCDSDHWGPHCSN
RCQCQNGALCNPITGACVCAAGFRGWRCEELCAPGTHGKGCQLPCQCRHGASCDPRAGEC
LCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPP
GTFGQNCSQDCPCHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDCHNGG
QCSPTTGACECEPGYKGPRCQERLCPEGLHGPGCTLPCPCDADNTISCHPVTGACTCQPG
WSGHHCNESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMDIGSGILFTEM

>gi568815583f:65769586_65987837|GENSCAN_predicted_CDS_6|1071_bp
nntaactgcctgatcaactgtagttacaaatttaaaagcctgtcggtgaagaagacggtg
gtgaagccatttgccctcttggggacccaggggcacactaagcctggaccccaaagtctg
aagcagtcagcaggggaagggggctgcgacagcgaccactgggggccccactgcagcaac
cggtgccagtgccagaacggcgccctgtgtaaccccatcacaggcgcctgcgtgtgcgcc
gccggcttccgtggatggcgctgcgaggagctctgcgcacctggcacccacggcaaggga
tgccagctgccgtgccagtgccgacacggtgccagctgcgacccccgcgccggcgagtgc
ctctgcgcacctggctacaccggcgtctactgcgaggagctgtgccctcctgggagccat
ggagctcactgtgagctgcgctgcccctgtcagaatgggggcacctgccaccacatcact
ggcgagtgtgcctgccccccaggctggacgggagcagtgtgtgcccagccctgcccacca
gggacatttggccagaactgcagccaggattgtccttgccaccatggagggcagtgtgac
cacgtgactggacagtgccactgtacagctggatacatgggggacaggtgccaagaggag
tgccccttcgggtccttcggcttccagtgctcacagcactgtgactgccacaatgggggg
cagtgttcacccaccacgggtgcctgcgagtgtgagcctggctacaagggcccacgctgc
caggagcgactgtgcccggagggcctgcatggcccaggctgcaccctgccctgcccctgt
gacgctgacaacaccatcagctgccacccagtaactggagcttgtacctgccagccaggc
tggtctggtcaccactgcaatgaatcctgccctgttggctactatggcgatggctgccag
ctgccttgcacctgtcagaatggcgccgactgccacagcatcactgggggctgcacttgt
gctccgggcttcatggacattggaagtggaatcctgttcactgaaatgtga