GENSCAN 1.0	Date run:  5-Nov-116	Time: 08:16:54

Sequence gi568815593r:73452800_73662881 : 210082 bp : 40.64% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   4249   4382  134  2  2  105   44   114 0.645   5.97
 1.02 PlyA +   5104   5109    6                               1.05

 2.00 Prom +   7734   7773   40                              -5.75
 2.01 Init +  17143  17297  155  0  2   97   48   162 0.250  12.60
 2.02 Term +  29663  29834  172  2  1   59   40   107 0.004  -0.68
 2.03 PlyA +  32246  32251    6                               1.05

 3.00 Prom +  39656  39695   40                              -4.65
 3.01 Init +  40733  40793   61  1  1   66   97    40 0.034   4.17
 3.02 Intr +  45322  45593  272  2  2   50   26   238 0.001  10.14
 3.03 Intr +  46335  46403   69  2  0   91  106   116 0.994  12.16
 3.04 Intr +  49689  49775   87  2  0   89   49   105 0.983   5.95
 3.05 Intr +  50117  50318  202  1  1  118   82   184 0.996  18.74
 3.06 Intr +  51548  51604   57  0  0   75   91   130 0.927   9.94
 3.07 Term +  55962  56455  494  1  2   58   49   426 0.117  29.48
 3.08 PlyA +  59947  59952    6                               1.05

 4.09 PlyA -  62612  62607    6                               1.05
 4.08 Term -  67175  67101   75  2  0   78   42    94 0.073   0.66
 4.07 Intr -  79572  79364  209  1  2   87   53   171 0.072  11.37
 4.06 Intr - 100687 100607   81  2  0   47  103    81 0.666   4.19
 4.05 Intr - 101589 101523   67  0  1  100   87    19 0.742   0.56
 4.04 Intr - 102187 102062  126  1  0   49  106    99 0.991   7.76
 4.03 Intr - 102786 102689   98  1  2   52   73   110 0.982   4.71
 4.02 Intr - 104875 104776  100  1  1   18   85   103 0.614   1.76
 4.01 Init - 110082 109834  249  0  0   81   36   196 0.492  11.21
 4.00 Prom - 110422 110383   40                             -10.25

 5.00 Prom + 111171 111210   40                              -7.65
 5.01 Init + 112227 112698  472  2  1   53  -28   397 0.566  20.33
 5.02 Intr + 113203 113387  185  2  2   59   72    56 0.465  -0.31
 5.03 Intr + 115436 115528   93  1  0   57   89    52 0.718   1.44
 5.04 Intr + 115621 115805  185  0  2   78   69   143 0.998   9.06
 5.05 Intr + 116698 116876  179  1  2   93   77    66 0.879   4.64
 5.06 Intr + 117787 117912  126  2  0   35   80   189 0.394  12.53
 5.07 Intr + 119690 119801  112  0  1   67   17    15 0.061  -9.18
 5.08 Intr + 124153 124237   85  1  1   71   92    23 0.145  -0.10
 5.09 Intr + 125057 125206  150  1  0   44   35   147 0.312   4.44
 5.10 Intr + 125952 126053  102  2  0   80   76    88 0.973   6.25
 5.11 Intr + 126218 126351  134  1  2   58   95   102 0.977   6.42
 5.12 Intr + 126518 126576   59  2  2   74  111    25 0.987   1.01
 5.13 Term + 127078 127295  218  2  2  114   36   122 0.971   5.92
 5.14 PlyA + 128888 128893    6                               1.05

 6.00 Prom + 147882 147921   40                              -5.25
 6.01 Init + 158274 158505  232  2  1   69   75   137 0.653   8.97
 6.02 Intr + 165273 165451  179  1  2   46   58   113 0.536   2.82
 6.03 Term + 168133 168258  126  0  0   84   53    86 0.893   2.00
 6.04 PlyA + 168316 168321    6                               1.05

 7.04 PlyA - 168501 168496    6                               1.05
 7.03 Term - 173864 173357  508  1  1  126   50   298 0.467  22.69
 7.02 Intr - 178319 178162  158  2  2  111   26    74 0.112   1.39
 7.01 Init - 193698 193657   42  0  0   85   48    72 0.349   3.37
 7.00 Prom - 195216 195177   40                              -6.85

 8.00 Prom + 198915 198954   40                              -5.55
 8.01 Init + 200067 200207  141  2  0   66   80    89 0.574   6.08
 8.02 Term + 201063 201134   72  2  0  128   44    40 0.686   0.53
 8.03 PlyA + 201461 201466    6                              -0.45

 9.04 PlyA - 202768 202763    6                               1.05
 9.03 Term - 204070 203888  183  1  0   61   48   221 0.996  11.96
 9.02 Intr - 206338 206217  122  2  2   65   76    78 0.718   3.59
 9.01 Init - 208830 208689  142  0  1   78   70    74 0.712   4.94

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  30317  30138  180  2  0   40   48   234 0.851   7.93
S.002 Sngl -  45545  45216  330  2  0   41   52   375 0.806  22.97
S.003 Init +  45869  46000  132  1  0   48   86   171 0.993  11.10
S.004 Init +  86771  86839   69  1  0   91  110    67 0.896  10.30


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:73452800_73662881|GENSCAN_predicted_peptide_1|44_aa
XPHSVIPTPYATAVVISVLWNNLAMEILEKMRYIKKAVDFIAAL

>gi568815593r:73452800_73662881|GENSCAN_predicted_CDS_1|135_bp
ngccctcatagtgtcattcctactccatatgccactgctgtggtaatcagtgtgctgtgg
aacaacctggccatggaaattttggaaaagatgaggtacatcaagaaagcagttgacttt
attgcagcactttga

>gi568815593r:73452800_73662881|GENSCAN_predicted_peptide_2|108_aa
MSESVKRPGASKQDIRLMRTYEWGGPMAHEDLQTEAVLWPVRTYIQGWSRGLEVLERGCS
AAAVHFKVVPAYRAEPSVNQAQVFSLSVNCQLVGNSPLSHRCRLGEIK

>gi568815593r:73452800_73662881|GENSCAN_predicted_CDS_2|327_bp
atgtccgagagcgtgaagaggcctggagctagcaaacaagacataaggcttatgaggact
tatgaatggggtggtcccatggcccatgaggacttacaaacagaggcggtcctatggcct
gtgaggacttacatacaggggtggtcccgtggcctagaagttctggaaaggggctgtagt
gctgcagctgtccactttaaggtggtgcctgcatatcgtgcagaaccatctgtaaaccag
gcccaagtcttctctttgtctgtgaactgtcaacttgtgggaaactccccattaagccat
agatgcaggctgggagagataaaatga

>gi568815593r:73452800_73662881|GENSCAN_predicted_peptide_3|413_aa
MEQTARVCVSALPLTSTVALGNVNRPFLRRAQNFRIRAQWRLSGLNPNCAQDRALRPLCG
LSQRYGLRPKPAVSRRAYSRQPLEQEEENRDSLDHHKRCRACAGRNRVRGEMKETIMNQE
KLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNMFTNQGTVIHFNNPK
VQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVDGKAPLAT
GEDDDDEVPDPLRVSSRDKLTEMAASSQGNIEGNFESLDLTEFAKKQPWWRKLFGQESGP
SAEKYSMATQLFIGGVTGWCMGFIFQKVGKLAATAVGGGFSLLQLANHTGYIKVDWQRVE
KDMKKAKEQLKIRKSNQIPTEVRSKAEEVVSFVKKNVLVTGGFFGGFLLGMAS

>gi568815593r:73452800_73662881|GENSCAN_predicted_CDS_3|1242_bp
atggagcagactgccagggtctgtgtttcagctttgccacttactagcactgtggcctta
ggaaacgtgaataggccctttcttcggagggcacagaacttcaggatcagggcccaatgg
agactgagcggacttaaccctaactgtgcacaggaccgcgctctccgacccctttgtggc
ctctcccagaggtacgggctgcgccccaagccagcagtctctcgtagggcctacagccgg
cagccgctggagcaggaggaggagaatagggactcgctggaccatcacaaacgctgtcgc
gcgtgcgcagggaggaaccgagttcgcggcgaaatgaaagaaacaatcatgaaccaggaa
aaactcgccaaactgcaggcacaagtgcgcattggtgggaaaggaactgctcgcagaaag
aagaaggtggttcatagaacagccacagcagatgacaaaaaacttcagttctccttaaag
aagttaggggtgaatatgtttacaaaccaaggaacagtgatccactttaacaaccctaaa
gttcaggcatctctggcagcgaacactttcaccattacaggccatgctgagacaaagcag
ctgacagaaatgctacccagcatcttaaaccagcttggtgcggatagtctgactagttta
aggagactggccgaagctctgcccaaacaatctgtggatggaaaagcaccacttgctact
ggagaggatgatgatgatgaagttccagatcctctacgtgtgtcctcgcgagacaagctc
accgaaatggccgcgtccagtcaaggaaacattgagggaaattttgagtcactggacctt
acggaatttgctaagaagcagccatggtggcgtaagctgttcgggcaggaatctggacct
tcagcagaaaagtatagcatggcaacccagctgttcattggaggtgtcactggatggtgc
atgggtttcatattccagaaggttggaaagttggctgcaacagctgtgggaggtggattt
tctctccttcagcttgcaaaccatactgggtatatcaaagttgactggcaacgagtggag
aaggacatgaagaaagccaaagagcagctgaagatccgtaagagcaatcagatacctact
gaggtcaggagcaaagctgaggaggtggtgtcatttgtgaagaagaatgttctagtgact
gggggatttttcggaggctttctgcttggcatggcatcctaa

>gi568815593r:73452800_73662881|GENSCAN_predicted_peptide_4|334_aa
MDTSTNLDIGAQLIVEECPSTYSLTGMPDIKIEHPLDPNSEEGSAQGVAMGMKFILPNRF
DMNVCSRFVKSLNEEDSKNIQDQIIHEAFYDTLSALSVHQLAAQGEMLYLATRIEQENVI
NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLL
DCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRS
DQHYILTGARPYCKLHNWLVPYENLMPDDLRWNSFIPKPSSSSSSSLLPPSPLLSVEKLS
STKPVPGVKKTLGPRCSEQAARVVVIGPCAEDLK

>gi568815593r:73452800_73662881|GENSCAN_predicted_CDS_4|1005_bp
atggatacatcaacaaatctggatattggagcccagcttatcgtggaagagtgtcccagc
acttatagcctaactggcatgccagacattaaaatagaacatccactggacccaaattca
gaagaagggtcagctcagggtgttgccatgggaatgaaattcatattgcctaaccgattt
gatatgaatgtgtgttctcgatttgtgaagtccttaaatgaagaagatagtaaaaatatt
caagatcagataattcatgaagcattttatgatactctttcagctttgtctgttcaccag
ttggctgctcagggagagatgctctatctggctactcgtatcgaacaagaaaatgttatc
aatcacacggatgaagaaggatttactcctctgatgtgggctgcagcacacgggcaaata
gctgtggtagagttcctacttcagaatggtgctgatccccaacttttaggaaaaggtcga
gaaagtgcactgtcgttggcctgtagtaaaggctacacagatattgtcaaaatgctgctt
gattgtggagttgatgtaaatgaatatgattggaatggaggaacacctctgctttatgct
gtacatggaaatcatgtgaaatgtgtaaagatgctcttagaaagtggggctgatccaaca
attgaaactgactctggatataattctatggatctagctgtagccctaggctatagaagt
gatcagcattacatcctcacaggagcacgaccctactgtaaactgcacaactggcttgtt
ccttatgagaatctaatgcctgatgatctgaggtggaacagtttcatcccaaaaccatca
tcatcctcctcctcgtccctcctcccaccctcacccctcctgtccgtggaaaaattatct
tccacgaaaccagtccctggtgtcaaaaagaccttgggtccacgatgctccgagcaagca
gcaagggtggtggttattggcccgtgtgctgaagatctcaaatga

>gi568815593r:73452800_73662881|GENSCAN_predicted_peptide_5|699_aa
MLVPVDANNRSPSFLPDPGIILQGEEGAMKINDASQATGVPASRDRSPLSPAGGETLAGK
KVRSVATGQLCPKSPRKKLSLIRGERIPGTGAGGRPGESARSRDHRRQQTASRAFPSEAS
FSTGLQARACFGRDVTSDFFFRLLAKKRSAAMQLKLSGYIGEWPNSLTGSSSPQLSFDLG
SSLRLHPFLSTVVSSRSNQQLSKAMDTFPSLPLLTRLPQTPVQIKEFGAVSKVDFSPQPP
YNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISG
RAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGC
ASKLNPDLFITGSYDHTVKMFDARTSESVLSVEHGQPVESVLLFPSGGLLVSAGGRYVKV
WDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRKVKVYSTTSYKVVHSFDYAASILSLALAH
EDETIVVGMTNGILSVKHRKSEAKKESLPRRRRPAYRTFIKGKNYMKQRDDILINRPAKK
HLELYDRDLKHFRISKALDRVLDPTCTIKTPEITVSIIKELNRRGVLANALAGRDEKEIS
HVLNFLIRNLSQPRFAPVLINAAEIIIDIYLPVIGQSPVVDKKFLLLQGLVEKEIDYQRE
LLETLGMMDMLFATMRRKEGTSVLEHTSDGFPENKKIES

>gi568815593r:73452800_73662881|GENSCAN_predicted_CDS_5|2100_bp
atgctagttcctgtggatgctaataacaggagcccctcgtttcttcctgatcctggaatt
attctacaaggagaggaaggtgctatgaaaataaatgatgcctcacaggcgacaggtgtc
ccagcgtcccgagacaggagcccgctgtctcccgctggaggggagactcttgcaggaaag
aaagtccgttctgtcgccaccggccagctgtgcccgaaaagtcccaggaagaaactctcg
ctcatccgcggcgagcggatcccgggcacaggggctggaggccgacccggtgagagtgca
aggtctcgcgaccaccgacgacagcagacagcgagtcgggccttcccatctgaggccagc
ttcagtacaggcctccaagcccgggcttgttttggccgcgacgtcacttccgatttcttc
tttcgccttctggctaaaaaacgttccgcagcaatgcagctgaaactttcgggctatata
ggagagtggccaaattctttaaccggctcaagttcccctcaattaagcttcgacctaggt
tcttctctgcgattacaccctttcctgtccaccgttgttagttcccggagtaatcagcaa
ctctccaaggcaatggacacatttccatctttgcctttgcttacgaggctccctcagacc
cctgttcagattaaggaatttggtgcagtttcaaaagtagacttttctcctcagcctcca
tataattatgctgtcacagcttcctcaagaattcacatttatggccgatactcccaagaa
cctataaaaaccttttctcgatttaaagacacagcatactgtgctacttttcgacaagat
ggtagattgcttgtggctggcagtgaagatggtggagttcaactttttgatataagtggg
agggctcccctcaggcagtttgaaggccatacaaaagcagttcatacagtagattttaca
gctgacaaatatcacgtggtctctggggctgatgattatacagttaaattatgggatatt
ccaaactccaaagaaattttgacatttaaagaacactctgattatgtgaggtgtggatgt
gctagcaaacttaatccggatctctttataacaggatcatatgatcatactgtgaagatg
tttgatgcacgaacgagtgagagtgttctctccgttgagcatgggcagccagtggagagt
gtcctacttttcccctctggaggtcttctggtgtcagcaggaggtcgttatgttaaagtc
tgggacatgttaaaaggaggacaattgctagtatctttgaaaaatcatcacaaaaccgtg
acatgtttatgtctaagcagctctggacagaggaaggtgaaagtatacagcacaacttcc
tacaaagtagtccacagttttgattatgcagcttcaattttgagtcttgcccttgcacat
gaagatgagacaatagttgtaggaatgaccaatggaatactgagtgttaaacatcggaaa
tctgaagcaaagaaggaatcacttcccagaagaagaaggcctgcatatcgaacctttatt
aaaggaaaaaattacatgaagcaacgggatgacattttgattaacaggccagcaaagaag
cacctagaattgtatgacagggatctgaaacattttcggatctctaaggcactcgataga
gttcttgatcccacttgtacaataaagacacccgagattacggtgtccatcataaaggag
ttaaatcgaagaggagtccttgcaaatgcgcttgcaggtcgggatgagaaggaaatcagt
catgttcttaattttttgataaggaatctttctcagccaagatttgcccctgttttaatc
aatgctgctgaaataattattgatatatatctgcctgtaattggtcagtcccctgtagtt
gataaaaagtttttactacttcaaggacttgtagaaaaagagattgattaccaaagagaa
ttgttagaaaccttggggatgatggatatgctttttgccaccatgagaaggaaggaaggc
acttctgtgttggaacacacatctgatggatttccagagaataagaagatagaatcatag

>gi568815593r:73452800_73662881|GENSCAN_predicted_peptide_6|178_aa
MRKIQKRKPLIKPSDLMRLIHYRENSMGETAPMIQIISHQVPLTTHGNYGSTIQDEIWVG
TRRNHIIVLSICPASLESLLSYKVHFFHGASLASPAFIGLSPSNFQALTYRTIWQEAVPP
SAGHYWLSVWVCLSDSSDVQEGWFPLYPKPFETGLCNRTFSDDGNILDLCCPMGTCGY

>gi568815593r:73452800_73662881|GENSCAN_predicted_CDS_6|537_bp
atgaggaagatacaaaagcggaaacccctgataaaaccatcagatctcatgagacttatt
cactaccgtgagaacagtatgggggaaactgcccccatgattcaaattatctcccaccag
gtccctctcacaacacatgggaattatggaagtacaattcaagatgagatttgggtgggg
actcggcgaaaccatattattgtccttagtatctgccctgcttcattagaatccttactg
tcctacaaagtccacttcttccatggagcatctttggcttctccagccttcattggcctc
tctccttccaacttccaggccttaacataccgcacaatttggcaggaagccgtaccaccg
agcgctggtcactattggctctccgtgtgggtctgcctttctgactcttctgatgttcag
gaagggtggttccctctctacccaaagccctttgaaacaggactgtgcaacagaactttc
tctgatgatggaaatattcttgatctgtgctgtccaatgggaacatgtggctattga

>gi568815593r:73452800_73662881|GENSCAN_predicted_peptide_7|235_aa
MESGNTKEHAAKKQSYTTPLLHEGFFRRRGLGQPYGPHKESGLACLKSLWTKSRKITPSH
LNLMTVWSAVYFPVSRRTLAGLSPAQPPALSAPERPRAPQLPPPHEAAPPSPLVAAPEGA
GGGAQPSRRSACSGSPVTSADPRIPGDPGESGPADANSGGQTFPPRAAGKRRRWSPKEHL
PGAMAPQPPEPRRGSAPAPCLRAPRNAPPASRRPESGRLSPAMPTPGGGRAEAKV

>gi568815593r:73452800_73662881|GENSCAN_predicted_CDS_7|708_bp
atggagagcgggaacaccaaggaacatgctgcaaaaaagcagagctataccacccctctt
ctacatgaggggttcttcagaagaagaggactagggcagccatatggcccacacaaggaa
tctggacttgcatgtctgaaatctctttggactaagtccaggaagataactccaagtcat
ttaaacctgatgactgtctggagtgctgtttatttccctgtctcccgaaggacactggcg
gggctttcacccgcccagcccccggctctcagtgcgcccgagcgaccccgcgctccgcag
ctgccgccgccgcacgaggctgcgccgccctctccacttgttgccgctcccgagggagcg
ggaggcggcgcccagccctcgcgccgcagcgcctgcagcggttccccggtcacctctgct
gaccctcgcatccctggggaccctggagaaagtggccctgcggatgcgaactcaggtgga
caaacttttccgcccagagctgcagggaaacgcagacgatggagtcccaaagagcattta
cctggagcgatggccccgcagcctccagaacccaggcgaggctctgcccccgcgccctgc
ctgagggcgcctcggaacgcgcccccagccagccgccgcccggagtccggaaggctctcc
ccggcgatgccaacgcctggcggcggccgggctgaagccaaggtttag

>gi568815593r:73452800_73662881|GENSCAN_predicted_peptide_8|70_aa
MEEPKSPHSWTIGFSVMPQGARDTSSIVKGTTSWKERCRQCVVNVYQEDSTEVEVYMWYA
GILNRPPWVE

>gi568815593r:73452800_73662881|GENSCAN_predicted_CDS_8|213_bp
atggaggaacccaaatctcctcattcctggaccattggtttttcagtgatgcctcagggt
gcaagggacacatcttccattgttaagggaactacttcttggaaagaaagatgccgtcag
tgtgtagttaatgtgtatcaggaagatagcacagaggtggaagtgtatatgtggtatgca
gggatactcaatcggccaccctgggtagaatga

>gi568815593r:73452800_73662881|GENSCAN_predicted_peptide_9|148_aa
MASKCSGERKSCMSLTSNQKQEIIELSEKGTSKAKIAESRPLVPNSQAAYTLIQNTDSKM
GTQKAVSIQSLGQAGLLAKLQEIYSPLPEQQEGQYVCSRVKWRVIEDEDTEENEGSIMQG
LVGPPKDVDFSSEYAEDPFEGSELSDII

>gi568815593r:73452800_73662881|GENSCAN_predicted_CDS_9|447_bp
atggcctctaagtgttcaggtgaaaggaagagttgcatgtctctcacttcaaatcaaaag
caagaaattattgagcttagtgagaaaggcacatcaaaagccaagatagctgaaagcagg
cctcttgtgccaaacagtcaagcagcctataccttgattcagaacactgactcaaagatg
ggaacacagaaggcagtcagtatacagagtttggggcaagcaggcctattagccaagtta
caagaaatatacagtcccctgcctgagcagcaagaaggccagtatgtctgcagcagagtg
aagtggagagtaatagaagatgaagacacagaggaaaatgaaggatctattatgcaaggc
cttgtaggtcctcctaaggacgttgacttttcttctgagtatgcagaggatccatttgag
ggttctgagctgagtgacataatctga