GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:39:02

Sequence gi568815595r:127981253_128223724 : 242472 bp : 44.83% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   2845   3026  182  2  2   99   45   218 0.997  16.37
 1.02 PlyA +   4037   4042    6                               1.05

 2.12 PlyA -   5239   5234    6                              -0.45
 2.11 Term -   7143   6956  188  1  2   59   53    74 0.798  -1.35
 2.10 Intr -   7685   7605   81  0  0   79  100    44 0.922   4.31
 2.09 Intr -   8774   8682   93  0  0   44  111    60 0.902   3.84
 2.08 Intr -  10601  10431  171  0  0   87   58    66 0.897   3.41
 2.07 Intr -  11737  11661   77  0  2   38  105    67 0.963   2.56
 2.06 Intr -  13528  13331  198  0  0   81  105    15 0.475   0.97
 2.05 Intr -  16962  16861  102  2  0  126   32    81 0.707   5.59
 2.04 Intr -  23277  23204   74  0  2   35   96    55 0.216  -0.80
 2.03 Intr -  41776  41660  117  1  0   87   62    49 0.256   2.86
 2.02 Intr -  52550  52374  177  2  0   79   42   123 0.217   6.92
 2.01 Init -  54718  54689   30  1  0   62   80    34 0.478  -0.21
 2.00 Prom -  64274  64235   40                              -2.66

 3.00 Prom +  67823  67862   40                              -4.06
 3.01 Init +  70091  70094    4  1  1   62   72     0 0.216  -4.04
 3.02 Intr +  70454  70658  205  0  1   95  111    78 0.351   9.06
 3.03 Intr +  71509  71650  142  1  1   83  115    46 0.397   7.16
 3.04 Intr +  74264  74329   66  1  0   98  115    23 0.938   5.10
 3.05 Intr +  74421  74499   79  2  1   99   75     2 0.965  -0.88
 3.06 Intr +  75457  75588  132  2  0   79   47   105 0.955   6.12
 3.07 Intr +  78850  78959  110  2  2   58   91   113 0.984   8.60
 3.08 Intr +  79256  79409  154  1  1   57   94   121 0.989   9.25
 3.09 Intr +  83625  83785  161  1  2   99   89   249 0.999  25.81
 3.10 Intr +  85702  85899  198  0  0   60  123   345 0.995  34.75
 3.11 Intr +  86169  86406  238  2  1   95   35    87 0.388   1.29
 3.12 Intr +  86693  86807  115  0  1   83  117   157 0.714  17.61
 3.13 Term +  88224  88410  187  0  1   97   52   257 0.902  19.96
 3.14 PlyA +  90407  90412    6                               1.05

 4.18 PlyA -  90469  90464    6                               1.05
 4.17 Term -  95937  95672  266  1  2   71   38   197 0.680   8.67
 4.16 Intr -  97877  97780   98  1  2   49   94    70 0.375   3.35
 4.15 Intr - 100157 100002  156  1  0  115   44   264 0.446  23.83
 4.14 Intr - 101322 101231   92  0  2   67   83   124 0.996   8.59
 4.13 Intr - 106556 106454  103  1  1   63   99   123 0.856  11.08
 4.12 Intr - 116246 116048  199  0  1   90   91   368 0.998  35.71
 4.11 Intr - 117693 117630   64  0  1   80   91    60 0.942   3.79
 4.10 Intr - 119492 119343  150  2  0   96   84   112 0.993  11.96
 4.09 Intr - 120396 120307   90  0  0   91   90    71 0.995   7.79
 4.08 Intr - 123672 123521  152  1  2   97   87    97 0.718  10.38
 4.07 Intr - 131768 131636  133  2  1   93  111   105 0.990  13.52
 4.06 Intr - 133501 133304  198  1  0   97   42    65 0.763   2.35
 4.05 Intr - 142489 142158  332  2  2   52   68   272 0.252  16.95
 4.04 Intr - 142782 142639  144  1  0   35   52   115 0.238   2.85
 4.03 Intr - 151594 151384  211  1  1   85   61    34 0.019  -1.11
 4.02 Intr - 163756 163626  131  2  2   74   64    53 0.322   1.91
 4.01 Init - 168876 168723  154  0  1   49   59    99 0.389   3.25
 4.00 Prom - 169330 169291   40                              -6.66

 5.00 Prom + 170026 170065   40                              -4.16
 5.01 Init + 172256 172571  316  1  1   92   89   616 0.157  59.60
 5.02 Intr + 189450 189521   72  1  0  138   65    -3 0.103   1.78
 5.03 Intr + 211015 211066   52  2  1  103   69    26 0.149   0.17
 5.04 Term + 214184 214409  226  2  1   62   33   156 0.474   3.75
 5.05 PlyA + 214884 214889    6                               1.05

 6.03 PlyA - 215092 215087    6                               1.05
 6.02 Term - 217457 217206  252  2  0   95   49   107 0.697   3.14
 6.01 Intr - 233656 233606   51  1  0  122   87    24 0.196   4.80

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 172256 172744  489  1  0   92   53   643 0.834  57.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:127981253_128223724|GENSCAN_predicted_peptide_1|60_aa
XRHEVISKEILELDPWENQWNVVAINVLMHDSYDVCLVARMNPRDLIPPPSDLVEEGNEH

>gi568815595r:127981253_128223724|GENSCAN_predicted_CDS_1|183_bp
natcgccatgaggttatctccaaagaaatattggaactggacccatgggaaaaccagtgg
aatgttgtagccatcaacgtcctcatgcatgacagctatgatgtctgcctagtagccagg
atgaatccccgagacctcatccccccgccttcagatttggtggaagaaggcaatgagcac
taa

>gi568815595r:127981253_128223724|GENSCAN_predicted_peptide_2|435_aa
MPPGKGFLRWEFSSGGQNQITNMNSGTISEPIQGLNKLAIKSCITGLKIEDQVENQRKRK
DIRKLMTFKCWDYRHEHLAPVSDLTCKDFKAAIVNMVKELKDTMKQRKDPLSPHNNTRRQ
LYVTDEEVEAQRGSSVAGEQKLTCTDVSVASITSIDSVECKHSKPMGELVSLGLPKTVLV
GSTVSWSMSSFSLVYYLILLEHILKEPLKNAWMVDVAVLKHGCTFIASSVIERAFTSSGS
SEISHKEPPVGYCTLVVRVGLVPSATDTAQPTTAQLQSLNASFSAWSVALGILHPAPHIL
PITSYVLHHPQDILGLSPSASKWLEATEHNGSLPGLSLVLLSTHRKRRWLQFQGAGRLAK
QKIAHLFLNITFKANTDILYPRLHPTHTVVLIPLLRFAQAPPNLAPNMRLAGLPGCSTLL
SGSGLWMMFLEDFLA

>gi568815595r:127981253_128223724|GENSCAN_predicted_CDS_2|1308_bp
atgcccccgggcaaaggctttttgcgctgggagttcagctcaggtgggcaaaaccagata
actaacatgaacagtggaacaatcagtgaaccaatacaagggttaaataagctagcaatt
aaaagctgtatcactggtctaaagatagaagatcaagtagaaaatcagcgcaagaggaaa
gatatacgaaaactaatgaccttcaagtgctgggattacaggcatgagcacctggcccca
gtgtcagatttaacttgcaaagatttcaaagcagccattgtaaatatggtcaaagaacta
aaggacaccatgaagcaaaggaaggaccctttgagtcctcacaacaacactagaaggcag
ctctatgtcacagatgaggaagttgaggcacagagaggatcctcagtggctggtgagcag
aagctgacatgcacggatgtgtcggttgcctctattacgagtattgactcagttgagtgc
aaacacagcaagcccatgggtgagttggtcagcctgggacttcccaagactgtcctagta
ggatccactgtttcctggtccatgtcttccttttccttggtttactaccttattctgctt
gagcacatcctcaaggagcctcttaagaatgcatggatggtagatgtggcagttttgaaa
catggctgcacatttattgcctcttctgtcattgagagggctttcacttcatctggaagt
tctgaaatttcccataaggagcctcctgtgggctactgcacacttgttgtgagagtgggc
ctcgtcccaagtgcaactgacacagctcagcccacgacagcacagttgcagagcctgaac
gccagcttctcagcctggagcgtggccttgggcatcctccaccctgctcctcacatcctg
cctataacatcctacgttttgcaccatcctcaagatatcttgggattaagcccaagtgcc
tccaagtggcttgaagccactgagcacaacgggagcctcccaggattgtctctggtgctc
ctgagcacccacagaaaacggcggtggctgcagttccagggggcaggccgacttgctaag
cagaaaatagcccatctcttcctcaacatcacttttaaagcaaacacagacattctctat
cctcggctgcacccaacccacactgttgttctgatcccactgctcaggttcgcccaggct
ccccccaacttggcccccaacatgcgtcttgctggactgccaggctgctccaccctgctt
agtggctctgggctgtggatgatgttcttagaggacttccttgcctga

>gi568815595r:127981253_128223724|GENSCAN_predicted_peptide_3|596_aa
MESIKARHKGTLPGGLPEFFCEADYFPSCPGPSPAKSLQKLIPFVLRWKGTHTHDKPPGL
LNDSDSEGARRRPWVARKVTSLCPNSSCFVSPIKVKFLEVIKPFCVILPEIQKPERKIQF
KEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSG
LIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGIC
LLITIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGME
FEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATIFVFAVVIYFQGFRVDLPIK
SARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSARFSGNLLVSLLGTWSDTS
SGGPARAYPVGGLCYYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAK
DVSRSKTFWKGDESVTASNSNFSPVGTLQVAKQLKEQQMVMRGHRETSMVHELNRYIPTA
AAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF

>gi568815595r:127981253_128223724|GENSCAN_predicted_CDS_3|1791_bp
atggaatctatcaaggctcggcacaaaggtactctcccaggaggccttcctgaattcttc
tgtgaggcagactacttcccgagctgccccggcccttctccggccaagtctctccagaaa
ctcatcccattcgttctcagatggaaggggacccacacccacgacaagcctccgggtttg
cttaatgactcagacagcgagggtgctcgaaggcgtccctgggtagcgcggaaggttact
tctctgtgtcccaactcttcctgttttgtttctcccatcaaagtcaaatttctggaagtc
atcaagcccttctgtgtcatcctgccggaaattcagaagccagagaggaagattcagttt
aaggagaaagtgctgtggaccgctatcaccctctttatcttcttagtgtgctgccagatt
cccctgtttgggatcatgtcttcagattcagctgaccctttctattggatgagagtgatt
ctagcctctaacagaggcacattgatggagctagggatctctcctattgtcacgtctggc
cttataatgcaactcttggctggcgccaagataattgaagttggtgacaccccaaaagac
cgagctctcttcaacggagcccaaaagttatttggcatgatcattactatcggccagtct
atcgtgtatgtgatgaccgggatgtatggggacccttctgaaatgggtgctggaatttgc
ctgctaatcaccattcagctctttgttgctggcttaattgtcctacttttggatgaactc
ctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaactaacatctgt
gaaaccatcgtatggaaggcattcagccccactactgtcaacactggccgaggaatggaa
tttgaaggtgctatcatcgcacttttccatctgctggccacacgcacagacaaggtccga
gcccttcgggaggcgttctaccgccagaatcttcccaacctcatgaatctcatcgccacc
atctttgtctttgcagtggtcatctatttccagggcttccgagtggacctgccaatcaag
tcggcccgctaccgtggccagtacaacacctatcccatcaagctcttctatacgtccaac
atccccatcatcctgcagtctgccctggtgtccaacctttatgtcatctcccaaatgctc
tcagctcgcttcagtggcaacttgctggtcagcctgctgggcacctggtcggacacgtct
tctgggggcccagcacgtgcttatccagttggtggcctttgctattacctgtcccctcca
gaatcttttggctccgtgttagaagacccggtccatgcagttgtatacatagtgttcatg
ctgggctcctgtgcattcttctccaaaacgtggattgaggtctcaggttcctctgccaaa
gatgtaagtagaagcaaaactttctggaagggtgatgaaagtgtgactgcctccaattcc
aacttctcccctgtgggcaccctgcaggttgcaaagcagctgaaggagcagcagatggtg
atgagaggccaccgagagacctccatggtccatgaactcaaccggtacatccccacagcc
gcggcctttggtgggctgtgcatcggggccctctcggtcctggctgacttcctaggcgcc
attgggtctggaaccgggatcctgctcgcagtcacaatcatctaccagtactttgagatc
ttcgttaaggagcaaagcgaggttggcagcatgggggccctgctcttctga

>gi568815595r:127981253_128223724|GENSCAN_predicted_peptide_4|890_aa
MLIKGEAFELTKMQEKGQAAQNRGKLMKERAAQRKQQAQRQQQPKPCGTWRDRLPPHNDK
VAVSSSTKSPNQVSLALMKSCAPAPREKSSALPSQKGFLSVAITTGNVLVHLKPAWHWVS
PKARGKYCLATTDVYSRPMHSTQQMMNPAKSGFSSFKTLHSLLSQALDQIRGVVPLCSRP
QPRQEAPATGEANPETQTEVGDRSSSSSRDGRSPPGVCKMKIEEVKSTTKTQRIASHSHV
KGLGLDESGLAKQAASGLVGQENAREVWPVDQGVGGCKQGCCGERAAEVGGSGRDARARG
LPPLFPQGSENGPGARGGAPPWSWRFFSFALRRIPVFKVSALSSQVQMPNEAGNGDEGSG
WVHCGVSALSPRCSALLKVTMRLQAKQNQATALALAIAQELGSKVPFCPMVGSEVYSTEI
KKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKG
TKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKG
DVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKY
IDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITS
PHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYS
VQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMKSKMEVALTAD
LTAAGGDRVFFGCPRYQYPDQPGTVINGQAVRAGRPSARVSATDAAVRPARPALTPGQGP
GAINGRRAAGGGWAAAIRWADGRLPIARSVTRRHRHRHAASTQISAVSAA

>gi568815595r:127981253_128223724|GENSCAN_predicted_CDS_4|2673_bp
atgcttattaagggagaggcatttgagctgacaaagatgcaagagaagggccaggctgca
cagaaccgagggaaattgatgaaagaacgtgctgcacagagaaaacagcaggctcagaga
cagcagcaacctaagccatgtggcacgtggcgagacaggctcccccctcacaatgacaaa
gtggctgtcagcagctccacaaagtccccaaaccaagtctccttggccctgatgaagtca
tgtgcccctgcaccaagagagaaatccagtgctctgcctagccagaaagggtttctttct
gtggccatcacaactgggaatgtgctggttcacctgaagccagcatggcactgggtctca
cccaaggctcgtggtaaatactgtctggctaccactgatgtttattcaaggcccatgcac
tctactcagcagatgatgaatcctgccaagtctgggttttcctccttcaagacgctgcat
tctcttttgtcccaggccctagatcaaatccggggcgtggtcccactgtgctcccgaccc
cagcctcggcaggaagcgccggctacgggggaagccaacccggagacacagacggaagtg
ggtgaccggagctctagcagcagccgcgatgggcgcagccctcccggcgtctgcaaaatg
aagattgaggaggtgaagagcactacgaagacgcagcgcatcgcctcccacagccacgtg
aaagggctggggctggacgagagcggcttggccaagcaggcggcctcagggcttgtgggc
caggagaacgcgcgagaggtgtggccagtggaccagggagttgggggctgcaagcagggc
tgctgcggcgagagagctgctgaagtcggtggctcggggcgggatgcgcgcgccaggggt
ctcccgccattatttcctcagggaagtgaaaatgggccaggggctcggggaggggcgccg
ccctggagctggagatttttttcctttgctcttagaagaataccagttttcaaggtgtca
gccttgagctcacaagtgcagatgcctaatgaggcaggcaacggggatgagggaagtggc
tgggtgcactgtggcgtgtctgccttgagccccaggtgctcggccttgctgaaggtcacc
atgagactgcaggccaaacagaaccaggctacagctctggctctggctattgctcaggag
ctgggtagtaaggtccccttctgcccaatggtggggagtgaagtttactcaactgagatc
aagaagacagaggtgctgatggagaacttccgcagggccattgggctgcgaataaaggag
accaaggaagtttatgaaggtgaagtcacagagctaactccgtgtgagacagagaatccc
atgggaggatatggcaaaaccattagccatgtgatcataggactcaaaacagccaaagga
accaaacagttgaaactggaccccagcatttttgaaagtttgcagaaagagcgagtagaa
gctggagatgtgatttacattgaagccaacagtggggccgtgaagaggcagggcaggtgt
gatacctatgccacagaattcgaccttgaagctgaagagtatgtccccttgccaaaaggg
gatgtgcacaaaaagaaagaaatcatccaagatgtgaccttgcatgacttggatgtggct
aatgcgcggccccaggggggacaagatatcctgtccatgatgggccagctaatgaagcca
aagaagacagaaatcacagacaaacttcgaggggagattaataaggtggtgaacaagtac
atcgaccagggcattgctgagctggtcccgggtgtgctgtttgttgatgaggtccacatg
ctggacattgagtgcttcacctacctgcaccgcgccctggagtcttctatcgctcccatc
gtcatctttgcatccaaccgaggcaactgtgtcatcagaggcactgaggacatcacatcc
cctcacggcatccctcttgaccttctggaccgagtgatgataatccggaccatgctgtat
actccacaggaaatgaaacagatcattaaaatccgtgcccagacggaaggaatcaacatc
agtgaggaggcactgaaccacctgggggagattggcaccaagaccacactgaggtactca
gtgcagctgctgaccccggccaacttgcttgctaaaatcaacgggaaggacagcattgag
aaagagcatgtcgaagagatcagtgaacttttctatgatgccaagtcctccgccaaaatc
ctggctgaccagcaggataagtacatgaagagcaagatggaagtggcgctgacagcagat
ctcacagccgcgggtggggacagagtcttcttcggctgcccaaggtaccaatatccagat
cagccaggcacggtgattaatggccaggccgtgcgggctgggcggccatcagcgcgcgtc
tcggcgacggatgcggctgtcaggccggcccggcccgcgctgacccccgggcaggggccc
ggcgcgatcaatgggcggcgcgcagcgggcggcggctgggccgccgcgataagatgggcc
gatgggcgcctgccgattgcccgctccgtcacccgccgtcaccgtcaccgtcacgccgcc
agcacgcagatcagcgccgtcagcgccgcgtga

>gi568815595r:127981253_128223724|GENSCAN_predicted_peptide_5|221_aa
MAGRRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFSVPL
PARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGESNRISFPGKDFLDK
KRYYLVIFVGCHVNLTRLGVRSLLVLRKPGLCLQLSTVFGDQQIKGHSKAKLGATVVYQM
HFIWRNVWDLTDTGESRLCEPLLSLVSSLHNGDEGASHSQV

>gi568815595r:127981253_128223724|GENSCAN_predicted_CDS_5|666_bp
atggcagggcggcgggtgaacgtgaacgtgggcgtgctgggccacatcgacagcggcaag
acggcgctggcgcgggcgctaagcaccacagcctccaccgccgcctttgacaagcagccg
cagagccgcgagcgcggcatcacgctcgatctgggcttctcgtgcttctcggtgccgctg
cccgcgcgcctgcggtcgtctttgcccgagttccaggcagcgcccgaggccgagcccgag
cccggcgagccactgcttcaggtcacgctggtcgactgccccgggcacgcctccctcatc
cggaccatcatcggcgaatcaaatagaatctcttttcctggcaaagatttcctagataaa
aagaggtactacttagtcatttttgtaggctgccatgtgaacctgacacggttgggtgtg
agaagcctgctggttctcagaaaaccaggcctgtgtctgcagctgagcacagtatttggt
gatcagcagataaaaggacactccaaagccaaacttggagccactgtcgtctaccagatg
cattttatctggcggaatgtgtgggacctgacagacacaggggaatccaggctctgcgaa
cctctgctgagcctcgtctcctctctccataatggagatgaaggcgcctcccattcacaa
gtgtag

>gi568815595r:127981253_128223724|GENSCAN_predicted_peptide_6|100_aa
ENHSLVSVHPEEHQIAAKGASNTLKDHSFCMQGAFFRKECPQCLCKREDGFLMLPVSQAH
GPVTGFYIQHSLAGLVQEDTENHMCCRKSALSEMEDVVVF

>gi568815595r:127981253_128223724|GENSCAN_predicted_CDS_6|303_bp
gaaaatcattcactggtatcagtgcacccagaggaacaccagatcgcagctaaaggtgcc
agcaacactcttaaagaccattctttttgtatgcaaggagccttcttcagaaaggaatgt
ccccagtgtctctgcaaaagagaggatggtttcctaatgctccctgtcagccaagctcat
ggccctgtcactggtttttacatccagcattctctggctggccttgtgcaagaagacact
gagaaccacatgtgctgccggaagagtgccctttctgaaatggaagatgttgttgtgttc
tga