GENSCAN 1.0	Date run:  8-Nov-116	Time: 06:45:08

Sequence gi568815594r:15879395_16175906 : 296512 bp : 43.15% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   1066   1105   40                              -1.36
 1.01 Init +   4521   4602   82  2  1   58   65    88 0.273   4.63
 1.02 Intr +  13143  13220   78  1  0   40  116    57 0.328   3.22
 1.03 Term +  16225  16364  140  2  2   23   44    91 0.235  -3.67
 1.04 PlyA +  16703  16708    6                               1.05

 2.03 PlyA -  16829  16824    6                               1.05
 2.02 Term -  21888  21689  200  1  2   30   55   195 0.752   7.96
 2.01 Init -  22385  22274  112  2  1   42  116    44 0.881   2.98
 2.00 Prom -  23945  23906   40                              -0.16

 3.00 Prom +  24178  24217   40                              -3.16
 3.01 Init +  26698  26770   73  0  1   42   65    98 0.630   2.13
 3.02 Intr +  26809  26873   65  2  2  119   94    20 0.404   4.14
 3.03 Term +  33710  33781   72  1  0   61   45    76 0.127  -1.49
 3.04 PlyA +  34266  34271    6                               1.05

 4.03 PlyA -  35340  35335    6                               1.05
 4.02 Term -  35780  35632  149  0  2   84   36   122 0.528   4.66
 4.01 Init -  44683  44596   88  1  1   60   89    77 0.647   5.82
 4.00 Prom -  45013  44974   40                              -3.56

 5.02 PlyA -  45558  45553    6                               1.05
 5.01 Sngl -  57238  56534  705  1  0  103   39   535 0.949  44.32
 5.00 Prom -  57944  57905   40                              -9.36

 6.00 Prom +  58136  58175   40                              -2.26
 6.01 Init +  58768  58823   56  0  2   76   90    11 0.398   0.01
 6.02 Intr +  60958  61036   79  1  1  120   78     7 0.460   2.45
 6.03 Term +  67529  67648  120  1  0   47   48   137 0.599   4.07
 6.04 PlyA +  68729  68734    6                               1.05

 7.02 PlyA -  70549  70544    6                               1.05
 7.01 Sngl -  83735  83064  672  2  0   90   48   378 0.988  28.18
 7.00 Prom -  91202  91163   40                              -4.66

 8.00 Prom +  91870  91909   40                              -7.06
 8.01 Init +  92920  92974   55  0  1   22   81    86 0.536   2.75
 8.02 Intr +  93577  93675   99  2  0   79   94    53 0.898   5.08
 8.03 Term +  97339  97556  218  2  2  102   42   105 0.853   4.61
 8.04 PlyA +  98795  98800    6                               1.05

 9.19 PlyA -  99583  99578    6                               1.05
 9.18 Term - 101143 101024  120  1  0   92   42   104 0.636   4.67
 9.17 Intr - 104961 104869   93  0  0   93   91    91 0.998  10.06
 9.16 Intr - 106434 106366   69  0  0  117   84    23 0.947   4.18
 9.15 Intr - 106643 106563   81  2  0  107   83    16 0.876   2.83
 9.14 Intr - 112997 112854  144  2  0  104   80    24 0.252   3.68
 9.13 Intr - 121225 121102  124  0  1   68   66    83 0.065   4.69
 9.12 Intr - 127296 127144  153  2  0  108   59   148 0.622  13.09
 9.11 Intr - 129714 129555  160  1  1   72  105    84 0.966   7.55
 9.10 Intr - 131915 131847   69  0  0   65  100    21 0.494   0.15
 9.09 Intr - 133944 133881   64  0  1   64   94    36 0.769   0.09
 9.08 Intr - 136846 136772   75  1  0   64   85    74 0.949   4.41
 9.07 Intr - 139146 138929  218  1  2   48   99   152 0.911  10.52
 9.06 Intr - 144021 143932   90  1  0   85  115    57 0.984   8.07
 9.05 Intr - 144964 144901   64  1  1   37   79    59 0.866  -1.81
 9.04 Intr - 145918 145798  121  0  1  106   83    76 0.830   9.40
 9.03 Intr - 161754 161617  138  2  0   65   38    78 0.059   0.08
 9.02 Intr - 169690 169462  229  2  1   90  103    58 0.033   4.43
 9.01 Init - 196512 196293  220  0  1   67  115   155 0.963  12.92
 9.00 Prom - 200124 200085   40                              -5.96

10.00 Prom + 202013 202052   40                              -4.46
10.01 Init + 202832 203051  220  1  1   60   86    71 0.341   2.89
10.02 Term + 203791 204017  227  2  2   66   42   125 0.255   2.64
10.03 PlyA + 204942 204947    6                              -0.45

11.00 Prom + 207817 207856   40                              -4.86
11.01 Init + 210612 210621   10  2  1  113  119     8 0.918   6.78
11.02 Intr + 233763 233842   80  1  2   61   94    36 0.056   0.77
11.03 Intr + 236764 236884  121  0  1   96  121    39 0.963   8.07
11.04 Term + 241380 241573  194  1  2   36   47   111 0.364  -0.62
11.05 PlyA + 245566 245571    6                               1.05

12.07 PlyA - 245974 245969    6                               1.05
12.06 Term - 255166 254973  194  2  2  106   32   122 0.934   5.98
12.05 Intr - 256586 256477  110  1  2   31   74    75 0.491   0.33
12.04 Intr - 257578 257537   42  0  0   84   98    27 0.268   0.66
12.03 Intr - 280772 280740   33  1  0  156   50    21 0.019   2.44
12.02 Intr - 284143 283945  199  2  1   76   25    83 0.131  -0.79
12.01 Intr - 287399 287239  161  1  2   97  100   140 0.988  15.73

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:15879395_16175906|GENSCAN_predicted_peptide_1|99_aa
MKALSTQAPSTGQNHFMVQDFLPEENAGRHILLVDVMSGGVAATLRRCGDKHEDNSPPLH
PSNYCEHHKRREQVFSISTLSRCRGQSLDLTDVQSLLVE

>gi568815594r:15879395_16175906|GENSCAN_predicted_CDS_1|300_bp
atgaaagcactcagcacgcaggctccatcaactggccagaaccacttcatggtccaggat
ttcttaccagaagagaatgctggcagacacatactgctagtggatgtgatgtctggaggt
gtagcagccaccttgagacgatgtggtgataagcatgaagacaactcacccccactacat
ccatctaattactgtgagcaccacaagaggagggagcaggtcttctccatttccacactc
tcccggtgccggggccagagcctggacttaacagatgtccaatccctgcttgttgagtga

>gi568815594r:15879395_16175906|GENSCAN_predicted_peptide_2|103_aa
MKLEAEYCSVPNKGVHVLIPGTYIYVIFHDQRKFPYQAWATGQNPVSKKRRRSRSRREEE
VEVEVEMEEEALAAAEEGEGEGEEEEEKKEEKKEEAADTAWQD

>gi568815594r:15879395_16175906|GENSCAN_predicted_CDS_2|312_bp
atgaagctggaggcagaatactgttcagtccccaacaagggtgtccatgttctaattcct
ggaacctacatatatgttatcttccacgaccaaagaaaatttccatatcaagcctgggcg
acaggacaaaaccctgtctctaaaaaaagaagaagaagcagaagcagaagagaagaagaa
gtggaagtggaagtggaaatggaagaggaagcattagcagcagcagaagaaggagaagga
gaaggagaggaagaagaagagaagaaggaggagaagaaggaagaagcagcagacactgca
tggcaggattga

>gi568815594r:15879395_16175906|GENSCAN_predicted_peptide_3|69_aa
MGRHQAAGGPGRGWPLAWGATALLGVIRQACEHPAAGCQVGDSLCQRVREGMRLAHVHRI
HEVIGWNVN

>gi568815594r:15879395_16175906|GENSCAN_predicted_CDS_3|210_bp
atggggcgacatcaggcggcgggcgggcccgggcggggctggcctctggcctggggcgcc
actgctctgctgggtgtgattaggcaagcttgcgagcacccagctgctggctgccaagtg
ggtgactcactctgccagagggttagagaagggatgcggctggcccacgttcacaggatt
catgaggtcattggctggaatgtgaactaa

>gi568815594r:15879395_16175906|GENSCAN_predicted_peptide_4|78_aa
MAKPIQKEEGSAEAVGGGQPSRSEKDEKGEKEPALSCILNNIPLMSGLYFPEDVERLRML
YGTLHSKMRYQFLSLHCG

>gi568815594r:15879395_16175906|GENSCAN_predicted_CDS_4|237_bp
atggccaaacccatccagaaggaagaaggctcagctgaggcagtaggtggaggtcagcct
tccaggtcggagaaggacgagaaaggtgagaaagaaccagcactgagctgcatcctcaac
aacatcccgttaatgagtggtctatattttcctgaagatgtggagagactgagaatgcta
tatggcacactgcacagcaaaatgcgttaccagttcctgtcccttcactgtggatag

>gi568815594r:15879395_16175906|GENSCAN_predicted_peptide_5|234_aa
MKICSLTLLSFLLLAAQVLLVEGKKKVKNGLHSKVVSEQKDTLGNTQIKQKSRPGNKGKF
VTKDQANCRWAATEQEEGISLKVECTQLDHEFSCVFAGNPTSCLKLKDERVYWKQVARNL
RSQKDICRYSKTAVKTRVCRKDFPESSLKLVSSTLFGNTKPRKEKTEMSPREHIKGKETT
PSSLAVTQTMATKAPECVEDPDMANQRKTALEFCGETWSSLCTFFLSIVQDTSC

>gi568815594r:15879395_16175906|GENSCAN_predicted_CDS_5|705_bp
atgaagatctgtagcctcaccctgctctccttcctcctactggctgctcaggtgctcctg
gtggaggggaaaaaaaaagtgaagaatggacttcacagcaaagtggtctcagaacaaaag
gacactctgggcaacacccagattaagcagaaaagcaggcccgggaacaaaggcaagttt
gtcaccaaagaccaagccaactgcagatgggctgctactgagcaggaggagggcatctct
ctcaaggttgagtgcactcaattggaccatgaattttcctgtgtctttgctggcaatcca
acctcatgcctaaagctcaaggatgagagagtctattggaaacaagttgcccggaatctg
cgctcacagaaagacatctgtagatattccaagacagctgtgaaaaccagagtgtgcaga
aaggattttccagaatccagtcttaagctagtcagctccactctatttgggaacacaaag
cccaggaaggagaaaacagagatgtcccccagggagcacatcaaaggcaaagagaccacc
ccctctagcctagcagtgacccagaccatggccaccaaagctcccgagtgtgtggaggac
ccagatatggcaaaccagaggaagactgccctggagttctgtggagagacttggagctct
ctctgcacattcttcctcagcatagtgcaggacacgtcatgctaa

>gi568815594r:15879395_16175906|GENSCAN_predicted_peptide_6|84_aa
MECRPKELQALGGVRSGSRLSSTASEQAVGQSPPWLILPFQPHFQHNDIYQVTENEQSYN
PIEIEYAQGPSIGSILSKMPSVAV

>gi568815594r:15879395_16175906|GENSCAN_predicted_CDS_6|255_bp
atggaatgcaggcccaaggaactccaggcccttggtggagtgagaagtggcagcagactc
agcagcacagcatcagagcaggctgtggggcagtcacctccttggctcatcctgcccttc
caacctcatttccagcacaatgacatctaccaggtgactgagaatgaacaaagctacaac
cctatagagatagaatatgcccaaggacccagtattggctccatcctgtctaagatgccc
tcagtagctgtgtga

>gi568815594r:15879395_16175906|GENSCAN_predicted_peptide_7|223_aa
MKFVPCLLLVTLSCLGTLGQAPRQKQGSTGEEFHFQTGGRDSCTMRPSSLGQGAGEVWLR
VDCRNTDQTYWCEYRGQPSMCQAFAADPKPYWNQALQELRRLHHACQGAPVLRPSVCREA
GPQAHMQQVTSSLKGSPEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTR
PTAKPTQPGPRPGGNEEAKKKAWEHCWKPFQALCAFLISFFRG

>gi568815594r:15879395_16175906|GENSCAN_predicted_CDS_7|672_bp
atgaagttcgtcccctgcctcctgctggtgaccttgtcctgcctggggactttgggtcag
gccccgaggcaaaagcaaggaagcactggggaggaattccatttccagactggagggaga
gattcctgcactatgcgtcccagcagcttggggcaaggtgctggagaagtctggcttcgt
gtcgactgccgcaacacagaccagacctactggtgtgagtacagggggcagcccagcatg
tgccaggctttcgctgctgaccccaaaccttactggaatcaagccctgcaggagctgagg
cgccttcaccatgcgtgccagggggccccggtgcttaggccatccgtgtgcagggaggct
ggaccccaggcccatatgcagcaggtgacttccagcctcaagggcagcccagagcccaac
cagcagcctgaggctgggacgccatctctgaggcccaaggccacagtgaaactcacagaa
gcaacacagctgggaaaggactcgatggaagagctgggaaaagccaaacccaccacccga
cccacagccaaacctacccagcctggacccaggcccggagggaatgaggaagcaaagaag
aaggcctgggaacattgttggaaacccttccaggccctgtgcgcctttctcatcagcttc
ttccgagggtga

>gi568815594r:15879395_16175906|GENSCAN_predicted_peptide_8|123_aa
MFFTVLKATKSKNLVLASEKGRSWPPKNLKHHTREGAPSTLYKTYAARTYTGGLIGCSTF
FQAYQCICFSGSRGVVPSRFPFRNDLPPAGGSMVSREPPAVRAYHSDSRAYSSMAVLLQP
WEQ

>gi568815594r:15879395_16175906|GENSCAN_predicted_CDS_8|372_bp
atgtttttcacagttctgaaggccacgaagtccaagaacctggtgctggcatctgaaaaa
ggaaggtcctggcccccgaagaacctgaaacatcacacaagggaaggggctccaagcacc
ctctacaagacctatgcagccagaacctacacaggaggacttattggatgcagcacattc
ttccaggcctaccagtgcatctgcttctcagggagccgtggagttgtgccttctagattc
ccttttaggaatgacttgcctccagctgggggcagcatggtcagcagagagcctccagct
gtcagagcctaccactctgacagcagagcctacagctctatggcagtgctgctccagccc
tgggagcagtga

>gi568815594r:15879395_16175906|GENSCAN_predicted_peptide_9|743_aa
MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH
IFLYVVQPRDFPEGAAAQEPGPWPIALSGSPSPAAPSSGWLHCNGQDIRLQEIPGASLHP
VQPEYSLPLKELEMIIFPVTGWAVPHATSSANVNTTKKAINILCFDLMDTLNMSWGFPQP
MLGDPLVQTREDLPLSIGIFYGFVANHQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKY
ILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNIIPVLDEIKSMATAIKETKEALENMN
STLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQ
LPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPDRVQRQTTTVVAASHVYTDLLSHSGT
MTRFVSGKQGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYIHRNLPTLEEYD
SYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGGVFLMVGVGLSF
LFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRHTGSISSELESLKVNLNIFLLGAAG
RKNLQDFAACGIDRMNYDSYLAQERVTRILASLDFAQNFITNNTSSVIIEETKKYGRTII
GYFEHYLQWIEFSISEKVASCKPVATALDTAVDVFLCSYIIDPLNLFWFGIGKATVFLLP
ALIFAVKLAKYYRRMDSEDVYDE

>gi568815594r:15879395_16175906|GENSCAN_predicted_CDS_9|2232_bp
atggccctcgtactcggctccctgttgctgctggggctgtgcgggaactccttttcagga
gggcagccttcatccacagatgctcctaaggcttggaattatgaattgcctgcaacaaat
tatgagacccaagactcccataaagctggacccattggcattctctttgaactagtgcat
atctttctctatgtggtacagccgcgtgatttcccagaaggggcggcagcacaggaaccc
ggcccatggcccatcgcactgtcggggagccccagcccagccgccccatcatcagggtgg
ctgcactgcaatggtcaggatatcaggctccaggagatccctggagcgtcccttcaccct
gtgcaacctgagtactcgcttcctctaaaggaactggaaatgataatcttcccagttacg
ggctgggctgtaccacatgctacatccagtgcaaatgtcaacacaacaaaaaaagcaatt
aacatcttgtgttttgacctcatggacaccctgaacatgtcttggggattcccacagccc
atgcttggagacccgctggttcagacccgtgaggatctacctttgagcattggcatcttc
tatggttttgtggcaaatcaccaggtaagaacccggatcaaaaggagtcggaaactggca
gatagcaatttcaaggacttgcgaactctcttgaatgaaactccagagcaaatcaaatat
atattggcccagtacaacactaccaaggacaaggcgttcacagatctgaacagtatcaat
tcagtgctaggaggcggaattcttgaccgactgagacccaacatcatccctgttcttgat
gagattaagtccatggcaacagcgatcaaggagaccaaagaggcgttggagaacatgaac
agcaccttgaagagcttgcaccaacaaagtacacagcttagcagcagtctgaccagcgtg
aaaactagcctgcggtcatctctcaatgaccctctgtgcttggtgcatccatcaagtgaa
acctgcaacagcatcagattgtctctaagccagctgaatagcaaccctgaactgaggcag
cttccacccgtggatgcagaacttgacaacgttaataacgttcttaggacagatttggat
ggcctggtccaacagggctatcaatcccttaatgatatacctgacagagtacaacgccaa
accacgactgtcgtagcagccagccatgtgtacacagacttgttgtcacactctggcacc
atgaccaggtttgtgtcagggaaacaaggtatcaaaagggtcttgaattccattggttca
gatatcgacaatgtaactcagcgtcttcctattcaggatatactctcagcattctctgtt
tatgttaataacactgaaagttacatccacagaaatttacctacattggaagagtatgat
tcatactggtggctgggtggcctggtcatctgctctctgctgaccctcatcgtgattttt
tactacctgggcttactgtgtggcgtgtgcggctatgacaggcatgccaccccgaccacc
cgaggctgtgtctccaacaccggaggcgtcttcctcatggttggagttggattaagtttc
ctcttttgctggatattgatgatcattgtggttcttacctttgtctttggtgcaaatgtg
gaaaaactgatctgtgaaccttacacgagcaaggaattattccggcatactggaagcata
agcagtgaattggaaagtctgaaggtaaatcttaatatctttctgttgggtgcagcagga
agaaaaaaccttcaggattttgctgcttgtggaatagacagaatgaattatgacagctac
ttggctcaggagagagtaactaggattctagcttctctggattttgctcagaacttcatc
acaaacaatacttcctctgttattattgaggaaactaagaagtatgggagaacaataata
ggatattttgaacattatctgcagtggatcgagttctctatcagtgagaaagtggcatcg
tgcaaacctgtggccaccgctctagatactgctgttgatgtctttctgtgtagctacatt
atcgaccccttgaatttgttttggtttggcataggaaaagctactgtatttttacttccg
gctctaatttttgcggtaaaactggctaagtactatcgtcgaatggattcggaggacgtg
tacgatgagtaa

>gi568815594r:15879395_16175906|GENSCAN_predicted_peptide_10|148_aa
MSNITQVESYEVDDIHIFHPKNRQFLMIQPNISQRLFVSHESRGALKNYDRALAFLTKNS
CRPQELQQTFLQKEFPLPQTRSQDPGESHLGHRSPRERVRSLWGPGPVRTLTSDSRSGTT
AAGYPHPRPHPQWMERRPKRGVAGHHSD

>gi568815594r:15879395_16175906|GENSCAN_predicted_CDS_10|447_bp
atgagtaacatcacacaagttgaatcatatgaggttgacgatattcacatcttccatcca
aaaaaccgacaatttcttatgattcaacccaacatatcgcagcggttgttcgtgtcgcat
gagtctcggggggcactcaagaactacgatcgtgcacttgctttcttaacaaagaacagc
tgccgccctcaggaactccagcaaacctttctccagaaagagtttcctttaccgcagact
cgttcccaagaccctggcgagtctcacctcggtcaccgttctccccgagagcgagtccga
agtctctggggccccggtccagttcgcacactcacctccgactcccgctccggaaccacg
gccgccggctacccccacccccgcccccatccccagtggatggaaagaagacccaagcgg
ggcgtcgcgggccaccactcagactaa

>gi568815594r:15879395_16175906|GENSCAN_predicted_peptide_11|134_aa
MGPVFHLTLMNHTMMEASSHLPDEKGEVLEAFLDCLPLADRAAQLSFGALTPVITYTHLP
NSFLNACPLEAFSRAVATASITPITWHPSSLCLGTPGVQIHEKGAHREESSNFYQPKAHL
QATSCPSILPFLPD

>gi568815594r:15879395_16175906|GENSCAN_predicted_CDS_11|405_bp
atgggccctgtatttcatctaaccctcatgaaccacacaatgatggaggcatcgtcccat
ttgccagatgagaaaggtgaggttctagaggcctttctcgactgcctgccactcgctgac
cgagcagctcagctttcctttggtgcactcacacctgtcatcacttacacgcatttgccc
aattctttcctgaatgcttgcccattagaagccttctccagggccgtggccaccgcctcc
atcacccccatcacctggcacccctcctctctatgcctgggaactcctggggtccagatc
cacgagaaaggagcccacagagaagaaagcagcaacttctaccagcctaaggcccacctc
caagctacttcctgtcccagcattctacccttcctgcctgattga

>gi568815594r:15879395_16175906|GENSCAN_predicted_peptide_12|246_aa
XLISLKVLNSIVLLGKSCQYVKEAKMEEKLSNPPATCTPGKPSSKSQNKCKPSQGLSTEE
NLSASITKQPIHQKENIIPLLVTSNSDQFLTTPDGDEKDITQDNSELKHRSSKKDLLEID
RWNPEKVVTLSQAPGSRWEQLAVGLGKNSGHQGSGELHWLAILVLLHISIANIVLPHIIV
ERDMLDFSCAFKQYFSAEASKVAVLTSCGCTTWISQQVHTYYHQQGHIYLPHGPPDSTYV
TISLPS

>gi568815594r:15879395_16175906|GENSCAN_predicted_CDS_12|741_bp
nngttgatatccctgaaagtacttaatagcatcgtgctgttggggaaatcgtgccagtat
gtgaaggaagccaaaatggaagagaagctgtcgaatcctcccgcaacctgcactccaggc
aagccgtccagtaaatcacagaacaaatgtaaaccctctcaaggcctttccacagaagaa
aacctgtctgcctccatcaccaaacaacctattcatcaaaaggaaaatatcataccatta
cttgtgacaagcaattctgatcagtttttgacaactccagatggtgacgagaaggacata
acgcaggacaattctgaattaaaacacagatcctcaaagaaagatttgttagagatagac
aggtggaacccagagaaggtagtgaccttgtcccaggctcctggcagcagatgggagcag
ctggcggtagggctgggcaaaaactctggacaccaaggctctggtgagcttcactggttg
gcaatacttgtgttgctacacatcagcattgccaacattgtgttaccacacatcattgtt
gaaagagacatgctggatttctcttgtgccttcaagcagtacttttcagctgaggcttct
aaggtggctgttctgaccagctgtggctgcaccacgtggatatcgcagcaagtccacacc
tactatcatcagcagggccacatctatctaccccatggacctcctgattctacctatgtg
accatcagtcttccatcttaa