GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:47:19

Sequence gi568815592f:166899413_167139975 : 240563 bp : 44.01% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1975   2067   93  0  0   66   66    87 0.696   4.68
 1.02 Intr +   2139   2361  223  2  1  -38  111   158 0.851   3.20
 1.03 Intr +   4203   4372  170  1  2  111   29    88 0.335   4.87
 1.04 Intr +   4766   4969  204  1  0   74   20   123 0.321   3.50
 1.05 Intr +   9566   9646   81  1  0  133   23    35 0.131   1.33
 1.06 Intr +  23313  23442  130  2  1  100   81    53 0.634   6.07
 1.07 Term +  26169  26329  161  1  2   56   43   116 0.672   2.00
 1.08 PlyA +  28088  28093    6                               1.05

 2.00 Prom +  28118  28157   40                              -3.06
 2.01 Sngl +  29687  29863  177  1  0   79   41   127 0.234   2.05
 2.02 PlyA +  30081  30086    6                               1.05

 3.09 PlyA -  30112  30107    6                              -0.45
 3.08 Term -  30379  30176  204  1  0   73   44   185 0.985   9.97
 3.07 Intr -  33487  33318  170  2  2   58   80    84 0.612   4.27
 3.06 Intr -  33857  33763   95  1  2   32   64    93 0.427   0.91
 3.05 Intr -  39596  39483  114  1  0   61   94   152 0.906  12.66
 3.04 Intr -  43677  43607   71  0  2   58  119    47 0.133   2.78
 3.03 Intr -  46935  46891   45  0  0   88   62    50 0.071   1.01
 3.02 Intr -  51300  51198  103  2  1   74   58    26 0.065  -1.62
 3.01 Init -  56770  56685   86  1  2  101  101   246 0.721  25.49
 3.00 Prom -  83907  83868   40                              -1.86

 4.00 Prom +  98099  98138   40                              -5.16
 4.01 Init + 100001 100102  102  1  0   99  100   281 0.426  30.64
 4.02 Intr + 103781 103835   55  1  1  108  107     8 0.521   3.25
 4.03 Intr + 116040 116104   65  1  2   69   78    48 0.164   0.34
 4.04 Intr + 122997 123223  227  2  2  111   59   174 0.798  13.58
 4.05 Intr + 125370 125482  113  0  2   66   89    38 0.708   1.72
 4.06 Intr + 127135 127203   69  2  0  127   59     3 0.347   0.45
 4.07 Intr + 133191 133230   40  1  1   46   82    66 0.273  -0.92
 4.08 Intr + 134463 134559   97  0  1   27   86   127 0.311   6.41
 4.09 Intr + 146543 146641   99  1  0   86  131    27 0.058   7.11
 4.10 Term + 168372 168479  108  2  0   17   41   167 0.631   3.41
 4.11 PlyA + 172310 172315    6                              -0.45

 5.04 PlyA - 172436 172431    6                               1.05
 5.03 Term - 175775 175741   35  0  2   98   45    55 0.498  -0.05
 5.02 Intr - 179361 179294   68  2  2  102   94     1 0.600   0.65
 5.01 Init - 183459 182183 1277  0  2   58   53   406 0.496  25.80
 5.00 Prom - 183816 183777   40                              -7.36

 6.02 PlyA - 183831 183826    6                               1.05
 6.01 Sngl - 186647 186354  294  2  0   88   54   225 0.788  14.80
 6.00 Prom - 192797 192758   40                              -5.86

 7.04 PlyA - 193887 193882    6                               1.05
 7.03 Term - 198759 198531  229  2  1   34   43   248 0.932  11.00
 7.02 Intr - 203575 203476  100  2  1  114   41    36 0.247   0.67
 7.01 Init - 208969 208945   25  1  1   70   94    42 0.147   1.64
 7.00 Prom - 222484 222445   40                              -4.16

 8.00 Prom + 225627 225666   40                              -3.06
 8.01 Init + 228896 228997  102  1  0   83   83    64 0.038   3.70
 8.02 Term + 236828 237943 1116  1  0  129   44   774 0.988  69.14
 8.03 PlyA + 238883 238888    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  60216  60337  122  1  2   58   50   106 0.846   2.44


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:166899413_167139975|GENSCAN_predicted_peptide_1|353_aa
MPGERTAGGENAGERTAGKTPCERTKEGERQGRERRENTEGGKCQVNAQGGKRLVNAQRR
KPGERTSSRTPSERTRGECCANTHGKHNRASTQWGERHANAQQEERFALAAQQCPSAKGS
RMLFSSSLPATAMGSRIPAGTPPHPRNVNTSGIRIGRCDPGTGGPPQPGSSHFTACSSLL
GPGNMQTLSSKTAQDPTFAFLNSSQGTPMLRAEAHAGGTPASGQLWVNFRGVRFQWNEEL
TVEDGRGLAGHVSTEGEVKYFQNTYYAQVAVFSTGAARAAHISGCSPRHMVIKTEEQMVT
VLTYATLSASTLYGPPLCHPAGIFYVTQQELEEKRPWSLGVEAQSHPGLQKNS

>gi568815592f:166899413_167139975|GENSCAN_predicted_CDS_1|1062_bp
atgcctggtgaacgtacagcgggaggggagaacgctggtgaacgcacagcggggaaaacg
ccatgtgaacgcacaaaggaaggagaacgccaggggagagaacgccgggagaacacagag
ggaggaaaatgccaggtgaacgcacaagggggaaaacgcctggtgaacgcacaaaggaga
aagccaggtgaacgcacaagcagcagaacgccaagtgaacgcacgaggggagaatgctgc
gccaacacacacgggaaacacaaccgcgcgagcacgcagtggggagaacggcacgcgaac
gctcagcaagaagaacgctttgccttggcagcgcagcagtgcccctctgcaaaggggtct
cgcatgctgttcagcagctctcttcccgccacagcgatgggcagccggatcccagctgga
actccgccacatcccaggaatgtgaataccagtggaatccggataggacggtgtgaccca
ggcacaggtgggccaccccaacccggctcctcacacttcacggcatgcagcagcctcctg
ggccctgggaacatgcagactctgagcagcaagactgcgcaggacccgacatttgcattt
ctaaacagctcccaggggacgccaatgctgcgggctgaggcccacgctggaggaacaccg
gccagtgggcagctttgggtgaacttcagaggtgttaggttccagtggaatgaggaactg
acagtggaggatggcagaggcctggcagggcatgtcagcactgagggggaggttaaatat
tttcaaaacacctactatgctcaagtagctgtgttcagtactggggcagcacgagcagcc
cacatctcagggtgcagtccaagacatatggtcatcaagacagaagagcagatggtgaca
gtcctcacctatgccacattgtccgcatctacactgtacggccctcccctgtgccatcca
gctggcatcttctatgtaacacaacaagagctggaagagaagaggccctggtccctgggc
gtggaggcgcagagccacccaggactgcaaaagaactcttaa

>gi568815592f:166899413_167139975|GENSCAN_predicted_peptide_2|58_aa
MSWGSGHMEQTQSELETPPRPTRHQRGLLPCVELFVLTGSLRQEGNRLRGENSSKRVP

>gi568815592f:166899413_167139975|GENSCAN_predicted_CDS_2|177_bp
atgtcctggggctctggtcacatggaacagacccagtctgagctagagacaccccccagg
cccaccaggcatcagcgtgggctcctgccatgcgtggagctcttcgtcttgacagggtcc
ctgcgccaagaaggcaacaggctccgaggggaaaactcgagcaagagagtcccctga

>gi568815592f:166899413_167139975|GENSCAN_predicted_peptide_3|295_aa
MRPAALRGALLGCLCLALLCLGGADKRLRASVSRPFSLEHPEPGHCLDLHLRAYPARCVK
LTLAPGLLGQMTDVGIWSDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALN
SQKKYFGRSLELYRELDLNSCSRDRCVIHKSRDIYDVDLYGKCLQTLALEKGSRKMIACR
ALTVLTWTHVRIDEGHVPAMFAQSSVFRELITGVAKATGATHLLSCFQDEEVQTIGQIEL
CLTKQDQQLQNCTEPGEQPSPKQEVWLANGAAESRGLRVCEDGPVFYPPPKKTKH

>gi568815592f:166899413_167139975|GENSCAN_predicted_CDS_3|888_bp
atgcgccctgcagccctgcgcggggccctgctgggctgcctctgcctggcgttgctttgc
ctgggcggtgcggacaagcgcctgcgtgcgtcagtgtccaggcccttctcattggagcac
ccagagccaggacactgcctggatctgcacctcagggcgtaccctgctcggtgtgtcaag
ctgaccctggccccaggacttctgggtcagatgaccgacgtgggaatctggtcggatctt
ttgccagaaatgagggcatactggcctgacgtaattcactcgtttcccaatcgcagccgc
ttctggaagcatgagtgggaaaagcatgggacctgcgccgcccaggtggatgcgctcaac
tcccagaagaagtactttggcagaagcctggaactctacagggagctggacctcaacagc
tgcagtagggaccgatgtgtcatccacaaatcccgggatatttacgacgtggacctttac
ggaaaatgtttgcagactcttgccttagagaaaggaagccgtaagatgatcgcttgcagg
gccctcaccgtcctcacctggactcatgtgcgaatagatgagggacatgtgcctgccatg
tttgcccagagctcggtgttcagggaactgattacaggggtggcaaaagccacaggggcc
acacatttgctgagctgcttccaggatgaggaagtacagacaattggtcagatagaactg
tgcctcactaagcaagaccagcagctgcaaaactgcaccgagccgggggagcagccgtcc
cccaagcaggaagtctggctggcaaatggggccgccgagagccggggtctgagagtctgt
gaagatggcccagtcttctatcccccacctaaaaagaccaagcattga

>gi568815592f:166899413_167139975|GENSCAN_predicted_peptide_4|324_aa
MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKNKTPLVNESLKKFLNTKDDAMLHVVV
EVVHSKTPDGAIRMKANDEANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKD
KAGLCPDEDDMEGDSFFDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGA
PSLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEI
EEDLSVEIDDINTSDKHPYCPSARPFLAALMGSSLLRALLHQGAVLSLPNHKQTISKDKE
EANSITIQLDHIDNCGPLHPTTAE

>gi568815592f:166899413_167139975|GENSCAN_predicted_CDS_4|975_bp
atggcggcgacggcggccgcagtggtggccgaggaggacacggagctgcgggacctgctg
gtgcagacgctggagaacagcggggtcctgaaccgcatcaagaacaaaactcctttagtt
aatgagagcctgaaaaagtttttaaataccaaagacgatgctatgttgcatgtggtggtt
gaggttgtacacagcaagactccagatggagccatccgcatgaaggccaatgatgaggcc
aatcagagtgatacaagtgtctccttgtcagaacccaagagcaaaagcagccttcactta
ctgtcccatgaaacaaaaattggatcttttctaagcaacagaactttagatggcaaagac
aaagctggcctttgtccagatgaagatgatatggaaggagattctttctttgatgatccc
attcctaagccagagaaaacttacggtttgaggaaggaacctaggaagcaagcaggaagt
ctggcctcgctctcggatgcaccccccttaaaaagtggactcagctccctggcgggagcc
ccttctttaaaagactctgagagtaaaaggggaaatacagttttgaaagatctgaaattg
atcagtgataaaattggatcacttggattaggaactggagaagatgatgactatgttgat
gattttaatagtaccagccatcgctcagagaaaagtgagataagtattggtgaagagata
gaagaagacctttctgtggaaatagatgacatcaataccagtgataagcacccctactgc
cccagtgccaggccttttctagcagctctcatgggttcatccctgctgcgggcattgctc
caccaaggggcagtgctctccctgccgaaccataagcagacaatcagcaaggataaagaa
gaggcaaacagcatcaccattcagctggaccatattgacaattgtggaccacttcaccca
acaacagcagaataa

>gi568815592f:166899413_167139975|GENSCAN_predicted_peptide_5|459_aa
MIVYLENPIVSAQNLLKLISNFSRVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIAS
KRIKYLGIQLTRHVKDLFKENYKPLLNKIKEDTNKWKNIPCSWVGRINIVKMAILPKVIY
RFNAIPIKLPMTFFTELEKTTLKFIWNQKRACIAKSILSQKNAAGGIMLPDFKLYYKATV
TKTAWYWYQNRDIDQWNRTELSKIMPHIYNHLIFDKPDKNKKWVKDSLFNKCCWENWLAI
CRKLKLDPILTPYTKINSRWIKDLNARPKTIKTLEENLGNTIQDIGMGKDFMSKTPKAMA
TKDKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKIFASYSSDKGLISRIYNELKQIYKK
NTNNPINKWAKDMNRHFSKEDIYAAKRHMKKCSSSLAIREMQIKTTMRYHLTSVRMAIIK
KSGNNRVEPRAAPPSDSPVGQAWEDTEPGYHFQYNIEQE

>gi568815592f:166899413_167139975|GENSCAN_predicted_CDS_5|1380_bp
atgattgtatatctagaaaaccccatcgtctcagcccaaaatctccttaagctgataagc
aacttcagcagagtctcaggttacaaaatcaatgtgcaaaaatcacaagcattcttatac
accaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatacctaggaatccaacttacaaggcacgtgaaggacctcttcaaggag
aactacaaaccgctgctcaacaaaataaaagaggatacaaacaaatggaagaacattcca
tgctcatgggtaggaagaatcaatatcgtgaaaatggccatattgcccaaggtaatttat
agattcaatgccattcccatcaagctaccaatgactttcttcacagaattggaaaaaact
actttaaagttcatatggaaccaaaaaagagcctgcatcgccaagtcaatcctaagccaa
aagaacgcagctggaggcatcatgctacctgacttcaaactatactacaaggctacagta
accaaaacagcatggtactggtaccaaaacagagatatagaccaatggaacagaacagag
ctctcaaaaataatgccgcatatctacaaccatctgatctttgacaaacctgacaaaaac
aagaaatgggtaaaggattccctatttaataaatgctgctgggaaaactggctagccata
tgtagaaagctgaaactggatcccatccttacaccttacacaaaaattaattcaagatgg
attaaagacttaaatgctagacctaaaaccataaaaaccctagaagaaaacctaggcaat
accattcaggacataggcatgggcaaagacttcatgtctaaaacaccaaaagcaatggca
acaaaagacaaaattgataaatgggatctaattaaactaaagagcttctgcacagcaaaa
gaaactaccatcagagtgaacaggcaacctacagaatgggagaaaatttttgcaagctac
tcctctgacaaagggctaatatccagaatctacaatgaactcaaacaaatttacaagaaa
aatacaaacaaccccatcaacaagtgggcgaaggatatgaacagacacttctcaaaagaa
gacatttatgcagccaaaagacacatgaaaaaatgctcatcatcactggccatcagagaa
atgcaaatcaaaaccacaatgagataccatctcacatcagttagaatggcgatcattaaa
aagtcaggaaacaacagggtggaaccacgtgcagcacctccaagtgacagccctgtgggg
caggcctgggaggacacagagccagggtatcacttccagtacaatattgagcaggagtga

>gi568815592f:166899413_167139975|GENSCAN_predicted_peptide_6|97_aa
MGKKQSRKTENSKNQNASPPPKECSSSPATEQSWTENDFDELREGDFRQSNYSKLKEEVR
THGKEVKNLEKRLDEWLTRITSAEKSLKDPMELKTTA

>gi568815592f:166899413_167139975|GENSCAN_predicted_CDS_6|294_bp
atggggaaaaaacagagcagaaaaactgaaaattctaaaaatcagaatgcctctcctcct
ccaaaggaatgcagctcctcaccagcaacggaacaaagctggacggagaatgactttgat
gagttgagagaaggagacttcagacaatcaaactactccaagctaaaggaggaagttcga
acccatggcaaagaagttaaaaaccttgaaaaaagattagacgaatggctaactagaata
accagtgcagagaaatccttaaaggacccgatggagctgaaaaccacagcatga

>gi568815592f:166899413_167139975|GENSCAN_predicted_peptide_7|117_aa
MGLVSLVAALIFMSVLAEDVNVVLRYAVMWMTTECCLRSPIRLGVALWNPLDEDISLCRS
AGSSTRKDPRRRKGTLGAQDDSRPELQKESCEETQAAMTRHQETLQATLSNEHPVGI

>gi568815592f:166899413_167139975|GENSCAN_predicted_CDS_7|354_bp
atggggctagtctccctggtggcagcgctgatcttcatgtcagtgttggcagaagatgtg
aatgtggtgctgagatatgcagtgatgtggatgacgacagagtgctgccttcgctctccc
atcaggctgggagtggctctgtggaatccccttgatgaagacatctccctgtgtcggagc
gccggctccagcacccggaaggacccgagaaggcggaaaggcacccttggagcccaagac
gacagccgccctgagctccaaaaggaaagctgtgaagaaacccaggcggccatgactcga
catcaggaaacacttcaggccacgctgtctaatgaacaccctgtgggcatttag

>gi568815592f:166899413_167139975|GENSCAN_predicted_peptide_8|405_aa
MILPTSAVPCVRCLRALSIIGLESLSDHGGEYPEESMNFSDVFDSSEDYFVSVNTSYYSV
DSEMLLCSLQEVRQFSRLFVPIAYSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMA
IADILFVLTLPFWAVSHATGAWVFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQ
ATKSFRLRSRTLPRSKIICLVVWGLSVIISSSTFVFNQKYNTQGSDVCEPKYQTVSEPIR
WKLLMLGLELLFGFFIPLMFMIFCYTFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIP
HNMVLLVTAANLGKMNRSCQSEKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLK
ILKDLWCVRRKYKSSGFSCAGRYSENISRQTSETADNDNASSFTM

>gi568815592f:166899413_167139975|GENSCAN_predicted_CDS_8|1218_bp
atgattctgccgacaagtgctgtcccctgtgtccggtgcctccgcgctctatctattatt
gggttggaaagccttagtgaccacggtggagagtacccagaggaatcaatgaatttcagc
gatgttttcgactccagtgaagattattttgtgtcagtcaatacttcatattactcagtt
gattctgagatgttactgtgctccttgcaggaggtcaggcagttctccaggctatttgta
ccgattgcctactccttgatctgtgtctttggcctcctggggaatattctggtggtgatc
acctttgctttttataagaaggccaggtctatgacagacgtctatctcttgaacatggcc
attgcagacatcctctttgttcttactctcccattctgggcagtgagtcatgccaccggt
gcgtgggttttcagcaatgccacgtgcaagttgctaaaaggcatctatgccatcaacttt
aactgcgggatgctgctcctgacttgcattagcatggaccggtacatcgccattgtacag
gcgactaagtcattccggctccgatccagaacactaccgcgcagcaaaatcatctgcctt
gttgtgtgggggctgtcagtcatcatctccagctcaacttttgtcttcaaccaaaaatac
aacacccaaggcagcgatgtctgtgaacccaagtaccagactgtctcggagcccatcagg
tggaagctgctgatgttggggcttgagctactctttggtttctttatccctttgatgttc
atgatattttgttacacgttcattgtcaaaaccttggtgcaagctcagaattctaaaagg
cacaaagccatccgtgtaatcatagctgtggtgcttgtgtttctggcttgtcagattcct
cataacatggtcctgcttgtgacggctgcaaatttgggtaaaatgaaccgatcctgccag
agcgaaaagctaattggctatacgaaaactgtcacagaagtcctggctttcctgcactgc
tgcctgaaccctgtgctctacgcttttattgggcagaagttcagaaactactttctgaag
atcttgaaggacctgtggtgtgtgagaaggaagtacaagtcctcaggcttctcctgtgcc
gggaggtactcagaaaacatttctcggcagaccagtgagaccgcagataacgacaatgcg
tcgtccttcactatgtga