GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:53:44

Sequence gi568815593r:62289013_62503772 : 214760 bp : 39.25% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3372   3534  163  2  1   52   71   110 0.734   4.33
 1.02 Term +   5926   6551  626  2  2   52   42   307 0.801  16.06
 1.03 PlyA +   7273   7278    6                               1.05

 2.00 Prom +  14407  14446   40                              -4.15
 2.01 Init +  14803  14846   44  0  2   61   80    18 0.238  -1.76
 2.02 Intr +  16690  16750   61  1  1   96   95    14 0.294   0.72
 2.03 Intr +  17305  17524  220  0  1  108   89   132 0.701  12.25
 2.04 Term +  18071  18162   92  0  2   67   49    92 0.793   0.10
 2.05 PlyA +  18494  18499    6                               1.05

 3.00 Prom +  35730  35769   40                              -3.35
 3.01 Init +  36299  36347   49  1  1   86   58    63 0.328   2.26
 3.02 Intr +  44472  44712  241  1  1   47   32   159 0.454   1.89
 3.03 Intr +  45636  45841  206  0  2  106   94   125 0.539  12.82
 3.04 Intr +  58118  58212   95  0  2   70   94    67 0.039   4.26
 3.05 Intr +  59036  59155  120  1  0   36   96   113 0.854   6.67
 3.06 Intr +  61054  61108   55  0  1   77   88    33 0.955  -0.17
 3.07 Intr +  63576  63698  123  1  0   86   36    95 0.919   3.74
 3.08 Intr +  64263  64363  101  1  2   82   79   105 0.969   7.91
 3.09 Intr +  66147  66242   96  2  0   93   58    65 0.826   3.29
 3.10 Intr +  68679  68733   55  2  1   72   86   -14 0.893  -5.57
 3.11 Intr +  69125  69287  163  0  1   64   96    93 0.941   5.81
 3.12 Intr +  72230  72320   91  2  1   84  103    67 0.974   6.88
 3.13 Intr +  74166  74308  143  2  2   65   99    75 0.997   4.53
 3.14 Intr +  74683  74887  205  1  1   31   94   125 0.990   5.68
 3.15 Intr +  76231  76341  111  0  0   88  115    85 0.999  10.86
 3.16 Intr +  77402  77469   68  1  2   99   52    14 0.597  -4.32
 3.17 Intr +  84675  84825  151  0  1   64   82   177 0.936  13.94
 3.18 Intr +  88649  88750  102  1  0   65  103    91 0.994   7.75
 3.19 Intr +  92106  92241  136  2  1   78   43   176 0.894  11.32
 3.20 Term +  96472  96557   86  2  2   81   40    91 0.804   0.44
 3.21 PlyA +  97349  97354    6                               1.05

 4.12 PlyA -  97963  97958    6                               1.05
 4.11 Term - 101807 101747   61  1  1   49   42    89 0.743  -3.30
 4.10 Intr - 101970 101864  107  0  2   52   91   126 0.903   7.39
 4.09 Intr - 105035 104943   93  2  0   85   94    84 0.990   7.94
 4.08 Intr - 105595 105472  124  0  1  127  106    61 0.997  11.47
 4.07 Intr - 107915 107780  136  0  1  -12   35   102 0.227  -6.39
 4.06 Intr - 109498 109417   82  1  1   83   82    73 0.252   4.49
 4.05 Intr - 109727 109634   94  1  1   91   91    56 0.941   5.25
 4.04 Intr - 109869 109808   62  0  2   83   94    39 0.915   0.61
 4.03 Intr - 113110 113024   87  1  0   53   70    76 0.719   1.55
 4.02 Intr - 114334 114261   74  2  2  105   98     9 0.849   1.81
 4.01 Init - 114760 114682   79  1  1  101   64   119 0.446  10.11
 4.00 Prom - 119269 119230   40                              -4.25

 5.04 PlyA - 119294 119289    6                               1.05
 5.03 Term - 124075 123444  632  2  2   52   37   233 0.490   8.09
 5.02 Intr - 138513 138410  104  2  2  101   18    70 0.054   0.20
 5.01 Init - 143405 143248  158  2  2   73   47   124 0.232   6.23
 5.00 Prom - 144788 144749   40                              -5.85

 6.00 Prom + 146183 146222   40                              -5.75
 6.01 Init + 148268 148405  138  1  0   49  119    95 0.504   8.89
 6.02 Intr + 153971 154071  101  1  2   82   89    41 0.953   1.59
 6.03 Intr + 160915 160987   73  1  1  108   92    63 0.996   7.19
 6.04 Intr + 162718 162921  204  0  0  102   95   150 0.879  15.57
 6.05 Intr + 176986 177093  108  0  0   49   89    57 0.263   1.46
 6.06 Intr + 178119 178251  133  2  1  107   74    21 0.389   1.90
 6.07 Intr + 181238 181296   59  0  2   77  115    52 0.394   4.48
 6.08 Intr + 194089 194281  193  0  1   94   86    71 0.548   5.64
 6.09 Intr + 194998 195150  153  2  0   84   46    64 0.503   0.92
 6.10 Intr + 198829 198849   21  2  0   94  116     6 0.280   0.60
 6.11 Intr + 200290 200337   48  2  0   73   84    46 0.557   0.43
 6.12 Term + 201103 201218  116  2  2   95   38   113 0.958   4.75
 6.13 PlyA + 202339 202344    6                               1.05

 7.03 PlyA - 202597 202592    6                               1.05
 7.02 Term - 208075 207948  128  2  2   57   48    75 0.180  -2.14
 7.01 Init - 213122 213071   52  2  1   58  121    45 0.774   6.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  58135  58212   78  0  0   51   94    73 0.899   5.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:62289013_62503772|GENSCAN_predicted_peptide_1|262_aa
PPLRIPRQTWTGLDLQQTPTDLQLRVLTVRRKTNKQKGHPHQKPICTSPSSKTKEIQSTI
REYYKHLYVNKLENLEEMDKFLDTYTLPRQNQEEVESLNRPITGSEIEAIINSLPTKKSP
GPDGFTAEFYQRYKEELLPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFT
PISLMNITAKMLNEILANRIQQHIKKLIHHDQMGFIPGMQGWFNLCKSVNIIQHINRIND
KNHMIISIDAEKVFDKIQQTSC

>gi568815593r:62289013_62503772|GENSCAN_predicted_CDS_1|789_bp
cctccgctgcggatacccaggcaaacatggactggactggacctccagcaaactccaaca
gacctgcagctgagggtcctgactgttagaaggaaaactaacaaacagaaaggacatcca
caccaaaaacccatctgtacgtcaccatcatcaaagaccaaagaaatacaatctaccatc
agagaatactataaacacctctacgtaaataaactagaaaatctagaagaaatggataaa
ttcctcgacacatacacgctcccaagacaaaaccaggaagaagttgaatctctgaataga
ccaataacaggctctgaaattgaggcaataattaatagcttaccaaccaaaaaaagtcca
ggaccagatggattcacagccgaattctaccagaggtacaaggaggagctgttaccattc
cttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattttatgag
gccagcatcatcctgataccaaagcctggcagagacacaacaaaaaaagagaattttaca
ccaatatccctgatgaacatcactgcaaaaatgctcaatgaaatattggcaaaccgaatc
cagcagcacatcaaaaagcttatccaccatgatcaaatgggcttcatccctgggatgcaa
ggctggttcaacctatgcaaatcagtaaacataatccagcatataaacagaatcaatgac
aaaaaccacatgattatctcaatagatgcagaaaaggtctttgacaaaattcaacaaact
tcatgctaa

>gi568815593r:62289013_62503772|GENSCAN_predicted_peptide_2|138_aa
MKVLVNTYADVYQKNVTGWETYTKCAWEGCLGQLPLLLAAPLAFTLSPGPARPRATAPPP
TPTPPPPRLFRPPVPLPRPAAAAPDEVMATANFGKIQIGIYVEIKRSDGLPGFVVDHAAF
FFATSWEKNVENIALSHE

>gi568815593r:62289013_62503772|GENSCAN_predicted_CDS_2|417_bp
atgaaagtcttggtaaatacatatgctgatgtgtaccaaaaaaacgtaactggatgggaa
acctacaccaagtgtgcttgggagggctgcttgggtcagctacctctgctccttgcggcc
ccgcttgcgttcacgctgtcgcccgggccggcgcggccgcgggcaaccgctccccctccc
acacctaccccgccccctccccgccttttccgccctccggtccccctccctcggcccgct
gctgctgctccagatgaggtgatggcaacggccaacttcggcaagatccagatcgggatt
tacgtggagatcaagcgcagcgatggcctccccggtttcgtcgtcgaccatgctgctttc
ttttttgccacttcttgggagaaaaatgtggagaatatcgcgctgagccatgaataa

>gi568815593r:62289013_62503772|GENSCAN_predicted_peptide_3|798_aa
MGFRHVGQAGLELLTSALAFNLCKFSEITLQKQCQAEDTVALEEMIMDISSTQLHTQKLQ
LPYTRSSRYGGSLPTPYHTDSSPYSPAYLSPPQVSSCPLSLLTGPADARRSQQQLPKQFL
PVSPTLSSIVQGVPLETSNLHTQPHTPKSLQQPELPSQACSAQPSGRIHQAMVTSLNEDN
ESVTVEWIENGDTKGKEIDLESIFSLNPDLVPDEEIEPSPETPPPPASSAKVNKIVKNRR
TVASIKNDPPSRDNRVVGSARARPSQFPEQSSSAQQNGSVSDISPVQAAKKEFGPPSRRK
SNCVKEVEKLQEKREKRRLQQQELREKRAQDVDATNPNYEIMCMIRDFRGSLDYRPLTTA
DPIDEHRICVCVRKRPLNKKETQMKDLDVITIPSKDVVMVHEPKQKVDLTRYLENQTFRF
DYAFDDSAPNEMVYRFTARPLVETIFERGMATCFAYGQTGSGKTHVFDLLNRKTKLRVLE
DGKQQVQVVGLQEREVKCVEDVLKLIDIGNSCRTSGQTSANAHSSRSHAVFQIILRRKGK
LHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKPHTPFRASK
LTQVLRDSFIGENSRTCMIATISPGMASCENTLNTLRYANRVKELTVDPTAAGDVRPIMH
HPPNQIDDLETQWGVGSSPQRDDLKLLCEQNEEEVSPQLFTFHEAVSQMVEMEEQVVEDH
RAVFQESIRWLEDEKALLEMTEEVDYDVDSYATQLEAILEQKIDILTELRDKVKSFRAAL
QEEEQASKQINPKRPRAL

>gi568815593r:62289013_62503772|GENSCAN_predicted_CDS_3|2397_bp
atggggtttcgccatgttggccaggctggtctcgaactcctgacctcagccttggctttc
aatctgtgcaagtttagtgagatcacgctgcagaagcagtgtcaggctgaggacacagtg
gccctcgaggaaatgataatggacatcagctccacccagttacacacccaaaaactgcaa
ctgccatacacaaggagctcccgttatggtggttctctgccaacaccctaccacactgac
agctctccctatagtcctgcctacttatctcctccccaagtgtccagctgccccctaagt
ttgctcacaggtccagccgatgccagaaggtcgcaacagcagctacccaaacagtttttg
ccagtgtcacccaccctgtcttccatcgttcagggtgtccccctggagaccagtaatctg
cacacccagccacacaccccaaagtctctacagcagccagagctgccctctcaggcctgc
tcagcgcagccctcaggccgaatacatcaagcaatggtaacatctttaaatgaagataat
gaaagtgtaactgttgaatggatagaaaatggagatacaaaaggcaaagagattgacctg
gagagcatcttttcacttaaccctgaccttgttcctgatgaagaaattgaacccagtcca
gaaacacctccacctccagcatcctcagccaaagtaaacaaaattgtaaagaatcgacgg
actgtagcttctattaagaatgaccctccttcaagagataatagagtggttggttcagca
cgtgcacggcccagtcaatttcctgaacagtcttcctctgcacaacagaatggtagtgtt
tcagatatatctccagttcaagctgcaaaaaaggaatttggacccccttcacgtagaaaa
tctaattgtgtgaaagaagtagaaaaactgcaagaaaaacgagagaaaaggagattgcaa
cagcaagaacttagagaaaaaagagcccaggacgttgatgctacaaacccaaattatgaa
attatgtgtatgatcagagactttagaggaagtttggattatagaccattaacaacagca
gatcctattgatgaacataggatatgtgtgtgtgtaagaaaacgaccactcaataaaaaa
gaaactcaaatgaaagatcttgatgtaatcacaattcctagtaaagatgttgtgatggta
catgaaccaaaacaaaaagtagatttaacaaggtacctagaaaaccaaacatttcgtttt
gattatgcctttgatgactcagctcctaatgaaatggtttacaggtttactgctagacca
ctagtggaaactatatttgaaaggggaatggctacatgctttgcttatgggcagactgga
agtggaaaaactcatgtgtttgacttgctaaacaggaaaacaaaattaagagttctagaa
gatggaaaacagcaggttcaagtggtgggattacaggaacgggaggtcaaatgtgttgaa
gatgtactgaaactcattgacataggcaacagttgcagaacatccggtcaaacatctgca
aatgcacattcatctcggagccatgcagtgtttcagattattcttagaaggaaaggaaaa
ctacatggcaaattttctctcattgatttggctggaaatgaaagaggagctgatacttcc
agtgcggacaggcaaactaggcttgaaggtgctgaaattaataaaagccttttagcactc
aaggagtgcatcagagccttaggtagaaataaacctcatactcctttccgtgcaagtaaa
ctcactcaggtgttaagagattctttcataggtgaaaactctcgtacctgcatgattgcc
acaatctctccaggaatggcatcctgtgaaaatactcttaatacattaagatatgcaaat
agggtcaaagaattgactgtagatccaactgctgctggtgatgttcgtccaataatgcac
catccaccaaaccagattgatgacttagagacacagtggggtgtggggagttcccctcag
agagatgatctaaaacttctttgtgaacaaaatgaagaagaagtctctccacagttgttt
actttccacgaagctgtttcacaaatggtagaaatggaagaacaagttgtagaagatcac
agggcagtgttccaggaatctattcggtggttagaagatgaaaaggccctcttagagatg
actgaagaagtagattatgatgtcgattcatatgctacacaacttgaagctattcttgag
caaaaaatagacattttaactgaactgcgggataaagtgaaatctttccgtgcagctcta
caagaggaggaacaagccagcaagcaaatcaacccgaagagaccccgtgccctttaa

>gi568815593r:62289013_62503772|GENSCAN_predicted_peptide_4|332_aa
MPKVKSGAIGRRRGRQEQRRELKSAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVV
LEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP
FFDTCVANLPYQVCDKRLELLPNFERLTVQVVNIAKNESELQRIVMEMKYGFTSVILKTK
QSESDAYQETEWLQSKQKQTSQEQRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLAR
VDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQIIPEDFSIADKIQQILTSTGFSD
KRARSMDIDDFIRLEILKAFKRYKVLPGRVIA

>gi568815593r:62289013_62503772|GENSCAN_predicted_CDS_4|999_bp
atgccgaaggtcaagtcgggggccatcggccgccgccgcgggcggcaggagcagcgccgg
gagctgaagagcgctggaggactcatgttcaacacggggattgggcagcacattttgaaa
aatcctctcattattaacagcattatcgataaggctgccttaagaccaactgatgtagtg
ctggaagttggacctggaactggcaacatgactgtaaagttgttagaaaaggcaaaaaag
gttgttgcttgtgaacttgacccaaggctagtagctgaacttcacaaaagagttcagggc
acgcctgtggccagcaaacttcaagtactggtgggtgatgtgctgaaaacagatttgcca
ttctttgatacttgtgtggcaaatttgccttatcaggtttgtgacaaaagactagagtta
ctgccaaattttgaaagacttacagttcaggtggtgaacatagccaaaaatgagtcagaa
ttacaaagaattgtaatggagatgaaatatggctttaccagtgtgatcctaaagacaaag
cagagtgaaagtgatgcctaccaagaaacggagtggctccagtcaaagcaaaagcagacc
agtcaagagcaaaggtgtgctatacttatgtttcaaagagaatttgccctccgactggtt
gcaaaacctggagataagttatactgcagactctcaattaatacacagctgttggcacgt
gtggaccatctaatgaaagtgggaaagaataacttcagaccaccgcccaaggtggaatcc
agtgttgtaaggatagaacctaagaatccaccaccacccatcaattttcagataatacca
gaagatttcagcatagcagataaaatacagcaaatcctaaccagcacaggttttagtgac
aaacgggcccgttccatggacatagatgacttcatcagattggagattttaaaggctttt
aagcggtataaggtgctacctgggagagttattgcatag

>gi568815593r:62289013_62503772|GENSCAN_predicted_peptide_5|297_aa
MGSQPASISHTPQLYAAEILYQANTARGLGLSSSIQAPLLRQKLYHRAAGKEYVAQFLAG
HGLTDTGPWPEGWGHLPYDTSCRLSKTGCANSQVCRPPLPRYRYPSSPGSPTFLPPLGTR
VPNPLPSTPARSVALGPGPHRLVRSGIARPSRSHFPTRSGVGWSLSPRCQTPRRRLLMPK
AASRNTPCLASQLQTTRTRENYVTGDQRACDRQREKAIGERREGEGGALSLNQKARGIQI
SCVRLRSALAQYKEPGVRTSRICHHGNHRSGFSDSQGAQLFPALIEASIRTISRFIF

>gi568815593r:62289013_62503772|GENSCAN_predicted_CDS_5|894_bp
atgggtagccagccagccagtatttctcatacaccccagctatatgctgcagaaattctg
taccaggcaaacacagctagaggtctagggctctcttcttccatccaggcaccactcctg
cggcagaagctctaccacagggcagcaggcaaagaatatgtggcccagttcctagcaggc
cacggactgactgatactggtccatggcctgagggctggggacacctgccctatgacact
tcatgcagactgtcaaaaactggttgcgcaaacagccaagtctgcaggccgcccttgcct
cgctaccgttatccctcatctcctggtagccccactttcctcccgcctctcgggactcgg
gtgcccaacccactcccttccactcccgcgcgctcggtggctctcgggccggggcctcac
cgtttggttcggtcgggaattgcccggccctcccgctcccacttcccaacacgaagtggc
gtcggttggtccctctccccacgctgccagaccccacgccgccgcctactgatgccgaaa
gcggcttctaggaacacgccatgtttggcgtcgcagctccaaacgacgcggacgcgcgaa
aactacgtcacaggagaccagcgcgcatgcgaccggcagagagagaaggcgataggcgaa
cggcgggaaggggaaggaggggctttgtctttgaaccaaaaggcgcggggtatccaaatc
agttgtgtgcgcttgcgcagtgcgcttgcgcagtataaagagccaggagtccggactagc
cggatctgtcaccatggaaaccataggtctggtttctccgactcccagggagctcaattg
tttcctgcgttgattgaagcttcaatcagaaccatttcacgctttatattctag

>gi568815593r:62289013_62503772|GENSCAN_predicted_peptide_6|448_aa
MDLNSASTVVLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRW
LAVLYFKHGIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLD
CPRQWPELIPTLIESVKVQDDLRQHRALLTFYHVTKTLASKRLAADRKLFYDGSRAENLI
PLQNLRGDEKLSHDSLMVQIKRRVGDGLLASGIYNFACSLWNHHTDTFLQEVSSGNEAAI
LSSLERTLLSLKVLRKLTVNGFVEPHKNMEVMLLDFLDQHPFSFTPLIQRSLEFSVSYVF
TEVGEGVTFERFIVQCMNLIKMIVKNYAYKPSKNFEDSSPETLEAHKIKMAFFTYPTLTE
ICRRLVSHYFLLTEEELTMWEEDPEGFKMMQTLQGPTNVEDMNALLIKDAVYNAVGLAAY
ELFDSVDFDQWFKNQLLPELQVIHNRQV

>gi568815593r:62289013_62503772|GENSCAN_predicted_CDS_6|1347_bp
atggatctcaatagtgccagcactgttgttcttcaggtgttaacacaggccaccagtcag
gatactgctgtgttaaaaccagctgaggagcagttgaagcagtgggagacacagccaggt
ttctattcagtgttgctgaatattttcaccaaccacactttggatataaatgtaaggtgg
cttgctgtactgtattttaaacatggaattgatcgctactggagacgtgtagcacctcat
gctctctcagaggaggagaaaactactctgcgtgcagggctcatcaccaacttcaatgaa
ccaataaaccagattgcaactcagattgcagtgctcattgcaaaagttgctagattggat
tgtcccagacagtggcctgaactaattcccactcttatagagtctgttaaagtccaggat
gatcttcgacagcacagagcattacttaccttctatcatgttaccaagacactggcatct
aaacgacttgctgctgatagaaaactattttatgatgggagtagggcagaaaaccttata
cctcttcagaacctgagaggtgatgagaaactgtctcatgatagcctaatggtgcagata
aagagacgagtaggagatggtcttttagcttctggaatttataattttgcctgctctctg
tggaatcaccacacagacacattcctgcaagaagtttcttctggcaatgaagctgcaatt
ttgagttcactagaacgaacactgctatcattgaaagtgctgcgtaagttaactgttaat
ggatttgtggaacctcataagaatatggaggtgatgcttttggacttcttggatcagcat
cctttttcatttactcctctaattcagagatcactggaattttctgtaagctatgttttt
acagaagttggtgaaggcgttacatttgaacgattcattgtccaatgtatgaatcttatt
aagatgattgtcaaaaattatgcttataagccatccaaaaattttgaagatagcagccct
gaaactcttgaagcccataagattaagatggcattcttcacatatcctactttgacagag
atatgtagaagattagtctctcattatttcctattaactgaagaagaactgacaatgtgg
gaagaagacccagaaggctttaaaatgatgcaaacacttcaaggacccacaaatgtggaa
gatatgaatgcactgttaatcaaagatgctgtgtataatgctgttggattagctgcttat
gagctctttgacagtgttgattttgatcagtggtttaaaaaccagcttcttccagaatta
caagtcattcacaataggcaagtataa

>gi568815593r:62289013_62503772|GENSCAN_predicted_peptide_7|59_aa
MNEKKMQVNSTSKYCYKAALRKENADSESQRGIRFIRIYILVTQQKQCSNWRKQLLQLV

>gi568815593r:62289013_62503772|GENSCAN_predicted_CDS_7|180_bp
atgaatgagaagaaaatgcaggtcaacagtacttccaaatactgctacaaagcagccctt
aggaaagagaatgcagattctgaaagccagagaggaattcgattcatcaggatctacata
cttgtgacacagcagaagcagtgcagcaactggaggaaacaacttctccagttagtatag