GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:03:20

Sequence gi568815587f:63439515_63646236 : 206722 bp : 44.09% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +     26    805  780  1  0   60   32   209 0.954   8.50
 1.02 PlyA +   1796   1801    6                               1.05

 2.05 PlyA -   2532   2527    6                               1.05
 2.04 Term -  24081  23989   93  0  0   95   49    71 0.717   1.73
 2.03 Intr -  26858  26596  263  0  2  114   64   352 0.833  32.61
 2.02 Intr -  28951  28843  109  1  1   95   71   128 0.999  11.66
 2.01 Init -  34925  34917    9  2  0   57  106     0 0.306  -0.82
 2.00 Prom -  37967  37928   40                              -6.06

 3.00 Prom +  40970  41009   40                              -4.66
 3.01 Init +  42194  42326  133  1  1   78   47    67 0.500   1.90
 3.02 Term +  45048  45388  341  1  2   27   36   303 0.568  13.70
 3.03 PlyA +  45953  45958    6                               1.05

 4.03 PlyA -  47552  47547    6                               1.05
 4.02 Term -  48752  48742   11  0  2   94   40    10 0.050  -4.84
 4.01 Init -  51520  51373  148  1  1   85   76   120 0.893  10.94
 4.00 Prom -  57917  57878   40                              -3.56

 5.00 Prom +  62500  62539   40                              -2.86
 5.01 Init +  66945  67013   69  2  0   44  117    61 0.926   5.65
 5.02 Intr +  69039  69127   89  2  2   72  110    91 0.995   8.47
 5.03 Intr +  69264  69477  214  0  1   24   67   241 0.952  14.32
 5.04 Intr +  70264  70383  120  0  0  113  101   175 0.999  21.99
 5.05 Intr +  70949  70987   39  1  0   93   84    40 0.514   2.52
 5.06 Intr +  71565  71591   27  2  0  102  105    10 0.502   2.41
 5.07 Term +  76733  76879  147  1  0  104   55   197 0.813  15.90
 5.08 PlyA +  77236  77241    6                               1.05

 6.00 Prom +  78825  78864   40                              -6.16
 6.01 Init +  86196  86481  286  2  1   86   22   173 0.373   7.75
 6.02 Term +  89426  89439   14  0  2  148   42    11 0.346   0.86
 6.03 PlyA +  89852  89857    6                               1.05

 7.00 Prom +  95657  95696   40                              -4.66
 7.01 Init +  97355  97363    9  1  0   78  123     5 0.570   3.29
 7.02 Intr + 100002 100110  109  2  1   89   80   119 0.994  11.06
 7.03 Intr + 105086 105375  290  0  2   80  110   270 0.615  25.36
 7.04 Term + 106635 106742  108  2  0   88   48    20 0.322  -3.49
 7.05 PlyA + 106921 106926    6                               1.05

 8.06 PlyA - 109052 109047    6                               1.05
 8.05 Term - 113551 113450  102  1  0  130   35   107 0.963   7.88
 8.04 Intr - 119146 118878  269  2  2   75   57   329 0.992  25.75
 8.03 Intr - 120679 120571  109  1  1  131   80   107 0.911  14.06
 8.02 Intr - 123173 123102   72  2  0   74  119    50 0.987   6.30
 8.01 Init - 123810 123802    9  0  0   84  111    11 0.744   2.87
 8.00 Prom - 133669 133630   40                              -3.06

 9.05 PlyA - 133806 133801    6                               1.05
 9.04 Term - 135532 135431  102  1  0  140   36    84 0.897   6.68
 9.03 Intr - 150854 150586  269  0  2   73   96   468 0.705  43.35
 9.02 Intr - 158649 158547  103  0  1  102   71    65 0.754   5.95
 9.01 Init - 167775 167707   69  0  0   78   75   104 0.536   7.16
 9.00 Prom - 177601 177562   40                              -1.56

10.07 PlyA - 178078 178073    6                               1.05
10.06 Term - 183153 183085   69  0  0  109   35    22 0.158  -3.06
10.05 Intr - 191957 191526  432  2  0  117  111   391 0.704  38.14
10.04 Intr - 193583 193512   72  2  0   60   94    57 0.890   3.10
10.03 Intr - 196820 196693  128  0  2   79   94    33 0.925   3.40
10.02 Intr - 203981 203843  139  2  1   81   93    96 0.991   9.44
10.01 Intr - 204747 204655   93  0  0   80  111    17 0.611   3.36

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:63439515_63646236|GENSCAN_predicted_peptide_1|259_aa
MSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIV
KMAILPKVIYRFNAIPIKLPMTFFTQLEKTTLKFIWNQKRAHIAKSILSQKNKAGGITLP
DFKLYYKATVTKTAWHWYQNRDIDQWNRTEPSEITLHIYNYLIFDKPDKNKQWGKDSLFN
KWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLHVRPKTIKTQEENLGNTTQDIGMGKD
FMSKTPKQWQQKTKLTNGI

>gi568815587f:63439515_63646236|GENSCAN_predicted_CDS_1|780_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaatcaaa
gaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtg
aaaatggccatactgcccaaggtaatttacagattcaatgccatccccatcaagctacca
atgactttcttcacacaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
gcccacattgccaagtcaatcctaagccaaaagaacaaagccggaggcatcacactacct
gacttcaaactatactacaaggctacagtaaccaaaacagcatggcactggtaccaaaac
agagatatagatcaatggaacagaacagagccctcagaaataacgctacatatctacaac
tatctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaat
aaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttcctt
acaccttatacaaaaatcaattcaagatggattaaagacttacatgttagacctaaaacc
ataaaaacccaagaagaaaacctaggcaataccactcaggacataggcatgggcaaggac
ttcatgtctaaaacaccaaagcaatggcaacaaaagacaaaattgacaaatgggatctaa

>gi568815587f:63439515_63646236|GENSCAN_predicted_peptide_2|157_aa
MNWGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGSITSIFSNRAVVKY
SRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRY
GVPRSQQVEHALMEGAKAAGAVISAVVDSIKPKPITA

>gi568815587f:63439515_63646236|GENSCAN_predicted_CDS_2|474_bp
atgaattggggaaaaccaagacccagacctggagacctgattgagatttttcgaattggc
tatgagcactgggccatctatgtagaagatgattgcgtggtccatctggctcccccaagt
gaggagtttgaggtgggcagcattacttccatctttagcaatcgggccgtggtgaaatac
agtcgtctggaggatgtgctgcatggctgctcctggaaggtcaataacaagctagatggg
acgtacctgcccttgccggtggacaagatcatccagcgtacaaaaaagatggtcaacaag
atcgtgcagtacagcctgattgaagggaactgtgagcactttgtcaatggcctcagatat
ggcgtaccccggagccagcaggtagagcacgccctgatggaaggagcgaaggctgctgga
gcagttatttcagctgtagtggatagcataaagcccaaaccaataactgcctga

>gi568815587f:63439515_63646236|GENSCAN_predicted_peptide_3|157_aa
MEYYAAIKNDEFMSFVGTWMKLETIILSKLSQGQKTKHRMFSLIDTEIAFDKIQHPFMIK
NLNKISIKGTNLKAIKAIYDKPTANIIVIGEKLKAFPQITGKRRGCPLSPHLFDIVLEVL
ARAIRQEKEIKGIQISKKEVKLLLFADMIIDLENPKA

>gi568815587f:63439515_63646236|GENSCAN_predicted_CDS_3|474_bp
atggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatg
aagctggaaaccatcattctcagcaaactatcgcaaggacaaaaaaccaaacaccgcatg
ttctcactcatagacacagaaatagcatttgacaagatccagcatccctttatgattaaa
aacctcaacaaaatcagcataaaagggacaaacctcaaggcaataaaagccatctacgac
aaacccacagccaacattatagtgattggggaaaagttgaaagcattcccccagataact
ggaaaaagacgaggatgcccactttcaccacatttattcgacatagtgctagaagtccta
gccagagcaatcagacaagagaaagaaataaagggcatccaaatcagtaaaaaggaagtc
aaactgttgctgtttgctgatatgatcatagacctggaaaaccctaaagcctaa

>gi568815587f:63439515_63646236|GENSCAN_predicted_peptide_4|52_aa
MGLSPGAEGEYALRLPRIPPPLPKPASRTASTGPKDQPPALRRSAVPHSGNN

>gi568815587f:63439515_63646236|GENSCAN_predicted_CDS_4|159_bp
atgggcctgagcccgggcgccgagggggagtacgcgctccgcctccctaggattccccca
cccctccccaaacccgcctcgcgaaccgccagtaccgggcccaaggaccagccgcctgcg
ctcagacgttcagctgtgccccactcaggcaacaactga

>gi568815587f:63439515_63646236|GENSCAN_predicted_peptide_5|234_aa
MSPGEKLDPIPDSFILQPPVFHPVVPYVTTIFGGLHAGKMVMLQGVVPLDAHRFQVDFQC
GCSLCPRPDIAFHFNPRFHTTKPHVICNTLHGGRWQREARWPHLALRRGSSFLILFLFGN
EEVKVSVNGQHFLHFRYRLPLSHVDTLGIFGDILVEAVGFLNINPFVEGSREYPAGHPFL
LMSPRLVLLLFQEGGLKLALNGQGLGATSMNQQALEQLRELRISGSVQLYCVHS

>gi568815587f:63439515_63646236|GENSCAN_predicted_CDS_5|705_bp
atgtcacctggagaaaaactggacccaattcctgacagcttcattctgcaaccaccagtc
ttccacccggtggttccttatgtcacgacgatttttggaggcctgcatgcaggcaagatg
gtcatgctgcaaggagtggtccctctagatgcacacaggtttcaggtggacttccagtgt
ggctgcagcctgtgtccccggccagatatcgccttccacttcaaccctcgcttccatacc
accaagccccatgtcatctgcaacaccctgcatggtggacgctggcaaagggaggcccgg
tggccccacctggccctgcgaagaggctccagcttcctcatcctctttctcttcgggaat
gaggaagtgaaggtgagtgtgaatggacagcactttctccacttccgctaccggctccca
ctgtctcatgtggacacgctgggtatatttggtgacatcctggtagaggctgttggattc
ctgaacatcaatccatttgtggagggcagcagagagtacccagctggacatcctttcctg
ctgatgagccccaggctggtgctgctcctgttccaggagggagggctgaagctggcgctc
aatgggcaggggctgggggccaccagcatgaaccagcaggccctggagcagctgcgggag
ctccggatcagtggaagtgtccagctctactgtgtccactcctga

>gi568815587f:63439515_63646236|GENSCAN_predicted_peptide_6|99_aa
MAIRPKVIYRFNAIPIMLPMTFFTELEKTTLKFIRNQKGAHIAKSILSQKNKAGGIMLPD
FKLYYKTTVTKTAWYWYQNRDIDQWNRTEPSEIMPRKCK

>gi568815587f:63439515_63646236|GENSCAN_predicted_CDS_6|300_bp
atggccatacggcccaaggtaatttatagattcaatgccatccccatcatgctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatacggaaccaaaaaggagcc
cacatcgccaagtcaatcctaagccaaaagaacaaagccggaggcatcatgctacctgac
ttcaaactatactacaagactacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagatcaatggaacagaacagagccctcagaaataatgccacgtaagtgtaagtaa

>gi568815587f:63439515_63646236|GENSCAN_predicted_peptide_7|171_aa
MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPMRVPLIAGEYPGAGSSSVFSV
LSNSAEVKRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNC
EHFVTQLRYGKSRCKQVEKAKVEVGVATALGILVVAGCSFAIRRYQKKATA

>gi568815587f:63439515_63646236|GENSCAN_predicted_CDS_7|516_bp
atggcttcgccacaccaagagcccaaacctggagacctgattgagattttccgccttggc
tatgagcactgggccctgtatataggagatggctacgtgatccatctggctcctccaatg
agagtgcctctgattgcaggtgagtaccccggggctggctcctccagtgtcttctcagtc
ctgagcaacagtgcagaggtgaaacgggagcgcctggaagatgtggtgggaggctgttgc
tatcgggtcaacaacagcttggaccatgagtaccaaccacggcccgtggaggtgatcatc
agttctgcgaaggagatggttggtcagaagatgaagtacagtattgtgagcaggaactgt
gagcactttgtcacccagctgagatatggcaagtcccgctgtaaacaggtggaaaaggcc
aaggttgaagtcggtgtggccacggcgcttggaatcctggttgttgctggatgctctttt
gcgattaggagataccaaaaaaaagcgacagcctga

>gi568815587f:63439515_63646236|GENSCAN_predicted_peptide_8|186_aa
MALVVNKQSYEVGIITANFMDRRNDILARPRPRLGDLIEISRFGYAHWAIYVGDGYVVHL
APASEIAGAGAASVLSALTNKAIVKKELLSVVAGGDNYRVNNKHDDRYTPLPSNKIVKRA
EELVGQELPYSLTSDNCEHFVNHLRYGVSRSDQVTGAVTTVGVAAGLLAAASLVGILLAR
SKRERQ

>gi568815587f:63439515_63646236|GENSCAN_predicted_CDS_8|561_bp
atggctttggtagttaataagcaatcctatgaagtaggcataattactgccaacttcatg
gataggaggaatgatatactggccagaccaagaccgagacttggagacctgattgagatt
tctcgctttggctatgcacactgggccatctacgtgggagatggctatgtggtccatctg
gctccggcaagtgaaattgctggagctggtgcggccagtgtcctgtctgccctgaccaac
aaagccatagtgaagaaggaactgctgtctgtggtggctgggggagacaactacagggtc
aataacaagcacgatgacagatacacaccactgccttccaacaaaatcgtcaagcgggca
gaggagttggtggggcaggagttgccttattcgctgaccagtgacaactgcgagcacttc
gtgaaccatctgcgctatggcgtctcccgcagtgaccaggtcactggtgcagtcacgaca
gtaggtgtggcagcaggcctgctggctgccgcaagccttgtggggatcctgctggccaga
agcaagcgggaaaggcaataa

>gi568815587f:63439515_63646236|GENSCAN_predicted_peptide_9|180_aa
MTPSSILMCALCPRLSLGYPLPSPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEV
AGAGAASVMSALTDKAIVKKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQ
EVLYKLTSENCEHFVNELRYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ

>gi568815587f:63439515_63646236|GENSCAN_predicted_CDS_9|543_bp
atgacccctagctccatactgatgtgtgcgctgtgtccccgcctctcgttgggatacccg
ctgcccagcccagagcctaagcctggagacctgattgagatttttcgccctttctacaga
cactgggccatctatgttggcgatggatatgtggttcatctggcccctccaagtgaggtc
gcaggagctggtgcagccagtgtcatgtccgccctgactgacaaggccatcgtgaagaag
gaattgctgtatgatgtggccgggagtgacaagtaccaggtcaacaacaaacatgatgac
aagtactcgccgctgccctgcagcaaaatcatccagcgggcggaggagctggtggggcag
gaggtgctctacaagctgaccagtgagaactgcgagcactttgtgaatgagctgcgctat
ggagtcgcccgcagtgaccaggtcagagatgtcatcatcgctgcaagcgttgcaggaatg
ggcttggcagccatgagccttattggagtcatgttctcaagaaacaagcgacaaaagcaa
taa

>gi568815587f:63439515_63646236|GENSCAN_predicted_peptide_10|310_aa
TLMFLVRDWSFPYEYSYGLQGGMAFLDKRLQVKEHQHEEIQNVRNHIHSCFSDVTCFLLP
HPGLQVATSPDFDGKLKDIAGEFKEQLQALIPYVLNPSKLMEKEINGSKVTCRGLLEYFK
ATAEANNLAAAASAKDIYYNNMEEVCGGEKPYLSPDILEEKHCEFKQLALDHFKKTKKMG
GKDFSFRYQQELEEEIKELYENFCKHNGSKNVFSTFRTPAVLFTGIVALYIASGLTGFIG
LEVVAQLFNCMVGLLLIALLTWGYIRYSGQYRELGGAIDFGAAYVLEQIGFLHAPGEDRH
QWFQVYVIPL

>gi568815587f:63439515_63646236|GENSCAN_predicted_CDS_10|933_bp
acactgatgtttttggttagagattggagtttcccttatgaatatagctatggactccaa
ggaggaatggcatttttggataagcgtttacaggtgaaggaacatcaacatgaagaaatt
cagaatgttcgaaatcacattcactcatgtttctccgatgtcacctgctttctcttacca
catccaggactccaggtggccacaagccctgactttgatgggaaattaaaagatattgct
ggtgaattcaaagagcagttacaggcactgataccgtatgtattaaacccatctaagtta
atggaaaaggagatcaatggctcaaaggtcacctgtcggggactactggagtattttaag
gccactgctgaagccaacaacttagcagctgcagcctctgccaaggacatttattataac
aacatggaagaggtttgtgggggagagaaaccttatttgtctccagacattctagaggag
aagcactgtgaattcaaacaacttgctctggaccattttaagaagaccaagaagatgggt
gggaaggatttcagctttcgttaccagcaggagctggaggaggaaatcaaggaattatat
gagaacttctgcaagcacaatggtagcaagaacgtcttcagcaccttccgaacccctgca
gtgctgttcacgggcattgtagctttgtacatagcctcaggcctcactggcttcataggt
cttgaggttgtagcccagttgttcaactgtatggttggactactgttaatagcactcctc
acctggggctacatcaggtattctggtcaatatcgtgagctgggcggagctattgatttt
ggtgccgcatatgtgttggagcagataggtttcctccatgccccaggggaggacaggcac
cagtggttccaggtttatgtcatcccactttaa