GENSCAN 1.0	Date run:  5-Nov-116	Time: 23:13:26

Sequence gi568815597r:58476188_58677093 : 200906 bp : 39.88% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -   1378   1240  139  1  1   93  100   141 0.971  16.15
 1.00 Prom -   2008   1969   40                              -5.95

 2.00 Prom +   4449   4488   40                              -4.25
 2.01 Init +  14083  14509  427  0  1   81   58   277 0.513  20.51
 2.02 Term +  16416  17503 1088  1  2   46   37   452 0.750  27.17
 2.03 PlyA +  17572  17577    6                               1.05

 3.00 Prom +  18760  18799   40                              -3.65
 3.01 Init +  36296  36494  199  1  1   84   68   136 0.844  10.31
 3.02 Term +  41971  42335  365  2  2   43   42   132 0.131  -2.16
 3.03 PlyA +  42603  42608    6                               1.05

 4.08 PlyA -  43059  43054    6                               1.05
 4.07 Term -  46701  46639   63  0  0   85   39    95 0.721   1.21
 4.06 Intr -  51148  51074   75  1  0   59   98    48 0.574   1.69
 4.05 Intr -  58144  57971  174  1  0   48  100   184 0.504  14.81
 4.04 Intr -  71666  71548  119  0  2   33   91   110 0.002   5.06
 4.03 Intr -  72818  72672  147  0  0   59   70    69 0.000   1.49
 4.02 Intr -  74314  74230   85  1  1  -11   66    87 0.000  -4.93
 4.01 Init -  85719  85462  258  0  0   35  108   185 0.479  12.38
 4.00 Prom -  92923  92884   40                              -6.85

 5.02 PlyA -  94621  94616    6                               1.05
 5.01 Sngl - 100969  99998  972  1  0  111   43  1786 0.934 170.88
 5.00 Prom - 101527 101488   40                              -8.05

 6.02 PlyA - 101889 101884    6                               1.05
 6.01 Sngl - 103501 103418   84  1  0   93   48   250 0.996  10.18
 6.00 Prom - 106667 106628   40                              -3.65

 7.00 Prom + 108335 108374   40                              -5.75
 7.01 Init + 109920 109998   79  2  1   81   92    82 0.959   9.17
 7.02 Intr + 110262 110522  261  1  0   65   58   137 0.602   4.94
 7.03 Intr + 112800 112849   50  1  2   54   50    52 0.011  -4.52
 7.04 Term + 117164 117295  132  1  0  127   49    69 0.432   4.01
 7.05 PlyA + 118450 118455    6                               1.05

 8.04 PlyA - 120089 120084    6                               1.05
 8.03 Term - 122161 122003  159  1  0   78   55   102 0.097   2.86
 8.02 Intr - 125316 125172  145  2  1   76   17   125 0.044   3.56
 8.01 Init - 128021 127939   83  2  2   67   98    30 0.060   2.39
 8.00 Prom - 131161 131122   40                              -5.35

 9.07 PlyA - 131887 131882    6                               1.05
 9.06 Term - 135421 135300  122  2  2   77   54    75 0.187   0.66
 9.05 Intr - 143728 143575  154  1  1  125  107    26 0.581   6.92
 9.04 Intr - 144068 144002   67  1  1   57   93    60 0.633   1.39
 9.03 Intr - 147615 147459  157  1  1   41   85    95 0.280   2.65
 9.02 Intr - 148475 148311  165  0  0   35   44   125 0.264   1.81
 9.01 Init - 148604 148502  103  2  1   60   80   142 0.673   9.08
 9.00 Prom - 151916 151877   40                              -5.75

10.11 PlyA - 152033 152028    6                               1.05
10.10 Term - 155277 154863  415  2  1   50   48   395 0.241  25.45
10.09 Intr - 164632 164555   78  0  0   71   76    57 0.000   0.55
10.08 Intr - 180049 179894  156  0  0   97   83    77 0.452   6.30
10.07 Intr - 185324 185219  106  0  1  105   77    48 0.983   3.75
10.06 Intr - 189444 189312  133  0  1   85   97    46 0.984   4.50
10.05 Intr - 191039 190851  189  2  0   43   67   190 0.996  11.26
10.04 Intr - 191734 191660   75  1  0   78  100    40 0.884   2.99
10.03 Intr - 192495 192445   51  0  0   93   87    19 0.578   0.49
10.02 Intr - 197463 197386   78  0  0   78   78    58 0.854   2.63
10.01 Intr - 199393 199290  104  2  2   36  103    94 0.845   4.67

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  70723  70772   50  0  2   94   97    32 0.911   3.25
S.002 Intr +  74414  74622  209  0  2   91   67   135 0.975   9.57
S.003 Term +  74708  74902  195  1  0   50   42   183 0.991   6.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:58476188_58677093|GENSCAN_predicted_peptide_1|47_aa
MAGDGIILIGLDLSGSNIQADDGYESTPPKQNGYCVLGEMQPRGLRX

>gi568815597r:58476188_58677093|GENSCAN_predicted_CDS_1|141_bp
atggcaggggatggcattatcttgattggcttggacctatcaggatccaacattcaagct
gatgatgggtatgagtcaacaccacccaaacagaatggctactgcgtgttaggagagatg
caaccacggggcttacgaann

>gi568815597r:58476188_58677093|GENSCAN_predicted_peptide_2|504_aa
MAQELRDECTSLSSRFDQLEEKVSVMEDEINEMKQEEKVREKRIKRNEQSLQEIWDYVKR
PNLHLIGVPESDRENGTKLENTLQDIIQENFPNLARQANIQIQEIQRMPQRYSSRRATPR
HIIVRFTKVEMKEKMLRAAREKEIQTTIREYYKHLYTNKLENLEEMDKFLDTYSLPRLNQ
EEVESLKRPITGSEIGAIINSLPTKKSPGPDGFTAEFYQRYKKELVPFLLKLFQSTEKER
ILPNSFYEASIILIPKPGRDTTKKENFRPISLMNINAKILNKILANQIQQHIEKLIHHDQ
VGFIPGMQGWFNIRKSINVIQHINRTNEKNHMIISIDAEKAFDKIQQPFMLKTLNKLGID
GTYLKIVRAIYDKLTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEK
EIKGIQLGKEQVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLY
TNNRQTESQIMSELPFTIASKRIK

>gi568815597r:58476188_58677093|GENSCAN_predicted_CDS_2|1515_bp
atggcacaagaactacgtgacgaatgcacaagcctcagtagccgattcgatcaactggaa
gaaaaggtatcagtgatggaagatgaaattaatgaaatgaagcaagaagagaaggttaga
gaaaaaagaataaaaagaaatgaacaaagcctccaagaaatatgggactatgtgaaaaga
ccaaatctacatctgattggtgtacctgaaagtgacagggagaatggaaccaagttggaa
aacactctgcaggatattatccaagagaacttccccaatctagcaaggcaggccaacatt
caaattcaggaaatacagagaatgccacaaagatactcctcgagaagagcaactccaaga
cacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagctaga
gagaaagaaatacaaactaccatcagagaatactataaacacctctacacaaataaacta
gaaaatctggaagaaatggataaattcctggacacatacagtctcccaagactaaaccag
gaagaagttgaatctctgaagagaccaataacaggatctgaaattggggcaataattaat
agcttaccaaccaaaaaaagtccaggaccagatggattcacagccgaattctaccagagg
tacaagaaggagctggtaccattccttctgaaactattccaatcaacagaaaaagagaga
atcctccctaactcattttatgaggccagcatcatcctgataccaaagcctggcagagac
acaacaaaaaaagagaattttagaccaatatccctgatgaacatcaatgcaaaaatcctc
aataaaatactggcaaaccaaatccagcagcacatcgaaaagcttatccaccatgatcaa
gtgggcttcatccctgggatgcaaggctggttcaacatacgcaaatcaataaacgtaatc
cagcatataaacagaaccaacgagaaaaaccacatgattatctcaatagatgcagaaaag
gcctttgacaaaattcaacagcccttcatgctaaaaactctcaataaattaggtattgat
gggacgtatctcaaaatagtaagagctatttatgacaaactcacagccaatatcatactg
aatgggcaaaaattggaagcattccctttgaaaactggcacaagacagggatgccctctc
tcaccactcctattcaacatagtgttggaagttctggccagggcaatcaggcaagagaaa
gaaataaagggtattcaattaggaaaagagcaagtcaaattgtccctgtttgcagatgac
atgattgtatatctagaaaaccccatcgtctcagcccaaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattcttatac
accaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatag

>gi568815597r:58476188_58677093|GENSCAN_predicted_peptide_3|187_aa
MWKQPECSSANEQIKKMWYKHTSKYYLALKKEILSYATIRINLEDIKLSEISQSQMDKYE
TIPLTCAWATKVKFCQKEKRRGERGEGRGERGEGRGERGEGRGERRGEEKRREEKRREEK
RREEKRREEKRREGKRREGKKRKEKRKENIIIAYWICFLLVAGWRMEWRGVGLESMKAIM
SLLQKFR

>gi568815597r:58476188_58677093|GENSCAN_predicted_CDS_3|564_bp
atgtggaaacaacctgaatgttcatcagcgaatgaacagattaagaaaatgtggtataaa
catacatcaaaatattatttggccttaaaaaaggaaatcctgtcatatgcaacaatacgg
ataaaccttgaggacattaagctaagtgaaataagccagtcacaaatggacaaatacgag
acgattccacttacatgtgcctgggcaacaaaagtgaaattctgtcagaaagaaaagagg
agaggggagaggggagaggggagaggggagaggggagaggggagaggggagaggggagag
gggagaggagagaggagaggagaagagaagagaagagaagagaagagaagagaagagaag
agaagagaagagaagagaagagaagagaagagaagggaagggaagagaagagaagggaag
aaaagaaaagaaaaaagaaaagagaatatcatcatagcttactggatctgtttcttactt
gtggcagggtggagaatggaatggaggggagtaggactggagtcaatgaaagctatcatg
agcctgctacagaagtttaggtaa

>gi568815597r:58476188_58677093|GENSCAN_predicted_peptide_4|306_aa
MSVMRKYRALREHPARRTDVSWSGSRNQFREDLLEKVLLKLRPEDKQELVMYKKRKGKCI
AEATRCAITDYISKDYSAMNVSYSTQCLAQDSGPRVDFSDGDLGNWPSGGQCHLEPEGRQ
RGMFHGRPRGCIIFYGHGECTGVRGTSITKKFREGSPLEGRADVQKELDQLEIPENITPI
YFTNDIMLTRQDEQEVASMLETLWMEEFKNDMLTEKDARYLAVKEVLCHLIECNKDVPGI
SQINWVIHVVDSPIINAFVLPYMFNRPYSRKLEAEADKIGLLLAAKSTQCEDKDGDIYDD
PLPLNE

>gi568815597r:58476188_58677093|GENSCAN_predicted_CDS_4|921_bp
atgagtgttatgaggaaatacagggcgttacgagaacatccagcaaggagaactgacgta
agctggagtggaagtaggaatcagtttagggaagatctgctcgagaaagttctgcttaag
ctgagacctgaggacaaacaggagcttgtcatgtataagaagaggaaaggaaaatgtatt
gcggaggcaactagatgtgcaataactgactatattagcaaggactattcagctatgaat
gttagctattcaactcaatgtctggcacaagatagtggcccccgtgtggatttcagtgat
ggcgacctgggaaactggcccagtggagggcaatgccatttagagcccgaaggcagacag
aggggaatgttccatgggaggcccagaggatgcatcatattctatggccatggggaatgc
actggcgtgaggggcactagcatcactaagaagttcagagaaggctctcctctggaggga
agggctgacgtccaaaaggagctggatcaactggaaattccagagaacatcacacccatc
tatttcaccaatgacattatgctaaccaggcaagatgagcaagaggtggctagcatgctg
gaaactttgtggatggaagaatttaaaaatgatatgctaactgagaaagatgcccgatac
ctggctgttaaagaagtgctttgtcatctaattgaatgcaataaagatgttccagggatc
tctcagatcaattgggttattcatgtggttgattccccaattattaatgccttcgtgctt
ccatatatgtttaatagaccatacagcagaaaattggaggccgaagctgacaaaattgga
ctactgcttgctgcaaagtctactcagtgtgaagataaggatggagacatttatgatgat
ccacttccacttaatgaatag

>gi568815597r:58476188_58677093|GENSCAN_predicted_peptide_5|323_aa
MARGPGLAPPPLRLPLLLLVLAAVTGHTAAQDNCTCPTNKMTVCSPDGPGGRCQCRALGS
GMAVDCSTLTSKCLLLKARMSAPKNARTLVRPSEHALVDNDGLYDPDCDPEGRFKARQCN
QTSVCWCVNSVGVRRTDKGDLSLRCDELVRTHHILIDLRHRPTAGAFNHSDLDAELRRLF
RERYRLHPKFVAAVHYEQPTIQIELRQNTSQKAAGDVDIGDAAYYFERDIKGESLFQGRG
GLDLRVRGEPLQVERTLIYYLDEIPPKFSMKRLTAGLIAVIVVVVVALVAGMAVLVITNR
RKSGKYKKVEIKELGELRKEPSL

>gi568815597r:58476188_58677093|GENSCAN_predicted_CDS_5|972_bp
atggctcggggccccggcctcgcgccgccaccgctgcggctgccgctgctgctgctggtg
ctggcggcggtgaccggccacacggccgcgcaggacaactgcacgtgtcccaccaacaag
atgaccgtgtgcagccccgacggccccggcggccgctgccagtgccgcgcgctgggctcg
ggcatggcggtcgactgctccacgctgacctccaagtgtctgctgctcaaggcgcgcatg
agcgcccccaagaacgcccgcacgctggtgcggccgagtgagcacgcgctcgtggacaac
gatggcctctacgaccccgactgcgaccccgagggccgcttcaaggcgcgccagtgcaac
cagacgtcggtgtgctggtgcgtgaactcggtgggcgtgcgccgcacggacaagggcgac
ctgagcctacgctgcgatgagctggtgcgcacccaccacatcctcattgacctgcgccac
cgccccaccgccggcgccttcaaccactcagacctggacgccgagctgaggcggctcttc
cgcgagcgctatcggctgcaccccaagttcgtggcggccgtgcactacgagcagcccacc
atccagatcgagctgcggcagaacacgtctcagaaggccgccggtgacgtggatatcggc
gatgccgcctactacttcgagagggacatcaagggcgagtctctattccagggccgcggc
ggcctggacttgcgcgtgcgcggagaacccctgcaggtggagcgcacgctcatctattac
ctggacgagattcccccgaagttctccatgaagcgcctcaccgccggcctcatcgccgtc
atcgtggtggtcgtggtggccctcgtcgccggcatggccgtcctggtgatcaccaaccgg
agaaagtcggggaagtacaagaaggtggagatcaaggaactgggggagttgagaaaggaa
ccgagcttgtag

>gi568815597r:58476188_58677093|GENSCAN_predicted_peptide_6|27_aa
MDCRRGWQEHDDDDDDDDDDDDNDDDK

>gi568815597r:58476188_58677093|GENSCAN_predicted_CDS_6|84_bp
atggactgccggagaggttggcaggagcacgatgatgatgatgatgatgatgacgacgac
gacgacaacgatgatgacaaatga

>gi568815597r:58476188_58677093|GENSCAN_predicted_peptide_7|173_aa
MASQENPSKDKALILSDNLLPLDGMDNISSHIGPGLSVLRGSTALLLSAVMSHKTHTRDG
SRGEEEWERGKVQKSRKNEAGRKEETSLFSNSGMCGPKTKGKKVLVVPLTLVGLGKAANA
LTVLREASSQKYLLRTYYVLVSVEVLEKKAVNNRDACPLGAYIPVMTGEFDLG

>gi568815597r:58476188_58677093|GENSCAN_predicted_CDS_7|522_bp
atggcctctcaagagaatccaagtaaggataaggctttgattttatccgacaacttacta
cctttagatggtatggataacatctccagtcacatcggtccagggctgagtgtgctgagg
ggctcaactgcactcctactctcagccgtcatgagtcacaagactcacaccagggatgga
agtagaggcgaggaggagtgggagagaggaaaagttcagaagtctaggaagaatgaggca
ggcaggaaagaggagacttcattgttctctaattctgggatgtgtgggcccaagacaaag
ggcaagaaagtccttgttgttcctctgaccttagtgggattaggtaaagcagccaatgct
ctaactgttctcagggaagcctcaagtcagaaatacttattaagaacctactatgtgcta
gtatcagtcgaggtgctagagaagaaagcagtgaacaacagagatgcttgcccccttgga
gcttatatcccagtgatgactggggaatttgacttgggatag

>gi568815597r:58476188_58677093|GENSCAN_predicted_peptide_8|128_aa
MAELVKIHQPSIHCLQETHLTHKDSNLRARKNNLKFHMEPKERPDIAKARLSKRKKSGGI
TLLDFKLYYKAVVTKTGAGSQIGKLPLQQLSARIKNPPKPANSHNLETEIPRKPPKSRSA
LWRPDFRP

>gi568815597r:58476188_58677093|GENSCAN_predicted_CDS_8|387_bp
atggcagaattggtaaaaatccaccaaccaagtatccactgtcttcaagagactcaccta
acacataaggactcaaacttaagagccaggaaaaacaatctgaaatttcatatggaacca
aaagaaagacccgacatagccaaagcaagactgagcaaaaggaaaaaatctggaggcatc
acattgctggacttcaagctatactacaaggctgtggttaccaaaacaggagctggcagc
caaattgggaagctgcccctgcagcagctctctgccaggatcaaaaacccaccaaaacca
gcaaacagccacaacctagaaactgaaatacccaggaagccaccaaaatcaagaagtgcc
ttgtggcggccagacttccgtccatga

>gi568815597r:58476188_58677093|GENSCAN_predicted_peptide_9|255_aa
MKLRTLAVSATALKVARLEFVPFDVRMCSEFLSSGVKLQTFAVSVTALNALRLELFVPPG
GLMVSLASGVKLQIFTVSVTAHKSSVDPKTLGWSMGLGAVEQGAALIGEAWAAQEPMEGV
GGSGMAGCRSRALPRGKAAKAWREVDSESWRFWCKVANSVPTYKVLFHPALECVPVLTTL
ALVPPAACTIPTAPLILCQAPEILGFPSSPVSTSADNSGFMGSNESLDWPPSALCPPVFL
TLLTAASTQLIKPKA

>gi568815597r:58476188_58677093|GENSCAN_predicted_CDS_9|768_bp
atgaagctgcggaccctcgcggtgagtgctacagctcttaaggtggcgcgtctggagttt
gttccttttgatgttcggatgtgttcggagtttctttcttccggagtgaagctgcagacc
ttcgcggtgagtgttacagctcttaatgcactgcgtctggagttgttcgttcctcccggt
gggctcatggtctcgctggcttcaggagtgaagctgcagatcttcacggtgagtgttaca
gctcataaaagcagtgtggacccaaagacccttgggtggtcgatgggactgggcgccgtg
gagcagggggcggcgctcatcggggaggcttgggccgcacaggagcccatggagggggtg
ggaggctcaggcatggcgggctgcaggtctcgagccctgccccgcggaaaggcagctaag
gcctggagagaagtggattctgaaagctggcggttctggtgtaaagttgctaatagtgtg
cccacttataaggttctcttccacccagcactggagtgtgtccctgtcctcaccacttta
gccctggtccctcctgcagcatgcacaattcccactgctcctttgattctgtgccaggca
cctgagattcttggcttcccttcttctcctgtctccacttcagctgataactcaggcttc
atgggttcaaatgaaagtcttgactggcccccatctgccctttgtcctccagtctttctc
accttattgacagcagcatccacacagctgatcaagccaaaagcctga

>gi568815597r:58476188_58677093|GENSCAN_predicted_peptide_10|461_aa
XQAVYNRPQTVDKVRIRDRKDAVEAYQLAQRLQSMRTRRRRVRDPWGNWCDAKDLEGQTF
EEPFQVKVASEALLIMDLHAHVSMAEVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCE
MDPVSQTQASETLAVRGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMI
VSPYNRNNPLPYSQITCLVISEEISPDGSYRLPYKFEVQQMLEEPQWGLVFEKTRWIIEK
YRLSHRSGVEVCDMQTVSTVRTSAALNPTEETVASTCQPEQVSSALPSSHFSSWVLMRLL
QVIATCPKAPVAQMEGSMPSEYRRAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELG
KKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEK
LDSVIEFSIPDSLLIRRITGRLITPRVAVPTTRSSTLQKSP

>gi568815597r:58476188_58677093|GENSCAN_predicted_CDS_10|1386_bp
naacaggctgtgtataataggccacaaacagttgacaaagtacgaatcagagacagaaaa
gatgcagtagaagcataccaacttgcccagcgtctgcagtctatgcgtacaaggagacgt
agggtccgagacccatggggaaactggtgtgatgcaaaggacttagaaggacaaacgttt
gaggagccatttcaggtgaaagtggcttcagaagcacttttaataatggatttgcatgct
catgtttctatggcagaagtgattggtctgttaggaggaagatactcagaagttgataaa
gtagttgaagtctgtgcagcagaaccatgtaacagtctgagtacaggactacagtgtgag
atggatcctgtatcacaaacacaggcctcagaaaccttggctgttagaggcttcagtgtt
attggatggtatcattctcatcctgcttttgatcctaatccttccttacgagatattgac
acacaagctaaataccagagttacttctccagaggaggtgcaaagttcattgggatgatt
gttagtccctataatcgaaataatcccttaccatattctcagattacctgcctggttata
agtgaggaaattagcccagatggctcttatcgcttaccttacaaatttgaagtacagcag
atgttagaagaacctcagtggggattagtatttgaaaagacaagatggataatagaaaaa
tacaggctctcccataggagtggggttgaggtctgtgacatgcagactgtaagcacagtc
agaacctctgcagctctcaacccaacagaggagactgtggcttcaacatgccaacctgag
caggtctcctctgcattaccttcctcccatttctcttcctgggtcctgatgaggctgcta
caggtaatagctacatgccctaaagccccagttgctcagatggaaggctccatgcccagt
gagtacaggagggccggtaaaggcacccaggcacccagattggctgaaaacttctgtgtc
tgccatttagctactggggacatgctgagggccatggtggcttctggctcagagctagga
aaaaagctgaaggcaactatggatgctgggaaactggtgagtgatgaaatggtagtggag
ctcattgagaagaatttggagacccccttgtgcaaaaatggttttcttctggatggcttc
cctcggactgtgaggcaggcagaaatgctcgatgacctcatggagaagaggaaagagaag
cttgattctgtgattgaattcagcatcccagactctctgctgatccgaagaatcacagga
aggctgatcaccccaagagtggccgttcctaccacgaggagttcaaccctccaaaagagc
ccatga