GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:10:27

Sequence gi568815593f:151153217_151367448 : 214232 bp : 44.77% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3170   3272  103  1  1   86   71    75 0.378   5.35
 1.02 Intr +  20527  20750  224  2  2  119   53   118 0.604   9.25
 1.03 Intr +  21679  21886  208  0  1   34   49   160 0.353   5.35
 1.04 Term +  27096  27211  116  1  2   68   47    61 0.111  -1.27
 1.05 PlyA +  28544  28549    6                               1.05

 2.15 PlyA -  29768  29763    6                              -1.95
 2.14 Term -  30398  30221  178  1  1   83   46   160 0.616   8.46
 2.13 Intr -  31225  31128   98  1  2   62   65   110 0.977   4.91
 2.12 Intr -  32325  32206  120  0  0   97   14   173 0.855  11.49
 2.11 Intr -  32908  32807  102  1  0   77   96    41 0.906   4.17
 2.10 Intr -  34243  34170   74  2  2   83   94    24 0.833   1.63
 2.09 Intr -  45868  45781   88  1  1   87  116    85 0.988  10.74
 2.08 Intr -  48472  48366  107  2  2   98  111    54 0.996   8.63
 2.07 Intr -  52259  52184   76  2  1   92  109    54 0.497   6.99
 2.06 Intr -  62470  62412   59  2  2  101   42    34 0.007  -1.30
 2.05 Intr -  67521  67400  122  2  2   52   80    84 0.027   4.14
 2.04 Intr -  70025  69935   91  0  1  110   77   -15 0.040  -1.35
 2.03 Intr -  71004  70707  298  0  1   64   98   164 0.050  11.45
 2.02 Intr -  81611  81524   88  1  1   51   68    63 0.006   0.57
 2.01 Init -  93287  93121  167  2  2   51  -27   203 0.006   4.21
 2.00 Prom -  95159  95120   40                              -7.16

 3.00 Prom +  98710  98749   40                              -6.56
 3.01 Init + 100001 100081   81  1  0   47  113   204 0.832  17.77
 3.02 Intr + 105781 105861   81  0  0   -8   89   121 0.095   2.43
 3.03 Intr + 106539 106700  162  2  0   77  105   103 0.911  11.07
 3.04 Intr + 113515 113697  183  0  0  110  100   110 0.999  14.38
 3.05 Term + 114080 114235  156  1  0   95   38   164 0.997  10.03
 3.06 PlyA + 116003 116008    6                               1.05

 4.26 PlyA - 119660 119655    6                               1.05
 4.25 Term - 124445 124177  269  0  2  111   32   283 0.903  20.66
 4.24 Intr - 127967 127798  170  1  2   91   76   201 0.998  18.79
 4.23 Intr - 130994 130828  167  2  2  122   84   127 0.980  14.46
 4.22 Intr - 131495 131397   99  2  0   83   95    73 0.993   7.81
 4.21 Intr - 134248 134030  219  1  0   47   58   297 0.976  21.10
 4.20 Intr - 135254 135170   85  1  1  155  103     2 0.997   8.22
 4.19 Intr - 140243 140148   96  1  0  111   62    81 0.946   6.92
 4.18 Intr - 143052 142964   89  0  2  144   55   100 0.998  11.07
 4.17 Intr - 145467 145377   91  2  1  123   91    33 0.907   7.10
 4.16 Intr - 150138 150011  128  0  2   44   97    61 0.366   2.08
 4.15 Intr - 150931 150893   39  1  0   95   86    11 0.188   0.02
 4.14 Intr - 156445 156261  185  2  2   49   43   193 0.285  10.41
 4.13 Intr - 156950 156888   63  0  0   50   61    87 0.039   0.89
 4.12 Intr - 157154 157132   23  1  2   38  117    19 0.032  -3.01
 4.11 Intr - 163872 163605  268  1  1  118   97   468 0.949  47.29
 4.10 Intr - 168999 168830  170  2  2   68   84   274 0.960  24.59
 4.09 Intr - 172236 172070  167  0  2   71   30   172 0.352   8.46
 4.08 Intr - 180106 180008   99  1  0  114   79    18 0.847   3.81
 4.07 Intr - 182331 182113  219  0  0  126  109   344 0.704  38.80
 4.06 Intr - 185928 185844   85  2  1  123   80    17 0.001   4.22
 4.05 Intr - 189767 189672   96  1  0   76   86    56 0.469   3.32
 4.04 Intr - 190382 190294   89  2  2  129   78    87 0.638  10.57
 4.03 Intr - 191051 190961   91  1  1  110   99    99 0.990  13.20
 4.02 Intr - 194040 194011   30  2  0   97   90    17 0.507   0.05
 4.01 Init - 194244 194081  164  0  2   75   92   165 0.685  14.81
 4.00 Prom - 198895 198856   40                              -4.66

 5.02 PlyA - 200735 200730    6                               1.05
 5.01 Sngl - 207724 207563  162  1  0   74   32   178 0.839   5.39
 5.00 Prom - 208470 208431   40                              -5.86

 6.02 PlyA - 209818 209813    6                               1.05
 6.01 Term - 213442 213240  203  2  2   75   47   250 0.382  17.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  59548  59673  126  0  0   50   70   141 0.847   8.66
S.002 Init + 105775 105861   87  0  0   53   89   107 0.885   7.94
S.003 Init - 156948 156888   61  0  1   57   61    80 0.923   3.61
S.004 Term + 186802 187152  351  0  0  -37   41   509 0.950  28.19


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:151153217_151367448|GENSCAN_predicted_peptide_1|216_aa
ASALGVAQGLPARRSGSTGAETGAVIHFTMKGYAGEIPEHGRTPKAQKMRGSKAAGPSEV
QLSGAPCQRKPKADGSQKPMQMKTPMEAIASATPSPPPDPGVGKARFPKEYRAIPIACPS
RPYHLSFRIKHFSQCSQLLLVNSSGADTGEYSCWAPHCQDGACAECLAYQRKTFIFFTEI
NGASYLTLVCESEMHLGQLMDSPFLSPTVGPTTLHQ

>gi568815593f:151153217_151367448|GENSCAN_predicted_CDS_1|651_bp
gccagtgccctcggcgtggctcagggcctgcctgctaggaggtcagggtccacaggggct
gaaactggggcggtcattcacttcaccatgaagggctacgcaggtgaaatcccggagcat
ggcagaactccaaaggctcagaaaatgaggggctccaaagcagctggccccagtgaggtg
cagctttcaggagccccctgccagagaaaacccaaagcagacgggagccagaagcccatg
cagatgaagacccccatggaggctatagcctctgcaaccccaagccccccacctgaccca
ggtgtagggaaggcccgattcccgaaggagtatcgggccatccccatcgcctgcccgtcc
cgcccctaccatctgtctttcagaatcaagcacttcagccagtgcagccagctgctgctg
gtgaactcctctggcgcagacaccggggaatatagctgttgggctccgcactgtcaggac
ggcgcatgcgctgaatgcctggcctaccagagaaagactttcatcttcttcacagagata
aatggtgcctcttacctgaccctggtgtgtgagtcagagatgcacctggggcagctgatg
gacagtccgtttttatcccctaccgttgggccaaccactctacatcagtga

>gi568815593f:151153217_151367448|GENSCAN_predicted_peptide_2|555_aa
MPSAIKVQGLDWVHLSRIKPAIPEDPDQEPEVSISHYTCEPVEALKFLFKRQPKDDAFGI
LTHTLMNYSSRYLTASAQRFLAILHKDSGHLPLVAAPLALRATLRPRSSGIYGGRPPQLR
LKTALPGSVSGSRRQPQPAGAERAAGPGSQAPLGAPELGSGVREPPEEDGLQTQQAEQLQ
TPEKGALELGQGPGDNSQVSCSETSCPLGSDEPRRVPGMMSELSIPEGCGYSSIVPSRTS
EKGLSTAAKAGPQVTGNPALSFTTTLTLSAEEQGMKRQEPEPEQPPRPEPHELGPLNGDT
AITVQLCASEEAERHQKDITRILQQHEEEKKKWAQQVEKERELELRDRLDEQQRVLEGKN
EEALQVLRASYEQEKEALTHSFREASSTQQETIDRLTSQLEAFQAKMKRVEESILSRNYK
KHIQDYGSPSQFWEQELESLHFVIEMKNERIHELDRRLILMETVKEKNLILEEKITTLQQ
ENEDLHVRSRNQVVLSRQLSEDLLLTREALEKEVQLRRQLQQEKEELLYRVLGANASPAF
PLAPVTPTEVSFLAT

>gi568815593f:151153217_151367448|GENSCAN_predicted_CDS_2|1668_bp
atgccttctgccatcaaagtacaaggattagattgggtacatctttcaaggatcaagcca
gcaataccagaagatccggaccaggaacctgaagtttccatcagccactacacctgtgaa
cctgtggaagccctgaagttcctgtttaaaagacagccaaaagatgatgcctttgggatc
ctcacccacactctcatgaactattccagtagatacttgactgcttcagcacagcgcttc
ctcgccattctccacaaggattctggtcacctgcctctggtggcggcgccgctggccctg
cgggctacactgaggccccgctcttcgggtatttacggcgggcggccgccccagctcagg
ctcaagacagcgcttccaggttcagtttcagggtctcgccggcagccccagccggcgggc
gcggagcgggcagcggggcccggatcgcaggctcctctgggggccccggagttgggaagc
ggcgtccgggagcccccggaggaggatgggctgcagacacagcaggctgagcagctgcaa
acccccgaaaaaggggccttggagctgggtcagggcccaggggacaattctcaggtttct
tgcagtgagaccagctgccccttggggtctgacgagcccagaagagtaccaggaatgatg
tctgaactctccattcccgaaggctgtggctatagctccatagttccaagcaggacctct
gagaaggggctcagcacagctgccaaagctgggcctcaggtgacaggcaatcccgccctc
tcttttacaaccacccttacactgtctgctgaagaacaggggatgaagcgccaagaacca
gaaccagaacagccacccagaccagagccccatgaattaggtcccctcaatggggacaca
gctataactgtccagctctgtgcatcagaggaggctgagcggcaccagaaggatataacc
agaattctccagcaacatgaggaggaaaagaagaaatgggcacaacaggtggagaaggaa
agggagctagagcttcgagacagactggatgagcagcaaagggtcctggaaggaaagaat
gaagaggccctgcaagtcctccgggcctcatatgaacaggagaaagaagcgcttacccac
tctttccgggaggccagttctacccagcaggagaccatagacagactgacctcacagctg
gaggctttccaggccaaaatgaagagggtggaggagtccattctgagccgaaactataag
aaacatatccaggattatgggagccccagccagttctgggagcaggagctggagagctta
cactttgtcatcgagatgaagaatgagcgtattcatgagctggacaggcggctgatcctc
atggaaacagtgaaagagaaaaatctgatattggaggaaaaaattacgaccctgcaacag
gaaaatgaggacctccatgtccgaagccgcaaccaggtggtcctgtcaaggcagctgtca
gaagacctgcttctcacgcgtgaggccctggagaaggaggtgcagctgcggcgacagctc
cagcaggagaaggaggagctgttgtaccgggtccttggggccaatgcctcgcctgccttc
cctctggcccctgtcactcccactgaggtctctttcctcgccacatag

>gi568815593f:151153217_151367448|GENSCAN_predicted_peptide_3|220_aa
MQSLMQAPLLIALGLLLAAPAQAHLKKSHADVVVVESGDLGDVEEEQEQLSTGVPSQLSS
FSWDNCDEGKDPAVIRSLTLEPDPIIVPGNVTLSVMGSTSVPLSSPLKVDLVLEKEVAGL
WIKIPCTDYIGSCTFEHFCDVLDMLIPTGEPCPEPLRTYGLPCHCPFKEGTYSLPKSEFV
VPDLELPSWLTTGNYRIESVLSSSGKRLGCIKIAASLKGI

>gi568815593f:151153217_151367448|GENSCAN_predicted_CDS_3|663_bp
atgcagtccctgatgcaggctcccctcctgatcgccctgggcttgcttctcgcggcccct
gcgcaagcccacctgaaaaagtcacatgcagatgtagtggtggtggaatcaggagacctg
ggggatgtggaggaggaacaggagcagctcagcacaggggtgccatcccagctcagtagc
ttttcctgggataactgtgatgaagggaaggaccctgcggtgatcagaagcctgactctg
gagcctgaccccatcatcgttcctggaaatgtgaccctcagtgtcatgggcagcaccagt
gtccccctgagttctcctctgaaggtggatttagttttggagaaggaggtggctggcctc
tggatcaagatcccatgcacagactacattggcagctgtacctttgaacacttctgtgat
gtgcttgacatgttaattcctactggggagccctgcccagagcccctgcgtacctatggg
cttccttgccactgtcccttcaaagaaggaacctactcactgcccaagagcgaattcgtt
gtgcctgacctggagctgcccagttggctcaccaccgggaactaccgcatagagagcgtc
ctgagcagcagtgggaagcgtctgggctgcatcaagatcgctgcctctctaaagggcata
taa

>gi568815593f:151153217_151367448|GENSCAN_predicted_peptide_4|1066_aa
MSVTKSTEGPQGAVAIKLDLMSPPESAKKLENKDSTFLDESPSESAGLKKTKGITLKLAL
AKTLRVFQALIHLVKGNMGTGILGLPLAVKNAGILMGPLSLLVMGFIACHCMHILVKCAQ
RFCKRLNKPFMDYGDTVMHGLEANPNAWLQNHAHWGRHIVSFFLIITQLGFCCVYIVFLA
DNLKQVVEAVNSTTNNCYSNETVILTPTMDSRLYMLSFLPFLVLLVLIRNLRILTIFSML
ANISMLVSLVIIIQYITQEIPDPSRLPLVASWKTYPLFFGTAIFSFESIGVVLPLENKMK
NARHFPAILSLGMSIVTSLYIGMAALGYLRFGDDIKASISLNLPNCWLYQSVKLLYIAGI
LCTYALQFYVPAEIIIPFAISRVSTRWALPLDLSIRLVMVCLTCLLAILIPRLDLVISLV
GSVSGTALALIIPPLLEVTTFYSEGMSPLTIFKDALISILGFVGFVVGTYQALDELLKSE
DSHPFSNSTTFVRSEAADLPGMKLQTFAESVTAHKGSVDPKNSGAQLASPSGSHTGDAGG
ATCQSCAVGPHSSALGWSMGLGAVEQGAALIGEALAAQEPMKRPLQIVNSMRTEIVMSLL
GRDYNSELNSLDNGPQSPSESSSSITSENVHPAGEAGLSMMQTLIHLLKCNIGTGLLGLP
LAIKNAGLLVGPVSLLAIGVLTVHCMVILLNCAQHLSQRLQKTFVNYGEATMYGLETCPN
TWLRAHAVWGRYTVSFLLVITQLGFCSVYFMFMADNLQQMVEKAHVTSNICQPREILTLT
PILDIRFYMLIILPFLILLVFIQNLKVLSVFSTLANITTLGSMALIFEYIMEGIPYPSNL
PLMANWKTFLLFFGTAIFTFEGVGMVLPLKNQMKHPQQFSFVLYLGMSIVIILYILLGTL
GYMKFGSDTQASITLNLPNCWLYQSVKLMYSIGIFFTYALQFHVPAEIIIPFAISQVSES
WALFVDLSVRSALVCLTCVSAILIPRLDLVISLVGSVSSSALALIIPALLEIVIFYSEDM
SCVTIAKDIMISIVGLLGCIFGTYQALYELPQPISHSMANSTGVHA

>gi568815593f:151153217_151367448|GENSCAN_predicted_CDS_4|3201_bp
atgtctgtgacaaaaagtactgagggtccccagggagccgttgccatcaaattggacctt
atgtcgcctcctgaaagtgccaagaagttggagaacaaggactctacattcttggatgaa
agtccttcagagtcagcaggcttgaagaagaccaagggcataaccctgaagcttgcattg
gcaaaaaccctgagagtgttccaggccttgattcacctggtgaaaggcaacatgggcaca
gggatcctgggactacccctcgctgtgaagaacgcgggcatcctgatgggcccactcagt
ctgctggtgatgggcttcattgcctgccactgtatgcacatcctggtcaagtgtgcccag
cgcttctgtaagaggcttaacaagccctttatggactatggggacacggtgatgcatgga
ctagaagccaaccccaacgcctggctccagaatcacgctcactggggaaggcatatcgtg
agcttcttccttattatcacccaacttggcttctgctgtgtgtacattgtgtttttggct
gataatttaaaacaggtagtggaagctgttaatagcacaaccaacaactgctattccaat
gagacggtgattctgacccccaccatggactcgcgactctacatgctctccttcctgccc
ttcctggtgctgctggtcctcatccggaacctcaggatcttgaccatcttctccatgctg
gccaacatcagcatgctggtcagcttggtcatcatcatacagtacattacccaggaaatc
ccagaccccagccggttgccactggtagcaagctggaagacctaccctctcttcttcgga
acagccattttttcttttgaaagcattggtgtggttctgcctctggaaaacaagatgaag
aatgcccgccacttcccagccatcctgtctttgggaatgtccatcgtcacttccctatac
attggcatggcggctctgggctacctgcggtttggagatgacatcaaggccagcataagc
cttaacctgcctaactgctggctgtaccagtctgtcaagcttctctacattgccggcatc
ctgtgcacctatgccctgcagttctacgtccctgcagaaatcatcatcccctttgccatc
tcccgggtgtcaacacgctgggcactgcctctggatctgtccattcgcctcgtcatggtc
tgcctgacatgcctcctggccatcctcatcccccgcctggacctggtcatctccctggtg
ggctccgtgagtggcaccgccctggccctcatcatcccaccgctcctggaggtcaccacg
ttctactcagagggcatgagccccctcaccatcttcaaggacgccctgatcagcatcctg
ggcttcgtgggctttgtggtggggacctaccaggccctggacgagctgctcaagtcagaa
gactctcaccccttttccaactccaccacttttgttcggagtgaagctgcagaccttccc
ggaatgaagctgcagaccttcgcagagagtgttacagctcataaaggcagtgtggaccca
aaaaactcaggagcccagctggcttcacccagtggatcccacaccggggatgcaggtgga
gctacctgccagtcctgcgccgtgggcccgcactcctcagcccttgggtggtcgatggga
ctgggcgccgtggagcagggggcagcgctcatcggggaggctctggccgcacaggagccc
atgaagcggcccctccagattgtaaattccatgagaacagagattgtaatgtcattgctt
ggaagggactacaacagtgagctgaactccttggacaacggacctcagtcaccctcagag
agcagcagtagcattacttcagagaatgtccatcctgctggagaagctggactatcgatg
atgcaaactttgatccacttgttgaaatgcaacattggcacagggctcctggggcttccc
ctggccataaagaatgccggcttgttggtcggtcctgtcagccttctggccatcggggtc
ctcaccgtgcactgcatggtcatcctgttgaactgtgctcaacacctcagccagagactg
cagaagacttttgtgaactatggagaggccacgatgtacggccttgaaacctgcccgaac
acctggctgagggcccatgcagtgtggggaaggtacactgtcagcttcttattagtcatc
acccagctgggcttctgcagtgtttattttatgtttatggcagacaatttacaacagatg
gtggaaaaagcccacgtgacctccaacatctgccagcccagggagattctgacgctgacc
cccatcctggacattcgtttctacatgctgataatcctgcccttcctgatcctgttggtg
tttatccagaacctcaaggtgctgtccgtcttctcgacattggccaacatcaccaccctt
gggagcatggctctgatctttgagtatatcatggaggggattccatatcccagcaaccta
cccttgatggcaaactggaagaccttcttgctgttctttggtacagccatcttcacattt
gaaggcgtcggtatggttctgcctctcaaaaaccagatgaagcatccacagcagttttct
tttgttctgtacttggggatgtccattgtcatcatcctctatatcttactggggacactg
ggctacatgaagtttgggtcagacacccaggccagcatcaccctcaacttgcccaattgc
tggttgtaccagtcagtcaagctgatgtactctatcggcatcttcttcacctatgccctc
cagttccacgtcccagctgagatcatcatcccgtttgccatctcccaagtgtcagagagc
tgggcactgtttgtagacctgtctgtccgctcagccttggtctgtctaacctgtgtctca
gccatcctcatcccccgcctggacttggtcatctccctggtaggctccgtgagcagcagc
gccctggctctcatcatcccagccctcctggagatcgtcatcttttactctgaggacatg
agctgtgtcaccattgccaaggacatcatgattagcatcgtgggccttttagggtgtata
tttgggacataccaagccctctatgagttgccccaacccatcagccattccatggccaac
tccacaggtgtccatgcataa

>gi568815593f:151153217_151367448|GENSCAN_predicted_peptide_5|53_aa
MGSEGFQDMDLGEIQEQIDTMPEELTKDDWMEMSASQPVSAEEEEEAAAVSEN

>gi568815593f:151153217_151367448|GENSCAN_predicted_CDS_5|162_bp
atggggagtgaagggtttcaagatatggatcttggagaaattcaagagcaaatagacacc
atgccagaggaattaacaaaagatgactggatggagatgagtgcttctcaaccggtgtca
gctgaggaggaagaagaagcagcagcagtgtcagaaaactaa

>gi568815593f:151153217_151367448|GENSCAN_predicted_peptide_6|67_aa
XSLAILIPHLGMVLTQMSLVSSSTLPLIILCLLEMTTYYSECMSSLIITKDALISILGFV
GFLVGTF

>gi568815593f:151153217_151367448|GENSCAN_predicted_CDS_6|204_bp
ngttccctggccatcctcatcccccatctgggcatggtccttacccagatgagcttggtg
agcagcagcaccctgcccctcatcatcctgtgcctcctggagatgactacctactactca
gagtgcatgagctccctcatcatcaccaaggacgccctgatcagcatcctgggctttgtg
ggatttttggtggggaccttctag