GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:17:41

Sequence gi568815596r:202780863_203011476 : 230614 bp : 39.47% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   5962   6001   40                              -3.25
 1.01 Init +  28161  28445  285  2  0   80   70   195 0.346  14.02
 1.02 Term +  30394  30459   66  0  0   96   44    76 0.945   0.96
 1.03 PlyA +  30865  30870    6                               1.05

 2.08 PlyA -  33029  33024    6                               1.05
 2.07 Term -  33922  33836   87  1  0   84   47   116 0.822   3.78
 2.06 Intr -  35147  35049   99  2  0   99   83    73 0.993   7.29
 2.05 Intr -  36681  36556  126  0  0   68   80    67 0.866   3.86
 2.04 Intr -  39037  38839  199  0  1   86   16   204 0.886  11.43
 2.03 Intr -  40619  40496  124  0  1   61    8   141 0.851   2.12
 2.02 Intr -  44905  44833   73  1  1   29   60    72 0.601  -3.44
 2.01 Init -  48147  47986  162  0  0   56   84   131 0.662   9.28
 2.00 Prom -  48794  48755   40                              -6.45

 3.07 PlyA -  48930  48925    6                               1.05
 3.06 Term -  60495  59962  534  0  0  -89   50   739 0.117  45.66
 3.05 Intr -  60947  60555  393  2  0   67  -12   359 0.170  17.72
 3.04 Intr -  63807  63640  168  0  0  109   72    43 0.009   4.02
 3.03 Intr -  69195  69029  167  1  2   82    5   138 0.174   3.66
 3.02 Intr -  90911  90757  155  1  2   55  119   195 0.996  18.09
 3.01 Init -  91014  90944   71  0  2   62   24   147 0.986   4.27
 3.00 Prom -  94890  94851   40                              -4.15

 4.13 PlyA -  94983  94978    6                               1.05
 4.12 Term - 100075  99998   78  1  0   88   48    50 0.841  -2.22
 4.11 Intr - 101921 101849   73  1  1   66   78   113 0.985   6.59
 4.10 Intr - 102879 102747  133  1  1   96   94   118 0.999  11.98
 4.09 Intr - 103441 103336  106  1  1  121  113    -9 0.999   3.77
 4.08 Intr - 103673 103533  141  2  0   92   91    93 0.975   9.63
 4.07 Intr - 115357 115203  155  2  2  109  106    20 0.860   4.77
 4.06 Intr - 116553 116438  116  2  2   80   72   134 0.952  10.17
 4.05 Intr - 118775 118669  107  2  2   68   27    85 0.931  -1.51
 4.04 Intr - 120257 120163   95  0  2   70   89    91 0.880   6.16
 4.03 Intr - 127097 127003   95  1  2   99   64   127 0.659  10.09
 4.02 Intr - 130683 130574  110  0  2   13  100    76 0.232  -0.54
 4.01 Init - 131756 131655  102  2  0   59   36   136 0.171   5.81
 4.00 Prom - 137166 137127   40                              -8.15

 5.00 Prom + 137266 137305   40                              -6.45
 5.01 Sngl + 143838 144320  483  2  0   68   36   429 0.736  31.52
 5.02 PlyA + 145506 145511    6                               1.05

 6.00 Prom + 146648 146687   40                              -3.55
 6.01 Init + 161041 161154  114  0  0   84   60    93 0.615   6.36
 6.02 Intr + 161878 162105  228  0  0   33  101   128 0.667   5.74
 6.03 Intr + 171697 171817  121  0  1   52   84   123 0.530   7.45
 6.04 Intr + 173143 173272  130  2  1   65  100   127 0.989  10.43
 6.05 Intr + 174812 174896   85  2  1   77  105    37 0.986   3.20
 6.06 Intr + 180375 180564  190  2  1   43   80   138 0.965   6.74
 6.07 Intr + 186116 186236  121  0  1   80  111    59 0.958   6.03
 6.08 Intr + 189057 189200  144  0  0   48   52   148 0.969   5.68
 6.09 Intr + 190643 190876  234  2  0   85   82    96 0.796   4.58
 6.10 Intr + 193472 193634  163  2  1   86   72    28 0.134   0.06
 6.11 Intr + 201210 201579  370  2  1   47   83   261 0.059  15.25
 6.12 Intr + 205248 205276   29  1  2  107  103   -21 0.088  -1.78
 6.13 Term + 225804 226004  201  2  0   60   43   146 0.969   3.71
 6.14 PlyA + 227801 227806    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 201414 201579  166  2  1   97   83   232 0.876  23.44


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:202780863_203011476|GENSCAN_predicted_peptide_1|116_aa
MTSPNKLNSVLVTNPEVTEICDLSEREFKIAVLRKLSEIQDNTEKEFRILSGKLNKEVKI
TFKNQAEIPELKNSIDIVKNASESTGVLIKQKKESTSRHLGKIEKNLREISGVNFA

>gi568815596r:202780863_203011476|GENSCAN_predicted_CDS_1|351_bp
atgacctcaccaaacaaactaaatagtgtactagtgaccaatcctgaagtgacagagata
tgtgacctttcagagagagaattcaaaatagctgttttgaggaagctcagcgaaattcaa
gataacacagagaaggaattcagaatcctatcaggtaaacttaacaaagaggttaaaata
acttttaaaaatcaagcagaaattccagagttgaaaaattcaattgatatagtgaagaac
gcatcagagtcaacaggagtattgatcaagcagaagaaagaatcaaccagccgacacttg
gggaaaatagaaaagaacctacgtgaaatatcgggggtgaatttcgcctga

>gi568815596r:202780863_203011476|GENSCAN_predicted_peptide_2|289_aa
MDSFGQPRPEDNQSVVRRMQKKYWKTKQVFIKATGKKEDEHLVASDAELDAKLEVFHSVQ
ETCTELLKIIEKYQLRLNVISEEENELGLFLKFQAERDATQAGKMMDATGKALCSSAKQR
LALCTPLSRLKQEVATFSQRAVSDTLMTINRMEQARTEYRGALLWMKDVSQELDPDTLKQ
MEKFRKVQMQVRNSKASFDKLKMDVCQKVDLLGASRCNMLSHSLTTYQRTLLGFWKKTAR
MMSQIHEACIGFHPYDFVALKQLQDTPSKISEDNKDEQIGGFLTEQLNK

>gi568815596r:202780863_203011476|GENSCAN_predicted_CDS_2|870_bp
atggattcctttgggcaacccagaccagaagataatcagtcagtagtcagaagaatgcaa
aagaaatactggaaaactaaacaggtctttatcaaagcaacaggaaaaaaagaggatgag
cacttggtggcgtctgatgctgaactggatgctaaacttgaggtttttcactctgttcaa
gagacatgcactgaacttctgaagataatcgagaaataccagctaagactcaatgttata
tcagaggaagaaaatgagctagggctctttttaaaatttcaagcagaacgggatgcaact
caagctggcaaaatgatggatgccactggcaaggcactttgttcttcagccaagcaaaga
ttggccctgtgtactcctctgtctcgtctgaagcaagaagtagcaacattcagtcaaagg
gcagtatctgataccttgatgacaattaatcggatggagcaggcacgcacagaatacaga
ggagctctactgtggatgaaagatgtatcccaagagctggacccagacaccttaaagcaa
atggaaaagtttagaaaagtacagatgcaagtgagaaatagcaaagcttcttttgacaag
ttaaagatggatgtttgtcagaaagtggatttacttggagctagtcgctgcaatatgcta
tctcattcgctcactacctaccagagaacactgcttggattctggaagaaaacagctcga
atgatgtcccaaattcatgaagcctgtattggctttcatccgtatgattttgtagctctc
aagcaactacaagacacgccaagcaagattagtgaagacaataaagatgaacaaataggc
ggttttcttactgaacagctcaataagtaa

>gi568815596r:202780863_203011476|GENSCAN_predicted_peptide_3|495_aa
MLRSRVGPVAGSGRRPRGANADASGSLTPPRTGAEGHWLPEGRESARGSRAVAGTGAGTD
HRTAERDPRRRKSGAGPSSAGLLQFAGGLLYNLFAWVSPAEATEQQRLLPVPSSESFVPE
GHQPDASWNSPRRSGLSGKFGKQKLGKFISIPSFFSHTGKPLVIQLPLTGLLNLILVLGY
EDYLALTPTCLHSCINHVHHGDPEVLQGVHQRWSSGPQAFGNCSYARGPGACISSLSFSR
VGSSIFRGVLGGSYGGASGMGSITAVTVNQSLLSPLNLEVEPNIQAVCTQEKDPQQQICL
LHRQGTIPGAAEQDAGDQSYINSLKQQLETLGLERLKLEAELGNMPGLVEDFKNKYEDEI
NKRTEMENEFVLIRQYVDEAYMNKVELESCLEGLTEEINLLGQLYEEEIQKLQSQILDTS
VVLCMNNSHSLDMDSIIAEVKAQYEEMANHSQAEAESMYQIKYEELQTLAGKHGDDLRHA
KTEIWDEPERQPAPG

>gi568815596r:202780863_203011476|GENSCAN_predicted_CDS_3|1488_bp
atgctccgatcccgagtcgggccggtggcggggtcaggccggcgcccgaggggggcgaac
gcggacgccagcgggagcctgacacctccacgcactggtgcggaggggcactggctgccg
gagggccgggagtcggcgcggggctcgcgggcggtggccggaacgggtgccgggacggat
caccgtacggccgaacgcgacccgaggaggcggaagagcggcgccggcccctcttctgca
ggtctgctacagtttgctggaggtctactctataacctgtttgcctgggtatcaccagca
gaggctacagaacagcaacgattgctgcctgttccttcctctgaaagctttgttccagag
gggcaccagcctgatgccagctggaactctcctaggaggagtggcttgtctggtaaattt
gggaagcaaaaattgggcaagtttatctcaattccttctttcttctctcatacagggaag
cctctggtgattcagttacctctgactggcttgttgaatttaattttagtgctcggttat
gaagattatttggctctcacacccacctgcctccactcctgcatcaaccatgtccatcat
ggtgacccagaagtcctacaaggtgtccaccagaggtggtcctctggcccccaggccttc
ggcaactgctcctatgcgcgtgggcccggtgcctgcatcagctccttgagcttctcccga
gtgggcagcagcatctttcggggtgtcctgggtggaagttatggtggggccagtggcatg
ggaagcatcactgctgtcacagtcaaccagagcctgctgagcccccttaacctggaggtg
gaacccaacatccaggccgtgtgcacccaggagaaggaccctcaacaacaaatttgcctc
ctccatagacaaggtacaattcctggagcagcagaacaagatgctggagaccaaagctac
atcaacagccttaagcagcagctggagactctgggcttggaaaggctgaagctggaggca
gagcttggcaacatgccagggctggtggaagacttcaagaacaaatatgaggatgagatc
aacaaacgtacagagatggagaatgaatttgtcctcatcaggcagtatgtggatgaagct
tatatgaacaaggtagagctagagtcttgcctggaagggctgactgaagagatcaacctc
ctcgggcagctgtatgaagaggagatccagaagctgcagtcccagatcttggacacatct
gtggtgctgtgcatgaacaacagccactccctggacatggacagcatcatcgctgaggtc
aaggcgcagtatgaggagatggccaaccacagccaggctgaggctgagagcatgtaccag
atcaagtatgaggaactgcagacgctggctgggaagcacggggatgacctgcggcatgca
aagactgagatctgggatgaaccagaacgtcagccagctccaggctga

>gi568815596r:202780863_203011476|GENSCAN_predicted_peptide_4|436_aa
MWDPEKAPKLGAEGAASDRLRLGAEAGSCSELRRAGASCCGSANPYVSVGKSCVLLAMAQ
LQTRFYTDNKKYAVDDVPFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQFLR
MPLDKHMEMENISSEEVVEIEYVEKYTAPQPEQCMFHDDWISSIKGAEEWILTGSYDKTS
RIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALH
CCRGHAGSVDSIAVDGSGTKTPIVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVES
GSLKSTLTGNKVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTS
VKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN
KLYSYRYSPTTSHVGA

>gi568815596r:202780863_203011476|GENSCAN_predicted_CDS_4|1311_bp
atgtgggaccccgaaaaggcccccaagcttggcgcggaaggcgccgccagtgaccggctg
cggctgggggcggaggccggcagttgctcggagctccggcgggcaggagcttcgtgttgt
gggtctgctaacccgtacgtttccgtgggcaagtcgtgtgtactcctcgccatggctcag
ctccaaacacgcttctacactgataacaagaaatatgccgtagatgatgttcccttctca
atccctgctgcctctgaaattgccgaccttagtaacatcatcaataaactactaaaggac
aaaaatgagttccacaaacatgtggagtttgatttccttattaagggccagtttctgcga
atgcccttggacaaacacatggaaatggagaacatctcatcagaagaagttgtggaaata
gaatacgtggagaagtatactgcaccccagccagagcaatgcatgttccatgatgactgg
atcagttcaattaaaggggcagaggaatggatcttgactggttcttatgataagacttct
cggatctggtccttggaaggaaagtcaataatgacaattgtgggacatacggatgttgta
aaagatgtggcctgggtgaaaaaagatagtttgtcctgcttattattgagtgcttctatg
gatcagactattctcttatgggagtggaatgtagagagaaacaaagtgaaagccctacac
tgctgtagaggtcatgctggaagtgtagattctatagctgttgatggctcaggaactaaa
actcccatagtgaccctctctggccacatggaggcagtttcctcagttctgtggtcagat
gctgaagaaatctgcagtgcatcttgggaccatacaattagagtgtgggatgttgagtct
ggcagtcttaagtcaactttgacaggaaataaagtgtttaattgtatttcctattctcca
ctttgtaaacgtttagcatctggaagcacagataggcatatcagactgtgggatccccga
actaaagatggttctttggtgtcgctgtccctaacgtcacatactggttgggtgacatca
gtaaaatggtctcctacccatgaacagcagctgatttcaggatctttagataacattgtt
aagctgtgggatacaagaagttgtaaggctcctctctatgatctggctgctcatgaagac
aaagttctgagtgtagactggacagacacagggctacttctgagtggaggagcagacaat
aaattgtattcctacagatattcacctaccacttcccatgttggggcatga

>gi568815596r:202780863_203011476|GENSCAN_predicted_peptide_5|160_aa
MGQMSALTPRTSPGWATAAASGVAWTLAWVWREAMPGLVVWRSITAATVTQSLPSPLKLD
VHTNTQAVCTPEKLQIKTLNKFAPFTEKVPFLEQQNKILETKWILLQQQKVAWSNMDSMF
ESYINNLKQQLDTLSQEQLKLEAELGNMERPVEDYQKCEV

>gi568815596r:202780863_203011476|GENSCAN_predicted_CDS_5|483_bp
atgggccagatgtctgcattaactcctagaacttctcctggatgggcaacagcagcagct
tccggggtagcctggacactggcatgggtctggagggaggctatgccaggtctggtggta
tggaggagcatcacagctgccacagtgacccagagcctcccgagtccccttaagctggat
gtgcacaccaacacccaggctgtatgcaccccggagaaattgcagatcaagaccctaaac
aagtttgcccccttcactgagaaggtacccttcctggagcagcagaacaagatactggag
accaagtggatccttttgcagcagcaaaaagtagcttggagcaacatggacagcatgttt
gagagctacatcaacaacctaaagcagcaactggacacactgagccaggagcagctgaag
ctggaggcagaacttggcaacatggagagaccagtggaggactatcaaaagtgtgaagtt
taa

>gi568815596r:202780863_203011476|GENSCAN_predicted_peptide_6|709_aa
MEQSNDSLRVNHNDGEESKTSAQVFEVWIQLGTFFHPRHLICMDSRDSSFGQNDSPTVLP
ITTREANNSLISQNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASP
TENGQVLRVIPPTQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSN
YILHPQTSFPLPKKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSET
ELESVLTFHKQQTQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQY
GPRRKGFQLKKVSEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQE
KAFNMLKKNLVDAGGVLRWYVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRD
ENCALPSRLHPQVAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPT
VNDIKNHIHEVQKSLRNGDTVYNSEIIPATGLQLQPRYTSPDESPAVVSVNNQPSSSPSG
LLDTIGSAVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGD
VEDTGNLEGTVHRILLGDVQTIPIQIIDNHSALSRNWSYQYFHISKYVRQKLIELQGEMD
ESTIIVGDLSTPLLYKRTDPSSRHKDIVELNSNIDICRLLIQQQQNTHS

>gi568815596r:202780863_203011476|GENSCAN_predicted_CDS_6|2130_bp
atggaacaatctaatgattcattaagagtcaaccataatgacggtgaagagtcaaaaacc
agtgctcaagtatttgaggtatggattcagctgggaacctttttccatcctaggcatcta
atctgtatggactccagggattcttcctttggacaaaatgattctcctacagttttgccc
atcactactcgtgaagcaaataattcactcatatcacagaatataccagggcccctgact
cagacacagactctttctgcagagcaattccatctagtggaccaaaatgggcaggctatt
caatatgaacttcagtcattgggggaatccaatgcacaaatgatgatcgttgccagccca
acagaaaatggacaggtacttcgtgtaattccacctacccagacaggaatggcacaagtg
attatacctcaggggcaacttgtggatgtgaatagtcctcgggatgtccctgaagagaaa
cccagtaacagaaacttaccaactgtaagagtggatactctagcagacaataccagcaat
tacattcttcatcctcaaacatccttcccattgcccaaaaagtcagtgaccggaatgctg
gaagaaccccttctggggcctcttcagccactttcttctaatacacctatatgggcctgc
cgtcttaggagctgtgagaaaattggagattcataccgtggctactgtgtaagtgagact
gaattagaaagtgtcctaacatttcacaagcagcaaacacagagtgtttgggggacccgt
cagtctccaagcccagccaagcctgctacacgcttgatgtggaaatcccagtatgttcca
tatgatggaatcccatttgttaatgcagggagtagagctgtggtaatggagtgtcagtat
gggccaagaagaaaaggtttccagttaaaaaaagtcagtgagcaggaaagcaggtcttgt
cagctctacaaagccacttgtccagctcggatttacattaaaaaggtacagaagtttcct
gaatatagagttcctacagaccccaaaattgacaagaaaattatcagaatggagcaggag
aaagcttttaacatgctaaagaagaacttggtagatgctggtggtgttcttaggtggtat
gtacagttacctacacagcaagctcatcagtatcatgaattagagactccctgcctcact
ttgtcaccttctccttttcctgtgtcttctcttgaagaagaggaaactgcagttagagat
gagaattgtgcattaccctcacgtttacatcctcaagtagcacataagattcaagaatta
gtatcacagggaatagaacaagtgtatgcagtaaggaaacagctaagaaaatttgtggaa
agggaactgttcaaacccgatgaggtacctgaaagacataatttatctttttttccaact
gtaaatgatataaaaaatcacatccatgaggtacagaaatccttgagaaatggagatacg
gtatataactcagagattattccagcaacgggtttgcagttacaaccaaggtacacctct
cctgatgaatcaccagctgtggtatcagtaaataaccagccgtcctctagtccttcagga
cttctggatacaataggaagtgctgtaatgaataataattctctactgcttggtcaaagt
catagccttcaaagagatacatgcttaacccaaaacaatagtactgcctccaccatgggt
aaccttccagaaccagatcaaaatctagttgcaatggacgagctggtagaagttggagat
gttgaggatacagggaatctggaaggaactgttcatcggattctgttgggagatgtgcag
actattccaatacagattatagacaaccactcagctcttagtagaaactggagctatcaa
tattttcatatatcaaaatatgtgaggcaaaaactgatagaactccaaggagaaatggat
gaatccactattatagttggagacttaagtacccctctattatataaacggacagatcca
tcaagcagacataaggacatagttgaattgaacagtaacatcgacatctgtcgactactt
atccaacaacagcagaatacacattcttaa