GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:06:50

Sequence gi568815595r:61642458_61843097 : 200640 bp : 40.91% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  15422  15594  173  1  2   70   -1   168 0.216   5.06
 1.02 Term +  15725  15863  139  2  1   38   48   154 0.263   2.85
 1.03 PlyA +  17370  17375    6                               1.05

 2.00 Prom +  19186  19225   40                              -7.55
 2.01 Init +  28878  28998  121  2  1   68   74    97 0.339   6.70
 2.02 Intr +  31433  31576  144  0  0  110   47    37 0.110   1.13
 2.03 Intr +  37776  37824   49  1  1   76   91    41 0.031   0.02
 2.04 Term +  46003  46249  247  1  1   85   38   192 0.504   8.18
 2.05 PlyA +  46917  46922    6                               1.05

 3.00 Prom +  63548  63587   40                              -4.75
 3.01 Init +  71996  72125  130  1  1   97  -21   147 0.397   5.06
 3.02 Term +  77002  77123  122  2  2  102   40    73 0.493   1.56
 3.03 PlyA +  78636  78641    6                               1.05

 4.03 PlyA -  79645  79640    6                               1.05
 4.02 Term - 100641  99998  644  1  2 -111   48   670 0.387  36.44
 4.01 Init - 102586 102526   61  1  1   50   95    59 0.616   4.26
 4.00 Prom - 102771 102732   40                              -8.15

 5.00 Prom + 103489 103528   40                              -7.75
 5.01 Init + 105583 105586    4  0  1   69   72     0 0.780  -3.29
 5.02 Intr + 106421 106525  105  0  0  105  119   149 0.903  18.97
 5.03 Term + 135567 135733  167  1  2   80   48   106 0.206   2.90
 5.04 PlyA + 136553 136558    6                               1.05

 6.05 PlyA - 137321 137316    6                               1.05
 6.04 Term - 142178 142099   80  0  2   40   39    88 0.057  -3.95
 6.03 Intr - 151340 151220  121  2  1   45   99   100 0.863   5.95
 6.02 Intr - 152364 152341   24  0  0  101  111    12 0.795   2.10
 6.01 Init - 158840 158505  336  2  0   23   79   170 0.390   6.93
 6.00 Prom - 161415 161376   40                              -5.95

 7.00 Prom + 162407 162446   40                              -4.25
 7.01 Init + 174258 174357  100  2  1   43   77    99 0.645   4.77
 7.02 Intr + 175121 175269  149  0  2   27    8   154 0.319   0.33
 7.03 Intr + 175428 175542  115  2  1   52   62    86 0.283   1.50
 7.04 Intr + 180589 180728  140  2  2   82   72    50 0.052   2.06
 7.05 Intr + 193707 193725   19  2  1   82  119    11 0.362  -1.13
 7.06 Term + 195493 195542   50  2  2  130   37    89 0.452   4.49
 7.07 PlyA + 196117 196122    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  42928  43182  255  0  0   50   48   231 0.845   9.90


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:61642458_61843097|GENSCAN_predicted_peptide_1|103_aa
MLCTLLVKQRAAKQLWQCDPGCAAVGDMSVHVDSGYGASLHTGHPPYGQTHSMKMFGNSG
AAKVARIGMFWPDASRHPVPVDSGLVTLQLDIMNSDVPDETVS

>gi568815595r:61642458_61843097|GENSCAN_predicted_CDS_1|312_bp
atgctttgtactttgcttgttaaacagagggctgctaagcagctgtggcagtgtgaccct
ggttgtgctgctgtgggtgacatgagtgtgcatgtggacagtggttatggtgcttcccta
cacactgggcacccaccctatggacagacacactccatgaaaatgtttgggaactcaggg
gctgcgaaagttgccagaataggaatgttctggcctgatgcaagcaggcacccggtgcct
gtggattcaggactggtcacactgcagctggacattatgaattcagatgtccctgatgag
acggtgtcctag

>gi568815595r:61642458_61843097|GENSCAN_predicted_peptide_2|186_aa
MTRKEHAAFKHLFNKAHLAPPLIHSTLSGYSTCFREHRVGGTWMKLETLILSKLRNRKPN
TACCHKWELNKEKTWTHGGEHHTLASLWESLSRQLIVKSPSDGWRDSEATSCGSRSQALS
VISCTAGKALRIFLCSGALWWIGAGKSGSSLSRMQASQSERKEPVSPPPASVFHTKGLNA
YVCKIQ

>gi568815595r:61642458_61843097|GENSCAN_predicted_CDS_2|561_bp
atgactcgtaaggagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccattcaaccctgagtggatatagcacatgtttcagagagcacagggttggg
ggaacatggatgaagctggaaaccctcattctcagcaaactcaggaacagaaaaccaaac
actgcttgttgtcataagtgggagttgaacaaagagaaaacatggacacatggaggggaa
catcacacactggcgtctttgtgggagtccctgtccagacagttaattgtgaagtcgcct
tcagatggctggcgagactcagaggccaccagctgtggcagcaggtctcaagctttgtcg
gtgattagttgcacggcggggaaggctcttcgcattttcctctgttctggggctctctgg
tggattggagcaggcaaatcgggctcctcactgagcaggatgcaggcaagtcagagtgaa
agaaaggagccagtatccccaccacccgctagtgttttccataccaaaggacttaacgct
tatgtttgcaaaattcaatag

>gi568815595r:61642458_61843097|GENSCAN_predicted_peptide_3|83_aa
MMGPRDWYYVPKMGEPQDRSSLAAVDTQMYRVFLAEKSATEGRMTLGSPGSPHCQFSSVI
QPSVVSLSAGLAVAEKGNREKVE

>gi568815595r:61642458_61843097|GENSCAN_predicted_CDS_3|252_bp
atgatgggaccacgagattggtactatgtgccgaagatgggagagccacaagatagaagc
agtctggcagctgtagatactcagatgtacagagtatttcttgcagaaaagtctgctact
gagggaaggatgactcttggctctcccgggtctccccactgccagttttcctctgtgata
cagccttcggtggtgtctttgtcagcaggcttggcagtggcagagaaagggaacagggag
aaggtggaataa

>gi568815595r:61642458_61843097|GENSCAN_predicted_peptide_4|234_aa
MNEHMKDQKADGFCVLEGSDAVSRNTLYEAVREVLHRNQRKRRKFLETVELQISLKNYDP
QKDKCFSGTVRLKSTPRPKLCVCVLGDQQHCDEAKAVDIPHMDIEALKKLKKNKKLVKKL
AKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVGEVKSTIKFQMKKVL
CLAVAVGHVKMTADELVYNIHLAVNFLVSLLKKNWQNVRALYIESTMGKPQRLY

>gi568815595r:61642458_61843097|GENSCAN_predicted_CDS_4|705_bp
atgaatgaacacatgaaagatcaaaaagctgatggtttctgtgttctagagggtagtgat
gcagtctctcgcaacaccctgtacgaggcggtgcgggaagtcctgcaccggaaccagcgc
aagcgccgcaagttcctggagacggtggagttgcagatcagcttgaagaactatgacccc
cagaaggacaagtgcttctcgggcaccgtcagacttaagtccactccccgccctaagttg
tgtgtgtgtgtcctgggggaccagcagcactgtgacgaggctaaggccgtggatatcccc
cacatggacatcgaggcgctgaaaaaactcaaaaagaataaaaaactggtcaagaagctg
gccaagaagtatgatgcgtttttggcctcagagtctctgatcaagcagattccacgaatc
ctcggcccaggtctaaataaggcaggaaagttcccttccctgctcacacacaacgaaaac
atggtggccaaagtgggtgaggtgaagtccacaatcaagttccaaatgaagaaggtgtta
tgtctggctgtagctgttggtcacgtgaagatgacagccgatgagcttgtgtataacatt
cacctggctgtcaacttcttggtgtcattgctcaagaaaaactggcagaatgtccgggcc
ttatatatcgagagcaccatgggcaagccccagcgcctatattaa

>gi568815595r:61642458_61843097|GENSCAN_predicted_peptide_5|91_aa
MALTEGYVGALHENRHGSAVQIRRRKASGDPYWAYSGYLEACPMPSTVAPLEVVTHFVIG
RGSQLQVIQVLGVLIKELDKTLRKVRKRTKE

>gi568815595r:61642458_61843097|GENSCAN_predicted_CDS_5|276_bp
atggcgttgacagaaggctacgttggggccctgcacgagaatagacacggcagcgcagtg
cagatccgcaggcgcaaggcttcaggcgacccgtactgggcctactctggatacttggag
gcctgccccatgccaagcactgtggctccactggaggttgtaacccattttgttattggt
agagggtctcaactgcaagttatccaggttcttggtgttttgatcaaagaattggacaaa
acgctcagaaaagtgaggaaaagaacgaaggaatga

>gi568815595r:61642458_61843097|GENSCAN_predicted_peptide_6|186_aa
MRVRTPPSPVVCTWRAPEGVCVHRPLGGNHENMCAFEAKLSSQKPFPTSQALPWAASASV
LQKQLVTHFLPYQEVTSQREATAGGARAGASPESTAKLQQISASFHLSSSLKVGDRLYPQ
LKETGKGWRQWPEKKQQQVDSIQKAVLDWTSANLQVKVLAALCIPNLKNNYADDQLTRSG
LSLVEA

>gi568815595r:61642458_61843097|GENSCAN_predicted_CDS_6|561_bp
atgcgtgtgcgcacaccaccctccccagtggtctgtacctggagagcacctgagggcgtc
tgtgtgcatagaccactggggggtaatcatgaaaatatgtgtgcttttgaagctaaatta
agcagtcagaagccatttcccacctcacaagcactcccctgggctgccagtgcatctgtt
ttgcagaagcagctggtgacacactttttaccttaccaggaagtcacttcccagagggaa
gctacggcaggcggtgccagggcaggggcttcaccagagagcactgcaaagcttcagcag
atttctgcttccttccacctttcttcttccttaaaggtgggagaccgactctatccacag
ctcaaggaaactggcaaggggtggagacagtggccagaaaaaaaacaacaacaagtagac
agcatccagaaagctgtactggactggacttctgccaatttgcaagttaaggtcttggct
gcgttatgcatacccaacttaaagaacaactatgcagatgatcagctaactagatctggc
ttaagtcttgtggaagcttaa

>gi568815595r:61642458_61843097|GENSCAN_predicted_peptide_7|190_aa
MAVFAAVLMRYDESLVEYDCEGDNREVTRFEDLGYEVSPSVSEYVWMGQTTYSYETCVEL
APEGRDRGPEVSNQLHIADAHGKVKLARGRTAGGRSQNEQDGAVRVKYRQGSDNSVEVEK
TGVLGALNYPGLNIFYHLLHPIMRSLHLQVRLLWEIDGVEIDDEPVAQLCVGITGTSALM
DQAPDTFAHI

>gi568815595r:61642458_61843097|GENSCAN_predicted_CDS_7|573_bp
atggctgtttttgcagcggtcttgatgagatatgatgaaagtttggttgagtatgattgt
gaaggagataatagagaagtgaccagatttgaagaccttggttatgaggtatctccatca
gtctcagaatatgtgtggatgggacaaaccacctacagctacgagacctgcgtggaattg
gccccagagggaagagacagaggacctgaagtctcaaatcagctgcatattgcagatgcc
catgggaaagtaaaacttgcaagaggaagaactgctgggggtagaagtcagaatgaacaa
gatggggcggtgagagtcaagtatagacaaggttcagataacagtgtggaagttgagaag
acaggagttcttggggcacttaattaccctgggctgaatattttttaccatctactccat
cccatcatgcgtagtttgcatttgcaagttcggttactttgggagattgatggagttgaa
attgatgatgagccagttgcacagctatgtgtaggaatcactgggacatcagccttaatg
gatcaggcccccgacacttttgcccacatttaa