Result of FASTA (omim) for pF1KB7921
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7921, 181 aa
  1>>>pF1KB7921 181 - 181 aa - 181 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.6584+/-0.000326; mu= 7.9201+/- 0.021
 mean_var=141.4260+/-27.870, 0's: 0 Z-trim(120.3): 110  B-trim: 1124 in 1/60
 Lambda= 0.107847
 statistics sampled from 35244 (35393) to 35244 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.77), E-opt: 0.2 (0.415), width:  16
 Scan time:  6.430

The best scores are:                                      opt bits E(85289)
XP_011507881 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181) 1171 192.7 2.8e-49
XP_005273203 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181) 1171 192.7 2.8e-49
NP_001665 (OMIM: 603148) cyclic AMP-dependent tran ( 181) 1171 192.7 2.8e-49
NP_001025458 (OMIM: 603148) cyclic AMP-dependent t ( 181) 1171 192.7 2.8e-49
NP_001193413 (OMIM: 603148) cyclic AMP-dependent t ( 124)  785 132.5 2.5e-31
NP_001193417 (OMIM: 603148) cyclic AMP-dependent t ( 124)  785 132.5 2.5e-31
NP_001035709 (OMIM: 603148) cyclic AMP-dependent t ( 135)  756 128.0 6.2e-30
NP_001193415 (OMIM: 603148) cyclic AMP-dependent t ( 106)  478 84.6 5.4e-17
XP_016876460 (OMIM: 608657) PREDICTED: jun dimeriz ( 206)  437 78.5 7.3e-15
XP_016876461 (OMIM: 608657) PREDICTED: jun dimeriz ( 174)  435 78.1   8e-15
NP_001128521 (OMIM: 608657) jun dimerization prote ( 174)  435 78.1   8e-15
NP_569736 (OMIM: 608657) jun dimerization protein  ( 163)  430 77.3 1.3e-14
XP_005267389 (OMIM: 608657) PREDICTED: jun dimeriz ( 163)  430 77.3 1.3e-14
XP_016876463 (OMIM: 608657) PREDICTED: jun dimeriz ( 163)  430 77.3 1.3e-14
NP_001128520 (OMIM: 608657) jun dimerization prote ( 163)  430 77.3 1.3e-14
NP_001128519 (OMIM: 608657) jun dimerization prote ( 163)  430 77.3 1.3e-14
XP_016876462 (OMIM: 608657) PREDICTED: jun dimeriz ( 163)  430 77.3 1.3e-14
XP_016876464 (OMIM: 608657) PREDICTED: jun dimeriz ( 163)  430 77.3 1.3e-14
NP_001287785 (OMIM: 136515) fos-related antigen 1  ( 205)  279 53.9 1.8e-07
NP_005429 (OMIM: 136515) fos-related antigen 1 iso ( 271)  279 54.1 2.2e-07
XP_016859226 (OMIM: 601575) PREDICTED: fos-related ( 287)  278 53.9 2.6e-07
NP_005244 (OMIM: 601575) fos-related antigen 2 [Ho ( 326)  278 54.0 2.8e-07
XP_005258748 (OMIM: 164772) PREDICTED: protein fos ( 237)  274 53.2 3.5e-07
NP_006723 (OMIM: 164772) protein fosB isoform 1 [H ( 338)  274 53.4 4.5e-07
NP_005243 (OMIM: 164810) proto-oncogene c-Fos [Hom ( 380)  260 51.2 2.2e-06
NP_006390 (OMIM: 612476) basic leucine zipper tran ( 125)  208 42.7 0.00027
NP_061134 (OMIM: 612470) basic leucine zipper tran ( 127)  199 41.3 0.00072
NP_001243022 (OMIM: 123811) cyclic AMP-dependent t ( 374)  183 39.3  0.0088
NP_001243021 (OMIM: 123811) cyclic AMP-dependent t ( 447)  184 39.5   0.009
NP_001243020 (OMIM: 123811) cyclic AMP-dependent t ( 487)  184 39.5  0.0096
NP_001243019 (OMIM: 123811) cyclic AMP-dependent t ( 505)  184 39.5  0.0098
NP_001871 (OMIM: 123811) cyclic AMP-dependent tran ( 505)  184 39.5  0.0098


>>XP_011507881 (OMIM: 603148) PREDICTED: cyclic AMP-depe  (181 aa)
 initn: 1171 init1: 1171 opt: 1171  Z-score: 1005.8  bits: 192.7 E(85289): 2.8e-49
Smith-Waterman score: 1171; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181)

               10        20        30        40        50        60
pF1KB7 MMLQHPGQVSASEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MMLQHPGQVSASEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 ALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 LESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFIQQIKEGTLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFIQQIKEGTLQ
              130       140       150       160       170       180

        
pF1KB7 S
       :
XP_011 S
        

>>XP_005273203 (OMIM: 603148) PREDICTED: cyclic AMP-depe  (181 aa)
 initn: 1171 init1: 1171 opt: 1171  Z-score: 1005.8  bits: 192.7 E(85289): 2.8e-49
Smith-Waterman score: 1171; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181)

               10        20        30        40        50        60
pF1KB7 MMLQHPGQVSASEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MMLQHPGQVSASEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 ALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 LESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFIQQIKEGTLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFIQQIKEGTLQ
              130       140       150       160       170       180

        
pF1KB7 S
       :
XP_005 S
        

>>NP_001665 (OMIM: 603148) cyclic AMP-dependent transcri  (181 aa)
 initn: 1171 init1: 1171 opt: 1171  Z-score: 1005.8  bits: 192.7 E(85289): 2.8e-49
Smith-Waterman score: 1171; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181)

               10        20        30        40        50        60
pF1KB7 MMLQHPGQVSASEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMLQHPGQVSASEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 ALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 LESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFIQQIKEGTLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFIQQIKEGTLQ
              130       140       150       160       170       180

        
pF1KB7 S
       :
NP_001 S
        

>>NP_001025458 (OMIM: 603148) cyclic AMP-dependent trans  (181 aa)
 initn: 1171 init1: 1171 opt: 1171  Z-score: 1005.8  bits: 192.7 E(85289): 2.8e-49
Smith-Waterman score: 1171; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181)

               10        20        30        40        50        60
pF1KB7 MMLQHPGQVSASEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMLQHPGQVSASEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 ALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 LESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFIQQIKEGTLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFIQQIKEGTLQ
              130       140       150       160       170       180

        
pF1KB7 S
       :
NP_001 S
        

>>NP_001193413 (OMIM: 603148) cyclic AMP-dependent trans  (124 aa)
 initn: 785 init1: 785 opt: 785  Z-score: 683.3  bits: 132.5 E(85289): 2.5e-31
Smith-Waterman score: 785; 100.0% identity (100.0% similar) in 124 aa overlap (58-181:1-124)

        30        40        50        60        70        80       
pF1KB7 SLVFEDFANLTPFVKEELRFAIQNKHLCHRMSSALESVTVSDRPLGVSITKAEVAPEEDE
                                     ::::::::::::::::::::::::::::::
NP_001                               MSSALESVTVSDRPLGVSITKAEVAPEEDE
                                             10        20        30

        90       100       110       120       130       140       
pF1KB7 RKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLN
               40        50        60        70        80        90

       150       160       170       180 
pF1KB7 LHRPTCIVRAQNGRTPEDERNLFIQQIKEGTLQS
       ::::::::::::::::::::::::::::::::::
NP_001 LHRPTCIVRAQNGRTPEDERNLFIQQIKEGTLQS
              100       110       120    

>>NP_001193417 (OMIM: 603148) cyclic AMP-dependent trans  (124 aa)
 initn: 785 init1: 785 opt: 785  Z-score: 683.3  bits: 132.5 E(85289): 2.5e-31
Smith-Waterman score: 785; 100.0% identity (100.0% similar) in 124 aa overlap (58-181:1-124)

        30        40        50        60        70        80       
pF1KB7 SLVFEDFANLTPFVKEELRFAIQNKHLCHRMSSALESVTVSDRPLGVSITKAEVAPEEDE
                                     ::::::::::::::::::::::::::::::
NP_001                               MSSALESVTVSDRPLGVSITKAEVAPEEDE
                                             10        20        30

        90       100       110       120       130       140       
pF1KB7 RKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLN
               40        50        60        70        80        90

       150       160       170       180 
pF1KB7 LHRPTCIVRAQNGRTPEDERNLFIQQIKEGTLQS
       ::::::::::::::::::::::::::::::::::
NP_001 LHRPTCIVRAQNGRTPEDERNLFIQQIKEGTLQS
              100       110       120    

>>NP_001035709 (OMIM: 603148) cyclic AMP-dependent trans  (135 aa)
 initn: 756 init1: 756 opt: 756  Z-score: 658.4  bits: 128.0 E(85289): 6.2e-30
Smith-Waterman score: 756; 100.0% identity (100.0% similar) in 116 aa overlap (1-116:1-116)

               10        20        30        40        50        60
pF1KB7 MMLQHPGQVSASEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMLQHPGQVSASEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 ALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::    
NP_001 ALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKLPRP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 LESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFIQQIKEGTLQ
                                                                   
NP_001 FWVQKTCIWAVDSCK                                             
              130                                                  

>>NP_001193415 (OMIM: 603148) cyclic AMP-dependent trans  (106 aa)
 initn: 478 init1: 478 opt: 478  Z-score: 426.0  bits: 84.6 E(85289): 5.4e-17
Smith-Waterman score: 496; 75.0% identity (75.0% similar) in 116 aa overlap (1-116:1-87)

               10        20        30        40        50        60
pF1KB7 MMLQHPGQVSASEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSS
       :::::::::::::                             ::::::::::::::::::
NP_001 MMLQHPGQVSASE-----------------------------EELRFAIQNKHLCHRMSS
               10                                     20        30 

               70        80        90       100       110       120
pF1KB7 ALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::    
NP_001 ALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKLPRP
              40        50        60        70        80        90 

              130       140       150       160       170       180
pF1KB7 LESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFIQQIKEGTLQ
                                                                   
NP_001 FWVQKTCIWAVDSCK                                             
             100                                                   

>>XP_016876460 (OMIM: 608657) PREDICTED: jun dimerizatio  (206 aa)
 initn: 550 init1: 419 opt: 437  Z-score: 387.8  bits: 78.5 E(85289): 7.3e-15
Smith-Waterman score: 445; 48.8% identity (73.3% similar) in 172 aa overlap (6-176:46-205)

                                        10        20        30     
pF1KB7                          MMLQHPGQVSASEVSASAIVPCLSPPGSLVFEDFA
                                     :::.    :..... : :.:  .:      
XP_016 PMDIRSSLFCQIHLSPWEETGWPATPPAMMPGQIPDPSVTTGSL-PGLGPLTGL------
          20        30        40        50         60              

          40         50        60        70        80        90    
pF1KB7 NLTPFVKEELRFA-IQNKHLCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRE
         . .. :::..: :.:          :: : .. ::  :   :.:.  ::.::.:::::
XP_016 PSSALTVEELKYADIRNLGAMIAPLHFLE-VKLGKRPQPV---KSEL-DEEEERRKRRRE
       70        80        90        100          110        120   

          100       110       120       130       140       150    
pF1KB7 RNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCI
       .::.:::.:::::::.:: ::.:::.:: .:::::.::::::.:.:.:: ::: ::::::
XP_016 KNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQLILMLNRHRPTCI
           130       140       150       160       170       180   

          160       170       180 
pF1KB7 VRAQNGRTPEDERNLFIQQIKEGTLQS
       ::... .:::.: : ...:...     
XP_016 VRTDSVKTPESEGNPLLEQLEKK    
           190       200          

>>XP_016876461 (OMIM: 608657) PREDICTED: jun dimerizatio  (174 aa)
 initn: 550 init1: 419 opt: 435  Z-score: 387.1  bits: 78.1 E(85289): 8e-15
Smith-Waterman score: 445; 48.8% identity (73.3% similar) in 172 aa overlap (6-176:14-173)

                       10        20        30        40         50 
pF1KB7         MMLQHPGQVSASEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFA-IQN
                    :::.    :..... : :.:  .:        . .. :::..: :.:
XP_016 MVAGWPATPPAMMPGQIPDPSVTTGSL-PGLGPLTGL------PSSALTVEELKYADIRN
               10        20         30              40        50   

              60        70        80        90       100       110 
pF1KB7 KHLCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKT
                 :: : .. ::  :   :.:.  ::.::.:::::.::.:::.:::::::.:
XP_016 LGAMIAPLHFLE-VKLGKRPQPV---KSEL-DEEEERRKRRREKNKVAAARCRNKKKERT
            60         70            80        90       100        

             120       130       140       150       160       170 
pF1KB7 ECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFI
       : ::.:::.:: .:::::.::::::.:.:.:: ::: ::::::::... .:::.: : ..
XP_016 EFLQRESERLELMNAELKTQIEELKQERQQLILMLNRHRPTCIVRTDSVKTPESEGNPLL
      110       120       130       140       150       160        

             180 
pF1KB7 QQIKEGTLQS
       .:...     
XP_016 EQLEKK    
      170        




181 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 14:38:26 2016 done: Sat Nov  5 14:38:27 2016
 Total Scan time:  6.430 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]
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