GENSCAN 1.0	Date run:  5-Nov-116	Time: 14:38:54

Sequence gi568815597f:212515022_212719552 : 204531 bp : 44.22% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   4189   4184    6                               1.05
 1.02 Term -   7905   7861   45  0  0  106   52    81 0.332   3.51
 1.01 Init -  25559  25464   96  2  0   68  105    68 0.788   5.58
 1.00 Prom -  26608  26569   40                              -1.66

 2.00 Prom +  37612  37651   40                              -3.16
 2.01 Init +  44859  44925   67  2  1   16   86    55 0.107  -0.67
 2.02 Intr +  45197  45475  279  0  0   90   87    63 0.236   3.85
 2.03 Intr +  67046  67084   39  0  0   96  115    21 0.039   3.80
 2.04 Intr +  68933  68973   41  0  2   91   78    41 0.031   1.34
 2.05 Term +  71399  71497   99  1  0   58   42    81 0.060  -1.37
 2.06 PlyA +  71687  71692    6                               1.05

 3.00 Prom +  78411  78450   40                              -2.16
 3.01 Init +  82254  82315   62  2  2   81   65   131 0.714  10.82
 3.02 Intr +  86806  86833   28  1  1   38   86    11 0.082  -5.98
 3.03 Intr +  89286  89370   85  2  1   79   71    64 0.343   3.19
 3.04 Intr +  92001  92111  111  1  0   21   90    87 0.305   2.55
 3.05 Intr +  92256  92337   82  1  1   90   80    38 0.241   1.90
 3.06 Intr +  94069  94245  177  1  0   27   60   147 0.220   4.83
 3.07 Intr +  99997 100240  244  1  1   63   90   236 0.720  18.80
 3.08 Intr + 103106 103213  108  1  0  103   87   185 0.999  20.38
 3.09 Term + 104337 104534  198  2  0  111   47   243 0.999  19.90
 3.10 PlyA + 105726 105731    6                               1.05

 4.00 Prom + 106508 106547   40                              -7.16
 4.01 Sngl + 109857 111641 1785  2  0   87   36  1252 0.966 114.42
 4.02 PlyA + 111732 111737    6                               1.05

 5.05 PlyA - 112611 112606    6                               1.05
 5.04 Term - 115234 115074  161  2  2  101   47    49 0.029   0.20
 5.03 Intr - 121432 121251  182  0  2   70   -7   109 0.073  -0.89
 5.02 Intr - 122204 122082  123  1  0   60  106    38 0.026   2.50
 5.01 Init - 136386 136316   71  0  2  100  106    35 0.759   7.02
 5.00 Prom - 138266 138227   40                              -4.26

 6.00 Prom + 145455 145494   40                              -4.96
 6.01 Init + 146269 146845  577  0  1   27  -14   346 0.738  13.60
 6.02 Term + 147295 147932  638  2  2   55   44   281 0.451  14.81
 6.03 PlyA + 148314 148319    6                              -0.45

 7.00 Prom + 148682 148721   40                              -2.46
 7.01 Init + 165249 165315   67  2  1   73   94    41 0.720   4.43
 7.02 Intr + 167503 167592   90  2  0    4   99    83 0.414   0.97
 7.03 Intr + 168104 168163   60  0  0  100   93    18 0.595   2.21
 7.04 Term + 168540 168616   77  1  2   86   42    90 0.726   2.20
 7.05 PlyA + 168957 168962    6                               1.05

 8.06 PlyA - 171469 171464    6                               1.05
 8.05 Term - 171958 171770  189  1  0  104   48   271 0.999  22.15
 8.04 Intr - 172566 172446  121  2  1   -1  109   130 0.607   6.70
 8.03 Intr - 180783 180680  104  0  2   57   62    38 0.320  -2.93
 8.02 Intr - 182044 181940  105  1  0   83   78   147 0.802  13.61
 8.01 Init - 182220 182218    3  0  0   52  101     0 0.880  -2.30
 8.00 Prom - 182515 182476   40                              -7.96

 9.00 Prom + 183080 183119   40                              -6.26
 9.01 Init + 184310 185498 1189  1  1   97   21   384 0.058  24.03
 9.02 Intr + 195203 195256   54  0  0   78  111    31 0.256   3.35
 9.03 Term + 196701 196909  209  1  2  106   39    45 0.185  -1.10
 9.04 PlyA + 196912 196917    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:212515022_212719552|GENSCAN_predicted_peptide_1|46_aa
MSSPSCASRGAYSCLCLMLITTTTTTTQESSLILLMAFELLLNHLH

>gi568815597f:212515022_212719552|GENSCAN_predicted_CDS_1|141_bp
atgagctccccgtcgtgtgcaagtagaggagcctactcctgcctttgtctgatgctgatc
accacgacaaccaccacgacccaggaaagctcactgattctgctcatggcctttgagctg
ctgctgaaccacttgcattga

>gi568815597f:212515022_212719552|GENSCAN_predicted_peptide_2|174_aa
MNGELEVSPRSSDSEVHGFGDEALPDPPLTLCFLSGNSRGHFYLKSPHLAYQRPDLPKCR
RNTWLSPLSSSPLEHKTTESFLSEQHACAKNKLETTTTSQNFEQNDGDRVLEMEQRLQNL
ANENTSGPDTVMTKTDRISALMCRVNDVAVTPWGIFSTKSNAWHAVSTKGVFGE

>gi568815597f:212515022_212719552|GENSCAN_predicted_CDS_2|525_bp
atgaatggcgagctggaagtcagtcccaggtcatcagactccgaagtccatggttttggt
gatgaagccctgccagacccacccttgactctgtgtttcctttctggaaactcgagaggc
catttctacttaaagagtcctcacctggcctaccagcgaccagatctgcccaagtgcaga
agaaacacttggttatctcctctttcatcgtccccgctcgagcataaaacaacagaaagt
ttcctatcggaacagcatgcttgtgccaaaaacaaattagaaacaacaacaacttctcaa
aattttgagcaaaatgatggtgaccgtgttctggaaatggagcaaagattgcaaaattta
gcaaatgaaaatacatcaggcccagatacagtgatgaccaaaacagaccgtatctctgcc
ctcatgtgcagagttaatgacgtagcagtgactccatggggcatcttcagcaccaagagc
aatgcctggcatgcagtgagcactaaaggagtattcggtgaatga

>gi568815597f:212515022_212719552|GENSCAN_predicted_peptide_3|364_aa
MIIIFIIDCRHSAYNHKIEELFPYDLVASRDFILDSGVSGFNLSNGNICYLGFGPVDQGP
EQDLGGSRVELQGSRVRRGAKTSEAALRVFPGPWREAGGKEQVFLPFTVPPHPAAAQVSL
PGSHRCSSALRKVSRKAKELTFSFDLGRERFLVTEVGRPLCRQPRAPLLSADGAGLPGWE
RAKMMLQHPGQVSASEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHR
MSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKE
SEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFIQQIKEG
TLQS

>gi568815597f:212515022_212719552|GENSCAN_predicted_CDS_3|1095_bp
atgatcatcatcttcatcatcgactgtagacacagcgcttataatcacaaaattgaagaa
ctgtttccatatgacttggtagcttcaagggacttcatcttggattctggggtctctgga
ttcaatctctcaaatgggaatatctgctacctgggttttggccctgtagaccaaggtcca
gagcaggatctcggaggatcccgcgtggaactccagggctcccgggtccgccggggcgca
aagacttccgaggccgccctccgcgtgttcccaggcccgtggagagaggcaggtggaaag
gagcaggtgtttctgcccttcaccgtgcccccacaccctgcggccgcgcaggtctccctc
ccaggcagccaccgctgctcctcggcgcttcgaaaagtttcccgcaaagcgaaagaacta
actttctcttttgacttggggcgcgaaaggttcctggtgacggaggtcgggcgtccactc
tgccgccagcctcgagcgccgcttctctccgccgacggcgctggcttgcccggctgggag
agggccaaaatgatgcttcaacacccaggccaggtctctgcctcggaagtgagtgcttct
gccatcgtcccctgcctgtcccctcctgggtcactggtgtttgaggattttgctaacctg
acgccctttgtcaaggaagagctgaggtttgccatccagaacaagcacctctgccaccgg
atgtcctctgcgctggaatcagtcactgtcagcgacagacccctcggggtgtccatcaca
aaagccgaggtagcccctgaagaagatgaaaggaaaaagaggcgacgagaaagaaataag
attgcagctgcaaagtgccgaaacaagaagaaggagaagacggagtgcctgcagaaagag
tcggagaagctggaaagtgtgaatgctgaactgaaggctcagattgaggagctcaagaac
gagaagcagcatttgatatacatgctcaaccttcatcggcccacgtgtattgtccgggct
cagaatgggaggactccagaagatgagagaaacctctttatccaacagataaaagaagga
acattgcagagctaa

>gi568815597f:212515022_212719552|GENSCAN_predicted_peptide_4|594_aa
MNADFLLPYYTAQSGSSMSMFNTTMGKLQRQLYKGEYDIFKYAPIFESDFIQITKRGEVI
DVHNRVRMVTMGIARTSPILPLPDVMLLARPATGCEEYAGHGQATKRKKRKAAKNLELTR
LLPLRFVRISVQDHEKQQLRLKFATGRSCYLQLCPALDTRDDLFAYWEKLIYLLRPPMES
NSSTCGIPAEDMMWMPVFQEDRRSLGAVNLQGKGDQDQVSIQSLHMVSEVCGATSAAYAG
GEGLQNDFNKPTNVLNASIPKTSTELAEEPATGGIKEAAAAGAAAGAATGTVAGALSVAA
ANSAPGQVSAAIAGAATIGAGGNKGNMALAGTASMAPNSTKVAVAGAAGKSSEHVSSASM
SLSREGSVSLAIAGVVLTSRTAAEADMDAAAGPPVSTRQSKSSLSGQHGRERTQASAEGC
KEGRERREKDRALGRSSHRRRTGESRHKTRGDKIAQKSSSRSSFSHRANRDDKKEKGCGN
PGSSRHRDSHKGVSHTPISKESRTSHKSGRSLWTTSSGSSKGLGRVSSFLRNVRANLTTK
VVGTPHGRDVNVMAKMAERSTNVAIAETAEGGQGLETVGSMTPDIMETVTFEAH

>gi568815597f:212515022_212719552|GENSCAN_predicted_CDS_4|1785_bp
atgaatgctgattttctgctgccgtattatacggcccagagtggctccagcatgagcatg
ttcaacaccaccatggggaaactgcagcgacaactgtacaagggggagtacgatatattc
aagtatgcaccgatatttgagagcgactttatccagatcaccaaaaggggagaagtgatt
gatgtgcacaaccgtgtccgtatggtgaccatgggcattgcacgtaccagccccatcctc
ccactcccagatgtcatgctactggcacgaccggccaccggctgcgaagagtatgctgga
catggccaggccaccaagagaaaaaaacgcaaggcagcaaagaacttagagctcaccagg
cttctgcccctgaggtttgtacggatctctgttcaagaccatgagaaacaacagctgcgc
ctgaagttcgccactggcagatcttgctatctgcaattgtgtcccgctcttgacacacgg
gatgacctctttgcctattgggaaaaactaatttacctcttgcggccacccatggagagt
aacagcagtacctgtggcattccagctgaagacatgatgtggatgcctgtgtttcaggaa
gacaggaggagcctgggagccgtgaaccttcaaggaaagggggatcaggaccaggtcagc
atccaaagcctccacatggtctctgaggtgtgtggggccacctctgctgcttatgctgga
ggggagggactccaaaatgactttaacaaacccactaatgtgctcaatgcatccatcccc
aaaacatctacagaacttgctgaggagccagcaacaggggggattaaagaggcagcagca
gcaggggcagctgcaggggcagcaacaggcaccgtagcaggtgccttgagtgtggcagca
gccaattctgcccctggacaggtgagcgcagccatagctggggcggccaccatcggtgca
ggaggaaacaaaggcaacatggcccttgcaggcactgccagcatggctccaaacagcacg
aaggtggctgtggcaggggctgcaggcaagtcctcagagcatgtttccagcgcatccatg
agcctttcccgagagggcagtgtgagcctggccattgcaggagtagtactgaccagcagg
acagctgcagaagcagacatggatgcagcagcgggacctcccgtctccacccggcagagc
aagagcagcctgagtggacagcatggaagggagcgaacccaggccagcgctgaaggctgc
aaggaggggagggaaagaagggaaaaggacagggctctcggaaggagttcccatcgccgc
aggacaggtgaaagccgccacaaaacaaggggagacaagattgcccaaaagtcctccagc
aggtcctcattcagccacagagccaatagagatgacaaaaaggagaaaggctgtggcaac
ccggggagcagcaggcacagggactcgcataaaggtgtcagccacacgcccatctcaaag
gagtccaggacctctcacaaatctgggaggagcttatggaccaccagttccggttccagc
aagggacttggcagggtcagctctttcctgaggaacgtcagagccaaccttactacaaaa
gtagtgggcacaccacatggcagagatgtgaacgtcatggctaagatggcggagaggagc
accaacgtggccatcgccgagacagcagagggtggccaggggctggagacggttggttct
atgacaccggacatcatggagacagtgacctttgaagcccattaa

>gi568815597f:212515022_212719552|GENSCAN_predicted_peptide_5|178_aa
MINYQEASHDYMLHMILQVLLTAGVGWKPSKAVRSAESAHDGARSVGSSVTPLGFNPGCT
SGGLGPPVRASGDLLEGGREEGMYGCHHAWMEDQKVFITSICGAPNMCQTVVDLDTQKHG
HSPKGALTCSNSTGPPEALLGDSCPAEKGPVGEHLTQFPADEKGRRVQEASTLRGLQH

>gi568815597f:212515022_212719552|GENSCAN_predicted_CDS_5|537_bp
atgattaattaccaggaagcaagtcacgactatatgcttcatatgattttgcaagtttta
ttaacagctggtgtaggttggaagccttctaaggccgtgcgttctgcagagtcagcccat
gatggggccaggagtgtgggctccagtgtcacccccttgggatttaatcctggctgcacc
tctgggggccttgggcctcctgtcagagctagcggagatctgctggaaggaggccgggag
gaggggatgtacggatgccatcatgcctggatggaggaccagaaggtctttataacaagt
atttgtggagctcctaatatgtgccaaactgtggtagacctggatacccagaaacacggc
cactcccctaaaggagccctgacctgcagtaacagcacagggccaccagaggctctattg
ggcgactcatgccccgcggagaaaggcccagtaggagagcatctgacccagttcccagca
gatgagaaaggaagaagagttcaggaggcttctactctcagaggtctccagcactga

>gi568815597f:212515022_212719552|GENSCAN_predicted_peptide_6|404_aa
MKKKREKNQIDSIKNDEGDITTDLTEIQTTIREYYKHLYANKLENLEEMDKFLNTYTLPR
LNQEELESLNRPITDSEIEAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIE
KEGILPNSFYEASIILIPKPGRDTTTKENFRPISLMNIDAKILSKTLANRIQQHIKNLST
MIKWASSLGCKAGNFSNVSGYKINVQKSQAFLYTKNRQTESQIMSEFPFTTASKRIKYLG
IQLTRDVKDLFKENYKPLLNEIKKDTNKWKNIPCSSVGRINIMKMAILPKVIYRFNAIPI
KLPMTFFTELEKTTLKFIWNQKKARIAKSILSQKNKAGDITLPDFKLYYKATVTKTAWYW
YQNRDIDQWNRTEPSEIMLHIYNHLIFDKPDKNKKRGNDSLFNK

>gi568815597f:212515022_212719552|GENSCAN_predicted_CDS_6|1215_bp
atgaagaagaaaagagagaagaatcaaatagactcaataaaaaatgatgaaggggatatc
accaccgatctcacagaaatacaaactaccatcagagaatactataaacacctctacgca
aataaactagaaaatctagaagaaatggataaattcctcaacacatacaccctcccaaga
ctaaaccaggaagaacttgaatctctgaatagaccaataacagactctgaaattgaggca
ataattaatagcttaccaaccaaaaaaagtccaggaccagatggattcacagctgaattc
taccagaggtacaaggaggagctggtaccattccttctgaaactattccaatcaatagaa
aaagagggaatcctccctaactcattttatgaggccagcatcatcctgataccaaagcct
ggcagagacacaacaacaaaagagaattttagaccaatatccctgatgaacatcgatgca
aaaatcctcagtaaaacactggcaaaccgaatccagcaacacatcaaaaacttatccacc
atgatcaagtgggcttcatccctgggatgcaaggctggcaacttcagcaacgtctcagga
tacaaaatcaatgtgcaaaaatcacaagcattcttatacaccaaaaacagacaaacagag
agccaaatcatgagtgaattcccattcacaactgcttcaaagagaataaaatatctagga
atccaacttacaagggatgtgaaggacctctttaaggagaactacaaaccactcctcaat
gaaataaaaaaggatacaaacaaatggaagaacattccatgctcatcagtaggaagaatc
aatatcatgaaaatggccatactgcccaaggtaatttatagattcaatgccatccccatc
aagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcatatggaac
caaaaaaaagcccgcattgccaagtcaatcctaagccaaaagaacaaagctggagacatc
acgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactgg
taccaaaacagagatatagatcaatggaacagaacagagccctcagaaataatgctgcat
atctacaaccatctgatctttgacaaacctgacaaaaacaagaaacggggaaacgattcc
ctatttaacaaatga

>gi568815597f:212515022_212719552|GENSCAN_predicted_peptide_7|97_aa
MTGRNSSYEGLIQDKAAQDSRTVAFVLICDDISGLLKNIIPEKGDARTAKRTGLLHAARM
TLPGLPGPQGREAQQAAALRLEMQMPSTSPGAQRQYE

>gi568815597f:212515022_212719552|GENSCAN_predicted_CDS_7|294_bp
atgacggggaggaatagcagctatgagggcctaattcaggacaaggcagcccaggacagc
agaacagtagccttcgttctgatctgtgatgatatttctggtcttctcaagaatatcata
ccagaaaaaggtgatgctagaacagccaagagaacaggcctccttcatgcagcacggatg
accctgccaggacttcctggacctcaagggagggaagcccagcaggcagccgctctgaga
cttgagatgcagatgcccagcacaagtcctggtgcccagcggcagtacgaatag

>gi568815597f:212515022_212719552|GENSCAN_predicted_peptide_8|173_aa
MSPEDDDRKVRRREKNRVAAQRSRKKQTQKADKLHELGRGAAPYQELALKASKDLSEEWA
TIPCSCLCRGWSAQNKLDMDGFYIVWIGLRDLSDTLQFYASVNPDGEETEQEYESLEQEN
TMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDPVAGCLPR

>gi568815597f:212515022_212719552|GENSCAN_predicted_CDS_8|522_bp
atgagccctgaggatgatgacaggaaggtccgaaggagagaaaaaaaccgagttgctgct
cagagaagtcggaagaagcagacccagaaggctgacaagctccatgagttgggacgtgga
gctgctccataccaggaactggccttgaaagcatccaaggatctatctgaggaatgggcc
accattccatgttcttgtctttgtcggggttggagtgcccagaacaagttggatatggat
ggtttctacattgtgtggattgggctaagggacctctctgataccctgcagttctacgcc
tctgtaaaccctgatggagaggaaactgaacaggaatatgagagcctggagcaagaaaac
accatgctgcggagagagatcgggaagctgacagaggagctgaagcacctgacagaggca
ctgaaggagcacgagaagatgtgcccgctgctgctctgccctatgaactttgtgccagtg
cctccccggccggaccctgtggccggctgcttgccccgatga

>gi568815597f:212515022_212719552|GENSCAN_predicted_peptide_9|483_aa
MGRPSGQCGAHVPGSTGHARPSQASAPSGFFPQRAQELAQEPFQEPRTLCARQGPWIAPI
PQHPYAPTSACLRPHPPPLHLRSHHHGTPAPTSSPPAARRSPHPTALPEPLALYLLLRLR
LRLVPGRRDAPLQDAAGGREPLRHAGRSSGPARPAPPARPARGAAYGRCPAAGILVPHPR
PRAGPAPSGFPLSPLLHASAQCPRAPVPAAVLPVPRLPRPPSPTPASFPPLPALSPHLGV
PNPTPAAAFRRRPALRGSHVVALKPRREREAHPREATPGGVGTRGAPCSLWGPSAAAGEL
RLRNTVGVLGSVFFPGPIAASSCASATPCVRPPARGSQSRGTFSAAISHPGATLAPPAAP
KPRLWGEDAGFTESHRAPRATGAPGTLQGVPALPVSGHVHIQSPLALHLGISMPDYKPYE
DKGNVFIMLAPPNSVLAVVITSTRNDALKRRQLKKLAHVTQRSDWAGIQTQAEHALNTIL
IGQ

>gi568815597f:212515022_212719552|GENSCAN_predicted_CDS_9|1452_bp
atggggcggccctcagggcagtgcggagcccacgtgccggggagcaccggccatgcccgg
cccagccaggcgtcggcgccctcgggcttcttcccccagagggcgcaggagctggctcag
gagccattccaggagccgcggacactgtgcgcacgacagggtccctggatcgcccccatt
ccccaacatccctacgcccctacctctgcttgtctccggccgcacccgccacctctgcac
ctccgcagtcaccaccacggaactccagcacccacctcctcgccccccgcggcgcgccgg
tccccgcaccccacggccctccctgagcctctcgccctctacctgctgctgcggctgcgg
ctgcggctggttcccgggcgccgcgacgctcctctgcaggacgctgccggcggccgggag
cccttgcgacatgccgggcgctcctctggcccggcccgccccgccccgcccgcgcgccct
gcccgtggggctgcctacgggcgctgtcccgccgccggcatcctcgtgccgcacccacgg
cctcgcgccggccccgccccctcaggcttcccgctctccccgctactccacgcgtcggcc
cagtgtccccgcgcgccagtcccggcagccgtccttcccgtcccacgtctgccccgccct
ccttctcccacccccgcctcgtttcctcctctgcccgccctctctccgcacctcggggtc
ccaaatcccacccctgccgcggctttccgccggcgccccgcgcttcgtggaagtcacgtg
gtggctctgaaaccccggagggaacgcgaagcccacccacgcgaggcgacgcccgggggg
gtggggaccaggggggcgccatgcagcctttggggtccttcggcggctgccggggaactc
aggttgagaaacacagtgggtgttttggggtcggtgttttttcccggtcccatcgcggca
tcttcctgcgcctcagccacgccctgcgtccgccccccggcgcgggggtcacagtcccgg
gggactttctccgcggcgatcagtcatccgggcgccactctcgctcctccagcggccccg
aagccgcggctctggggtgaagacgccggcttcaccgagtcccaccgcgcaccccgagcc
acgggcgccccagggactctgcagggagtgcctgcccttcccgtctcgggacatgttcat
atccaatcacctctggccctgcacctcggcatctccatgccagattacaaaccatatgag
gacaaaggcaatgtcttcattatgctggcccctcccaactcagtgctagctgtagtaata
accagcactagaaatgatgcattgaagcgcagacaattgaagaaacttgcccacgttacc
cagagaagtgactgggctgggattcaaactcaggcagagcatgcacttaatacaatttta
attggtcaataa