Result of FASTA (omim) for pF1KE0204
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0204, 207 aa
  1>>>pF1KE0204 207 - 207 aa - 207 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.3191+/-0.00036; mu= 13.8304+/- 0.022
 mean_var=70.1533+/-14.015, 0's: 0 Z-trim(114.6): 78  B-trim: 587 in 1/49
 Lambda= 0.153126
 statistics sampled from 24433 (24519) to 24433 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.287), width:  16
 Scan time:  5.220

The best scores are:                                      opt bits E(85289)
NP_003853 (OMIM: 603726) fibroblast growth factor  ( 207) 1400 318.0   7e-87
NP_006110 (OMIM: 600483,612702) fibroblast growth  ( 215)  767 178.1 8.9e-45
NP_003858 (OMIM: 603725,615270) fibroblast growth  ( 216)  740 172.2 5.6e-43
XP_011542985 (OMIM: 603725,615270) PREDICTED: fibr ( 232)  719 167.6 1.5e-41
XP_011542986 (OMIM: 603725,615270) PREDICTED: fibr ( 232)  719 167.6 1.5e-41
NP_001291407 (OMIM: 603725,615270) fibroblast grow ( 205)  712 166.0 3.9e-41
XP_005273732 (OMIM: 603725,615270) PREDICTED: fibr ( 239)  701 163.6 2.4e-40
XP_011542987 (OMIM: 603725,615270) PREDICTED: fibr ( 221)  695 162.2 5.6e-40
NP_149353 (OMIM: 600483,612702) fibroblast growth  ( 244)  689 161.0 1.5e-39
NP_149355 (OMIM: 600483,612702) fibroblast growth  ( 204)  682 159.4 3.8e-39
NP_149354 (OMIM: 600483,612702) fibroblast growth  ( 233)  679 158.7 6.8e-39
NP_001193318 (OMIM: 600483,612702) fibroblast grow ( 140)  527 125.0 5.8e-29
NP_002000 (OMIM: 148180) fibroblast growth factor  ( 194)  257 65.5 6.8e-11
NP_002001 (OMIM: 600921,612961) fibroblast growth  ( 208)  237 61.1 1.5e-09
NP_001998 (OMIM: 164980) fibroblast growth factor  ( 206)  230 59.5 4.4e-09
NP_062825 (OMIM: 605558,615721) fibroblast growth  ( 211)  229 59.3 5.3e-09
NP_001244139 (OMIM: 131220) fibroblast growth fact ( 155)  225 58.3 7.6e-09
NP_001244138 (OMIM: 131220) fibroblast growth fact ( 155)  225 58.3 7.6e-09
NP_001138407 (OMIM: 131220) fibroblast growth fact ( 155)  225 58.3 7.6e-09
NP_001138406 (OMIM: 131220) fibroblast growth fact ( 155)  225 58.3 7.6e-09
NP_001138364 (OMIM: 131220) fibroblast growth fact ( 155)  225 58.3 7.6e-09
NP_001244136 (OMIM: 131220) fibroblast growth fact ( 155)  225 58.3 7.6e-09
NP_001244134 (OMIM: 131220) fibroblast growth fact ( 155)  225 58.3 7.6e-09
NP_001244137 (OMIM: 131220) fibroblast growth fact ( 155)  225 58.3 7.6e-09
NP_000791 (OMIM: 131220) fibroblast growth factor  ( 155)  225 58.3 7.6e-09
NP_001244140 (OMIM: 131220) fibroblast growth fact ( 154)  224 58.1 8.8e-09
NP_001244141 (OMIM: 131220) fibroblast growth fact ( 154)  224 58.1 8.8e-09
NP_001244135 (OMIM: 131220) fibroblast growth fact ( 154)  224 58.1 8.8e-09
XP_011535909 (OMIM: 131220) PREDICTED: fibroblast  ( 154)  224 58.1 8.8e-09
XP_005268447 (OMIM: 131220) PREDICTED: fibroblast  ( 154)  224 58.1 8.8e-09
NP_003859 (OMIM: 300827,309630) fibroblast growth  ( 207)  221 57.5 1.8e-08
NP_066276 (OMIM: 134921) fibroblast growth factor  ( 208)  214 56.0 5.2e-08
XP_011533298 (OMIM: 600921,612961) PREDICTED: fibr ( 158)  203 53.5 2.2e-07
NP_004105 (OMIM: 300070) fibroblast growth factor  ( 245)  205 54.0 2.4e-07
NP_378668 (OMIM: 300070) fibroblast growth factor  ( 192)  203 53.5 2.6e-07
NP_001132970 (OMIM: 300070) fibroblast growth fact ( 199)  201 53.1 3.7e-07
NP_004455 (OMIM: 165190,190330) fibroblast growth  ( 268)  202 53.4   4e-07
NP_004456 (OMIM: 149730,180920,602115) fibroblast  ( 208)  197 52.2   7e-07
XP_005248321 (OMIM: 149730,180920,602115) PREDICTE ( 208)  197 52.2   7e-07
NP_001997 (OMIM: 134920) fibroblast growth factor  ( 288)  198 52.5 7.8e-07
NP_001132973 (OMIM: 300070) fibroblast growth fact ( 226)  194 51.6 1.2e-06
NP_001132974 (OMIM: 300070) fibroblast growth fact ( 226)  194 51.6 1.2e-06
XP_005262456 (OMIM: 300070) PREDICTED: fibroblast  ( 255)  194 51.6 1.3e-06
NP_001132972 (OMIM: 300070) fibroblast growth fact ( 255)  194 51.6 1.3e-06
NP_001278741 (OMIM: 165190,190330) fibroblast grow ( 125)  166 45.2 5.3e-05
NP_001290389 (OMIM: 601514) fibroblast growth fact ( 166)  163 44.6 0.00011
XP_005247284 (OMIM: 601513,617166) PREDICTED: fibr ( 207)  164 44.9 0.00011
NP_004103 (OMIM: 601514) fibroblast growth factor  ( 225)  163 44.7 0.00014
NP_001308862 (OMIM: 601515,609307) fibroblast grow ( 187)  160 44.0 0.00019
NP_001308869 (OMIM: 601515,609307) fibroblast grow ( 187)  160 44.0 0.00019


>>NP_003853 (OMIM: 603726) fibroblast growth factor 18 p  (207 aa)
 initn: 1400 init1: 1400 opt: 1400  Z-score: 1680.8  bits: 318.0 E(85289): 7e-87
Smith-Waterman score: 1400; 100.0% identity (100.0% similar) in 207 aa overlap (1-207:1-207)

               10        20        30        40        50        60
pF1KE0 MYSAPSACTCLCLHFLLLCFQVQVLVAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MYSAPSACTCLCLHFLLLCFQVQVLVAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 TSGKHIQVLGRRISARGEDGDKYAQLLVETDTFGSQVRIKGKETEFYLCMNRKGKLVGKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TSGKHIQVLGRRISARGEDGDKYAQLLVETDTFGSQVRIKGKETEFYLCMNRKGKLVGKP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 DGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGPKTRENQQDVHFMKRYPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGPKTRENQQDVHFMKRYPK
              130       140       150       160       170       180

              190       200       
pF1KE0 GQPELQKPFKYTTVTKRSRRIRPTHPA
       :::::::::::::::::::::::::::
NP_003 GQPELQKPFKYTTVTKRSRRIRPTHPA
              190       200       

>>NP_006110 (OMIM: 600483,612702) fibroblast growth fact  (215 aa)
 initn: 735 init1: 579 opt: 767  Z-score: 924.8  bits: 178.1 E(85289): 8.9e-45
Smith-Waterman score: 767; 54.3% identity (80.8% similar) in 208 aa overlap (1-205:1-207)

               10        20        30        40        50        60
pF1KE0 MYSAPSACTCLCLHFLLLCFQVQVLVAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSR
       : :  :: .:: ::.:.::.:.:: : . . .:  ::..:. . :..::. .: ::::::
NP_006 MGSPRSALSCLLLHLLVLCLQAQVTV-QSSPNFTQHVREQSLVTDQLSRRLIRTYQLYSR
               10        20         30        40        50         

               70         80        90       100       110         
pF1KE0 TSGKHIQVLG-RRISARGEDGDKYAQLLVETDTFGSQVRIKGKETEFYLCMNRKGKLVGK
       :::::.:::. .::.: .:::: .:.:.::::::::.::..: :: .:.:::.::::..:
NP_006 TSGKHVQVLANKRINAMAEDGDPFAKLIVETDTFGSRVRVRGAETGLYICMNKKGKLIAK
      60        70        80        90       100       110         

     120       130       140       150       160       170         
pF1KE0 PDGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGPKTRENQQDVHFMKRYP
        .: .:.::: : :::::::::..::: :::..::.::::::: :::..:..:::::: :
NP_006 SNGKGKDCVFTEIVLENNYTALQNAKYEGWYMAFTRKGRPRKGSKTRQHQREVHFMKRLP
     120       130       140       150       160       170         

     180         190       200             
pF1KE0 KGQPELQKP--FKYTTVTKRSRRIRPTHPA      
       .:.   ..   :.. .    .: .: ..        
NP_006 RGHHTTEQSLRFEFLNYPPFTRSLRGSQRTWAPEPR
     180       190       200       210     

>>NP_003858 (OMIM: 603725,615270) fibroblast growth fact  (216 aa)
 initn: 730 init1: 654 opt: 740  Z-score: 892.6  bits: 172.2 E(85289): 5.6e-43
Smith-Waterman score: 740; 53.4% identity (80.9% similar) in 204 aa overlap (11-206:12-214)

                10        20        30        40        50         
pF1KE0  MYSAPSACTCLCLHFLLLCFQVQVLVAEENVDFRIHVENQTRARDDVSRKQLRLYQLYS
                  :::..:.:: :.:    . . .:  .:..:    :..::.:.: :::::
NP_003 MGAARLLPNLTLCLQLLILCCQTQGE-NHPSPNFNQYVRDQGAMTDQLSRRQIREYQLYS
               10        20         30        40        50         

      60        70        80        90       100       110         
pF1KE0 RTSGKHIQVLGRRISARGEDGDKYAQLLVETDTFGSQVRIKGKETEFYLCMNRKGKLVGK
       ::::::.:: :::::: .:::.:.:.:.::::::::.::::: :.: :.:::..:::.::
NP_003 RTSGKHVQVTGRRISATAEDGNKFAKLIVETDTFGSRVRIKGAESEKYICMNKRGKLIGK
      60        70        80        90       100       110         

     120       130       140       150       160       170         
pF1KE0 PDGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGPKTRENQQDVHFMKRYP
       :.: ::.::: : ::::::::...:.. ::...::..::::.. ..:.::...::.::  
NP_003 PSGKSKDCVFTEIVLENNYTAFQNARHEGWFMAFTRQGRPRQASRSRQNQREAHFIKRLY
     120       130       140       150       160       170         

     180             190         200        
pF1KE0 KGQ-P-----ELQKPFKY--TTVTKRSRRIRPTHPA 
       .:: :     : :: :..  .. :.:..: :  .:  
NP_003 QGQLPFPNHAEKQKQFEFVGSAPTRRTKRTRRPQPLT
     180       190       200       210      

>>XP_011542985 (OMIM: 603725,615270) PREDICTED: fibrobla  (232 aa)
 initn: 682 init1: 654 opt: 719  Z-score: 867.0  bits: 167.6 E(85289): 1.5e-41
Smith-Waterman score: 719; 51.7% identity (78.7% similar) in 207 aa overlap (8-206:25-230)

                                10        20        30        40   
pF1KE0                  MYSAPSACTCLCLHFLLLCFQVQVLVAEENVDFRIHVENQTRA
                               :     ..:.:: :.:    . . .:  .:..:   
XP_011 MELSVHRSPGPRIPPLILKTQEGFCIPTMKQLLILCCQTQGE-NHPSPNFNQYVRDQGAM
               10        20        30        40         50         

            50        60        70        80        90       100   
pF1KE0 RDDVSRKQLRLYQLYSRTSGKHIQVLGRRISARGEDGDKYAQLLVETDTFGSQVRIKGKE
        :..::.:.: :::::::::::.:: :::::: .:::.:.:.:.::::::::.::::: :
XP_011 TDQLSRRQIREYQLYSRTSGKHVQVTGRRISATAEDGNKFAKLIVETDTFGSRVRIKGAE
      60        70        80        90       100       110         

           110       120       130       140       150       160   
pF1KE0 TEFYLCMNRKGKLVGKPDGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGP
       .: :.:::..:::.:::.: ::.::: : ::::::::...:.. ::...::..::::.. 
XP_011 SEKYICMNKRGKLIGKPSGKSKDCVFTEIVLENNYTAFQNARHEGWFMAFTRQGRPRQAS
     120       130       140       150       160       170         

           170       180             190         200        
pF1KE0 KTRENQQDVHFMKRYPKGQ-P-----ELQKPFKY--TTVTKRSRRIRPTHPA 
       ..:.::...::.::  .:: :     : :: :..  .. :.:..: :  .:  
XP_011 RSRQNQREAHFIKRLYQGQLPFPNHAEKQKQFEFVGSAPTRRTKRTRRPQPLT
     180       190       200       210       220       230  

>>XP_011542986 (OMIM: 603725,615270) PREDICTED: fibrobla  (232 aa)
 initn: 682 init1: 654 opt: 719  Z-score: 867.0  bits: 167.6 E(85289): 1.5e-41
Smith-Waterman score: 719; 51.7% identity (78.7% similar) in 207 aa overlap (8-206:25-230)

                                10        20        30        40   
pF1KE0                  MYSAPSACTCLCLHFLLLCFQVQVLVAEENVDFRIHVENQTRA
                               :     ..:.:: :.:    . . .:  .:..:   
XP_011 MELSVHRSPGPRIPPLILKTQEGFCIPTMKQLLILCCQTQGE-NHPSPNFNQYVRDQGAM
               10        20        30        40         50         

            50        60        70        80        90       100   
pF1KE0 RDDVSRKQLRLYQLYSRTSGKHIQVLGRRISARGEDGDKYAQLLVETDTFGSQVRIKGKE
        :..::.:.: :::::::::::.:: :::::: .:::.:.:.:.::::::::.::::: :
XP_011 TDQLSRRQIREYQLYSRTSGKHVQVTGRRISATAEDGNKFAKLIVETDTFGSRVRIKGAE
      60        70        80        90       100       110         

           110       120       130       140       150       160   
pF1KE0 TEFYLCMNRKGKLVGKPDGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGP
       .: :.:::..:::.:::.: ::.::: : ::::::::...:.. ::...::..::::.. 
XP_011 SEKYICMNKRGKLIGKPSGKSKDCVFTEIVLENNYTAFQNARHEGWFMAFTRQGRPRQAS
     120       130       140       150       160       170         

           170       180             190         200        
pF1KE0 KTRENQQDVHFMKRYPKGQ-P-----ELQKPFKY--TTVTKRSRRIRPTHPA 
       ..:.::...::.::  .:: :     : :: :..  .. :.:..: :  .:  
XP_011 RSRQNQREAHFIKRLYQGQLPFPNHAEKQKQFEFVGSAPTRRTKRTRRPQPLT
     180       190       200       210       220       230  

>>NP_001291407 (OMIM: 603725,615270) fibroblast growth f  (205 aa)
 initn: 730 init1: 654 opt: 712  Z-score: 859.5  bits: 166.0 E(85289): 3.9e-41
Smith-Waterman score: 723; 52.9% identity (78.9% similar) in 204 aa overlap (11-206:12-203)

                10        20        30        40        50         
pF1KE0  MYSAPSACTCLCLHFLLLCFQVQVLVAEENVDFRIHVENQTRARDDVSRKQLRLYQLYS
                  :::..:.:: :.:            .:..:    :..::.:.: :::::
NP_001 MGAARLLPNLTLCLQLLILCCQTQ------------YVRDQGAMTDQLSRRQIREYQLYS
               10        20                    30        40        

      60        70        80        90       100       110         
pF1KE0 RTSGKHIQVLGRRISARGEDGDKYAQLLVETDTFGSQVRIKGKETEFYLCMNRKGKLVGK
       ::::::.:: :::::: .:::.:.:.:.::::::::.::::: :.: :.:::..:::.::
NP_001 RTSGKHVQVTGRRISATAEDGNKFAKLIVETDTFGSRVRIKGAESEKYICMNKRGKLIGK
       50        60        70        80        90       100        

     120       130       140       150       160       170         
pF1KE0 PDGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGPKTRENQQDVHFMKRYP
       :.: ::.::: : ::::::::...:.. ::...::..::::.. ..:.::...::.::  
NP_001 PSGKSKDCVFTEIVLENNYTAFQNARHEGWFMAFTRQGRPRQASRSRQNQREAHFIKRLY
      110       120       130       140       150       160        

     180             190         200        
pF1KE0 KGQ-P-----ELQKPFKY--TTVTKRSRRIRPTHPA 
       .:: :     : :: :..  .. :.:..: :  .:  
NP_001 QGQLPFPNHAEKQKQFEFVGSAPTRRTKRTRRPQPLT
      170       180       190       200     

>>XP_005273732 (OMIM: 603725,615270) PREDICTED: fibrobla  (239 aa)
 initn: 682 init1: 654 opt: 701  Z-score: 845.4  bits: 163.6 E(85289): 2.4e-40
Smith-Waterman score: 701; 55.2% identity (82.5% similar) in 183 aa overlap (32-206:55-237)

              10        20        30        40        50        60 
pF1KE0 YSAPSACTCLCLHFLLLCFQVQVLVAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSRT
                                     .:  .:..:    :..::.:.: :::::::
XP_005 PWMDQWWCHPKQIDTIFPLVTAKGENHPSPNFNQYVRDQGAMTDQLSRRQIREYQLYSRT
           30        40        50        60        70        80    

              70        80        90       100       110       120 
pF1KE0 SGKHIQVLGRRISARGEDGDKYAQLLVETDTFGSQVRIKGKETEFYLCMNRKGKLVGKPD
       ::::.:: :::::: .:::.:.:.:.::::::::.::::: :.: :.:::..:::.:::.
XP_005 SGKHVQVTGRRISATAEDGNKFAKLIVETDTFGSRVRIKGAESEKYICMNKRGKLIGKPS
           90       100       110       120       130       140    

             130       140       150       160       170       180 
pF1KE0 GTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGPKTRENQQDVHFMKRYPKG
       : ::.::: : ::::::::...:.. ::...::..::::.. ..:.::...::.::  .:
XP_005 GKSKDCVFTEIVLENNYTAFQNARHEGWFMAFTRQGRPRQASRSRQNQREAHFIKRLYQG
          150       160       170       180       190       200    

                   190         200        
pF1KE0 Q-P-----ELQKPFKY--TTVTKRSRRIRPTHPA 
       : :     : :: :..  .. :.:..: :  .:  
XP_005 QLPFPNHAEKQKQFEFVGSAPTRRTKRTRRPQPLT
          210       220       230         

>>XP_011542987 (OMIM: 603725,615270) PREDICTED: fibrobla  (221 aa)
 initn: 682 init1: 654 opt: 695  Z-score: 838.7  bits: 162.2 E(85289): 5.6e-40
Smith-Waterman score: 702; 51.2% identity (76.8% similar) in 207 aa overlap (8-206:25-219)

                                10        20        30        40   
pF1KE0                  MYSAPSACTCLCLHFLLLCFQVQVLVAEENVDFRIHVENQTRA
                               :     ..:.:: :.:            .:..:   
XP_011 MELSVHRSPGPRIPPLILKTQEGFCIPTMKQLLILCCQTQ------------YVRDQGAM
               10        20        30        40                    

            50        60        70        80        90       100   
pF1KE0 RDDVSRKQLRLYQLYSRTSGKHIQVLGRRISARGEDGDKYAQLLVETDTFGSQVRIKGKE
        :..::.:.: :::::::::::.:: :::::: .:::.:.:.:.::::::::.::::: :
XP_011 TDQLSRRQIREYQLYSRTSGKHVQVTGRRISATAEDGNKFAKLIVETDTFGSRVRIKGAE
       50        60        70        80        90       100        

           110       120       130       140       150       160   
pF1KE0 TEFYLCMNRKGKLVGKPDGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGP
       .: :.:::..:::.:::.: ::.::: : ::::::::...:.. ::...::..::::.. 
XP_011 SEKYICMNKRGKLIGKPSGKSKDCVFTEIVLENNYTAFQNARHEGWFMAFTRQGRPRQAS
      110       120       130       140       150       160        

           170       180             190         200        
pF1KE0 KTRENQQDVHFMKRYPKGQ-P-----ELQKPFKY--TTVTKRSRRIRPTHPA 
       ..:.::...::.::  .:: :     : :: :..  .. :.:..: :  .:  
XP_011 RSRQNQREAHFIKRLYQGQLPFPNHAEKQKQFEFVGSAPTRRTKRTRRPQPLT
      170       180       190       200       210       220 

>>NP_149353 (OMIM: 600483,612702) fibroblast growth fact  (244 aa)
 initn: 741 init1: 541 opt: 689  Z-score: 830.9  bits: 161.0 E(85289): 1.5e-39
Smith-Waterman score: 702; 47.0% identity (71.6% similar) in 236 aa overlap (1-205:1-236)

               10        20                                    30  
pF1KE0 MYSAPSACTCLCLHFLLLCFQVQV----------------------------LVAEENVD
       : :  :: .:: ::.:.::.:.:                             .... . .
NP_149 MGSPRSALSCLLLHLLVLCLQAQEGPGRGPALGRELASLFRAGREPQGVSQQVTVQSSPN
               10        20        30        40        50        60

             40        50        60        70         80        90 
pF1KE0 FRIHVENQTRARDDVSRKQLRLYQLYSRTSGKHIQVLG-RRISARGEDGDKYAQLLVETD
       :  ::..:. . :..::. .: :::::::::::.:::. .::.: .:::: .:.:.::::
NP_149 FTQHVREQSLVTDQLSRRLIRTYQLYSRTSGKHVQVLANKRINAMAEDGDPFAKLIVETD
               70        80        90       100       110       120

             100       110       120       130       140       150 
pF1KE0 TFGSQVRIKGKETEFYLCMNRKGKLVGKPDGTSKECVFIEKVLENNYTALMSAKYSGWYV
       ::::.::..: :: .:.:::.::::..: .: .:.::: : :::::::::..::: :::.
NP_149 TFGSRVRVRGAETGLYICMNKKGKLIAKSNGKGKDCVFTEIVLENNYTALQNAKYEGWYM
              130       140       150       160       170       180

             160       170       180         190       200         
pF1KE0 GFTKKGRPRKGPKTRENQQDVHFMKRYPKGQPELQKP--FKYTTVTKRSRRIRPTHPA  
       .::.::::::: :::..:..:::::: :.:.   ..   :.. .    .: .: ..    
NP_149 AFTRKGRPRKGSKTRQHQREVHFMKRLPRGHHTTEQSLRFEFLNYPPFTRSLRGSQRTWA
              190       200       210       220       230       240

NP_149 PEPR
           

>>NP_149355 (OMIM: 600483,612702) fibroblast growth fact  (204 aa)
 initn: 741 init1: 541 opt: 682  Z-score: 823.7  bits: 159.4 E(85289): 3.8e-39
Smith-Waterman score: 731; 52.9% identity (77.9% similar) in 208 aa overlap (1-205:1-196)

               10        20        30        40        50        60
pF1KE0 MYSAPSACTCLCLHFLLLCFQVQVLVAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSR
       : :  :: .:: ::.:.::.:.:            ::..:. . :..::. .: ::::::
NP_149 MGSPRSALSCLLLHLLVLCLQAQ------------HVREQSLVTDQLSRRLIRTYQLYSR
               10        20                    30        40        

               70         80        90       100       110         
pF1KE0 TSGKHIQVLG-RRISARGEDGDKYAQLLVETDTFGSQVRIKGKETEFYLCMNRKGKLVGK
       :::::.:::. .::.: .:::: .:.:.::::::::.::..: :: .:.:::.::::..:
NP_149 TSGKHVQVLANKRINAMAEDGDPFAKLIVETDTFGSRVRVRGAETGLYICMNKKGKLIAK
       50        60        70        80        90       100        

     120       130       140       150       160       170         
pF1KE0 PDGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGPKTRENQQDVHFMKRYP
        .: .:.::: : :::::::::..::: :::..::.::::::: :::..:..:::::: :
NP_149 SNGKGKDCVFTEIVLENNYTALQNAKYEGWYMAFTRKGRPRKGSKTRQHQREVHFMKRLP
      110       120       130       140       150       160        

     180         190       200             
pF1KE0 KGQPELQKP--FKYTTVTKRSRRIRPTHPA      
       .:.   ..   :.. .    .: .: ..        
NP_149 RGHHTTEQSLRFEFLNYPPFTRSLRGSQRTWAPEPR
      170       180       190       200    




207 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 21:24:55 2016 done: Thu Nov  3 21:24:56 2016
 Total Scan time:  5.220 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com