Result of FASTA (ccds) for pF1KB5769
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5769, 750 aa
  1>>>pF1KB5769 750 - 750 aa - 750 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.6637+/-0.000851; mu= 5.8203+/- 0.051
 mean_var=193.8504+/-38.948, 0's: 0 Z-trim(114.4): 120  B-trim: 82 in 2/49
 Lambda= 0.092117
 statistics sampled from 14831 (14960) to 14831 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.779), E-opt: 0.2 (0.46), width:  16
 Scan time:  5.010

The best scores are:                                      opt bits E(32554)
CCDS81705.1 ARHGAP9 gene_id:64333|Hs108|chr12      ( 821) 5135 695.1 1.1e-199
CCDS44929.1 ARHGAP9 gene_id:64333|Hs108|chr12      ( 640) 3056 418.7 1.4e-116
CCDS8941.2 ARHGAP9 gene_id:64333|Hs108|chr12       ( 731) 3056 418.8 1.5e-116
CCDS44928.1 ARHGAP9 gene_id:64333|Hs108|chr12      ( 547) 1954 272.2 1.5e-72
CCDS11498.1 ARHGAP27 gene_id:201176|Hs108|chr17    ( 548)  463 74.1 6.6e-13
CCDS74082.1 ARHGAP27 gene_id:201176|Hs108|chr17    ( 889)  463 74.2 9.7e-13
CCDS2184.1 ARHGAP15 gene_id:55843|Hs108|chr2       ( 475)  445 71.7 3.1e-12


>>CCDS81705.1 ARHGAP9 gene_id:64333|Hs108|chr12           (821 aa)
 initn: 5135 init1: 5135 opt: 5135  Z-score: 3698.3  bits: 695.1 E(32554): 1.1e-199
Smith-Waterman score: 5135; 99.9% identity (100.0% similar) in 750 aa overlap (1-750:72-821)

                                             10        20        30
pF1KB5                               MLSSRWWPSSWGILGLGPRSPPRGSQLCAL
                                     ::::::::::::::::::::::::::::::
CCDS81 EEWPDSHHYPGPTPAPESSDGPHKVTVLATMLSSRWWPSSWGILGLGPRSPPRGSQLCAL
              50        60        70        80        90       100 

               40        50        60        70        80        90
pF1KB5 YAFTYTGADGQQVSLAEGDRFLLLRKTNSDWWLARRLEAPSTSRPIFVPAAYMIEESIPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 YAFTYTGADGQQVSLAEGDRFLLLRKTNSDWWLARRLEAPSTSRPIFVPAAYMIEESIPS
             110       120       130       140       150       160 

              100       110       120       130       140       150
pF1KB5 QSPTTVIPGQLLWTPGPKLFHGSLEELSQALPSRAQASSEQPPPLPRKMCRSVSTDNLSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 QSPTTVIPGQLLWTPGPKLFHGSLEELSQALPSRAQASSEQPPPLPRKMCRSVSTDNLSP
             170       180       190       200       210       220 

              160       170       180       190       200       210
pF1KB5 SFLKPFQEGPSGRSLSQEDLPSEASASTAGPQPLMSEPPVYCNLVDLRRCPRSPPPGPAC
       :.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 SLLKPFQEGPSGRSLSQEDLPSEASASTAGPQPLMSEPPVYCNLVDLRRCPRSPPPGPAC
             230       240       250       260       270       280 

              220       230       240       250       260       270
pF1KB5 PLLQRLDAWEQHLDPNSGRCFYINSLTGCKSWKPPRRSRSETNPGSMEGTQTLKRNNDVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PLLQRLDAWEQHLDPNSGRCFYINSLTGCKSWKPPRRSRSETNPGSMEGTQTLKRNNDVL
             290       300       310       320       330       340 

              280       290       300       310       320       330
pF1KB5 QPQAKGFRSDTGTPEPLDPQGSLSLSQRTSQLDPPALQAPRPLPQLLDDPHEVEKSGLLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 QPQAKGFRSDTGTPEPLDPQGSLSLSQRTSQLDPPALQAPRPLPQLLDDPHEVEKSGLLN
             350       360       370       380       390       400 

              340       350       360       370       380       390
pF1KB5 MTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAAL
             410       420       430       440       450       460 

              400       410       420       430       440       450
pF1KB5 AHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVRWVEARREAPTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 AHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVRWVEARREAPTG
             470       480       490       500       510       520 

              460       470       480       490       500       510
pF1KB5 RDQGSGDRENPLELRLSGSGPAELSAGEDEEEESELVSKPLLRLSSRRSSIRGPEGTEQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 RDQGSGDRENPLELRLSGSGPAELSAGEDEEEESELVSKPLLRLSSRRSSIRGPEGTEQN
             530       540       550       560       570       580 

              520       530       540       550       560       570
pF1KB5 RVRNKLKRLIAKRPPLQSLQERGLLRDQVFGCQLESLCQREGDTVPSFLRLCIAAVDKRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 RVRNKLKRLIAKRPPLQSLQERGLLRDQVFGCQLESLCQREGDTVPSFLRLCIAAVDKRG
             590       600       610       620       630       640 

              580       590       600       610       620       630
pF1KB5 LDVDGIYRVSGNLAVVQKLRFLVDRERAVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 LDVDGIYRVSGNLAVVQKLRFLVDRERAVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVV
             650       660       670       680       690       700 

              640       650       660       670       680       690
pF1KB5 TGALKLFLRELPQPLVPPLLLPHFRAALALSESEQCLSQIQELIGSMPKPNHDTLRYLLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 TGALKLFLRELPQPLVPPLLLPHFRAALALSESEQCLSQIQELIGSMPKPNHDTLRYLLE
             710       720       730       740       750       760 

              700       710       720       730       740       750
pF1KB5 HLCRVIAHSDKNRMTPHNLGIVFGPTLFRPEQETSDPAAHALYPGQLVQLMLTNFTSLFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 HLCRVIAHSDKNRMTPHNLGIVFGPTLFRPEQETSDPAAHALYPGQLVQLMLTNFTSLFP
             770       780       790       800       810       820 

>>CCDS44929.1 ARHGAP9 gene_id:64333|Hs108|chr12           (640 aa)
 initn: 3050 init1: 3050 opt: 3056  Z-score: 2206.6  bits: 418.7 E(32554): 1.4e-116
Smith-Waterman score: 4331; 97.0% identity (97.1% similar) in 658 aa overlap (1-658:1-639)

               10        20        30        40        50        60
pF1KB5 MLSSRWWPSSWGILGLGPRSPPRGSQLCALYAFTYTGADGQQVSLAEGDRFLLLRKTNSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MLSSRWWPSSWGILGLGPRSPPRGSQLCALYAFTYTGADGQQVSLAEGDRFLLLRKTNSD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 WWLARRLEAPSTSRPIFVPAAYMIEESIPSQSPTTVIPGQLLWTPGPKLFHGSLEELSQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 WWLARRLEAPSTSRPIFVPAAYMIEESIPSQSPTTVIPGQLLWTPGPKLFHGSLEELSQA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 LPSRAQASSEQPPPLPRKMCRSVSTDNLSPSFLKPFQEGPSGRSLSQEDLPSEASASTAG
       :::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS44 LPSRAQASSEQPPPLPRKMCRSVSTDNLSPSLLKPFQEGPSGRSLSQEDLPSEASASTAG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 PQPLMSEPPVYCNLVDLRRCPRSPPPGPACPLLQRLDAWEQHLDPNSGRCFYINSLTGCK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PQPLMSEPPVYCNLVDLRRCPRSPPPGPACPLLQRLDAWEQHLDPNSGRCFYINSLTGCK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 SWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQAKGFRSDTGTPEPLDPQGSLSLSQRTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQAKGFRSDTGTPEPLDPQGSLSLSQRTS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 QLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFY
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 REPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 REPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHE
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 TELRAWHRALRTVIERLVRWVEARREAPTGRDQGSGDRENPLELRLSGSGPAELSAGEDE
       :::::::::::::::::                   ::::::::::::::::::::::::
CCDS44 TELRAWHRALRTVIERL-------------------DRENPLELRLSGSGPAELSAGEDE
              430                          440       450       460 

              490       500       510       520       530       540
pF1KB5 EEESELVSKPLLRLSSRRSSIRGPEGTEQNRVRNKLKRLIAKRPPLQSLQERGLLRDQVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EEESELVSKPLLRLSSRRSSIRGPEGTEQNRVRNKLKRLIAKRPPLQSLQERGLLRDQVF
             470       480       490       500       510       520 

              550       560       570       580       590       600
pF1KB5 GCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFLVDRERAVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFLVDRERAVT
             530       540       550       560       570       580 

              610       620       630       640       650       660
pF1KB5 SDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVPPLLLPHFRAALAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
CCDS44 SDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVPPLLLPHFRAALG 
             590       600       610       620       630       640 

              670       680       690       700       710       720
pF1KB5 SESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTLFRP

>>CCDS8941.2 ARHGAP9 gene_id:64333|Hs108|chr12            (731 aa)
 initn: 3050 init1: 3050 opt: 3056  Z-score: 2205.8  bits: 418.8 E(32554): 1.5e-116
Smith-Waterman score: 4953; 97.3% identity (97.5% similar) in 750 aa overlap (1-750:1-731)

               10        20        30        40        50        60
pF1KB5 MLSSRWWPSSWGILGLGPRSPPRGSQLCALYAFTYTGADGQQVSLAEGDRFLLLRKTNSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 MLSSRWWPSSWGILGLGPRSPPRGSQLCALYAFTYTGADGQQVSLAEGDRFLLLRKTNSD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 WWLARRLEAPSTSRPIFVPAAYMIEESIPSQSPTTVIPGQLLWTPGPKLFHGSLEELSQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 WWLARRLEAPSTSRPIFVPAAYMIEESIPSQSPTTVIPGQLLWTPGPKLFHGSLEELSQA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 LPSRAQASSEQPPPLPRKMCRSVSTDNLSPSFLKPFQEGPSGRSLSQEDLPSEASASTAG
       :::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS89 LPSRAQASSEQPPPLPRKMCRSVSTDNLSPSLLKPFQEGPSGRSLSQEDLPSEASASTAG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 PQPLMSEPPVYCNLVDLRRCPRSPPPGPACPLLQRLDAWEQHLDPNSGRCFYINSLTGCK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 PQPLMSEPPVYCNLVDLRRCPRSPPPGPACPLLQRLDAWEQHLDPNSGRCFYINSLTGCK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 SWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQAKGFRSDTGTPEPLDPQGSLSLSQRTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 SWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQAKGFRSDTGTPEPLDPQGSLSLSQRTS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 QLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 QLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFY
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 REPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 REPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHE
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 TELRAWHRALRTVIERLVRWVEARREAPTGRDQGSGDRENPLELRLSGSGPAELSAGEDE
       :::::::::::::::::                   ::::::::::::::::::::::::
CCDS89 TELRAWHRALRTVIERL-------------------DRENPLELRLSGSGPAELSAGEDE
              430                          440       450       460 

              490       500       510       520       530       540
pF1KB5 EEESELVSKPLLRLSSRRSSIRGPEGTEQNRVRNKLKRLIAKRPPLQSLQERGLLRDQVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 EEESELVSKPLLRLSSRRSSIRGPEGTEQNRVRNKLKRLIAKRPPLQSLQERGLLRDQVF
             470       480       490       500       510       520 

              550       560       570       580       590       600
pF1KB5 GCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFLVDRERAVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 GCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFLVDRERAVT
             530       540       550       560       570       580 

              610       620       630       640       650       660
pF1KB5 SDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVPPLLLPHFRAALAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 SDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVPPLLLPHFRAALAL
             590       600       610       620       630       640 

              670       680       690       700       710       720
pF1KB5 SESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTLFRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 SESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTLFRP
             650       660       670       680       690       700 

              730       740       750
pF1KB5 EQETSDPAAHALYPGQLVQLMLTNFTSLFP
       ::::::::::::::::::::::::::::::
CCDS89 EQETSDPAAHALYPGQLVQLMLTNFTSLFP
             710       720       730 

>>CCDS44928.1 ARHGAP9 gene_id:64333|Hs108|chr12           (547 aa)
 initn: 1954 init1: 1954 opt: 1954  Z-score: 1416.1  bits: 272.2 E(32554): 1.5e-72
Smith-Waterman score: 3693; 96.6% identity (96.6% similar) in 566 aa overlap (185-750:1-547)

          160       170       180       190       200       210    
pF1KB5 PFQEGPSGRSLSQEDLPSEASASTAGPQPLMSEPPVYCNLVDLRRCPRSPPPGPACPLLQ
                                     ::::::::::::::::::::::::::::::
CCDS44                               MSEPPVYCNLVDLRRCPRSPPPGPACPLLQ
                                             10        20        30

          220       230       240       250       260       270    
pF1KB5 RLDAWEQHLDPNSGRCFYINSLTGCKSWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RLDAWEQHLDPNSGRCFYINSLTGCKSWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQA
               40        50        60        70        80        90

          280       290       300       310       320       330    
pF1KB5 KGFRSDTGTPEPLDPQGSLSLSQRTSQLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KGFRSDTGTPEPLDPQGSLSLSQRTSQLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKI
              100       110       120       130       140       150

          340       350       360       370       380       390    
pF1KB5 AQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 AQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGR
              160       170       180       190       200       210

          400       410       420       430       440       450    
pF1KB5 HLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVRWVEARREAPTGRDQG
       :::::::::::::::::::::::::::::::::::::::::::                 
CCDS44 HLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERL-----------------
              220       230       240       250                    

          460       470       480       490       500       510    
pF1KB5 SGDRENPLELRLSGSGPAELSAGEDEEEESELVSKPLLRLSSRRSSIRGPEGTEQNRVRN
         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 --DRENPLELRLSGSGPAELSAGEDEEEESELVSKPLLRLSSRRSSIRGPEGTEQNRVRN
             260       270       280       290       300       310 

          520       530       540       550       560       570    
pF1KB5 KLKRLIAKRPPLQSLQERGLLRDQVFGCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KLKRLIAKRPPLQSLQERGLLRDQVFGCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVD
             320       330       340       350       360       370 

          580       590       600       610       620       630    
pF1KB5 GIYRVSGNLAVVQKLRFLVDRERAVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GIYRVSGNLAVVQKLRFLVDRERAVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGAL
             380       390       400       410       420       430 

          640       650       660       670       680       690    
pF1KB5 KLFLRELPQPLVPPLLLPHFRAALALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KLFLRELPQPLVPPLLLPHFRAALALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCR
             440       450       460       470       480       490 

          700       710       720       730       740       750
pF1KB5 VIAHSDKNRMTPHNLGIVFGPTLFRPEQETSDPAAHALYPGQLVQLMLTNFTSLFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VIAHSDKNRMTPHNLGIVFGPTLFRPEQETSDPAAHALYPGQLVQLMLTNFTSLFP
             500       510       520       530       540       

>>CCDS11498.1 ARHGAP27 gene_id:201176|Hs108|chr17         (548 aa)
 initn: 999 init1: 461 opt: 463  Z-score: 345.2  bits: 74.1 E(32554): 6.6e-13
Smith-Waterman score: 1095; 36.3% identity (59.9% similar) in 604 aa overlap (171-750:13-546)

              150       160       170       180            190     
pF1KB5 RSVSTDNLSPSFLKPFQEGPSGRSLSQEDLPSEASASTAGPQPLMSEP-----PVYCNLV
                                     :   .  :  :. : : :     ::     
CCDS11                   MQPGLSPGSPGDPRPPTPETDYPESLTSYPEEDYSPVGSFGE
                                 10        20        30        40  

         200       210                 220       230       240     
pF1KB5 DLRRCPRSPPPGPACPLLQ----------RLDAWEQHLDPNSGRCFYINSLTGCKSWKPP
            : . ::: .: . :            . : .  ::. :. .. :   .   :. :
CCDS11 PGPTSPLTTPPGWSCHVSQDKQMLYTNHFTQEQWVRLEDPH-GKPYFYNPEDSSVRWELP
             50        60        70        80         90       100 

         250       260       270       280       290       300     
pF1KB5 RRSRSETNPGSMEGTQTLKRNNDVLQPQAKGFRSDTGTPEPLDPQGSLSLSQRTSQLDPP
       .       : :..     : ..:   : :..   .  .:  ::  ::    ...:    :
CCDS11 QVPVP--APRSIH-----KSSQDGDTP-AQASPPEEKVPAELDEVGSW---EEVS----P
               110            120        130       140             

         310       320       330       340        350       360    
pF1KB5 ALQAPRPLPQLLDDPHEVEKSGLLNMTKIAQGGRKLRK-NWGPSWVVLTGNSLVFYREPP
       :  : :   . ::      :.:.:. :: :. :..::: .:. ::.:: :. :.:...  
CCDS11 ATAAVRT--KTLD------KAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSK
        150               160       170       180       190        

          370        380       390        400       410       420  
pF1KB5 PTAPSSGWGPAG-SRPESSVDLRGAALAHG-RHLSSRRNVLHIRTIPGHEFLLQSDHETE
        .: ..   :.  : :: .:.::::.:. . .  :::.:::..:.  : :.:.: : :. 
CCDS11 TSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDKSSRKNVLELRSRDGSEYLIQHDSEAI
      200       210       220       230       240       250        

            430       440       450       460       470       480  
pF1KB5 LRAWHRALRTVIERLVRWVEARREAPTGRDQGSGDRENPLELRLSGSGPAELSAGEDEEE
       . .::.:.   :..:   .  ..   .  : ::..: .              :  : ::.
CCDS11 ISTWHKAIAQGIQELSAELPPEESESSRVDFGSSERLG--------------SWQEKEED
      260       270       280       290                     300    

            490       500       510         520       530       540
pF1KB5 ESELVSKPLLRLSSRRSSIRGPEGTEQN--RVRNKLKRLIAKRPPLQSLQERGLLRDQVF
           .. : :          :: : :..  .::.::.... .:: ::::.:.: ..::::
CCDS11 ARPNAAAPAL----------GPVGLESDLSKVRHKLRKFLQRRPTLQSLREKGYIKDQVF
          310                 320       330       340       350    

              550       560       570       580       590       600
pF1KB5 GCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFLVDRERAVT
       :: : .::.:: . :: :.. :: ::. ::::.::.::.:::::..::::. ::...   
CCDS11 GCALAALCERERSRVPRFVQQCIRAVEARGLDIDGLYRISGNLATIQKLRYKVDHDE---
          360       370       380       390       400       410    

              610       620       630       640       650          
pF1KB5 SDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVPPLLLPHFR---AA
                      :::::. .:.:.::.:::::::.::::.:: :   . :::   ::
CCDS11 ---------------RLDLDDGRWEDVHVITGALKLFFRELPEPLFP---FSHFRQFIAA
                            420       430       440          450   

       660       670       680       690       700       710       
pF1KB5 LALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTL
       . :... .    ...:. :.: :::::::.:..:::::: :...:::. ....:::::::
CCDS11 IKLQDQARRSRCVRDLVRSLPAPNHDTLRMLFQHLCRVIEHGEQNRMSVQSVAIVFGPTL
           460       470       480       490       500       510   

       720        730       740       750  
pF1KB5 FRPE-QETSDPAAHALYPGQLVQLMLTNFTSLFP  
       .::: .::: : .  .. .:.:.:.: . ...::  
CCDS11 LRPEVEETSMPMTM-VFQNQVVELILQQCADIFPPH
           520        530       540        

>>CCDS74082.1 ARHGAP27 gene_id:201176|Hs108|chr17         (889 aa)
 initn: 1168 init1: 461 opt: 463  Z-score: 342.2  bits: 74.2 E(32554): 9.7e-13
Smith-Waterman score: 1096; 35.8% identity (59.6% similar) in 614 aa overlap (158-750:341-887)

       130       140       150       160       170       180       
pF1KB5 SSEQPPPLPRKMCRSVSTDNLSPSFLKPFQEGPSGRSLSQEDLPSEASASTAGPQPLMSE
                                     :   : : ..   :   .  :  :. : : 
CCDS74 EESRRVFFYNPLTGETAWEDEAENEPEEELEMQPGLSPGSPGDPRPPTPETDYPESLTSY
              320       330       340       350       360       370

            190       200       210                 220       230  
pF1KB5 P-----PVYCNLVDLRRCPRSPPPGPACPLLQ----------RLDAWEQHLDPNSGRCFY
       :     ::          : . ::: .: . :            . : .  ::. :. ..
CCDS74 PEEDYSPVGSFGEPGPTSPLTTPPGWSCHVSQDKQMLYTNHFTQEQWVRLEDPH-GKPYF
              380       390       400       410       420          

            240       250       260       270       280       290  
pF1KB5 INSLTGCKSWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQAKGFRSDTGTPEPLDPQGS
        :   .   :. :.       : :..     : ..:   : :..   .  .:  ::  ::
CCDS74 YNPEDSSVRWELPQVPVPA--PRSIH-----KSSQDGDTP-AQASPPEEKVPAELDEVGS
     430       440         450            460        470       480 

            300       310       320       330       340        350 
pF1KB5 LSLSQRTSQLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKIAQGGRKLRK-NWGPSWVV
           ...:    ::  : :   . ::      :.:.:. :: :. :..::: .:. ::.:
CCDS74 W---EEVS----PATAAVR--TKTLD------KAGVLHRTKTADKGKRLRKKHWSASWTV
                    490               500       510       520      

             360       370        380       390        400         
pF1KB5 LTGNSLVFYREPPPTAPSSGWGPAG-SRPESSVDLRGAALAHG-RHLSSRRNVLHIRTIP
       : :. :.:...   .: ..   :.  : :: .:.::::.:. . .  :::.:::..:.  
CCDS74 LEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDKSSRKNVLELRSRD
        530       540       550       560       570       580      

     410       420       430       440       450       460         
pF1KB5 GHEFLLQSDHETELRAWHRALRTVIERLVRWVEARREAPTGRDQGSGDRENPLELRLSGS
       : :.:.: : :. . .::.:.   :..:   .  ..   .  : ::..: .         
CCDS74 GSEYLIQHDSEAIISTWHKAIAQGIQELSAELPPEESESSRVDFGSSERLG---------
        590       600       610       620       630                

     470       480       490       500       510         520       
pF1KB5 GPAELSAGEDEEEESELVSKPLLRLSSRRSSIRGPEGTEQN--RVRNKLKRLIAKRPPLQ
            :  : ::.    .. : :          :: : :..  .::.::.... .:: ::
CCDS74 -----SWQEKEEDARPNAAAPAL----------GPVGLESDLSKVRHKLRKFLQRRPTLQ
            640       650                 660       670       680  

       530       540       550       560       570       580       
pF1KB5 SLQERGLLRDQVFGCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQ
       ::.:.: ..:::::: : .::.:: . :: :.. :: ::. ::::.::.::.:::::..:
CCDS74 SLREKGYIKDQVFGCALAALCERERSRVPRFVQQCIRAVEARGLDIDGLYRISGNLATIQ
            690       700       710       720       730       740  

       590       600       610       620       630       640       
pF1KB5 KLRFLVDRERAVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVP
       :::. ::...                  :::::. .:.:.::.:::::::.::::.:: :
CCDS74 KLRYKVDHDE------------------RLDLDDGRWEDVHVITGALKLFFRELPEPLFP
            750                         760       770       780    

       650       660       670       680       690       700       
pF1KB5 PLLLPHFRAALALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPH
          . .: ::. :... .    ...:. :.: :::::::.:..:::::: :...:::. .
CCDS74 FSHFRQFIAAIKLQDQARRSRCVRDLVRSLPAPNHDTLRMLFQHLCRVIEHGEQNRMSVQ
          790       800       810       820       830       840    

       710       720        730       740       750  
pF1KB5 NLGIVFGPTLFRPE-QETSDPAAHALYPGQLVQLMLTNFTSLFP  
       ...:::::::.::: .::: : .  .. .:.:.:.: . ...::  
CCDS74 SVAIVFGPTLLRPEVEETSMPMTM-VFQNQVVELILQQCADIFPPH
          850       860        870       880         

>>CCDS2184.1 ARHGAP15 gene_id:55843|Hs108|chr2            (475 aa)
 initn: 1134 init1: 445 opt: 445  Z-score: 333.1  bits: 71.7 E(32554): 3.1e-12
Smith-Waterman score: 1104; 42.1% identity (71.7% similar) in 442 aa overlap (312-749:74-470)

             290       300       310       320       330       340 
pF1KB5 GTPEPLDPQGSLSLSQRTSQLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKIAQGGRKL
                                     :: ::.     ::: : :. .:::.::.::
CCDS21 MILTDVGKVTEPISRHRRNHSQHILKDVIPPLEQLM-----VEKEGYLQKAKIADGGKKL
            50        60        70             80        90        

             350       360       370       380       390       400 
pF1KB5 RKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRN
       ::::. ::.::..  . ::.:    : :.    .: .::: ::: :: .  ... :::.:
CCDS21 RKNWSTSWIVLSSRRIEFYKESKQQALSNM--KTGHKPES-VDLCGAHIEWAKEKSSRKN
      100       110       120         130        140       150     

             410       420       430       440       450       460 
pF1KB5 VLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVRWVEARREAPTGRDQGSGDRENP
       :..: :. :.::::::: .  .  : .:....:.::          :  .:..  .:.  
CCDS21 VFQITTVSGNEFLLQSDIDFIILDWFHAIKNAIDRL----------P--KDSSCPSRN--
         160       170       180       190                   200   

              470          480       490       500       510       
pF1KB5 LEL-RLSGSGPAELSAGED---EEEESELVSKPLLRLSSRRSSIRGPEGTEQNRVRNKLK
       ::: ... :. .:: .  :   .:.. :  .. ..::    :     . ...:::...::
CCDS21 LELFKIQRSSSTELLSHYDSDIKEQKPEHRKSLMFRLHHSAS-----DTSDKNRVKSRLK
             210       220       230       240            250      

       520       530       540       550       560       570       
pF1KB5 RLIAKRPPLQSLQERGLLRDQVFGCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIY
       ..:..:: :..:::.::..::.:: .:...:.::..::: :.. :: ::.::::::::::
CCDS21 KFITRRPSLKTLQEKGLIKDQIFGSHLHKVCERENSTVPWFVKQCIEAVEKRGLDVDGIY
        260       270       280       290       300       310      

       580       590       600       610       620       630       
pF1KB5 RVSGNLAVVQKLRFLVDRERAVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLF
       :::::::..:::::.:.                  :: .:.::...:.::::::::::.:
CCDS21 RVSGNLATIQKLRFIVN------------------QEEKLNLDDSQWEDIHVVTGALKMF
        320       330                         340       350        

       640       650       660       670       680       690       
pF1KB5 LRELPQPLVPPLLLPHFRAALALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIA
       .::::.:: :  .. .:  :.  ....  .  .. :. ..: ::.::.. :. :: ...:
CCDS21 FRELPEPLFPYSFFEQFVEAIKKQDNNTRIEAVKSLVQKLPPPNRDTMKVLFGHLTKIVA
      360       370       380       390       400       410        

       700       710       720       730       740       750    
pF1KB5 HSDKNRMTPHNLGIVFGPTLFRPEQETSDPAAHALYPGQLVQLMLTNFTSLFP    
       ...:: :. ..:::::::::.: :.::.. : : .: .:...:::......:     
CCDS21 KASKNLMSTQSLGIVFGPTLLRAENETGNMAIHMVYQNQIAELMLSEYSKIFGSEED
      420       430       440       450       460       470     




750 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 07:36:41 2016 done: Sat Nov  5 07:36:42 2016
 Total Scan time:  5.010 Total Display time:  0.130

Function used was FASTA [36.3.4 Apr, 2011]
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