GENSCAN 1.0	Date run:  8-Nov-116	Time: 17:05:46

Sequence gi568815593f:52700395_52901837 : 201443 bp : 37.33% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  18459  18693  235  2  1   60  -16   256 0.182   8.74
 1.02 Term +  18739  19409  671  2  2  -21   43   381 0.344  15.66
 1.03 PlyA +  19636  19641    6                               1.05

 2.00 Prom +  19806  19845   40                              -6.15
 2.01 Init +  20269  20937  669  0  0   58   29   439 0.223  30.24
 2.02 Intr +  25151  25267  117  1  0  105   68    71 0.407   6.54
 2.03 Term +  30773  31126  354  1  0   -9   37   271 0.385   5.81
 2.04 PlyA +  32643  32648    6                               1.05

 3.08 PlyA -  33061  33056    6                               1.05
 3.07 Term -  49848  49723  126  0  0   85   42    79 0.015   0.30
 3.06 Intr -  61639  61535  105  1  0  102   90    77 0.973   8.79
 3.05 Intr -  66416  66212  205  1  1   83   78    94 0.795   6.18
 3.04 Intr -  71779  71671  109  2  1  124   22   -17 0.012  -6.28
 3.03 Intr -  75963  75841  123  1  0   73   65    77 0.153   3.54
 3.02 Intr -  79081  78927  155  0  2   74    6   193 0.119   8.49
 3.01 Init -  80849  80803   47  2  2  103   30    44 0.795   0.31
 3.00 Prom -  84340  84301   40                              -5.75

 4.00 Prom +  85757  85796   40                              -8.85
 4.01 Init +  87960  88020   61  2  1  103   93   124 0.991  13.86
 4.02 Term +  91786  91805   20  2  2  118   43     0 0.344  -4.00
 4.03 PlyA +  92224  92229    6                               1.05

 5.00 Prom +  95035  95074   40                              -7.05
 5.01 Init + 100001 100726  726  1  0   76   98   927 0.997  87.35
 5.02 Term + 101015 101446  432  1  0   70   39   599 0.999  47.51
 5.03 PlyA + 101619 101624    6                               1.05

 6.03 PlyA - 101855 101850    6                               1.05
 6.02 Term - 109789 109687  103  0  1   90   41    94 0.822   1.67
 6.01 Init - 119330 118912  419  2  2   71   53   150 0.663   5.75
 6.00 Prom - 120759 120720   40                              -5.45

 7.00 Prom + 126308 126347   40                              -4.05
 7.01 Init + 146586 146646   61  2  1   26  115    30 0.846   0.96
 7.02 Intr + 148971 149091  121  1  1   65  103   159 0.786  13.73
 7.03 Intr + 161053 161165  113  1  2   81   91    65 0.911   5.20
 7.04 Intr + 164369 164457   89  0  2   78   99    83 0.905   7.17
 7.05 Intr + 164577 164688  112  2  1   18   87    75 0.924  -0.57
 7.06 Intr + 165296 165423  128  0  2   94   91    56 0.866   5.98
 7.07 Intr + 181479 181627  149  2  2   62   71   147 0.667   8.51
 7.08 Intr + 187421 187571  151  2  1   62   87   199 0.992  16.44
 7.09 Intr + 193281 193446  166  2  1   79   95   164 0.998  14.81
 7.10 Intr + 197061 197134   74  1  2   55   91    78 0.386   3.01
 7.11 Intr + 197845 197989  145  0  1   27   82    79 0.113   0.13

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:52700395_52901837|GENSCAN_predicted_peptide_1|301_aa
ERSSSPATEQSWTENDFDELREEGFRRSNYSELKEEVRTNGKEDKNFEKKLNEWITRITD
AEKSLKDLMELKTMARELQRVAAMENEMNEMNSEEKFREKRIKRNKQSLQEIWDYVKRPN
LRLIGAPESDGESGTKLEKTLQYIIQENFPNLARQANIQIQEIQRIPQRYSSRRATPRHI
IVRFSKVEMKEKMLRAAREKGRVTHKGKPIRLTADLSAETLQARREWGPIFNILKEKNFQ
PRISYPAKISFISEGEIKYFTDKQMLRDFVTTRPALKQLLKEAPNMERYNRYQPLQKHAK
L

>gi568815593f:52700395_52901837|GENSCAN_predicted_CDS_1|906_bp
gaacgcagctcctcaccagcaacagaacaaagctggacagagaatgactttgacgagttg
agagaggaaggcttcagaagatcaaactactccgagctaaaggaggaagttcgaaccaat
ggcaaagaagataaaaactttgaaaaaaaattaaacgaatggataactagaataactgat
gcagagaagtccttaaaggacctgatggagctgaaaaccatggcacgagaactacaaagg
gtagctgcgatggaaaatgaaatgaatgaaatgaacagtgaagagaagtttagagaaaaa
agaataaaaagaaacaaacaaagcctccaagaaatatgggactatgtgaaaagaccaaat
ctacgtctaatcggtgcacctgaaagtgacggggagagtggaaccaagttggaaaagact
ctgcagtatattatccaggagaacttccccaatctagcaaggcaggccaacattcaaatt
caggaaatacagagaataccacaaagatactcctcaagaagagcaactccaagacacata
attgtcagattcagcaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaa
ggtcgggttacccacaaagggaagcccatcagattaactgctgatctctcagcagaaact
ctacaagccagaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaa
cccagaatttcatatccagccaaaataagcttcataagtgaaggagaaataaagtacttc
acagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaacagctcctg
aaggaagcaccaaacatggaaaggtacaaccggtaccagccactgcaaaaacatgccaaa
ttgtaa

>gi568815593f:52700395_52901837|GENSCAN_predicted_peptide_2|379_aa
MKAEIKMFFETNENKDTNIPESLEHIQSSVEGKFIALNAHKRKQERLKIDTLTSQLKELE
NQEQTLSKASRRQEITKIGAELKEIEIQKTLQKISESRSWFFEKINKIDRPLARLIKKKR
EKNQIDAIKTDKGDITTDPTEIQTTIREYYKHLYSNKLENLEEIDKFLDTYTLPRLNQEA
VESLNRPITGSEIEAVINSLPTKKSRGPDGFTAKFYQRYKEELLSTASCCFMRQMQSDKP
KVSRVLFLISDIWESIFIQDAVISKDVQKHLDVSQAEVCSGVEPSWRTSARAVQKGNVGS
ESPHRVPTGALPSGVVRRGPPSSRPQNGRSTDSLHSACGKAADIQPQLMKAAERGLYPAN
PQRQSSPRPWVSTSGISMT

>gi568815593f:52700395_52901837|GENSCAN_predicted_CDS_2|1140_bp
atgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacacaaacatacca
gaatctctggaacacattcaaagcagtgtagagggaaaatttatagcactaaatgcccac
aaaagaaagcaggaaagactgaaaattgacaccctaacatcacaattaaaagaactagag
aatcaagagcaaacactttcaaaagctagcagaaggcaagaaataactaagataggagca
gaactgaaggaaatagagatacaaaaaacccttcaaaaaatcagtgaatccaggagctgg
ttttttgaaaagatcaacaaaattgatagaccgctagcaagactaataaagaagaaaaga
gagaagaatcaaatagatgcaataaaaaccgacaaaggggatatcaccaccgatcccaca
gaaatacaaaccaccatcagagaatactataaacacctctactcaaataaactagaaaat
ctagaagaaatcgataaattcctcgacacgtacactctcccaagactaaaccaggaagca
gttgaatctctgaatagaccaataacaggctctgaaattgaggcagtaattaatagctta
ccaaccaaaaaaagtcgaggaccagatggattcacggccaaattctaccagaggtacaag
gaggagctgctatcaacagcttcctgttgtttcatgcgtcagatgcagtctgataagccc
aaggtgagccgtgtcctgtttctcatctctgatatatgggaatccatcttcatacaggat
gctgtgatttcaaaggatgtgcagaaacacctggatgtctcccaggcagaagtttgctca
ggggtggagccttcatggagaacctctgctagggcagtacagaaaggaaatgtggggtca
gagtccccacacagagtccccactggggcactgcctagtggagttgtgagaagagggcca
ccatcctccagaccccagaatggtagatccactgacagcttgcacagtgcatgtgggaaa
gctgcagacattcaaccccagctcatgaaagcagctgagagggggctgtaccctgcaaat
ccacagaggcaaagcagcccaaggccatgggtgtccacctctggcatcagcatgacctag

>gi568815593f:52700395_52901837|GENSCAN_predicted_peptide_3|289_aa
MAQTILKAAASFGSTCSVVALKVNGLGILKISSLAATGGDGTVVCLAAIGGDKAATFGAP
VKPHPEKNLKVQRKELVLPVRIRVLKGSGCPIEAVLVEGASQWFEMGEDLKMQSISKCRT
STKSMCYLRRERRKLLGDSGHFHPQTSDPKFFSFWTLGLTPAVCQGLSGLWPETKGCTVS
FLTFEVLRLGLIHHWLPRSSTCRRHIVGVYLLIAQSPDTITMEIKISTYEFEGDTNIQSI
RRSMLECRRLIRGCLPVKFLQQIFISESVSEESSLREAQTIAKLYEKIR

>gi568815593f:52700395_52901837|GENSCAN_predicted_CDS_3|870_bp
atggcccaaaccatacttaaagcggcagcatcatttggtagcacctgctctgtggtagct
ctgaaggtgaatggccttggaatcctgaaaatcagcagtctagcagccactggaggtgat
ggaacagtagtctgtctagcagccattggaggtgacaaagcagccacttttggagctcct
gtaaaaccccatcctgagaaaaacctcaaagtgcaaaggaaggagctagtattaccagtg
agaattagagtcttgaaagggagtgggtgtccaatagaagctgtccttgtggaaggcgcc
agccagtggtttgagatgggggaggacctgaagatgcaaagtattagcaagtgcaggact
tcaacaaagagcatgtgctatttacgtagggagaggaggaaactgttaggagattcaggt
cactttcacccacaaacatcagaccccaagttcttcagcttttggactcttggacttaca
ccagcggtttgccaggggctctcaggcctttggccagagactaaaggctgcactgtcagc
ttccttacttttgaggttttgagactgggactgatccaccactggcttcctcgctcctca
acttgcagacgacatatcgtgggagtttacctcttgatcgcccaatctccagataccatc
acaatggaaattaagatttcaacatatgaatttgagggagacacaaacattcagtctata
agaaggtctatgctagaatgtaggaggttaatccgtgggtgtttacctgtaaaattcctg
cagcaaattttcatctcagagtctgtttctgaggaatcttccctaagagaggcccaaacc
attgccaaattgtatgagaaaatacggtaa

>gi568815593f:52700395_52901837|GENSCAN_predicted_peptide_4|26_aa
MAPRPRARPGVAVACCWLLTETFWLA

>gi568815593f:52700395_52901837|GENSCAN_predicted_CDS_4|81_bp
atggcccctcggccccgcgcccgcccaggggtcgctgtcgcctgctgctggctcctcact
gaaacattttggttggcctag

>gi568815593f:52700395_52901837|GENSCAN_predicted_peptide_5|385_aa
MKLVRKNIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR
VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV
VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR
ALERFYEQVVQAIQRHIHFDVVKCILVASPGFVREQFCDYLFQQAVKTDNKLLLENRSKF
LQVHASSGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVE
KANEAMAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLHVSGEQLSQLT
GVAAILRFPVPELSDQEGDSSSEED

>gi568815593f:52700395_52901837|GENSCAN_predicted_CDS_5|1158_bp
atgaagctcgtgaggaagaacatcgagaaggacaatgcgggccaggtgaccctggtcccc
gaggagcctgaggacatgtggcacacttacaacctcgtgcaggtgggcgacagcctgcgc
gcctccaccatccgcaaggtacagacagagtcctccacgggcagcgtgggcagcaaccgg
gtccgcactaccctcactctctgcgtggaggccatcgacttcgactctcaagcctgccag
ctgcgggttaaggggaccaacatccaagagaatgagtatgtcaagatgggggcttaccac
accatcgagctggagcccaaccgccagttcaccctggccaagaagcagtgggatagtgtg
gtactggagcgcatcgagcaggcctgtgacccagcctggagcgctgatgtggcggctgtg
gtcatgcaggaaggcctcgcccatatctgcttagtcactcccagcatgaccctcactcgg
gccaaggtggaggtgaacatccctaggaaaaggaaaggcaattgctctcagcatgaccgg
gccttggagcggttctatgaacaggtggtccaggctatccagcgccacatacactttgat
gttgtaaagtgcatcctggtggccagcccaggatttgtgagggagcagttctgcgactac
ctgtttcaacaagcagtgaagaccgacaacaaactgctcctggaaaaccggtccaaattt
cttcaggtacatgcctcctccggacacaagtactccctgaaagaggccctttgtgaccct
actgtggctagccgcctttcagacactaaagctgctggggaagtcaaagccttggatgac
ttctataaaatgttacagcatgaaccggatcgagctttctatggactcaagcaggtggag
aaggccaatgaagccatggcaattgacacattgctcatcagcgatgagctcttcaggcat
caggatgtagccacacggagccggtatgtgaggctggtggacagtgtgaaagagaatgca
ggcaccgttaggatattctctagtcttcacgtttctggggaacagctcagccagttgact
ggggtagctgccattctccgcttccctgttcccgaactttctgaccaagagggtgattcc
agttctgaagaggattaa

>gi568815593f:52700395_52901837|GENSCAN_predicted_peptide_6|173_aa
MGKDFMSKTPKAMATKANIDKWDLIKLKNFCTAKETTIRVNRQPTEWEKIFAIYSSDKGL
ISRIYNEHKQIYKKKANNSIKKWAEDMNRHFSKEDIYAAKRHMKKCSSSLAIREMQIKTT
MRYHLTPVRMAIIKKSGNNRNGYGKGQNVSNSPVTIPIFAVLKTKEAKLPFLV

>gi568815593f:52700395_52901837|GENSCAN_predicted_CDS_6|522_bp
atgggcaaggacttcatgtctaaaacaccgaaagcaatggcaacaaaagccaacattgac
aaatgggatctaattaaactaaagaacttctgcacagcaaaagaaactaccatcagagtg
aataggcaacctacagaatgggagaaaatatttgcaatctactcatctgacaaagggcta
atatccagaatctataatgaacacaaacaaatttacaagaaaaaagcaaacaactccatc
aaaaagtgggcagaggatatgaacagacacttctcaaaagaagacatttatgcagccaaa
agacacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccaca
atgagataccatctgacaccagttagaatggcgatcattaaaaagtcaggaaacaacagg
aatggctatggaaagggacagaatgtctcaaactcccctgtcaccatccccatctttgct
gtcctaaaaacgaaagaagctaagcttccttttctggtttaa

>gi568815593f:52700395_52901837|GENSCAN_predicted_peptide_7|437_aa
MLLPICVQGVVLDFDKGLKKVVLRCCVSFNVDVKNSMTFSGPVEDMFGYTVQQYENEEGK
WVLIGSPLVGQPKNRTGDVYKCPVGRGESLPCVKLDLPVNTSIPNVTEVKENMTFGSTLV
TNPNGGFLACGPLYAYRCGHLHYTTGICSDVSPTFQVVNSIAPVQECSTQLDIVIVLDGS
NSIYPWDSVTAFLNDLLERMDIGPKQTQVGIVQYGENVTHEFNLNKYSSTEEVLVAAKKI
VQRGGRQTMTALGIDTARKEAFTEARGARRGVKKVMVIVTDGESHDNHRLKKVIQDCEDE
NIQRFSIAILGSYNRGNLSTEKFVEEIKSIASEPTEKHFFNVSDELALVTIVKTLGERIF
ALEATADQSAASFEMEMSQTGFSAHYSQDWVMLGAVGAYDWNGTVVMQKASQIIIPRNTT
FNVESTKKNEPLASYLX

>gi568815593f:52700395_52901837|GENSCAN_predicted_CDS_7|1311_bp
atgttactgcccatctgtgtacaaggagttgtgctagattttgataaaggattaaaaaaa
gttgttctacgctgctgcgtatcattcaatgttgatgtgaaaaattcaatgactttcagc
ggcccggtggaagacatgtttggatatactgttcaacaatatgaaaatgaagaaggaaaa
tgggtgcttattggttctccgttagttggccaacccaaaaacagaactggagatgtctat
aagtgtccagttgggagaggtgaatcattaccttgtgtaaagttggatctaccagttaat
acatcaattcccaatgtcacagaagtaaaggagaacatgacatttggatcaactttagtc
accaacccaaatggaggatttctggcttgtgggcccttatatgcctatagatgtggacat
ttgcattacacaactggaatctgttctgacgtcagccccacatttcaagtcgtgaattcc
attgcccctgtacaagaatgcagcactcaactggacatagtcatagtgctggatggttcc
aacagtatttacccatgggacagtgttacagcttttttaaatgaccttcttgaaagaatg
gatattggtcctaaacagacacaggttggaattgtacagtatggagaaaacgtgacccat
gagttcaacctcaataagtattcttccaccgaagaggtacttgttgcagcaaagaaaata
gtccagagaggtggccgccagactatgacagctcttggaatagacacagcaagaaaggag
gcattcacggaagcccggggtgcccgaagaggagttaaaaaagtcatggttattgtgaca
gatggagagtctcatgacaatcatcgactgaagaaggtcatccaagactgtgaagatgaa
aacattcaacggttttccatagctattcttggcagctataaccgaggaaatttaagcact
gaaaaatttgtggaggaaataaaatcaattgcaagtgaacccactgaaaagcatttcttc
aatgtctctgatgaattggctctagtcaccattgttaaaactctgggagaaagaatattt
gccctggaagccacagctgaccagtcagcagcttcatttgaaatggaaatgtctcagact
ggcttcagtgctcattattcacaggactgggtcatgcttggagcagtaggagcctatgat
tggaatggaacagttgtcatgcagaaggctagtcaaatcataatccctcgaaacacaacc
tttaatgttgagtctaccaaaaagaatgaaccgcttgcttcttatttagnn