Result of FASTA (omim) for pF1KB6369
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6369, 269 aa
  1>>>pF1KB6369 269 - 269 aa - 269 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.7158+/-0.000406; mu= -1.6988+/- 0.025
 mean_var=173.2865+/-34.530, 0's: 0 Z-trim(117.2): 31  B-trim: 404 in 1/53
 Lambda= 0.097430
 statistics sampled from 28881 (28912) to 28881 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.699), E-opt: 0.2 (0.339), width:  16
 Scan time:  6.430

The best scores are:                                      opt bits E(85289)
XP_016865180 (OMIM: 611502) PREDICTED: centromere  ( 269) 1746 257.3 2.1e-68
XP_016865181 (OMIM: 611502) PREDICTED: centromere  ( 269) 1746 257.3 2.1e-68
XP_011541838 (OMIM: 611502) PREDICTED: centromere  ( 269) 1746 257.3 2.1e-68
NP_071428 (OMIM: 611502) centromere protein K [Hom ( 269) 1746 257.3 2.1e-68
NP_001253967 (OMIM: 611502) centromere protein K [ ( 269) 1746 257.3 2.1e-68
XP_016865179 (OMIM: 611502) PREDICTED: centromere  ( 269) 1746 257.3 2.1e-68
XP_011541836 (OMIM: 611502) PREDICTED: centromere  ( 271) 1732 255.4 8.3e-68
XP_011541837 (OMIM: 611502) PREDICTED: centromere  ( 271) 1732 255.4 8.3e-68
XP_016865183 (OMIM: 611502) PREDICTED: centromere  ( 239) 1548 229.5 4.5e-60
XP_011541839 (OMIM: 611502) PREDICTED: centromere  ( 239) 1548 229.5 4.5e-60
XP_016865184 (OMIM: 611502) PREDICTED: centromere  ( 237) 1495 222.0 7.9e-58
XP_011541842 (OMIM: 611502) PREDICTED: centromere  ( 225) 1376 205.3 8.2e-53
XP_016865185 (OMIM: 611502) PREDICTED: centromere  ( 225) 1367 204.0   2e-52
XP_016865182 (OMIM: 611502) PREDICTED: centromere  ( 248) 1367 204.1 2.1e-52
XP_016865186 (OMIM: 611502) PREDICTED: centromere  ( 208) 1349 201.5 1.1e-51
XP_016865189 (OMIM: 611502) PREDICTED: centromere  ( 191) 1213 182.3 5.6e-46
XP_011541843 (OMIM: 611502) PREDICTED: centromere  ( 205) 1213 182.4   6e-46
XP_011541844 (OMIM: 611502) PREDICTED: centromere  ( 205) 1213 182.4   6e-46
XP_016865188 (OMIM: 611502) PREDICTED: centromere  ( 193) 1192 179.4 4.4e-45
XP_016865190 (OMIM: 611502) PREDICTED: centromere  ( 164) 1064 161.4   1e-39
XP_011541841 (OMIM: 611502) PREDICTED: centromere  ( 236)  813 126.2 5.7e-29
XP_011541840 (OMIM: 611502) PREDICTED: centromere  ( 238)  799 124.2 2.2e-28
XP_016865187 (OMIM: 611502) PREDICTED: centromere  ( 206)  770 120.1 3.3e-27


>>XP_016865180 (OMIM: 611502) PREDICTED: centromere prot  (269 aa)
 initn: 1746 init1: 1746 opt: 1746  Z-score: 1349.0  bits: 257.3 E(85289): 2.1e-68
Smith-Waterman score: 1746; 100.0% identity (100.0% similar) in 269 aa overlap (1-269:1-269)

               10        20        30        40        50        60
pF1KB6 MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLSLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLSLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
              190       200       210       220       230       240

              250       260         
pF1KB6 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
       :::::::::::::::::::::::::::::
XP_016 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
              250       260         

>>XP_016865181 (OMIM: 611502) PREDICTED: centromere prot  (269 aa)
 initn: 1746 init1: 1746 opt: 1746  Z-score: 1349.0  bits: 257.3 E(85289): 2.1e-68
Smith-Waterman score: 1746; 100.0% identity (100.0% similar) in 269 aa overlap (1-269:1-269)

               10        20        30        40        50        60
pF1KB6 MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLSLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLSLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
              190       200       210       220       230       240

              250       260         
pF1KB6 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
       :::::::::::::::::::::::::::::
XP_016 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
              250       260         

>>XP_011541838 (OMIM: 611502) PREDICTED: centromere prot  (269 aa)
 initn: 1746 init1: 1746 opt: 1746  Z-score: 1349.0  bits: 257.3 E(85289): 2.1e-68
Smith-Waterman score: 1746; 100.0% identity (100.0% similar) in 269 aa overlap (1-269:1-269)

               10        20        30        40        50        60
pF1KB6 MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLSLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLSLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
              190       200       210       220       230       240

              250       260         
pF1KB6 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
       :::::::::::::::::::::::::::::
XP_011 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
              250       260         

>>NP_071428 (OMIM: 611502) centromere protein K [Homo sa  (269 aa)
 initn: 1746 init1: 1746 opt: 1746  Z-score: 1349.0  bits: 257.3 E(85289): 2.1e-68
Smith-Waterman score: 1746; 100.0% identity (100.0% similar) in 269 aa overlap (1-269:1-269)

               10        20        30        40        50        60
pF1KB6 MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLSLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLSLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
              190       200       210       220       230       240

              250       260         
pF1KB6 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
       :::::::::::::::::::::::::::::
NP_071 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
              250       260         

>>NP_001253967 (OMIM: 611502) centromere protein K [Homo  (269 aa)
 initn: 1746 init1: 1746 opt: 1746  Z-score: 1349.0  bits: 257.3 E(85289): 2.1e-68
Smith-Waterman score: 1746; 100.0% identity (100.0% similar) in 269 aa overlap (1-269:1-269)

               10        20        30        40        50        60
pF1KB6 MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLSLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLSLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
              190       200       210       220       230       240

              250       260         
pF1KB6 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
       :::::::::::::::::::::::::::::
NP_001 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
              250       260         

>>XP_016865179 (OMIM: 611502) PREDICTED: centromere prot  (269 aa)
 initn: 1746 init1: 1746 opt: 1746  Z-score: 1349.0  bits: 257.3 E(85289): 2.1e-68
Smith-Waterman score: 1746; 100.0% identity (100.0% similar) in 269 aa overlap (1-269:1-269)

               10        20        30        40        50        60
pF1KB6 MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLSLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLSLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
              190       200       210       220       230       240

              250       260         
pF1KB6 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
       :::::::::::::::::::::::::::::
XP_016 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
              250       260         

>>XP_011541836 (OMIM: 611502) PREDICTED: centromere prot  (271 aa)
 initn: 1732 init1: 1732 opt: 1732  Z-score: 1338.4  bits: 255.4 E(85289): 8.3e-68
Smith-Waterman score: 1732; 100.0% identity (100.0% similar) in 267 aa overlap (3-269:5-271)

                 10        20        30        40        50        
pF1KB6   MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLS
           ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTLFQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLS
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB6 LLIMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLIMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKL
               70        80        90       100       110       120

      120       130       140       150       160       170        
pF1KB6 KEDLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KEDLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLS
              130       140       150       160       170       180

      180       190       200       210       220       230        
pF1KB6 TLGEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLGEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSF
              190       200       210       220       230       240

      240       250       260         
pF1KB6 WPPYVELLLRNGIALRHPEDPTRIRLEAFHQ
       :::::::::::::::::::::::::::::::
XP_011 WPPYVELLLRNGIALRHPEDPTRIRLEAFHQ
              250       260       270 

>>XP_011541837 (OMIM: 611502) PREDICTED: centromere prot  (271 aa)
 initn: 1732 init1: 1732 opt: 1732  Z-score: 1338.4  bits: 255.4 E(85289): 8.3e-68
Smith-Waterman score: 1732; 100.0% identity (100.0% similar) in 267 aa overlap (3-269:5-271)

                 10        20        30        40        50        
pF1KB6   MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLS
           ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTLFQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLS
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB6 LLIMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLIMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKL
               70        80        90       100       110       120

      120       130       140       150       160       170        
pF1KB6 KEDLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KEDLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLS
              130       140       150       160       170       180

      180       190       200       210       220       230        
pF1KB6 TLGEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLGEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSF
              190       200       210       220       230       240

      240       250       260         
pF1KB6 WPPYVELLLRNGIALRHPEDPTRIRLEAFHQ
       :::::::::::::::::::::::::::::::
XP_011 WPPYVELLLRNGIALRHPEDPTRIRLEAFHQ
              250       260       270 

>>XP_016865183 (OMIM: 611502) PREDICTED: centromere prot  (239 aa)
 initn: 1548 init1: 1548 opt: 1548  Z-score: 1199.4  bits: 229.5 E(85289): 4.5e-60
Smith-Waterman score: 1548; 100.0% identity (100.0% similar) in 239 aa overlap (31-269:1-239)

               10        20        30        40        50        60
pF1KB6 MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLSLL
                                     ::::::::::::::::::::::::::::::
XP_016                               MWKDMEECQNKLSLIGTETLTDSNAQLSLL
                                             10        20        30

               70        80        90       100       110       120
pF1KB6 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
               40        50        60        70        80        90

              130       140       150       160       170       180
pF1KB6 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
              100       110       120       130       140       150

              190       200       210       220       230       240
pF1KB6 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
              160       170       180       190       200       210

              250       260         
pF1KB6 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
       :::::::::::::::::::::::::::::
XP_016 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
              220       230         

>>XP_011541839 (OMIM: 611502) PREDICTED: centromere prot  (239 aa)
 initn: 1548 init1: 1548 opt: 1548  Z-score: 1199.4  bits: 229.5 E(85289): 4.5e-60
Smith-Waterman score: 1548; 100.0% identity (100.0% similar) in 239 aa overlap (31-269:1-239)

               10        20        30        40        50        60
pF1KB6 MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSLIGTETLTDSNAQLSLL
                                     ::::::::::::::::::::::::::::::
XP_011                               MWKDMEECQNKLSLIGTETLTDSNAQLSLL
                                             10        20        30

               70        80        90       100       110       120
pF1KB6 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQDLEMVLSTKESKNEKLKE
               40        50        60        70        80        90

              130       140       150       160       170       180
pF1KB6 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFNELKTKMLNIKEYKEKLLSTL
              100       110       120       130       140       150

              190       200       210       220       230       240
pF1KB6 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEILINRLFDVPHDPYVKISDSFWP
              160       170       180       190       200       210

              250       260         
pF1KB6 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
       :::::::::::::::::::::::::::::
XP_011 PYVELLLRNGIALRHPEDPTRIRLEAFHQ
              220       230         




269 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 08:12:46 2016 done: Sat Nov  5 08:12:47 2016
 Total Scan time:  6.430 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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