GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:27:40

Sequence gi568815574f:20479606_20689575 : 209970 bp : 37.95% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +    788   1310  523  2  1   43   41   257 0.886   9.26
 1.02 PlyA +   1612   1617    6                               1.05

 2.00 Prom +   3116   3155   40                              -3.65
 2.01 Init +  11911  12075  165  0  0   73   36   100 0.074   3.09
 2.02 Intr +  12780  13077  298  2  1   37   39   171 0.045   2.62
 2.03 Intr +  38070  38354  285  1  0   42   89   163 0.115   8.19
 2.04 Term +  51919  52865  947  2  2   23   45   288 0.045   9.25
 2.05 PlyA +  52992  52997    6                               1.05

 3.00 Prom +  54255  54294   40                              -3.65
 3.01 Init +  55804  55806    3  0  0  101   81     0 0.209   0.65
 3.02 Intr +  78309  78435  127  2  1   77   70   102 0.366   6.63
 3.03 Intr + 100003 100086   84  2  0   69  116    41 0.519   3.87
 3.04 Intr + 102985 103088  104  2  2  102  100    29 0.851   4.47
 3.05 Intr + 108419 108500   82  1  1   44   95    90 0.975   3.59
 3.06 Term + 109879 109982  104  2  2   81   40   231 0.559  15.06
 3.07 PlyA + 110605 110610    6                               1.05

 4.00 Prom + 115698 115737   40                              -3.65
 4.01 Sngl + 123936 124502  567  2  0   60   38   194 0.703   7.50
 4.02 PlyA + 124611 124616    6                               1.05

 5.03 PlyA - 125173 125168    6                               1.05
 5.02 Term - 136367 135940  428  0  2    8   43   176 0.034  -0.42
 5.01 Init - 138129 137826  304  0  1   65   29   227 0.325  11.98
 5.00 Prom - 138502 138463   40                              -8.65

 6.03 PlyA - 138617 138612    6                               1.05
 6.02 Term - 140288 140127  162  2  0   65   42   101 0.602   0.15
 6.01 Init - 147704 147504  201  2  0   60   86   149 0.573  10.82
 6.00 Prom - 148925 148886   40                              -7.65

 7.00 Prom + 149218 149257   40                              -3.65
 7.01 Init + 162097 162160   64  0  1   88   97    40 0.299   6.26
 7.02 Intr + 164873 165088  216  0  0   25    2   189 0.138   1.55
 7.03 Intr + 165536 165930  395  0  2  -17  103   170 0.215   1.45
 7.04 Intr + 166890 167284  395  2  2   40   15   273 0.065   7.73
 7.05 Intr + 168362 168500  139  2  1   30   55    98 0.085   0.25
 7.06 Term + 168610 169122  513  0  0   85   41   230 0.245  11.36
 7.07 PlyA + 172263 172268    6                               1.05

 8.00 Prom + 181220 181259   40                              -5.25
 8.01 Init + 183512 183786  275  1  2   41   15   233 0.263   7.79
 8.02 Intr + 185293 185353   61  1  1  129   64    19 0.381   1.42
 8.03 Term + 188209 188472  264  0  0   38   43   163 0.109   1.32
 8.04 PlyA + 190504 190509    6                               1.05

 9.00 Prom + 191395 191434   40                              -8.15
 9.01 Sngl + 197146 198021  876  0  0   57   49   265 0.867  15.22
 9.02 PlyA + 198116 198121    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  11911  12132  222  0  0   73   47   169 0.827   6.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815574f:20479606_20689575|GENSCAN_predicted_peptide_1|174_aa
XNTNYIREYYKHLYTNILENLEETDKFLDTYTLPRLNQEEVESLKRPITCSEIEAIINSL
PIKKSPGPDGFTAKFYQRYKEELVPFLLKLFQSTEKEAILPNSFYETSVILIPKPGRDTT
KKENFRPISLKNIDSKILDKILANRIQQHIKKLSTMIKWASSLGRKPGSTYANQ

>gi568815574f:20479606_20689575|GENSCAN_predicted_CDS_1|525_bp
nnaaatacaaactacatcagagaatactataaacacctctacacaaatatactagaaaat
ctagaagaaacggataaattccttgacacatacactctcccaagactaaaccaggaagaa
gttgaatctctgaagagaccaataacatgctctgaaattgaggcaataattaatagttta
ccaatcaaaaaaagtccaggaccagatggattcacagccaaattctaccagaggtacaag
gaggagctggtaccattccttctgaaactattccaatcaacagaaaaagaggcaatcctc
cctaactcattttatgagaccagcgtcatcctgataccaaaacctggcagagacacaaca
aaaaaagagaattttagaccaatatccctgaagaacatcgattcaaaaatcctcgataaa
atactggcaaaccgaatccagcagcacatcaaaaagctatccaccatgatcaagtgggct
tcatccctgggacgcaagcctggttcaacatatgcaaatcaataa

>gi568815574f:20479606_20689575|GENSCAN_predicted_peptide_2|564_aa
MRPPFQTPAPEHILGWKETCCFQGKNPFLAAFITCYLKSPWTLINHQQDPGTTLKSSPGS
GGHRGASFTPPEALGGLEQRETVHLGERKKDNKCICLVIQRILPELVQDHQGGTSMSLQN
HRVTGFGEPPKADTVQIITANSFKISEKPPQRKRDSSPGIYWPLMRKSLATIDLQGAIAV
LILSLTLTAGLPSGITQTNQTHLEYDYLEVFCPPPIQDDGSFSGRGNREEKLETNYKKEN
QLNEALTPFEIQTTIRQYYKHLYANKLENLEEMDKLLKTYTLSRQNQEEVESLNRPIAGS
EIEAIINSLPTKKSPGPDRFTAEFYQRYKKELVPFLLKLFQSIEKEGLLPNSFYEASIIL
IPKPGRDTTKKENFRPISLMNIDAKILNKILAKQIQQHIKKLIHHDQVGFIPGMQGWINI
LKSINVIQHINRTSDKNHVIISIDAEKAFDKIQQPFMLKTLNKLSIDGMYFKIIRAIYDK
PTANIILNGQKLEAFPLKTGTRQGCPFSPLLFNIVLEVLARAIRQEKEIKGILLGKEEVK
LSLFAHDMIVYLENPIISAQNLLS

>gi568815574f:20479606_20689575|GENSCAN_predicted_CDS_2|1695_bp
atgaggcccccattccagaccccagctcctgaacacatcctgggctggaaggaaacctgt
tgctttcaagggaagaacccattcctggcagcattcatcacctgctacctgaagagccct
tggaccttgattaaccatcagcaagatccaggtactacactgaagagcagtcctggtagt
ggaggccacaggggtgcttcttttacaccaccagaagctctgggtggcttagaacaaaga
gagactgttcatttgggagaacgtaagaaagataacaagtgtatctgcctggtaatccag
agaattcttccagaacttgtgcaagaccatcaaggcggcacctctatgagtctgcaaaac
caccgtgttactgggtttggggagccccctaaagcagatacagttcagatcataacagcc
aattcctttaaaatatctgaaaagcctcctcaaagaaagagggattcatcaccaggcatc
tattggccattgatgagaaaaagccttgctactattgaccttcaaggtgcaattgctgtt
ttaattctctcactcactctcactgctgggttgccaagtggcatcacccagacaaatcag
acccatctagaatatgactacctggaagtcttttgccctcctcccattcaggatgatggc
tccttttctgggagaggtaatagagaagagaaactagagacaaattacaaaaaggagaac
cagttaaatgaagccttaacaccattcgaaatacaaactaccatcagacaatactataaa
cacctctatgcaaataaactagaaaatctagaagaaatggataaactcctcaaaacatac
accctctcaagacaaaaccaggaagaagttgaatctctgaatagaccaatagcaggctct
gaaattgaggcaataattaatagtttaccaaccaaaaaaagtccaggaccagatagattc
acagctgaattctaccagaggtacaagaaggagctggtaccattccttctgaaactattc
caatcaatagaaaaagagggactccttcctaactcattttatgaggccagcatcatcctg
ataccaaagcctggcagagacacaacaaaaaaagagaattttagaccaatatccctgatg
aacattgatgcaaaaatcctcaataaaatacttgccaaacaaatccagcagcacatcaaa
aagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggatcaacata
ctcaaatcaataaatgtaatccagcatataaacagaaccagtgacaaaaaccatgtgatt
atctcaatagatgcagaaaaagcctttgacaaaattcaacaacccttcatgctaaaaact
ctcaataaattaagtattgatgggatgtatttcaaaataataagagctatctatgacaaa
cccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaactggc
acaagacaaggatgccctttctcaccactcctattcaacatagtgttggaagttctggcc
agggcaatcaggcaggagaaggaaataaagggtattctattaggaaaagaggaagtcaaa
ttgtccctttttgcacatgacatgattgtatatctagaaaaccccatcatctcagcccaa
aatctccttagctga

>gi568815574f:20479606_20689575|GENSCAN_predicted_peptide_3|167_aa
MSEEREKVHFPSPPSPSPVGPGDCHECCPMNASVTFTQEPRGAGKGGKNRRRGKNENESE
KRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKKDNKADVILKYNADE
ARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDDDEDIDDVSK

>gi568815574f:20479606_20689575|GENSCAN_predicted_CDS_3|504_bp
atgagtgaagaaagagagaaagtgcatttcccttctcctccttctccctctcctgtgggt
cctggtgactgtcatgaatgctgtcctatgaatgcaagtgtgaccttcacccaagaaccc
agaggagctggtaaaggaggtaaaaacaggcgcaggggtaaaaatgagaatgaatctgaa
aaaagagagttggtgtttaaagaggatggacaagagtatgctcaggtaatcaaaatgttg
ggaaatggacgattggaagcattgtgttttgatggtgtaaagaggttatgccatatcaga
gggaaattgagaaaaaaggataacaaagctgatgtaattttaaagtacaatgcagatgaa
gctagaagcctgaaggcatatggcgagcttccagaacatgctaaaatcaatgaaacagac
acatttggtcctggagatgatgatgaaatccagtttgacgatattggagatgatgatgaa
gacattgatgatgtaagtaaataa

>gi568815574f:20479606_20689575|GENSCAN_predicted_peptide_4|188_aa
MSELPLRITTKRIKYLRIQLTMNVKDLFKENSKSQLSKIKEDTNKWKKIPCSWIGRINIM
KIAILPKVIYRFSAIPIKLPMNFFTELEKKTTLKFIQKQKRACIAKTILSKKSKAGGITL
PDFKLYCKATVTKTAWYSYQNRYIDEWNRTKAAEITPHIYNHLIFDKLDKNNQWRKKSHL
INGAGKTG

>gi568815574f:20479606_20689575|GENSCAN_predicted_CDS_4|567_bp
atgagtgaactcccattaagaattaccacaaagagaataaaatacctaagaatccaactt
acaatgaatgtgaaggacctcttcaaggagaacagcaaatcacagctcagcaaaataaaa
gaggacacaaacaagtggaagaaaattccatgctcatggataggaagaatcaatatcatg
aaaattgccatactgcccaaggtaatttacagattcagtgccatccccatcaagctacca
atgaatttcttcacagaattggaaaaaaaaactactttaaagttcatacagaaacaaaaa
agagcctgcattgccaagacaatcctaagcaaaaagagcaaagctggaggcatcacacta
cctgacttcaaactatactgcaaggctacagtaaccaaaacagcatggtactcgtaccaa
aacagatatattgacgaatggaacagaacaaaagctgcagaaataacaccacacatctac
aaccatctgatctttgacaaacttgacaaaaacaatcaatggagaaagaagtcccattta
ataaatggtgccgggaaaactggctag

>gi568815574f:20479606_20689575|GENSCAN_predicted_peptide_5|243_aa
MNQIDAIKNNKGDITTNPTEIQTTIREYYKHLYANKLENLEEVDKFLDTYTLPRLNQEEV
ESLNRPKTGSEMETIINSLATTKSPGPDGLSRILPEVQGGAEENIGNTIQDTGMGKDFMT
KTPNAMATKAKIDKWDLIKLKSFCTAKETTIGVNRQPTKWEKIFATYSSDKGLISRIYNK
LKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAANRHIKNAHHHWPSEKYKSKPQGSTISHQ
LEW

>gi568815574f:20479606_20689575|GENSCAN_predicted_CDS_5|732_bp
atgaatcaaatagatgcaataaaaaataataaaggggatatcaccaccaatcccacagaa
atacaaactaccatcagagaatactataaacacctatatgcaaataaactagaaaatcta
gaagaagtggataaattcctagacacatacaccctcccaagactaaaccaggaagaagtt
gaatccctgaatagaccaaaaacaggctctgaaatggagacaataattaatagcctagca
accacaaaaagtccaggaccagatggactcagtcgaattctaccagaggtacaaggagga
gctgaagaaaacataggcaataccattcaggacacaggcatgggcaaggacttcatgact
aaaacaccaaacgcaatggcaacaaaagccaaaattgacaaatgggatctaattaaacta
aagagcttctgcacagcaaaagaaactaccatcggagtgaacaggcagcctacaaaatgg
gagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatctacaataaa
ctcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcaaaggacatg
aacagacacttctcaaaagaagacatttatgcagccaacagacacattaaaaatgctcac
catcactggccatcagagaaatacaaatcaaaaccacaaggaagtaccatctcacaccag
ttagaatggtga

>gi568815574f:20479606_20689575|GENSCAN_predicted_peptide_6|120_aa
MSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEETNKWKNIPCSWVGRINIV
KMAVLPKECSSLPSMKQSWRENDFDEVREEGIRQSVITNFSKLKEDVEPIANKKKTLTKD

>gi568815574f:20479606_20689575|GENSCAN_predicted_CDS_6|363_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acaagggacgtgaaggacctcttcaaggagaactacaaaccactactcaatgaaataaaa
gaggaaacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtg
aaaatggccgtactgcccaaggaatgcagctccttaccatcaatgaaacaaagctggagg
gagaatgactttgacgaggtgagagaagaaggcatcagacaatcagtaataacaaacttc
tccaagctaaaagaggatgtcgaacccatcgcaaataagaaaaaaaccttgacaaaagat
tag

>gi568815574f:20479606_20689575|GENSCAN_predicted_peptide_7|573_aa
MAFSHGFILVFRMTLYIDSAIACISPPPRWLRGQAATVLVATGQTAKEESHSTSQGKSAP
KVLSDKTSEDSWQEIAPVTLTFHQEGKLLNPKPKYIRIQLLEKDPRWDSNERLGMQSLNR
YREALLEGLKKKVQNNSNANKVSEVIQGKEESPAQFYERLCEAYCMYTPFDPDSPENQCM
INMILVSQSAKNIRRKLQKTGWVCRYEYTSQLLEICYQVFVNRDMPGTKYYRPVQDLHLV
NQATVTLHPMVPNLYTLLEFLPAEDNLFTSLDLKDAFFSIRLAPEGPKLFAFQGEDPGSG
VITQYTWTRLPQGFKYSPTIFGEALAQDPQKFPSRDLGCVLLQYVDDRLLGQPMAVCTWG
IIQGKRPVEHWGKIHKRSARDPAIIRGSVETPKGGSHALQRTPAPDIVPTYSKEEKDFLQ
AEGGQVIEEGGIWLLGRRIAMPQMLGAAVILAVHETIHLGQMSFEKLLGWYFYILHLSAL
AKTVVQQCVTCWQHNARQGPTAPPGIQSYGAAPFEDLQVDFTEMPKHGGNKYLLVLVCTY
SGWVEAYPTRTEKACEVTRMLPRDLITRFGLPL

>gi568815574f:20479606_20689575|GENSCAN_predicted_CDS_7|1722_bp
atggctttttcccacggctttatccttgtatttcgcatgactctctacattgactcagct
atagcttgtattagccccccaccaagatggttgagaggacaggccgcaacagtactagta
gctacgggacagacagccaaggaagaatcccactccaccagccaaggaaagtcagctcct
aaagtcctatctgacaagacatcagaggattcatggcaagaaatagcgccagtgacactc
acctttcatcaagaaggaaagcttctcaatcctaagcccaagtacatacggatccagtta
ctagaaaaagacccccggtgggactcaaatgaaagactgggtatgcaaagcctaaacagg
tacagggaagccctcttggaagggttaaagaagaaagttcagaataactcaaatgctaac
aaggtctctgaagtaattcagggaaaagaagaaagtccagcacaattctatgagagactg
tgtgaggcctattgtatgtatactccctttgatcctgatagtcctgagaatcagtgcatg
attaacatgattttagttagtcaaagcgcaaaaaacattagaaggaagctgcaaaaaaca
ggctgggtttgcaggtatgaatatacttcacagctgttggaaatatgttatcaggtgttt
gtgaacagagatatgccagggaccaagtactacaggccagtacaggatttgcacttggtc
aaccaagctacagtgactttgcatccaatggtacctaacctgtacacattgttagaattc
ctgccagctgaggacaacttattcacctccttggacctgaaagatgctttctttagcatc
agactagcccctgagggcccaaaactgtttgcctttcagggggaggatccagggtcaggt
gtcatcactcagtacacttggacacggctcccccaagggttcaagtactcccccaccatc
tttggggaggcactggctcaagacccccagaagtttccttccagagacctaggctgcgtg
ctgctccagtatgtcgatgaccgcctgctgggacaacccatggcagtctgtacatggggc
attatacaaggaaaaaggcctgttgaacactgggggaaaatacataaaagatcagcaaga
gatcctgcaattattagaggcagtgtggagaccccgaaaggtggcagtcatgcattgcag
aggacaccagcacctgacattgtacctacttattctaaagaagagaaggactttcttcag
gcagaaggagggcaagtgatagaagagggagggatttggttattgggcagaagaatagcc
atgccgcaaatgctaggagccgcagtcatactggctgtgcatgagaccatccacctagga
caaatgtcatttgaaaagttgttaggctggtacttctacatcttgcacctgtcagccctt
gcgaaaacagtggtgcagcagtgtgtcacctgctggcaacacaatgctaggcaaggtcca
acagcccctcctggcatacagtcttatggagcagccccctttgaagatctccaagtagac
ttcaccgagatgcccaaacatggaggcaacaagtatttgctagttctagtgtgtacatac
tctgggtgggtggaggcctatccaacacggactgagaaagcttgtgaagtaacccgcatg
cttccccgagatctcatcactaggtttggactgcccttatga

>gi568815574f:20479606_20689575|GENSCAN_predicted_peptide_8|199_aa
MLVFTPPQVFFGFQCEASNHTMAWLGPHPVAEMKEMTLQDPQPQMMQLPQVTQAPDITWG
LLKKTTQAERILLQTKTPFTPDNLFLTMLSVTLLQEGLILLLDITSNTSLQLSQYLLNTI
GLRGLKLIICKLLQAQILKPVNSSNNNHILAVKKQMGLTAWSIISQVVNQAAVPIHMVPN
PYTLLSQMPPELHASQCWI

>gi568815574f:20479606_20689575|GENSCAN_predicted_CDS_8|600_bp
atgcttgtgttcacaccccctcaggtcttctttggattccagtgtgaagcatcaaaccat
accatggcatggctgggaccccatccggtagcagaaatgaaggaaatgaccctgcaggac
ccgcagccccagatgatgcagcttcctcaggtgacacaggccccagacattacctggggg
ttgctgaagaagacaactcaggctgagcgaatcttgcttcagacaaagacaccatttact
ccagataatttgttcctcactatgctttctgttacgctgcttcaggaaggattaatccta
ttgctggacatcacatccaacacaagtctccaattatctcaatatctccttaacacaatt
ggccttcggggccttaaacttattatctgtaaacttttacaagctcaaattctcaagcct
gtcaactcttccaacaacaaccacatcctggctgtcaaaaaacagatgggtcttactgct
tggtccatcatctcccaagttgttaaccaggcagcggtgccaatccacatggtcccgaac
ccatatactttactctcccaaatgcccccagaactacatgcttctcagtgttggatctaa

>gi568815574f:20479606_20689575|GENSCAN_predicted_peptide_9|291_aa
MEEDLPNKWKTEKKKAEVAILISDKTDSKPKKITRDKEGHYIMAKGSIQQEELAILNIYA
LNTGAPRFIKQALKDLQRDLDSHTIIMGDFNTPPSILERSTRQKVNRDIQDLNSALHQAD
LIDISRILHPKSTEYTFFSAPHCTYSKIAHKIGSKALLSKYKRTEITTNYLSDHRASKLE
LRIKKLTQNHTNTWKLNNLLLYDYWVNNEMKAEIKMFFESNEKKDRMYQNLWDIFKAVCR
GKLIVVNVHKRKKERCKIDTLISPLKELEKQQQTNSKASRRQEITKIKAKL

>gi568815574f:20479606_20689575|GENSCAN_predicted_CDS_9|876_bp
atggaggaagatctaccaaacaaatggaaaacagaaaaaaaaaaagcagaggttgcaatc
ctaatctctgataaaacagactctaaaccaaaaaagatcacaagagacaaagaaggccat
tacataatggcaaagggatcaattcaacaagaagagctagctatcctaaatatatatgca
ctcaatacaggagcacccagattcataaagcaagcccttaaagacctacaaagagactta
gattcccacacaataataatgggagactttaacaccccaccatcaatattagaaagatca
acaagacagaaagttaacagggatatccaggacttgaactcagctctgcaccaagcagac
ctaatagacatcagcagaatcctccaccccaaatcaacagaatatacattcttctctgca
ccacattgtacttattctaaaattgcccacaaaattggaagtaaagcactcctcagcaaa
tataaaagaacagaaatcacaacaaactatctctcagaccacagggcaagcaaattagaa
ctgaggattaagaaactcacacaaaaccacacaaatacatggaaactgaataacctgctc
ctctatgactactgggtaaataacgaaatgaaggcagaaataaagatgttctttgaatcc
aatgagaaaaaggacagaatgtaccagaatctctgggacatatttaaagcagtgtgtaga
ggaaaacttatagtagtaaatgtccacaaaagaaagaaggaaagatgtaaaatcgacaca
ctaatatcaccattaaaagaactagagaagcaacagcaaacaaattcaaaagctagcaga
agacaagaaataactaagatcaaagcaaaactgtag