GENSCAN 1.0	Date run:  8-Nov-116	Time: 12:55:55

Sequence gi568815584r:73960645_74184394 : 223750 bp : 42.14% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    529    731  203  0  2   18   86   259 0.979  15.86
 1.02 Intr +    811    926  116  1  2   72   82   106 0.998   7.57
 1.03 Intr +   1093   1259  167  2  2   96   69   121 0.808   9.76
 1.04 Term +   2326   2355   30  0  0  102   48    19 0.386  -3.82
 1.05 PlyA +   2446   2451    6                               1.05

 2.13 PlyA -   2609   2604    6                               1.05
 2.12 Term -   2842   2813   30  1  0   99   42    20 0.007  -4.62
 2.11 Intr -   9481   9366  116  2  2   98  110    86 0.982  11.05
 2.10 Intr -  11264  11208   57  0  0   74  115    25 0.766   1.74
 2.09 Intr -  12380  12240  141  0  0   99   97   181 0.892  19.50
 2.08 Intr -  14435  14280  156  0  0   38   76    85 0.253   1.36
 2.07 Intr -  16415  16380   36  0  0  125   90    -2 0.261   1.02
 2.06 Intr -  16730  16655   76  2  1  121   81    69 0.366   7.67
 2.05 Intr -  22580  22374  207  2  0    1  107   201 0.631  11.65
 2.04 Intr -  26249  26170   80  0  2   23  109    41 0.660  -1.95
 2.03 Intr -  27387  27242  146  2  2   85  111   201 0.507  21.11
 2.02 Intr -  37677  37503  175  1  1   85    4   103 0.614  -0.32
 2.01 Init -  43021  42997   25  1  1  102   98    30 0.607   5.14
 2.00 Prom -  50443  50404   40                              -5.75

 3.00 Prom +  50746  50785   40                              -6.25
 3.01 Init +  54612  54623   12  2  0  108   92     8 0.685   3.06
 3.02 Intr +  57899  58048  150  1  0   37   47   168 0.533   7.04
 3.03 Intr +  58724  58890  167  1  2   29   72   128 0.557   3.14
 3.04 Intr +  62272  62500  229  1  1   88   78   171 0.306  13.05
 3.05 Intr +  68540  68605   66  1  0   77   97    68 0.524   4.78
 3.06 Intr +  73384  73527  144  0  0   84   95   120 0.995  11.86
 3.07 Intr +  89058  89551  494  2  2   96   34   353 0.785  21.57
 3.08 Intr +  94940  95041  102  2  0   68   61   104 0.868   4.07
 3.09 Intr +  96262  96336   75  1  0   90   86    50 0.836   2.71
 3.10 Intr +  96500  96614  115  2  1   88   70   100 0.932   7.73
 3.11 Term +  96943  96987   45  0  0   99   49    27 0.829  -3.87
 3.12 PlyA +  98042  98047    6                               1.05

 4.16 PlyA -  98513  98508    6                              -0.45
 4.15 Term - 100102  99998  105  1  0  116   43    92 0.994   4.93
 4.14 Intr - 104276 104178   99  2  0  106   93    71 0.989   8.79
 4.13 Intr - 104716 104537  180  1  0   56   79   261 0.935  21.14
 4.12 Intr - 106242 106061  182  1  2  123   61   131 0.935  12.57
 4.11 Intr - 106925 106736  190  2  1   76   89   255 0.948  22.64
 4.10 Intr - 108337 108216  122  2  2   78   17    91 0.847   0.29
 4.09 Intr - 110853 110551  303  1  0   59   88   214 0.902  14.14
 4.08 Intr - 111330 111252   79  0  1  105   62   109 0.940   8.21
 4.07 Intr - 111720 111559  162  0  0   59   56   212 0.971  14.35
 4.06 Intr - 111967 111893   75  1  0   79   74    80 0.956   4.49
 4.05 Intr - 114373 114311   63  1  0  107   89    27 0.855   2.70
 4.04 Intr - 122738 122568  171  2  0   69   75    71 0.789   3.12
 4.03 Intr - 122949 122907   43  2  1   57  110    23 0.983  -1.28
 4.02 Intr - 123333 123237   97  1  1  118   94    33 0.983   5.05
 4.01 Init - 123750 123699   52  0  1  102   44   177 0.964  14.11
 4.00 Prom - 130058 130019   40                              -4.45

 5.00 Prom + 132639 132678   40                              -7.25
 5.01 Init + 137177 137216   40  1  1   29  115    53 0.178   2.50
 5.02 Intr + 140511 140664  154  1  1   46   66   118 0.070   3.61
 5.03 Intr + 165549 165701  153  0  0   66   70    77 0.042   1.97
 5.04 Intr + 181220 181413  194  2  2   74   82   117 0.692   7.91
 5.05 Intr + 200905 201147  243  2  0   -6   61   270 0.439  11.45
 5.06 Term + 204008 204126  119  0  2   65   43   101 0.717   1.02
 5.07 PlyA + 206144 206149    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:73960645_74184394|GENSCAN_predicted_peptide_1|171_aa
WSDADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYV
RPRVALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQ
RHNTALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK

>gi568815584r:73960645_74184394|GENSCAN_predicted_CDS_1|516_bp
tggagtgatgctgaccacacggacttcatcgacacagctggtgccatgctgcagtatgct
gtcagccttctgaagcccactaaggtctcggctcgccagctgcccccaagcgtagccagg
gtggatgccaaaagccgagttctgtttcctcttgggttgggacatgctgctgagtacgtc
aggcctcgggtggcgctcattggggatgcagcccacagagtccatccgcttgcaggacag
ggtgtcaacatgggctttggggatatctccagcttggcccatcacctcagtacggcagcc
ttcaatgggaaggacttaggttccgtgagccacctcacaggttatgaaacagaaagacag
cgtcacaacactgctcttctggctgctacagacttactaaaaaggctctattctaccagt
gcctccccgcttgtgttgctcaggacgtggggcttgcaggccacaaatgcagtgtctcca
ctcaaagaacagattatggcctttgcaagcaaatga

>gi568815584r:73960645_74184394|GENSCAN_predicted_peptide_2|414_aa
MGSFGYEQDRKSREGEVTVGQLLDLSQVHIIAFFVQQASDAPIDNCKEHCAGGVTALSTP
SGGRRSLNQQTWFEGIFLSSMCPINVSASTLYGIMFDAGSTGTRIHVYTFVQKMPGQLPI
LEGEVFDSVKPGLSAFVDQPKQNRPVPATKWIVHQMNGLSLLKGAETVQGLLEVAKDSIP
RSHWKKTPVVLKATAGLRLLPEHKAKALLFEVKEIFRKSPFLVPKGSVSIMDGSDEGILA
WVTVNFLTEGHRNNVTFERGSFRLENFRTSMKLVNPVFYSYLGFGLKAARLATLGALETE
GEVGFEPCYAEVLRVVRGKLHQPEEVQRGSFYAFSYYYDRAVDTDMIDYEKGGILKVEDF
ERKAREVCDNLENFTSGSPFLCMDLSYITALLKDGFGFADSTVLQKVQYTCNKG

>gi568815584r:73960645_74184394|GENSCAN_predicted_CDS_2|1245_bp
atgggcagttttggttatgagcaagatagaaagagcagggagggagaggtaacagttggt
cagctgctagatttatcacaggtacacataattgctttctttgtacaacaggcttcagat
gctcctatagataattgcaaggaacactgcgctgggggtgtgactgccctcagcacccct
tctggtggcagacgcagtttgaaccagcagacttggtttgagggtatcttcctgtcttcc
atgtgccccatcaatgtcagcgccagcaccttgtatggaattatgtttgatgcagggagc
actggaactcgaattcatgtttacacctttgtgcagaaaatgccaggacagcttccaatt
ctagaaggggaagtttttgattctgtgaagccaggactttctgcttttgtagatcaacct
aagcagaatagaccagtgccagccactaaatggatcgttcatcagatgaacgggttatct
cttttgaagggtgctgagaccgttcaagggctcttagaggtggccaaagactcaatcccc
cgaagtcactggaaaaagaccccagtggtcctaaaggcaacagcaggactacgcttactg
ccagaacacaaagccaaggctctgctctttgaggtaaaggagatcttcaggaagtcacct
ttcctggtaccaaagggcagtgttagcatcatggatggatccgacgaaggcatattagct
tgggttactgtgaattttctgacagagggacacaggaacaatgttacttttgaaagaggt
agctttaggctagagaacttcaggaccagcatgaaattagtcaatcctgtattttacagt
tacctgggatttggattgaaagctgcaagactagcaaccctgggagccctggagacagaa
ggggaggtgggctttgagccctgctatgccgaagtgctgagggtggtacgaggaaaactt
caccagccagaggaggtccagagaggttccttctatgctttctcttactattatgaccga
gctgttgacacagacatgattgattatgaaaaggggggtattttaaaagttgaagatttt
gaaagaaaagccagggaagtgtgtgataacttggaaaacttcacctcaggcagtcctttc
ctgtgcatggatctcagctacatcacagccctgttaaaggatggctttggctttgcagac
agcacagtcttacagaaagtccagtatacctgtaacaaaggttaa

>gi568815584r:73960645_74184394|GENSCAN_predicted_peptide_3|532_aa
MASKRCIRDFRSRGGKLKSFQLYATFRKEGCGPVLANGNPGGGRGQEVSATQDLRRGWGI
ASSASRFPWRQSWPGRPRLGNYDSGAPGEAKMPSKGKDKKKGKSKGKDTKKLIKTDESVV
DRAKANASLWEARLEVTELSRIKYRDTSRILAKSNEDLKKKQCKMEKDIMSVLSYLKKQD
QEKDNMIEKLKQQLNETKEKAQEEKDKLEQKYTRQINELEGQFHQKAKEIGMIHTELKAV
RQFQKRKIQVERELDDEINDLLVKEKIMQLVQQRSQIQTLQKKVVNLETALSYMTKEFES
EVLKLQQHAMIENQAGQVEIDKLQHLLQMKDREMNRVKKLAKNILDERTEVERFFLDALH
QVKQQILISRKHYKQIAQAAFNLKMRAACTGRTEYPKIRTFDGREHSTNSVNQDLLEAEK
WTHIEGNVDIGDLTWEQKEKVLRLLFAKMNGCPSRKYNQSSRPPVPDYVVSDSGETKEFG
DESKLQDKIFITQQIAISDSSGEVVLPTIPKEPQESDTVGSQSHYNLEDKGL

>gi568815584r:73960645_74184394|GENSCAN_predicted_CDS_3|1599_bp
atggcctctaagaggtgtattcgggatttcaggagtcggggaggcaagttgaagagcttc
caactttatgcaactttcaggaaagaaggctgcggaccggtattagcaaatggaaatccg
gggggcggtcgtgggcaggaagtatcggccacacaggacctacggcgcgggtggggcatt
gccagctcggcgtcccggttcccttggagacagagctggccagggcggccgcggctgggc
aactacgacagcggagcccctggggaagccaagatgccgtcgaagggaaaggacaaaaag
aaaggcaagagcaaaggcaaagacacgaagaagttaataaaaacagatgaatctgtggtg
gacagagccaaggccaatgcctccctttgggaggccaggttggaagtcacagaactctct
aggattaagtatcgtgatacttcacggatactggcaaaaagtaatgaggacttaaagaaa
aagcaatgtaaaatggagaaagacataatgtcagtattaagttacctgaagaagcaggat
caggagaaagataatatgattgaaaaactgaaacagcaattaaatgaaacaaaggaaaaa
gcccaagaggagaaggataaattggaacaaaagtataccaggcaaattaatgaactagag
ggacagttccatcaaaaagccaaagaaattggcatgattcacacagagctgaaagcagta
agacaattccagaagagaaaaatccaagtggagagagagttagatgatgagatcaatgat
ctgttggttaaggaaaagattatgcaacttgtccagcagagatcacaaatccaaaccctt
cagaagaaggtagtaaacttggagactgctctgagttacatgaccaaagagtttgagagt
gaagttttaaaactgcagcaacacgcaatgatagagaaccaagcaggtcaggtagaaatt
gacaagctgcagcaccttcttcagatgaaggacagggaaatgaatcgtgtgaagaagctg
gccaagaacatactggatgagagaacagaagtggaaagattctttttagatgctctgcac
caagtgaagcaacagatcctaattagcaggaagcattataagcagatagcacaagctgct
ttcaatttaaaaatgagagcagcatgtacaggaagaacagaatatcccaaaatcagaaca
tttgatggcagagagcacagcaccaatagtgtgaatcaggatcttctggaggccgaaaaa
tggacacatattgaaggaaatgtggatattggagatttgacctgggagcagaaggaaaaa
gtattgcgattgctctttgcaaaaatgaatggctgtccttctaggaaatacaaccagagt
tctaggcctccagttccagactatgttgtttctgacagtggggaaacaaaggaatttggg
gatgaaagtaagcttcaagataaaatcttcatcacccagcaaattgcaatatcagactct
tctggtgaagtggtgctacccactattccaaaagaacctcaggagtctgacacagtggga
agtcagagtcattacaacctagaggacaaaggcttataa

>gi568815584r:73960645_74184394|GENSCAN_predicted_peptide_4|640_aa
MAALLAAAAVRARILQAKTTLFGYSVPCRERPLCHCSLPPPYFTIRGDLRYQTSLKRVIE
SGSQSFPCSWPTKDLEYVARFTAGKKQSARNNSAVLIHYIQSENFLYIAELLGNISIHQV
SVSSKVKSSPTWYSASSFSSSVPTVKLFIGGKFVESKSDKWIDIHNPATNEVIGRVPQAT
KAEMDAAIASCKRAFPAWADTSVLSRQQVLLRYQQLIKENLKEIAKLITLEQGKTLADAE
GDVFRGLQVVEHACSVTSLMMGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWM
FPMAMVCGNTFLMKPSERVPGATMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIK
AISFVGSNKAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQ
RCMALSTAVLVGEAKKWLPELVEHAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGT
KEGASILLDGRKIKVKGYENGNFVGPTIISNVKPNMTCYKEEIFGPVLVVLETETLDEAI
QIVNNNPYGNGTAIFTTNGATARKYAHLVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDT
NFYGKQGIQFYTQLKTITSQWKEEDATLSSPAVVMPTMGR

>gi568815584r:73960645_74184394|GENSCAN_predicted_CDS_4|1923_bp
atggcggcgctattggcggcggcggcagtgcgagcccggatcctgcaggcgaaaactact
ctttttggttactctgtcccctgccgtgagcgtccactttgccattgctcccttccccca
ccctacttcactatccgtggtgatctgaggtaccaaacatctttaaaacgggtgatagaa
agtgggagccagtctttcccctgttcatggcctaccaaggatttagagtatgtggcaaga
tttaccgcaggcaagaaacagtctgcaagaaacaacagtgccgttcttattcattacatc
cagtctgagaatttcctctatattgctgagcttttaggtaatattagtattcaccaggtt
tccgtttcttccaaggtgaaatccagtcccacctggtattcagcatcttccttctcttct
tcagtgccaactgtaaagctcttcattggtgggaaattcgttgaatccaaaagtgacaaa
tggatcgatatccacaacccagccaccaatgaggtcattggtcgggtccctcaggccacc
aaggcagaaatggatgcagccattgcttcctgcaaacgtgcttttcctgcatgggcagac
acttcagtattaagccgccagcaggtcttgctccgctatcaacaacttattaaagaaaac
ttgaaagaaattgccaagttaatcacattggaacaagggaagaccctagctgatgctgaa
ggagatgtatttcgaggccttcaggtggttgagcatgcctgtagtgtgacatccctcatg
atgggagagaccatgccatccatcaccaaagacatggacctttattcctaccgtctgcct
ctgggagtgtgtgcaggcattgctccattcaattttcctgccatgatccccctttggatg
tttcccatggccatggtgtgtggaaataccttcctaatgaaaccatctgagcgagtccct
ggagcaactatgcttcttgctaagttgctccaggattctggtgcccctgatggaacatta
aacatcatccatggacagcatgaagctgtaaattttatttgcgatcatccggacatcaaa
gcaatcagctttgtgggatccaacaaggcaggagagtatatcttcgagagaggatcaaga
catggcaagagggttcaagccaatatgggagccaagaaccatggggtagtcatgccagat
gccaataaggaaaataccctgaaccagctggttggggcagcatttggagctgctggtcag
cgctgcatggctctttcaacagcagtccttgtgggagaagccaagaagtggctgccagag
ctggtggagcatgccaaaaacctgagagtcaatgcaggagatcagcctggagctgatctt
ggccctctgatcactccccaggccaaagagcgagtctgtaatctgattgatagtggaaca
aaggagggagcttccatccttcttgatggacgaaaaattaaagtgaaaggctatgaaaat
ggcaactttgttggaccaaccatcatctcgaatgtcaagccaaatatgacctgttacaaa
gaggagatttttggtccagttcttgtggttctggagacagaaacattggatgaagccatc
cagattgtaaataacaacccatatggaaatggaactgccatcttcaccaccaatggagcc
actgctcggaaatatgcccacttggtggatgttggacaggtgggagtgaatgtccccatt
ccagtgcctttgccaatgttctcattcaccggctctcgatcctccttcaggggagacacc
aatttctatggcaaacagggcatccaattctacactcagttaaagaccattacttctcag
tggaaagaagaagatgctactctttcctcacctgctgttgtcatgcctaccatgggccgt
tag

>gi568815584r:73960645_74184394|GENSCAN_predicted_peptide_5|300_aa
MAEIERDDIDMLKELGSLTTANLMEKVRGLQNLAYQLGLDECEYPDRICSGVYSTLSCVF
HPELRMAIIKETPKQKQKVTGIGKDMVKLEPSYIAGGYVKWYTPCGKLVFLQKVKRSSRN
QVLNALMDLGNDLSARGNEDLGFLCNSLANKASLCLMNFKGLAGSGSVMNEAKQFSRSIS
GKEESTVYRGSRKLLTPRTEGESTEELSGGPHKAEVQPSEGKTHGHGNTLPVHCRSSPPD
GSEESLGEGAPPLNCKDCHCQGLHSPVRKLEETNLGNLISPRRIKALTLEVLQLNSLITL

>gi568815584r:73960645_74184394|GENSCAN_predicted_CDS_5|903_bp
atggctgagatagaacgtgatgacatcgacatgttgaaagaactggggagtctcaccacg
gctaatttgatggagaaggttcgaggcctacagaacctagcctatcagctggggctggat
gagtgtgagtaccccgatcgcatttgttcaggggtgtattccaccctgagctgtgtattc
caccctgagctcaggatggctataattaaagaaaccccaaaacaaaaacagaaagtaaca
ggtattggcaaggatatggtgaaattagaaccttcatacattgctggtggctatgtaaaa
tggtatactccctgtgggaaactggtatttcttcaaaaggttaaaagaagttccaggaat
caagttttgaacgcattaatggacttgggaaatgatttgtcagcacgtggaaatgaggac
ttaggtttcttgtgtaacagcttggctaacaaagcaagtttgtgcctcatgaactttaag
ggccttgctgggagtggcagtgtgatgaatgaagcaaagcaattttccaggagcatttca
ggaaaagaagagtcaacggtgtacagaggtagcagaaagctgctaacccctaggactgaa
ggagagtcaacagaggaacttagtggaggtccccacaaggctgaggttcagccctctgaa
gggaaaacacatggccacgggaacactctgccggtgcattgccggagcagcccacctgat
ggcagtgaagaatctttgggggagggagccccaccactgaactgtaaggactgccattgc
caaggccttcactctccggtcaggaaattagaagagactaatctggggaatctgatcagc
ccaagaagaataaaggcactgacactggaagttctacaactaaacagcctgatcacactg
tag