GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:27:37

Sequence gi568815582f:66452716_66665991 : 213276 bp : 47.75% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2404   2453   50  1  2   97  102    32 0.629   3.82
 1.02 Intr +  16887  17150  264  1  0  114  101   375 0.707  38.88
 1.03 Intr +  24845  24995  151  0  1   81   86   272 0.998  25.52
 1.04 Term +  27871  28210  340  1  1   53   55   214 0.419   8.61
 1.05 PlyA +  29566  29571    6                              -0.45

 2.03 PlyA -  29685  29680    6                               1.05
 2.02 Term -  32343  32134  210  0  0   55   53   168 0.565   7.29
 2.01 Init -  33013  32693  321  1  0   78   80   189 0.949  12.44
 2.00 Prom -  37057  37018   40                              -6.16

 3.00 Prom +  37738  37777   40                              -8.46
 3.01 Init +  38326  38667  342  0  0  108  102    66 0.762   5.34
 3.02 Intr +  40247  40414  168  1  0  111   81   170 0.958  18.74
 3.03 Term +  40823  41047  225  1  0   62   37   117 0.351   0.78
 3.04 PlyA +  41901  41906    6                               1.05

 4.00 Prom +  45689  45728   40                              -4.96
 4.01 Sngl +  47809  48720  912  0  0   75   39   284 0.811  18.50
 4.02 PlyA +  49558  49563    6                               1.05

 5.10 PlyA -  49778  49773    6                               1.05
 5.09 Term -  59351  59253   99  2  0   97   49    48 0.765  -0.07
 5.08 Intr -  61096  61016   81  1  0   97  119    42 0.867   8.03
 5.07 Intr -  64500  64421   80  1  2   45   99    51 0.908   1.17
 5.06 Intr -  65162  65074   89  1  2   63   66    98 0.198   4.71
 5.05 Intr -  76352  76279   74  2  2  131   79    18 0.789   3.40
 5.04 Intr -  78754  78665   90  1  0   92   96    54 0.914   6.79
 5.03 Intr -  84302  84249   54  2  0  120  105    48 0.993   8.88
 5.02 Intr -  89238  89164   75  0  0   67   77    87 0.923   5.21
 5.01 Init -  89779  89777    3  1  0   70   66     0 0.035  -4.00
 5.00 Prom -  90092  90053   40                              -8.26

 6.00 Prom +  91293  91332   40                              -0.46
 6.01 Init + 100001 100078   78  1  0   88   81   102 0.957  10.56
 6.02 Intr + 105475 105633  159  0  0   97   89    15 0.806   2.68
 6.03 Intr + 110407 110502   96  0  0   92   98   103 0.958  11.91
 6.04 Term + 110536 110634   99  0  0   67   40     7 0.201  -8.07
 6.05 PlyA + 110716 110721    6                               1.05

 7.00 Prom + 112218 112257   40                              -5.16
 7.01 Init + 113799 114245  447  2  0  105   85   284 0.603  25.77
 7.02 Intr + 119071 119163   93  0  0   13  116    46 0.319   0.06
 7.03 Intr + 124389 124487   99  2  0  105   98    39 0.920   6.91
 7.04 Intr + 126377 126610  234  1  0   71   59   126 0.320   5.89
 7.05 Intr + 126905 127177  273  1  0  -33   85   281 0.315  13.43
 7.06 Intr + 127311 127469  159  2  0   97   84    71 0.993   7.78
 7.07 Intr + 134282 134383  102  1  0  101   89   119 0.999  13.67
 7.08 Term + 135204 135404  201  2  0   76   38   146 0.897   5.79
 7.09 PlyA + 138538 138543    6                               1.05

 8.00 Prom + 146123 146162   40                              -1.96
 8.01 Init + 152091 152237  147  2  0   95  109   141 0.572  16.99
 8.02 Intr + 155594 155749  156  1  0  128   77   135 0.996  16.61
 8.03 Intr + 156720 156815   96  2  0   93   72   210 0.983  20.11
 8.04 Intr + 157168 157288  121  0  1  115  121   196 0.998  25.67
 8.05 Intr + 160178 160255   78  0  0  125   35    50 0.481   2.92
 8.06 Term + 165312 165421  110  1  2  116   49    59 0.344   3.47
 8.07 PlyA + 166545 166550    6                               1.05

 9.04 PlyA - 167891 167886    6                               1.05
 9.03 Term - 169507 169343  165  1  0   69   55   273 0.672  20.02
 9.02 Intr - 170787 170689   99  0  0  102   91    20 0.935   4.01
 9.01 Intr - 183866 183690  177  2  0   81   79   132 0.816  11.72

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  96294  96263   32  1  2  106  103    22 0.832   3.35


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:66452716_66665991|GENSCAN_predicted_peptide_1|268_aa
XNTLSGHYSFTDEEAKVLARYNRTSYFYPTFSESSEHSHLLVSPVLVASAVIGVVIILSC
ITIIVGSIRRDRQARLQRHRHRHHRHHHHHHHHRRRRHREYEHGYVSDEHTYSRSSRRMR
YACSSSEDWPPPLDISSDGDVDATVLRELYPDSPPGYEECVGPGATQLYVPTDAPPPYSL
TDSCPTLDGTSDSGSGHSPGRHQQEQRTPAQGGLHTVSMDTLPPYEAVCGAGPPSGLLPL
PGPDPGPRGSQGSPTPTRAPASGPERIV

>gi568815582f:66452716_66665991|GENSCAN_predicted_CDS_1|807_bp
nnaaacactctgagtggtcattactcttttacagatgaggaagctaaggtactagcacga
tacaaccgcaccagctacttctaccccacattctcagagagctcggagcacagccatctg
ctcgtgtcccccgtgctggtggcgagtgccgtcataggtgtggtcatcatcctctcctgc
atcaccatcattgtgggcagcatccgcagggacaggcaggcccggcttcagcggcaccgc
caccgccaccaccgccaccaccaccaccatcatcaccaccgccggcgtcgacaccgagag
tacgagcacggctacgtgtcggacgagcacacatacagccgctcaagccgcaggatgcgc
tatgcctgcagctcctcagaggactggcccccacccttggacatcagctctgacggggac
gtggatgccacggtgctcagggagctgtacccagattctccaccaggctacgaggagtgt
gtggggccaggggccactcagctgtatgtccccacggacgcaccaccaccctactcgctg
actgattcctgccccacgctggatggcacctccgactcaggcagcggccacagccctggc
cgacaccagcaggagcagaggaccccggcccaaggtggccttcacacggtctccatggac
acccttcccccctacgaggctgtgtgcggggctggccccccatcaggcctgctgccactg
ccgggcccagacccagggccaaggggctcccagggctcacccaccccaacccgggcccca
gcctctggcccagagaggattgtgtga

>gi568815582f:66452716_66665991|GENSCAN_predicted_peptide_2|176_aa
MLVRWSVVAWLRWGRQGLRTCNLGFLGDMLGWHNWAATLGVKICPAPKPRDTRPDLGNQS
WAPESSSGPEDVQCGVKQSRDQDRRFTSSDDEAYCLSTAHAKSLDMQQLLEPFAETWDLT
TPIHGDPMMALVDYHDGVIASTVTPLKTFFWPEEPIWPPQGAGMNILQRAASKNVC

>gi568815582f:66452716_66665991|GENSCAN_predicted_CDS_2|531_bp
atgctggtgagatggtcagtggtggcatggctgaggtggggacggcagggcctgaggacc
tgcaaccttggatttcttggagacatgttgggctggcacaactgggctgccaccctgggg
gtaaagatctgcccagcccccaagcccagagatacccggcctgatctaggcaaccagtcc
tgggctccagagagttcctctggccccgaggacgtgcaatgtggggtgaagcaaagcaga
gaccaggacagaagattcacttcctcagacgatgaagcttactgtctctccaccgctcat
gccaagagcctggacatgcagcagctgctggagccctttgcagagacctgggacctcacc
acacccatacacggggacccaatgatggctcttgtggactatcacgatggcgtcatcgcc
agcacggtgactcccctgaagacttttttctggccagaggagcccatttggcctccacaa
ggggcaggaatgaacattctccaaagggcagcctccaaaaatgtctgctga

>gi568815582f:66452716_66665991|GENSCAN_predicted_peptide_3|244_aa
MSRSQSPGPGEAALGETLLGNIISYYQERAGEGRLDVCRQAALTHRARWLLGRRAPPWLC
LPEEVALALGGCCCGDPSPVPKVSPELVHALEFLELISVNLLLFPWRKEIRSLKMYTGSF
TYWVRSMLSRHKLDAILGRLGYTATLESEFSLVQAISKENVKQMVFKIFLDIFLRSLKGN
QLPGPALAPGPSSGEVVTASGCSRGQPLVSDAVPESRKVTILSQLCPTPGPQSPGQPLDR
KPEA

>gi568815582f:66452716_66665991|GENSCAN_predicted_CDS_3|735_bp
atgagcaggtcccaatccccaggcccaggcgaagctgctctgggtgagaccctcctgggc
aacatcatcagctactaccaggagagagcaggggagggccggctcgatgtctgcaggcaa
gcagccctcacccacagggccaggtggctcctgggcaggagggcccctccatggctctgt
ctgccagaggaagtggcccttgctctgggtggctgctgttgtggggatcccagccctgtc
ccaaaagtcagccctgagctggtgcatgcactagagttcctggagctgatctctgtcaac
ctgcttctgtttccctggaggaaggaaatcaggtccctaaagatgtacactgggagcttt
acctactgggtgcgatctatgctttccagacacaaactggacgccatcctgggcaggctg
ggctacacggccaccttggagtctgagttctcactggtccaggccatcagcaaagagaat
gtcaagcagatggtgttcaagatcttcctggacattttcctgagaagcctgaagggaaac
caactcccaggcccagccctggcccctggcccttcatcgggtgaggtggtcaccgcctca
gggtgcagcagggggcagcccctggtctcggatgcagttcctgagagcagaaaagtcacc
attctcagccagctctgcccgacaccaggtccccaatctccagggcagcccttagaccgg
aagccagaagcatag

>gi568815582f:66452716_66665991|GENSCAN_predicted_peptide_4|303_aa
MAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITLPD
FKLYYKATVTKTAWYWYQNRDIDQRNRAEPSEILPHIYNHLIFDKPDKNRKWGKDSLFNK
WCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKDF
MSKTPKAMATKAKIDKRDLIKLKSFCTAKETTIRVNRQPTEWEKIFAIYLSDKGLISRIY
NELKQIYKKKNKQPHQKVGKGYNRHFSKEDIYAAKRHMKKMLIITGHQRDANQNHNEIPS
HTS

>gi568815582f:66452716_66665991|GENSCAN_predicted_CDS_4|912_bp
atggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cacattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagaccaacggaacagagcagagccctcagaaatattgccgcatatctataaccat
ctgatctttgacaaacctgataaaaacaggaaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaattaattcaagatggattaaagacttaaatgttagacctaaaaccata
aaaacactagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaaccaaagccaaaattgacaaacgggatctcatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacagacaacctaca
gaatgggagaaaatttttgcaatctacttatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagaaaaaaaacaaacaaccccatcaaaaagtgggcaaa
ggatataatagacacttctcgaaagaagacatttatgcagccaaaagacacatgaaaaaa
atgctcatcatcactggccatcagagagatgcaaatcaaaaccacaatgagataccatct
cacaccagttag

>gi568815582f:66452716_66665991|GENSCAN_predicted_peptide_5|214_aa
MICVEGNIASGKTTCLEFFSNATDVEVLTEPVSKWRNVRGHNPLGLMYHDASRWGLTLQT
YVQLTMLDRHTRPQVSSVRLMERSIHSARYIFVENLYRSGKMPEVDYVVLSEWFDWILRN
MDVSVDLIVYLRTNPETCYQRLKKRCREEEKVIPLEYLEAIHHLHEEWLIKGSLFPMAAP
VLVIEADHHMERMLELFEQNRDRILTPENRKHCP

>gi568815582f:66452716_66665991|GENSCAN_predicted_CDS_5|645_bp
atgatctgtgtcgagggcaatattgcaagtgggaagacgacatgcctggaattcttctcc
aacgcgacagacgtcgaggtgttaacggagcctgtgtccaagtggagaaatgtccgtggc
cacaatcctctgggcctgatgtaccacgatgcctctcgctggggtcttacgctacagact
tatgtgcagctcaccatgctggacaggcatactcgtcctcaggtgtcatctgtacggttg
atggagaggtcgattcacagcgcaagatacatttttgtagaaaacctgtatagaagtggg
aagatgccagaagtggactatgtagttctgtcggaatggtttgactggatcttgaggaac
atggacgtgtctgttgatttgatagtttaccttcggaccaatcctgagacttgttaccag
aggttaaagaagagatgcagggaagaggagaaggtcattccgctggaatacctggaagca
attcaccatctccatgaggagtggctcatcaaaggcagccttttccccatggcagcccct
gttctggtgattgaggctgaccaccacatggagaggatgttagaactctttgaacaaaat
cgggatcgaatattaactccagagaatcggaagcattgcccatag

>gi568815582f:66452716_66665991|GENSCAN_predicted_peptide_6|143_aa
MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI
LLYVLRLDRLMKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVLSECKFTW
KTDVRIESYTIFILEIPRPIYNA

>gi568815582f:66452716_66665991|GENSCAN_predicted_CDS_6|432_bp
atggataacgtgcagccgaaaataaaacatcgccccttctgcttcagtgtgaaaggccac
gtgaagatgctgcggctggcactaactgtgacatctatgaccttttttatcatcgcacaa
gcccctgaaccatatattgttatcactggatttgaagtcaccgttatcttatttttcata
cttttatatgtactcagacttgatcgattaatgaagtggttattttggcctttgcttgat
attatcaactcactggtaacaacagtattcatgctcatcgtatctgtgttggcactgata
ccagaaaccacaacattgacagttggtggaggggttttatcagaatgcaaatttacttgg
aaaacagatgtaagaatagaaagctatactatattcatccttgagattcctaggccaata
tacaatgcctag

>gi568815582f:66452716_66665991|GENSCAN_predicted_peptide_7|535_aa
MDPEHAKPESSEAPSGNLKQPETAAALASSGSVVSSVPKAQRNISAKTAPRKHPAVSIRS
AQSAAAARPQGSEGTAPSRKATTRPPPKPTLPPPTPSAHTESKLLNEMAIKERVEGRAKV
PYKFRDSLKRFSFSPTGMLKILRLVSGELAGSTHKAGEGQETSYFAVGFSGNAQEVSQTK
DLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGPKCDHKIRAAAFIENTCFLSLPCVKVA
LYFPALGAAPAELRAVTRCSQPPDPAAERRLTDLGPPGDAGMGPRGQLRAEAAKGAKPEP
APAPPPPGAKPEEDKKDGKEPSDKPQKAVQDHKEPSDKPQKAVQPKHEVGTRRGCRRYRW
ELKDSNKEFWLLGHAEIKIRSLGCLIAAMILLSSLTVHPILRLIITMEISFFSFFILLYS
FAIHRYIPFILWPISDLFNDLIACAFLVGAVVFAVRSRRSMNLHYLLAVILIGAAGVFAF
IDVCLQRNHFRGKKAKKHMLVPPPGKEKGPQQGKGPEPAKPPEPGKPPGPAKGKK

>gi568815582f:66452716_66665991|GENSCAN_predicted_CDS_7|1608_bp
atggatcctgaacacgccaaacctgagtcatccgaggcaccttcagggaacttgaaacaa
ccggagactgccgcagccctggcaagtagcggcagcgtagtgagttctgtacccaaggca
cagcgcaacatctcagcgaagaccgcaccccggaagcaccccgcagtctcaattcgcagt
gcgcagtccgcagccgccgcacgtccccaaggcagtgagggcaccgcaccctcaaggaaa
gccaccacacgcccacccccaaagcccacactcccaccccccacgccctctgcacacact
gaatccaaactcttaaatgagatggcgatcaaagagcgcgtggagggccgagccaaagtc
ccgtacaaattcagggacagcctcaaacgtttctccttctcgcccactggaatgttgaag
atcctgagactggtgagcggagagctggctgggtccacacataaagctggagagggccag
gagacatcatactttgctgtagggttcagtggtaatgcccaagaagtatcccagacaaag
gatcttaccaacagtatcattacagctgtgttcctttcagtagttgccatcttggccatg
caagaaaagaaaagaaggcatttactctatgtcggggggcctaaatgtgaccataaaatt
agggctgctgcttttatcgagaacacctgcttcctctcgttgccttgtgtgaaagtcgcg
ttgtattttcctgcgcttggcgctgcgcccgcggagctcagggccgtgacccggtgctcg
cagccccccgaccccgcagcggagcggcggcttacagacctggggccacctggagacgcc
gggatgggaccgcgagggcagctccgcgcggaggcggcaaagggggccaagccagagcca
gcaccagctccacctccacccggggccaaacccgaggaagacaagaaggacggtaaggag
ccatcggacaaacctcaaaaggcggtgcaggaccataaggagccatcggacaaacctcaa
aaggcggtgcagcccaagcacgaagtgggcacgaggagggggtgtcgccgctaccggtgg
gaattaaaagacagcaataaagagttctggctcttggggcacgctgagatcaagattcgg
agtttgggctgcctaatagctgcaatgatactgttgtcctcactcaccgtgcaccccatc
ttgaggcttatcatcaccatggagatatccttcttcagcttcttcatcttactgtacagc
tttgccattcatagatacatacccttcatcctgtggcccatttctgacctcttcaacgac
ctgattgcttgtgcgttccttgtgggagccgtggtctttgctgtgagaagtcggcgatcc
atgaatctccactacttacttgctgtgatccttattggtgcggctggagtttttgctttt
atcgatgtgtgtcttcaaagaaaccacttcagaggcaagaaggccaaaaagcatatgctg
gttcctcctccaggaaaggaaaaaggaccccagcagggcaagggaccagaacccgccaag
ccaccagaacctggcaagccaccagggccagcaaagggaaagaaatga

>gi568815582f:66452716_66665991|GENSCAN_predicted_peptide_8|235_aa
MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV
ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA
IAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEGLQPFNV
SAKNQHKETKQSLVCIWAADLAVCGPHQPTKLLGLDVGADKIRQTWKKPWILQLH

>gi568815582f:66452716_66665991|GENSCAN_predicted_CDS_8|708_bp
atgtggcccccagaccccgaccccgacccggaccccgagcctgccggcggctcccgtccc
ggccccgcggtccccgggctccgcgccctgctgccggcgcgggctttcctctgctctctc
aaaggccgcctcctgctggccgagtcgggtctctcattcatcacttttatctgctatgtg
gcgtcctcagcatctgccttcctcacagcgcctctgctggagttcctgctggccttgtac
ttcctctttgctgatgccatgcagctgaatgacaagtggcagggcttgtgctggcccatg
atggacttcctgcgctgtgtcaccgcggccctcatctactttgctatctccatcacggcc
atcgccaagtactcggatggggcttccaaagccgctggggtgtttggcttctttgctacc
atcgtgtttgcaactgatttctacctgatctttaacgacgtggccaaattcctcaaacaa
ggggactctgcagatgagaccacagcccacaagacagaaggccttcagccctttaacgtc
tctgccaaaaaccagcacaaggagacaaagcagagccttgtctgtatctgggcagcagac
ctggccgtgtgtggacctcaccagcctaccaagctgttgggcctggacgtgggtgctgat
aaaataagacaaacctggaaaaaaccctggattctgcaacttcactag

>gi568815582f:66452716_66665991|GENSCAN_predicted_peptide_9|146_aa
ILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTD
LVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVRQQ
STNDYIRARTESRDVDSRPEIQRLDT

>gi568815582f:66452716_66665991|GENSCAN_predicted_CDS_9|441_bp
atcttggccctgattgcattcatctgcatagagaccatcatggcatgctccccgtgtgaa
ggcctctacttttttgagtttgtgagctgcagtgcgtttgtggtgactggcgtcttgctg
attatgttcagtctcaacctgcacatgaggatcccccagatcaactggaatctgacagat
ttggtcaacactggactcagcgctttccttttctttattgcttcaatcgtactggctgct
ttaaaccatagagccggagcagaaattgctgccgtgatatttggcttcttggcgactgcg
gcatatgcagtgaacacattcctggcagtgcagaaatggagagtcagcgtccgccagcag
agcaccaatgactacatccgagcccgcacggagtccagggatgtggacagtcgccctgag
atccagcgcctggacacgtga