GENSCAN 1.0	Date run:  6-Nov-116	Time: 00:48:21

Sequence gi568815590f:20097407_20320399 : 222993 bp : 45.44% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7162   7248   87  0  0   59   73    55 0.171   1.27
 1.02 Term +  20229  20585  357  2  0  100   49   141 0.433   5.91
 1.03 PlyA +  22242  22247    6                               1.05

 2.00 Prom +  33387  33426   40                              -1.16
 2.01 Init +  35350  35379   30  0  0   57  106    47 0.511   2.29
 2.02 Term +  40095  40358  264  2  0   68   54   145 0.689   4.61
 2.03 PlyA +  40714  40719    6                               1.05

 3.12 PlyA -  41416  41411    6                               1.05
 3.11 Term -  48470  48357  114  2  0  110   43   139 0.999  10.17
 3.10 Intr -  49134  49060   75  0  0   65   70    59 0.736   1.51
 3.09 Intr -  49985  49852  134  0  2   91   61   225 0.525  20.46
 3.08 Intr -  50316  50197  120  1  0  101   77   186 0.992  19.27
 3.07 Intr -  50664  50601   64  0  1  132   82   -11 0.528   0.99
 3.06 Intr -  52321  52270   52  0  1  109   75     5 0.438   0.21
 3.05 Intr -  53338  53260   79  2  1   98   88    63 0.399   5.91
 3.04 Intr -  58678  58595   84  2  0   92   59    62 0.680   3.49
 3.03 Intr -  59676  59527  150  1  0   26   84    92 0.378   2.73
 3.02 Intr -  64727  64647   81  0  0   90   91    22 0.536   2.31
 3.01 Init -  67538  67463   76  2  1  117  106   100 0.991  15.11
 3.00 Prom -  67742  67703   40                              -7.36

 4.08 PlyA -  69090  69085    6                               1.05
 4.07 Term -  71547  71522   26  1  2   80   42    20 0.285  -5.01
 4.06 Intr -  74088  73999   90  1  0   72  107   112 0.631  11.47
 4.05 Intr -  75722  75630   93  0  0   85  106    75 0.950   8.94
 4.04 Intr -  77038  76955   84  2  0   77   92    41 0.893   3.19
 4.03 Intr -  81087  81029   59  2  2   97   83    29 0.971   1.83
 4.02 Intr -  82078  81715  364  2  1   94   70   278 0.969  20.84
 4.01 Init -  83558  83435  124  2  1   81   79   153 0.948  14.21
 4.00 Prom -  88448  88409   40                              -3.66

 5.00 Prom +  97116  97155   40                              -4.26
 5.01 Init + 100001 100136  136  1  1  101   70   164 0.961  15.20
 5.02 Intr + 107078 107133   56  0  2  126   85    18 0.965   4.00
 5.03 Intr + 112027 112125   99  0  0   93  111    40 0.992   7.11
 5.04 Intr + 112940 113033   94  1  1  104   27   104 0.957   5.44
 5.05 Intr + 113163 113240   78  1  0  109   69    89 0.986   8.62
 5.06 Intr + 113771 113910  140  0  2    5   78    88 0.906  -0.32
 5.07 Intr + 114246 114347  102  2  0   64   78    32 0.498   0.17
 5.08 Intr + 114696 114793   98  2  2   54  111    77 0.985   5.41
 5.09 Intr + 115376 115499  124  2  1   71  107   107 0.998  11.49
 5.10 Intr + 117412 117562  151  0  1   56  115    30 0.801   2.24
 5.11 Intr + 119007 119089   83  1  2   80   84    60 0.940   4.16
 5.12 Intr + 120747 120876  130  2  1  103   90   154 0.992  17.37
 5.13 Intr + 127383 127474   92  1  2    9  115    33 0.011  -2.19
 5.14 Term + 133346 133609  264  1  0   13   41   197 0.280   3.01
 5.15 PlyA + 142760 142765    6                               1.05

 6.06 PlyA - 142790 142785    6                               1.05
 6.05 Term - 152957 152316  642  2  0   94   55  1399 0.999 131.37
 6.04 Intr - 156179 155376  804  2  0  115   78  1212 0.992 114.55
 6.03 Intr - 157825 157431  395  2  2   90  103   477 0.019  43.77
 6.02 Intr - 169904 169761  144  0  0   72   78   102 0.845   7.85
 6.01 Init - 172470 172383   88  0  1   63   72   114 0.660   8.10
 6.00 Prom - 179796 179757   40                              -4.06

 7.03 PlyA - 181559 181554    6                               1.05
 7.02 Term - 185246 185137  110  0  2   53   43   110 0.248   1.67
 7.01 Init - 190351 190303   49  1  1   86   89    30 0.276   2.01
 7.00 Prom - 191192 191153   40                              -3.26

 8.04 PlyA - 191538 191533    6                               1.05
 8.03 Term - 195102 195040   63  0  0   83   48    54 0.278  -1.21
 8.02 Intr - 197004 196949   56  1  2   97   64    43 0.195   1.50
 8.01 Intr - 206061 205972   90  1  0  127   59    53 0.244   6.27

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 157775 157431  345  2  0  107  103   508 0.878  51.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:20097407_20320399|GENSCAN_predicted_peptide_1|147_aa
SIQYLSPAVSDHICTQLLQDLSTSSGIFAEMPLEWEKLLLPQIAGEEREFLIFLIEAHGA
SVLEIQYTSVMALEKRTQDPQDPMARDDKSLWVYRHFPYVLRHVCMHLLAYFSILKASCY
VLVLKQPIIVKTNFCTKRMNRQLRKSE

>gi568815590f:20097407_20320399|GENSCAN_predicted_CDS_1|444_bp
tctattcagtatctgagcccagcagtcagtgaccacatctgcacccagctcctgcaggac
ctcagcacctcctcaggaatctttgcagaaatgcctcttgaatgggagaagctgctgctc
ccccaaattgctggggaagaaagggagttcctgatctttcttattgaggctcatggagct
tctgtcctggagattcagtatacttcagtaatggctctggagaagagaactcaggatcct
caagacccaatggctcgtgatgataaaagcctttgggtctaccgacattttccctacgtg
ctcagacatgtctgcatgcatttattggcatatttttccatactcaaagcaagttgctat
gtgttagtactaaagcaacccataatagtaaaaacgaatttctgcaccaagagaatgaat
cggcagctgagaaagtcagagtga

>gi568815590f:20097407_20320399|GENSCAN_predicted_peptide_2|97_aa
MTLAVAMAVWLSEELLEDILQQKMKMHQEQESEFRKLESSLGEQHKKTQPKAHAGGSENE
SRGHRAGNKTYRQMTCYDQKQIVRGLHKSVSGLENNG

>gi568815590f:20097407_20320399|GENSCAN_predicted_CDS_2|294_bp
atgacactggcagtggctatggctgtctggctatctgaggaattattggaggacatactc
caacagaagatgaaaatgcaccaagaacaagaaagtgaattcaggaaactggagtccagt
ttaggagagcaacacaagaaaacccagcccaaagcccatgcaggtggctctgagaatgaa
tccagaggacacagggctggaaacaaaacgtaccgacagatgacctgctatgatcagaaa
caaatagtcaggggtcttcataaatcagttagtggacttgagaacaatgggtga

>gi568815590f:20097407_20320399|GENSCAN_predicted_peptide_3|342_aa
MGVAILEPTLPIWMMQTMCSPKWQLVQCPSTVPAMAQVGPDVAWPPTLEGASGTSAYRIS
YAHRCSSPAPVFPPFLTTKKGVQAAGLWWSITSVPNIAFAIRGPVPVLKYWVISSKALAK
ELRLGDCIAQGLAFLPASVSYLIGTNLFGVLANKMGRWLCSLIGMLVVGTSLLCVPLAHN
IFGLIGPNAGLGLAIGMVDSSMMPIMGHLVDLRHTSVYGSVYAIADVAFCMGFAIGPSTG
GAIVKAIGFPWLMVITGVINIVYAPLCYYLRSPPAKEEKLHKHPEGLMGLGYRQRLLKGT
KEDMKAILSQDCPMETRMYATQKPTKEFPLGEDSDEEPDHEE

>gi568815590f:20097407_20320399|GENSCAN_predicted_CDS_3|1029_bp
atgggggtggccatcctggagcccacactgcccatctggatgatgcagaccatgtgctcc
cccaagtggcagctggtgcagtgcccctcaactgtgccagccatggctcaagtgggccca
gatgtggcctggcctcccactctggagggtgcaagtgggacatctgcttaccggattagt
tacgctcaccgatgtagcagtcctgcacctgttttcccgcctttcttgaccacaaagaaa
ggagtccaggctgctggattatggtggtccattaccagcgtgcccaacattgcctttgcg
atcaggggcccagttccagtgttaaagtactgggtcatcagttctaaggccctcgccaag
gagctgaggcttggagattgtattgcacagggtctagctttcttgcctgccagtgtgtcc
tacctcattggcaccaacctctttggtgtgttggccaacaagatgggtcggtggctgtgt
tccctaatcgggatgctggtagtaggtaccagcttgctctgtgttcctctggctcacaat
atttttggtctcattggccccaatgcagggcttggccttgccataggcatggtggattct
tctatgatgcccatcatggggcacctggtggatctacgccacacctcggtgtatgggagt
gtctacgccatcgctgatgtggctttttgcatgggctttgctataggtccatccaccggt
ggtgccattgtaaaggccatcggttttccctggctcatggtcatcactggggtcatcaac
atcgtctatgctccactctgctactacctgcggagccccccggcaaaggaagagaagctt
cacaaacatcctgagggcctgatgggtttgggataccgacagaggctgctcaagggaaca
aaagaagacatgaaggctattctgagtcaggactgccccatggagacccggatgtatgca
acccagaagcccacgaaggaatttcctctgggggaggacagtgatgaggagcctgaccat
gaggagtag

>gi568815590f:20097407_20320399|GENSCAN_predicted_peptide_4|279_aa
MLRTILDAPQRLLKEGRASRQLVLVVVFVALLLDNMLFTVVVPIVPTFLYDMEFKEVNSS
LHLGHAGSSPHALASPAFSTIFSFFNNNTVAVEESVPSGIAWMNDTASTIPPPATEAISA
HKNNCLQGTGFLEEEITRVGVLFASKAVMQLLVNPFVGPLTNRIGYHIPMFAGFVIMFLS
TVMFAFSGTYTLLFVARTLQGIGSSFSSVAGLGMLASVYTDDHERGRAMGTALGGLALGL
LVGAPFGSVMYEFVGKSAPFLILAFLALLDGDLLSIDDS

>gi568815590f:20097407_20320399|GENSCAN_predicted_CDS_4|840_bp
atgctccggaccattctggatgctccccagcggttgctgaaggaggggagagcgtcccgg
cagctggtgctggtggtggtattcgtcgctttgctcctggacaacatgctgtttactgtg
gtggtgccaattgtgcccaccttcctatatgacatggagttcaaagaagtcaactcttct
ctgcacctcggccatgccggaagttccccacatgccctcgcctctcctgccttttccacc
atcttctccttcttcaacaacaacaccgtggctgttgaagaaagcgtacctagtggaata
gcatggatgaatgacactgccagcaccatcccacctccagccactgaagccatctcagct
cataaaaacaactgcttgcaaggcacaggtttcttggaggaagagattacccgggtcggg
gttctgtttgcttcaaaggctgtgatgcaacttctggtcaacccattcgtgggccctctc
accaacaggattggatatcatatccccatgtttgctggctttgttatcatgtttctctcc
acagttatgtttgctttttctgggacctatactctactctttgtggcccgaacccttcaa
ggcattggatcttcattttcatctgttgcaggtcttggaatgctggccagtgtctacact
gatgaccatgagagaggacgagccatgggaactgctctggggggcctggccttggggttg
ctggtgggagctccctttggaagtgtaatgtacgagtttgttgggaagtctgcacccttc
ctcatcctggccttcctggcactactggatggagatttgttatccattgatgattcttga

>gi568815590f:20097407_20320399|GENSCAN_predicted_peptide_5|548_aa
MALRAMRGIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPRLTYKTVSGVNGPLVIL
DHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDILR
TPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGM
NSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFAAMGVNMET
ARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDM
SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDD
ITHPIPDLTGYITEGQIYVDRQLHNRQYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFL
QKFERNFIAQVALKCGPSTKEASLVIYLLDVHCSDKTWKVQPCPIRERVPFPRGEAPGKA
ALGITPRQQLLMPERGSPPSPAVAAPLDPEAQPPLLSLVTDNAYRLCHQLFQSKNYLSAQ
CPKKRERA

>gi568815590f:20097407_20320399|GENSCAN_predicted_CDS_5|1647_bp
atggcgctgcgggcgatgcgggggattgtcaacggggccgcacccgagctacccgtgccc
accggtgggccggcggtgggagctcgggagcaggcgctggcagtcagtcggaactacctc
tcccagcctcgcctcacatacaagacagtatctggagtcaatggtccactagtgatctta
gatcatgttaagtttcccaggtatgctgaaattgtccatttgaccttaccggatggcaca
aagagaagtgggcaagttctggaagttagtggttccaaggcagtagttcaggtatttgaa
gggacttcaggtatagatgctaagaaaacgtcctgtgagtttactggggatattctccga
acaccggtgtctgaggatatgcttggtcgggtattcaatggatcgggaaaacccattgac
agaggtcctgttgtactggccgaagacttccttgatatcatgggtcagccaatcaaccct
caatgtcgaatctacccagaggaaatgattcagactggcatttcggccatcgatgggatg
aacagtattgctagggggcagaaaattcctatcttctctgctgctgggctaccacacaat
gagattgcagctcagatctgtcgccaggctggtttggtaaagaaatccaaagatgtagta
gactacagtgaggaaaattttgcaattgtatttgctgctatgggtgtaaacatggaaact
gcccggttcttcaaatctgactttgaagaaaatggctcaatggacaatgtctgcctcttt
ttgaacttggctaatgacccaaccattgagcgaattatcactcctcgcctggctctaacc
acagctgaatttctggcgtaccaatgtgagaaacatgtattggttattctaacagacatg
agttcttatgctgaagcacttcgagaggtttcagcagccagggaagaggtacctggtcga
cgaggttttccaggttacatgtatacagatttagccacgatatatgaacgcgctgggcga
gtggaagggagaaacggctcgattactcaaatccctattctaaccatgcctaatgatgat
atcactcaccccatcccagacttgactggctacattacagaggggcagatctatgtggac
agacagctgcacaacagacagtatgcgtgctatgctattggaaaggatgtgcaagccatg
aaagctgtcgttggagaagaagcccttacctcagatgatcttctctacttggaatttctg
cagaagtttgagaggaacttcattgctcaggtcgcactcaagtgtggccctagcaccaag
gaagcttcattagtgatttacctactagatgttcattgttcagataaaacttggaaagtg
cagccctgtcccatcagggagcgagtgcccttcccccgaggagaagctccagggaaagca
gccctgggcatcacccccaggcagcagctgctcatgcccgagagagggagcccaccttcc
ccagctgtggctgctcccttagaccccgaggcccagccaccactgctcagtttggtcact
gacaatgcctacagattgtgtcaccagttattccagagcaagaattacctctcagctcag
tgcccgaaaaaacgagagagggcttga

>gi568815590f:20097407_20320399|GENSCAN_predicted_peptide_6|690_aa
MEDPGLESEEDHSVDLGTVKEDQNFGERGAPNMETRSTLLGSQHPGDKEAGGKEHKDDAR
NQGTRQPRQHPPPGCLRAFPRPCPALPHPQPRVTMGSVSSLISGHSFHSKHCRASQYKLR
KSSHLKKLNRYSDGLLRFGFSQDSGHGKSSSKMGKSEDFFYIKVSQKARGSHHPDYTALS
SGDLGGQAGVDFDPSTPPKLMPFSNQLEMGSEKGAVRPTAFKPVLPRSGAILHSSPESAS
HQLHPAPPDKPKEQELKPGLCSGALSDSGRNSMSSLPTHSTSSSYQLDPLVTPVGPTSRF
GGSAHNITQGIVLQDSNMMSLKALSFSDGGSKLGHSNKADKGPSCVRSPISTDECSIQEL
EQKLLEREGALQKLQRSFEEKELASSLAYEERPRRCRDELEGPEPKGGNKLKQASQKSQR
AQQVLHLQVLQLQQEKRQLRQELESLMKEQDLLETKLRSYEREKTSFGPALEETQWEVCQ
KSGEISLLKQQLKESQTEVNAKASEILGLKAQLKDTRGKLEGLELRTQDLEGALRTKGLE
LEVCENELQRKKNEAELLREKVNLLEQELQELRAQAALARDMGPPTFPEDVPALQRELER
LRAELREERQGHDQMSSGFQHERLVWKEEKEKVIQYQKQLQQSYVAMYQRNQRLEKALQQ
LARGDSAGEPLEVDLEGADIPYEDIIATEI

>gi568815590f:20097407_20320399|GENSCAN_predicted_CDS_6|2073_bp
atggaagaccctggtctagagagtgaagaggaccacagtgtggacctggggacagtgaag
gaagatcagaattttggagagaggggagcccccaacatggagaccaggtctacactcttg
ggctctcagcaccctggggacaaagaagcaggaggaaaagaacacaaggacgatgccaga
aaccaggggacccgacagcccagacagcatcctccaccagggtgcctgagagcctttcca
agaccctgcccggccctgccccatcctcagccccgagtcaccatgggcagcgtcagtagc
ctcatctccggccacagcttccacagcaagcactgccgggcttcgcagtacaagctgcgc
aagtcctcccacctcaagaagctcaaccggtattccgacgggctgctgaggtttggcttc
tcccaggactccggtcacggcaagtccagctccaaaatgggcaagagcgaagacttcttc
tacatcaaggtcagccagaaagcccggggctcccatcacccagattacacggcactgtcc
agcggggatttagggggccaggctggggtggactttgacccgtccacaccccccaagctc
atgcccttctccaatcagctagaaatgggctccgagaagggtgcagtgaggcccacagcc
ttcaagcctgtgctgccacggtcaggagccatcctgcactcctccccggagagtgccagc
caccagctgcaccccgcccctccagacaagcccaaggagcaggagctgaagcctggcctg
tgctctggggcgctgtcagactccggccggaactccatgtccagcctgcccacacacagc
accagcagcagctaccagctggacccgctggtcacacccgtgggacccacaagccgtttt
gggggctccgcccacaacatcacccagggcatcgtcctccaggacagcaacatgatgagc
ctgaaggctctgtccttctccgacggaggtagcaagctgggccactcgaacaaggcagac
aagggcccctcgtgtgtccgctcccccatctccacggacgagtgcagcatccaggagctg
gagcagaagctgttggagagggagggcgccctccagaagctgcagcgcagctttgaggag
aaggagcttgcctccagcctggcctacgaggagcggccgcggcgctgcagggacgagctg
gagggcccggagcccaaaggcggcaacaagctcaagcaggcctcgcagaagagccagcgc
gcgcagcaggtcctgcacctgcaggtactgcagcttcagcaggagaagcggcagctccgg
caggagctcgagagcctcatgaaggagcaggacctgctggagaccaagctcaggtcctac
gagagggagaagaccagcttcggccccgcgctggaggagacccagtgggaggtgtgccag
aagtcaggcgagatctccctcctgaagcagcagctgaaggagtcccagacggaggtgaac
gccaaggctagcgagatcctgggtctcaaggcacagctgaaggacacgcggggcaagctg
gagggcctggagctgaggacccaggacctggagggcgccctgcgcaccaagggcctggag
ctggaggtctgtgagaatgagctgcagcgcaagaagaacgaggcggagctgctgcgggag
aaggtgaacctgctggagcaggagctgcaggagctgcgggcccaggccgccctggcccgc
gacatggggccgcccaccttccccgaggacgtccctgccctgcagcgggagctggagcgg
ctgcgggccgagctgcgggaggagcggcaaggccatgaccagatgtcctcgggcttccag
catgagcggctcgtgtggaaggaggagaaggagaaggtgattcagtaccagaaacagctg
cagcagagctacgtggccatgtaccagcggaaccagcgcctggagaaggccctgcagcag
ctggcacgtggggacagcgccggggagcccttggaggttgacctggaaggggctgacatc
ccctacgaggacatcatagccactgagatctga

>gi568815590f:20097407_20320399|GENSCAN_predicted_peptide_7|52_aa
MGLHHFGQAGLELLISGQPLTTENYLAFVNNAKVEKPKHNLNAKGKTTVQSN

>gi568815590f:20097407_20320399|GENSCAN_predicted_CDS_7|159_bp
atggggttgcaccattttggtcaggctggtctcgaactcctgatctcaggacagcccctt
acaacagagaattacctagcctttgtcaataatgccaaggtggagaagcccaagcacaac
ttaaatgcgaaaggaaaaactacagttcaaagcaattag

>gi568815590f:20097407_20320399|GENSCAN_predicted_peptide_8|69_aa
XGVRLFPAPMLILAGTSVLGDTGVGGEEVGGPQLALLKGCAAGWWLVGQGSVTAKAVLVA
VANSRYFQN

>gi568815590f:20097407_20320399|GENSCAN_predicted_CDS_8|210_bp
nacggggttcgtctattcccagcaccgatgctgatcctggcggggacgtcagtgttaggt
gacactggtgtcggaggtgaagaagtgggaggcccgcagctggccctgctcaaaggctgt
gcagccggctggtggctggtggggcagggttctgtgacagcaaaggctgtgctggtcgca
gttgctaacagtcggtactttcaaaactga