GENSCAN 1.0	Date run:  7-Jul-118	Time: 15:57:53

Sequence gi568815597r:12468343_12717348 : 249006 bp : 47.88% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -   2233   2228    6                               1.05
 1.04 Term -   6144   6023  122  1  2   95   41    37 0.041  -1.66
 1.03 Intr -  17613  17521   93  1  0   95   52    74 0.214   4.44
 1.02 Intr -  20465  20433   33  0  0   58  107    41 0.223   1.19
 1.01 Init -  28581  28422  160  0  1   65   61   272 0.745  22.19
 1.00 Prom -  29769  29730   40                              -2.36

 2.00 Prom +  32321  32360   40                              -5.66
 2.01 Init +  34617  34636   20  2  2   76   50    28 0.134  -3.90
 2.02 Intr +  38511  38751  241  0  1  124  101   345 0.984  36.95
 2.03 Term +  40551  40682  132  2  0  134   48   154 0.999  14.09
 2.04 PlyA +  41664  41669    6                               1.05

 3.15 PlyA -  41997  41992    6                               1.05
 3.14 Term -  45035  44884  152  0  2   -4   42   154 0.020  -0.33
 3.13 Intr -  52927  52874   54  2  0   94   89    27 0.573   2.35
 3.12 Intr -  59161  59101   61  1  1   60   84    40 0.039  -0.89
 3.11 Intr -  64383  64102  282  0  0   35   67   135 0.085   3.72
 3.10 Intr -  81186  81151   36  0  0   98   78    26 0.054   1.06
 3.09 Intr -  85727  85678   50  0  2  117   73    22 0.221   2.00
 3.08 Intr - 102088 101888  201  2  0   55  105   103 0.696   7.96
 3.07 Intr - 102725 102634   92  1  2   86   89   -63 0.175  -6.76
 3.06 Intr - 104511 104386  126  2  0   88   86    74 0.844   6.99
 3.05 Intr - 110614 110376  239  1  2   97   82   442 0.990  40.91
 3.04 Intr - 111070 110951  120  1  0  131   82   235 0.999  27.89
 3.03 Intr - 112324 112181  144  1  0   89   66   253 0.968  23.68
 3.02 Intr - 127749 127644  106  2  1   70   76    21 0.050  -0.68
 3.01 Init - 135262 135183   80  1  2   71   97    26 0.183   2.35
 3.00 Prom - 139124 139085   40                              -4.26

 4.09 PlyA - 139847 139842    6                               1.05
 4.08 Term - 139970 139849  122  0  2   83   48   138 0.902   7.94
 4.07 Intr - 140712 140613  100  0  1   35   63    65 0.500  -1.62
 4.06 Intr - 148961 148812  150  2  0   58   76   277 0.334  23.86
 4.05 Intr - 150489 150387  103  2  1   64  100    77 0.292   6.68
 4.04 Intr - 151184 151120   65  2  2  113   66    22 0.344   0.02
 4.03 Intr - 151632 151585   48  0  0   82   35    86 0.334   1.58
 4.02 Intr - 162683 162600   84  2  0   42  116    40 0.004   2.22
 4.01 Init - 167968 167933   36  1  0   83   97    -8 0.022  -0.38
 4.00 Prom - 172156 172117   40                              -4.26

 5.00 Prom + 174838 174877   40                              -6.36
 5.01 Init + 176205 176372  168  2  0   92   97   151 0.972  13.94
 5.02 Intr + 182781 182997  217  2  1   89   82   120 0.511   9.58
 5.03 Intr + 193449 193512   64  1  1  114   92    36 0.375   4.38
 5.04 Term + 197619 198393  775  0  1  104   44   551 0.845  45.16
 5.05 PlyA + 198644 198649    6                               1.05

 6.00 Prom + 214236 214275   40                              -3.56
 6.01 Init + 215097 215172   76  2  1   62   78    43 0.368   2.06
 6.02 Intr + 217045 217182  138  2  0   67   82    84 0.672   6.14
 6.03 Intr + 222879 222897   19  1  1   87   94    12 0.290  -2.63
 6.04 Term + 224561 224711  151  2  1   41   38   172 0.324   4.88
 6.05 PlyA + 225882 225887    6                               1.05

 7.03 PlyA - 227678 227673    6                               1.05
 7.02 Term - 238779 238676  104  1  2   88   33    82 0.426   1.14
 7.01 Init - 244754 244673   82  2  1   81  116    20 0.538   5.24

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:12468343_12717348|GENSCAN_predicted_peptide_1|135_aa
MRGEECPLDLDLDLDLDLDLDLAQATGWDSAEALTRATQLSAARRNLLCYGFQDISQGPK
YTISGRRQDTSWQLGGTLQCLYKGYISAWCCDGQPDLGDPDLHNNIVVRLSWWESDRSAL
DSSKSPTEKESDSTI

>gi568815597r:12468343_12717348|GENSCAN_predicted_CDS_1|408_bp
atgcgaggggaagaatgccccctggacctggacctggacctggacctggacctggacctg
gacctggcccaggccacaggctgggattctgcagaggctctaactcgggccactcagctg
tcggcggcccggaggaatctgctttgttatggctttcaggatatttcacaaggaccgaaa
tacaccatctctggaaggaggcaggacacgagctggcagcttggtggtacccttcagtgc
ctctacaaggggtacatttctgcctggtgctgcgacggtcaacctgacctaggggacccc
gacctacataataatattgttgtgagattgtcctggtgggagtcagacagatcagccctc
gacagttccaagagccccactgaaaaggaatctgattctacaatttaa

>gi568815597r:12468343_12717348|GENSCAN_predicted_peptide_2|130_aa
MGKLWANFIAVENIDSYCVLISSKAVYFLKSGDYVDREAIFLEVKYDDLYHCLVSKDHGK
VYVQVTKKAVSTSSGVSIPGPSHQKPMVHVKSEVLAVKLSQEINYAKSLYYEQQLMLRLS
ENREQLELDS

>gi568815597r:12468343_12717348|GENSCAN_predicted_CDS_2|393_bp
atggggaagctctgggcaaacttcatcgctgtggagaacattgacagctactgcgtgctc
atctcctccaaagctgtttacttcctgaaaagtggagactacgtggatcgagaagccatt
ttcctagaagtcaaatacgatgacctctaccactgccttgtctccaaagaccatgggaag
gtgtatgtgcaggtgaccaagaaagccgtgagcacgagcagtggagtgtccatccccggc
ccctcccaccagaagcccatggtccatgtgaaatctgaggtccttgctgtcaagttgtca
caagaaataaactacgcaaagagcctctactatgaacagcagcttatgttaagactcagc
gaaaaccgagagcagctggagctggactcctga

>gi568815597r:12468343_12717348|GENSCAN_predicted_peptide_3|580_aa
MRTSAPAEVQGPGFQTGFRSTLEAPRSWGNLGPAEERVWLVGPAAGGCWHLASHLQLRVQ
PQIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNN
AAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIP
GAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKP
ETVARRTVEAVQLNQALLLLPWTMHALVILKRKVSPQVPGWPLLSCNMHSQESQLLPWLL
GHEWARTLQFESPNSLRALSVPGPCEGLGIRDEIPAMKAPTGLTSKRVGTTPGLAGEASE
LRLYEEKPEAKEGISPWRHTDYKLERPCRICQRERETEDKSRQRNVEEPDWLSFPAFIFL
PCWMLPALEHWTTSSSAFGLLDLYQWFDRDSRAIGHRQKATLSASLLLRFGDSDWPPCSS
ACRRPIVELRLRPPATAAMEAMEMRLFGVELFCWICTLSSTQAPTPTDRPSVQLHVAGQE
YSQAARFHCTFTVINVKWVLNVARQTYHASVAYSLSRYPT

>gi568815597r:12468343_12717348|GENSCAN_predicted_CDS_3|1743_bp
atgcggacctcagcgccagctgaggttcaaggtccaggttttcaaactgggttccggagc
accctagaggccccaagaagctggggtaacctcgggccggcggaggagcgcgtgtggctc
gtaggccctgcggccggaggctgctggcaccttgcatctcatttacagctccgggttcag
ccacagattgttctctggggccggactgagaaatgcctgaaggagacgacggaggagatc
cggcagatgggcactgagtgccattacttcatctgtgatgtgggcaaccgggaggaggtg
taccagacggccaaggccgtccgggagaaggtgggtgacatcaccatcctggtgaacaat
gccgccgtggtccatgggaagagcctaatggacagtgatgatgatgccctcctcaagtcc
caacacatcaacaccctgggccagttctggaccaccaaggccttcctgccgcgtatgctg
gagctgcagaatggccacatcgtgtgcctcaactccgtgctggcactgtctgccatcccc
ggtgccatcgactactgcacatccaaagcgtcagccttcgccttcatggagagcctgacc
ctggggctgctggactgtccgggagtcagcgccaccacagtgctgcccttccacaccagc
accgagatgttccagggcatgagagtcaggtttcccaacctctttcccccactgaagccg
gagacggtggcccggaggacagtggaagctgtgcagctcaaccaggccctcctcctcctc
ccatggacaatgcatgccctcgttatcttgaaaaggaaggtaagcccccaagtgccaggc
tggcccctgctctcatgcaacatgcactcccaggaaagccaacttctgccctggctgctg
ggacatgagtgggccaggacccttcagtttgagtcaccaaacagcctgagggccctctct
gtgccgggcccatgtgagggcctggggatcagagatgaaatacccgccatgaaggccccc
acaggcttgacaagtaaacgggtggggactacaccagggcttgctggggaagcgtcggaa
ctccggttgtacgaggagaagcctgaagccaaggagggaatcagcccgtggagacacaca
gactacaagttggagaggccttgccgcatctgtcaaagggaaagggagaccgaggataaa
agcaggcagaggaacgtggaagaaccagactggctgagttttccagccttcatctttctc
ccgtgctggatgcttcctgcccttgaacattggactacaagttcttcagcttttggactc
ttggacttataccagtggtttgacagggactctcgggccattggccacagacagaaggct
acactgtcggcttccctacttttgaggtttggggactcggactggcctccttgctcctcg
gcttgtagacggcctattgtggaacttcgccttcgtccaccagctacagcggcgatggag
gcgatggaaatgcgcctatttggagttgagctgttctgctggatctgcactctctccagc
acgcaggctcctactcccaccgaccgcccttctgtgcagctacatgtggccggacaagaa
tacagccaggctgcccgattccactgtacattcacggtcatcaacgtcaaatgggtcctt
aatgtcgcccggcaaacataccatgcttctgtggcctattccctttcccgttaccctaca
tga

>gi568815597r:12468343_12717348|GENSCAN_predicted_peptide_4|235_aa
MDTVPILQQETKVGPEKAPQVPALQNWQPSPQFSDSPSLKIFPGFFAGLADTSRCWWLFT
QKEDPPLQNLSPELGLCSKVLLPSGFPLSIVRHLGQAFKSPLYVNTEEVRAKMIYLVVKA
AVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKNEGDAFQSYFVKRLLGYC
VHVGQHFDRALDQLEVIFMTVVLYMSVVPYTIGNIRDCGNIQGDFKKVVENGIKG

>gi568815597r:12468343_12717348|GENSCAN_predicted_CDS_4|708_bp
atggacactgtacccattttacagcaggaaaccaaggtgggcccggaaaaggcaccacaa
gttcctgctctgcagaactggcagcccagcccccagttttcagactctcctagcctgaag
atctttccaggcttcttcgcaggcctggcggacaccagccgctgctggtggcttttcacc
cagaaggaagatcctcccctgcagaacctctccccagaactaggtctttgcagcaaagtc
ctgctccccagcggcttccccctaagcatcgtgaggcacttgggtcaggcttttaaaagt
ccactctacgtgaacacagaagaggtccgggcaaagatgatctatctggtggtgaaagca
gccgtcggactggtgctgcccgccaagctgcgggacctgtcgcgggagaacgtcctcatc
accggcggcgggagaggcatcgggcgtcagctcgcccgcgagttcgcggagcgcggcgcc
agaaagaatgaaggagatgcttttcagtcctactttgtcaaacgacttctggggtattgt
gtccatgtgggccagcactttgacagggcccttgaccaactggaagtaatattcatgacc
gtggtactctacatgtctgtggtaccatacacgattggtaatatacgtgactgtggtaat
atacaaggggacttcaaaaaggtggtggaaaatggaattaaaggatga

>gi568815597r:12468343_12717348|GENSCAN_predicted_peptide_5|407_aa
MAVPWLVLLLALPIFFLGVFVWAVFEHFLTTDIPATLQHPAKLRFLHCIFLYLVTLGNIF
EKLGICSMPKFIRFLHDSVRIKKDPELVVTDLRFGTIPVRLFQPKAASSRPRRGIIFYHG
GATVFGSLDCYHGLCNYLARETESVLLMIGYRKLPDHHSPALFQDCMNASIHFLKALETY
GVDPSRVVVCGESVGGAAVAAITQALVGRSDLPRIRAQVLIYPVVQAFCLQLPSFQQNQN
VPLLSRKFMVTSLCNYLAIDLSWRDAILNGTCVPPDVWRKYEKWLSPDNIPKKFKNRGYQ
PWSPGPFNEAAYLEAKHMLDVENSPLIADDEVIAQLPEAFLVSCENDILRDDSLLYKKRL
EDQGVRVTWYHLYDGFHGSIIFFDKKALSFPCSLKIVNAVVSYIKGI

>gi568815597r:12468343_12717348|GENSCAN_predicted_CDS_5|1224_bp
atggctgtcccctggctagtgctactcttggcattgcccatctttttcctgggggtcttt
gtctgggctgtctttgagcacttcctcaccacggatatccctgctaccttgcagcatcct
gccaagttgagattcctgcattgcatattcctctacctggtcactttggggaatatattt
gagaagctgggaatttgctccatgcccaaatttattcgttttttacatgatagcgtgaga
attaaaaaggaccctgaacttgtggtgaccgacctgcgttttgggacgatacccgtgagg
ctgttccagccgaaggcagcatcctccagaccccggcgaggcatcatcttctaccatgga
ggggccacagtatttgggagcctggattgttaccatggcctgtgcaattatctggcccgg
gagactgaatctgtacttctgatgattgggtaccgcaagcttcctgaccaccattcccct
gcccttttccaagactgcatgaatgcctccattcacttcctgaaggccctggaaacctat
ggggtggacccctccagggttgtggtctgtggagaaagcgtcggaggtgcagcggtggcc
gccatcacccaggccttggtgggcagatcagatcttccccggatccgggctcaggttctg
atttatccagttgtccaggcattctgtttgcagttgccatcctttcagcagaaccaaaat
gtcccattactttcccggaagttcatggtgacttctctgtgtaactatctggccattgac
ctctcctggcgtgacgccatcttgaacggcacttgtgtacccccagacgtctggaggaag
tacgagaagtggctcagccctgacaacatccccaagaaatttaagaacagaggctaccaa
ccctggtctcccggcccttttaatgaagctgcctatctagaagccaaacatatgctggat
gtagaaaattcacccctgatagcagatgatgaggtcatcgctcagcttcctgaggccttc
ctggtgagctgtgagaatgacatactccgtgatgacagcttgctctataagaagcgcttg
gaggaccagggggtccgcgtgacatggtaccacctgtatgatggttttcacggatccatt
atcttttttgataagaaggctctctctttcccatgttccctgaagattgtgaatgctgta
gtcagttatataaagggcatatga

>gi568815597r:12468343_12717348|GENSCAN_predicted_peptide_6|127_aa
MVMPIQEESWGPCLIKVTLDSTAGGDDSVKIKKGSKLVVISLHFRMTLMRLFQLKGDIIF
YHRVGREFGSLGRLLGNSLAIIKFPLTTKSAMKKTEDNNTLVFSVDVKANKYQIAGMSHC
AWLNILK

>gi568815597r:12468343_12717348|GENSCAN_predicted_CDS_6|384_bp
atggtaatgcctatccaggaggagtcgtggggaccctgcctcatcaaagtgacccttgac
tcaactgctggaggagatgacagcgtgaaaataaagaagggctctaaactggtggtgatc
agcctgcattttaggatgacactcatgaggctgttccagctcaagggagacatcatcttc
taccacagagtgggcagggagtttggaagcctgggaaggcttctggggaacagccttgct
atcattaagttcccgctgaccaccaagtctgccatgaagaagacagaagacaacaacaca
cttgtgttctctgtggatgttaaagccaacaagtatcagattgcaggcatgagccactgt
gcctggctgaatattcttaaataa

>gi568815597r:12468343_12717348|GENSCAN_predicted_peptide_7|61_aa
MATKVCTWTEEKTLQELVKYFLVGWDQDWVLVNWDHLIRGEFDKDPSVNQESCPQCGAFM
L

>gi568815597r:12468343_12717348|GENSCAN_predicted_CDS_7|186_bp
atggccactaaagtctgcacatggaccgaggaaaagacactgcaggagctggtaaagtat
ttccttgttggttgggaccaagactgggtattagtgaattgggaccatttaatccgggga
gaatttgataaagaccccagtgtcaaccaggaatcttgcccccaatgtggagcttttatg
ctgtag