GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:37:23

Sequence gi568815586f:119079313_119293855 : 214543 bp : 44.85% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  10399  10551  153  0  0  -41   48   261 0.796   7.12
 1.02 PlyA +  12712  12717    6                               1.05

 2.00 Prom +  14779  14818   40                              -5.26
 2.01 Init +  21493  21500    8  0  2   68   86     0 0.117  -1.72
 2.02 Intr +  22924  23070  147  1  0  111   94    56 0.058   7.85
 2.03 Intr +  34966  35052   87  1  0  109   94    85 0.977  10.29
 2.04 Intr +  37625  37696   72  2  0   93   72    80 0.754   5.42
 2.05 Intr +  40393  40599  207  1  0  -35   82   160 0.420   1.29
 2.06 Intr +  40938  40964   27  0  0  142  110    13 0.786   6.13
 2.07 Intr +  46069  46167   99  1  0  111   91    32 0.716   5.03
 2.08 Intr +  51366  51522  157  0  1   98   86    52 0.158   6.01
 2.09 Intr +  65979  66373  395  2  2  133   86   151 0.167  12.85
 2.10 Intr +  71705  71908  204  2  0   84  113    61 0.046   6.52
 2.11 Intr +  74248  74337   90  1  0   90   86    43 0.046   3.41
 2.12 Intr +  74931  75071  141  0  0  106   94   123 0.997  14.17
 2.13 Term +  77183  77486  304  2  1  128   42   239 0.994  17.94
 2.14 PlyA +  78860  78865    6                               1.05

 3.00 Prom +  88102  88141   40                              -4.26
 3.01 Init + 100001 100367  367  1  1  121  119   166 0.970  20.19
 3.02 Intr + 107713 107776   64  2  1  123  100    68 0.835   9.28
 3.03 Term + 114387 114546  160  0  1   76   50   142 0.720   6.61
 3.04 PlyA + 114831 114836    6                              -3.44

 4.00 Prom + 115073 115112   40                              -5.76
 4.01 Init + 115538 116250  713  1  2   97   -2   576 0.469  43.88
 4.02 Intr + 134365 134429   65  1  2   93   96    30 0.061   2.66
 4.03 Intr + 138434 138532   99  0  0   84   93     4 0.062   0.58
 4.04 Intr + 153404 153540  137  0  2   68   85    55 0.289   3.49
 4.05 Term + 154431 154484   54  2  0  117   37    37 0.274  -0.94
 4.06 PlyA + 157047 157052    6                               1.05

 5.00 Prom + 157699 157738   40                              -2.96
 5.01 Init + 173293 173404  112  0  1   71   68    81 0.132   4.86
 5.02 Intr + 185929 186056  128  2  2   87   77    21 0.010   1.30
 5.03 Intr + 187946 188078  133  1  1  115   55    33 0.036   2.92
 5.04 Intr + 207231 207375  145  1  1   55  109   115 0.040   9.64
 5.05 Intr + 211922 212111  190  2  1   75  101    52 0.011   4.79

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  27281  26796  486  2  0   60   39   210 0.931   9.37
S.002 Init +  71418  71465   48  2  0   91   80    30 0.865   3.47
S.003 Intr +  71705  71872  168  1  0   84   86   133 0.940  12.84
S.004 Intr - 205548 205460   89  2  2  116  110    42 0.840   8.81


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:119079313_119293855|GENSCAN_predicted_peptide_1|50_aa
TTLSIHPAIILNIIIIIIILTIITMTIIISNIITIITITIIIIKHILNIY

>gi568815586f:119079313_119293855|GENSCAN_predicted_CDS_1|153_bp
accaccctctctattcatcctgccatcatcctcaatatcatcatcatcatcatcatcctc
accattattaccatgactatcatcatcagtaacattatcaccatcatcaccatcaccatc
atcatcatcaaacatatattgaacatttattag

>gi568815586f:119079313_119293855|GENSCAN_predicted_peptide_2|645_aa
MERTEPQNNPVVPAQDGPSEKLGQHLATEPLGTNSWERDKTCRELGATRGHSASHDKDLT
PPPSSRGKKKKKKSTRKKRRRSSSYSPSPVKKKKKKSSKKHKRRSKSSTCGSWLSHDDDG
DDEDEEEEECTTREREDEMENGGGERQKTLSTFSLSSLIQDRFTDSFGGGLEHRSFSKKR
RHRSRSRPRKSHRHRHHRCPSRSQSSESRPSSCESRHRGRSPEEGQKSRRRHSRRCSKTL
CKDSPEAQSSRPPSQPLQMLGYLSARGVCIMTVNISWLFRNSPWAQRSAVSNGSFCFQIT
GSGSAADLFTKTASPLTTSRGRSQEYDSGNDTSSPPSTQTSSARSRGQEKGSPSGGLSKS
RELNSGNTSDSGNSFTTSSPQNKGAMLENLSPTSRGRESRGFQSPCLECAEVKKSSLVPS
TARSSPMKGCSRSSSYASTRSSSHSSRSPNPRASPRYTQSRSTSSEKSYSSKSGKRSPPS
RSSRSRRSPSYSRYSPSRERDPKYSEKDSQQRERERARRRRRSYSPMRKRRRDSPSHLEA
RRITSARKRPIPYYRPSPSSSGSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRT
SSSSSSRSPSPGSRSRSRSRSRSRSRSRSQSRSYSSADSYSSTRR

>gi568815586f:119079313_119293855|GENSCAN_predicted_CDS_2|1938_bp
atggaaaggacagagccccagaataaccccgttgtcccagctcaggatggaccctcagaa
aagctgggtcagcatctggccaccgagcccttgggcaccaacagttgggagagagacaag
acctgtcgggaactgggtgccaccagaggacacagtgcctctcatgacaaagacttgaca
ccaccaccttcctccaggggaaagaagaaaaagaagaaatccactcggaagaagagaagg
aggtcctcatcctatagcccatcgcctgtcaagaaaaagaagaagaaaagttccaagaaa
cacaagcgacgcagtaagagttccacatgtggaagctggctgtctcatgatgatgacggt
gatgatgaggatgaggaggaggaggaatgcacaacaagggagagagaagatgagatggag
aatggaggaggggaaaggcagaagactctctctacgttctccttatccagcctcatccag
gacagatttactgacagttttgggggaggattggagcaccggtcattctccaagaagaga
aggcacagatctcgaagccggccccgaaagtctcaccgccaccgccatcaccgctgcccc
tcgcggtcccagagctcggagtcccgcccctcaagctgtgagagcaggcaccgcggccgg
tcccctgaggaagggcagaagtcccgccgaaggcactcccgccgctgctccaagaccctc
tgcaaggacagccctgaggcccagtccagtcgcccgcccagtcaacccctccagatgctt
ggctacctgtcagccaggggtgtatgcatcatgacggtaaacatttcttggttatttaga
aacagcccatgggcccagcgctcagcagtgtccaacgggtctttttgctttcagatcact
gggtcggggtctgctgctgacctctttaccaaaacagccagcccgctcaccacctcgcga
ggacgttcccaggagtacgactcaggaaatgacacgtcctcgccaccctccacgcaaacc
agctcagccaggtctcggggccaggagaaggggagccccagtgggggcttgagcaagagc
cgggagctcaacagtggcaacacctctgattcagggaactccttcaccacctcctcaccc
cagaacaagggggccatgttggagaatctctcccccaccagcaggggcagagagtcaagg
ggatttcagtcaccgtgtctggaatgtgccgaagtgaagaagtccagtttggtcccatcc
acagcccggagctcacccatgaaagggtgttcccgcagctcctcctatgccagcacccga
tcctccagtcactcgtcccgatccccaaatcccagggcttcccccaggtacacccaaagc
cgatccacctcttctgaaaaaagctattcctccaagtctggcaagaggagcccgcccagc
agaagctctaggtcccgccgcagccctagctactcccgctacagccccagcagggagcgg
gatcccaaatacagtgagaaggactcgcagcagcgggagcgcgagcgagcgcgtcggaga
cgtcggtcctactcgcctatgagaaagcgccggagagactccccgagccacctggaggcc
cggaggataaccagtgcccggaaacgccccatcccctactatcggcccagcccctcctca
tccggcagcctcagcagcacctcctcctggtacagcagcagcagtagccgctcggccagc
cgcagctactcccggagccggagtcggagccggagccggagacggagccggacccgcacg
agcagcagctctagctcccgcagccctagtccgggctcccgcagccggagccggagcagg
agccggagccggagccggagcaggagccagagccggagctacagctcagcagacagctac
tccagcacgaggcgctaa

>gi568815586f:119079313_119293855|GENSCAN_predicted_peptide_3|196_aa
MADGQMPFSCHYPSRLRRDPFRDSPLSSRLLDDGFGMDPFPDDLTASWPDWALPRLSSAW
PGTLRSGMVPRGPTATARFGVPAEGRTPPPFPGEPWKVCVNVHSFKPEELMVKTKDGYVE
VSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPVTVFASLSPEGLLIIEAPQVPPYSTFGES
SFNNELPQDSQEVTCT

>gi568815586f:119079313_119293855|GENSCAN_predicted_CDS_3|591_bp
atggctgacggtcagatgcccttctcctgccactacccaagccgcctgcgccgagacccc
ttccgggactctcccctctcctctcgcctgctggatgatggctttggcatggaccccttc
ccagacgacttgacagcctcttggcccgactgggctctgcctcgtctctcctccgcctgg
ccaggcaccctaaggtcgggcatggtgccccggggccccactgccaccgccaggtttggg
gtgcctgccgagggcaggacccccccacccttccctggggagccctggaaagtgtgtgtg
aatgtgcacagcttcaagccagaggagttgatggtgaagaccaaagatggatacgtggag
gtgtctggcaaacatgaagagaaacagcaagaaggtggcattgtttctaagaacttcaca
aagaaaatccagcttcctgcagaggtggatcctgtgacagtatttgcctcactttcccca
gagggtctgctgatcatcgaagctccccaggtccctccttactcaacatttggagagagc
agtttcaacaacgagcttccccaggacagccaggaagtcacctgtacctga

>gi568815586f:119079313_119293855|GENSCAN_predicted_peptide_4|355_aa
MPKGGRKGGHKGWARQYRSPEEIDVQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS
DESEDEEDDYQQNRKGVEGLFNIENPNQVAQTTKKVTQLYLDGPKELSRREREEIEKQKA
KERYMKMHLAGKTEQAKADLARWPSSGNSGRRLPGRRKRKGKQKMMPHCQENECSRSPCI
SNRDPWEEMPGTWAALPGPLLCLAHPVPWRRRNSPSWPGAPHGLGPPLHFGTEIVWGMEH
NTTGSKLKQTRDEGTSKQAAISSYTRGSQDRLHNHQCTCHWIIHTYFPPLPDSHPHGFHV
VLALSHFMSVITYQGTALLNVGSASNAYISSTTNRHSHNFEFELFYLWLLCRGKE

>gi568815586f:119079313_119293855|GENSCAN_predicted_CDS_4|1068_bp
atgcctaaaggagggagaaagggaggccacaaaggctgggcgaggcagtataggagccct
gaggagatcgacgtacagctgcaggctgagaagcagaaggccagggaagaagaggagcaa
aaagaaggtggagatggggctgcaggtgaccccaaaaaggagaagaaatctctagactca
gatgagagtgaggatgaagaagatgactaccagcaaaaccgcaaaggcgttgaagggctc
ttcaacatcgagaaccccaaccaggtggcacagacaaccaaaaaggtcacacaactgtat
ctggatgggccaaaggagctttcgaggagagaacgagaagagattgagaagcagaaggca
aaagagcgttacatgaaaatgcacttggccgggaagacagagcaagccaaggctgacctg
gcccgctggccatcatccggaaacagcgggaggaggctgcccggaagaaggaagaggaaa
ggaaagcaaaagatgatgccacattgtcaggaaaacgaatgcagtcgctctccctgtata
agtaaccgcgacccatgggaggagatgccggggacctgggccgcgctgccaggacctctg
ctgtgtctcgcccaccctgtgccctggcgccgccgcaacagcccctcgtggccaggagcc
ccccatggcctggggcctcctcttcattttggcacagaaattgtttgggggatggaacat
aatacaactggatctaagcttaagcaaacacgtgatgagggaacaagtaaacaggcagct
atctcctcttatacccggggctcccaagacagactgcataaccatcaatgcacctgtcac
tggatcatccacacctacttccctcccttaccagactctcatcctcatgggttccatgtt
gttcttgctctctcccatttcatgtccgtaatcacttaccaaggcacagccctgctgaat
gtaggttcagcatccaatgcttacataagcagcaccaccaaccggcacagtcacaacttt
gagtttgaactgttctacctctggcttctttgtcgtggaaaagaataa

>gi568815586f:119079313_119293855|GENSCAN_predicted_peptide_5|236_aa
MDIAVITVSSVVTVSSLQVTSLVEDMDPEEENRTAGCLIIIASKPQRDTISCQSEWLASK
TKKITDVDEVAEKREGLYLLVRMLCIPAAPAPAVAKRSQGTAQAIASEGASPKSWQLSCG
VGPAGITSKVMGDAENFTHGQRKLQLIKALPMDSGENSEGAFSHSTESRLFTRSAAALDS
HRSTNPIVNCTCEGSRLHAPYENLVPDDLSPSPITPRSDCLVVGKQTQGSHGLCIM

>gi568815586f:119079313_119293855|GENSCAN_predicted_CDS_5|708_bp
atggacattgctgttatcacagtgagctcagtggtgacagtgtcatcactccaagtgact
tcactggttgaagacatggatccagaagaggagaacaggacagccggatgcttgataata
attgcctcaaaaccacaacgagataccatctcatgccagtcagaatggctagcatcaaaa
actaaaaaaataacagatgttgatgaggttgcagagaaaagagaaggcttatacctgttg
gtcaggatgctctgcatcccagctgctccagctccagctgtggctaaaaggagccaaggt
acagctcaggccattgcttcagagggtgcaagccccaagtcttggcagctttcatgtggt
gttgggcctgcaggaatcaccagcaaagtgatgggggatgctgaaaattttacccacggg
cagaggaagcttcaactcatcaaagccttgccaatggacagtggagaaaacagtgagggt
gccttctcacactcaacagagtcccgcttattcaccagatcagccgcagcattagattct
catagaagcacaaaccctattgtgaactgcacatgcgagggatctaggttgcatgctcct
tatgagaatctagtgccggatgatctgtcaccatctcccatcacccccagatcagactgt
ctagttgtaggaaaacaaactcagggctcccacggactctgcattatg